Conserved Protein Domain Family
RbbA

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COG1131: RbbA (This model is not part of the current CDD release)
Ribosome-associated ATPase or ATPase component of an ABC-type multidrug transport system [Translation, ribosomal structure and biogenesis, Defense mechanisms]
Statistics
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PSSM-Id: 512431
Aligned: 819 rows
Threshold Bit Score: 121.458
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_171705735   11 DAVISARALTK-RFlvkrT-P--VDAVTGLDLDVAQSE-LVAFLGPNGAGKSTSLRMLTTLLPPTSGRARVA--GHDIAT 83  
WP_118277175    1 mkLLKMEEVYF-AY----D-T--EWNLKDISFSIHDNEgCILLSGKNGAGKSTLLNVLCGFLPADEGKITN--------- 63  
WP_014184520    6 EQVVLMEGISSiEHflfpG-KtpRRVLDDISLLIRKGE-VWGISGTLLFEIKLLLEIIANIRPYDKGKCVLierG--MMR 81  
WP_096430711  245 rVVFETKNIEY-RF----KeN--NIGIHDLSFKEESGK-MVGIIGSSGAGKTTLLNVLNGSESPSNGTVEIN--GYNIVT 314 
WP_005809981    1 mNLIEAKGLRK-RF----R-S--REVVKGIDMEIQQGE-ILALIGTNGAGKSTTLALLLGILPTDAGKITRW-------R 64  
WP_066205987  234 PISFEANNINY-FF----G-K--KHGLHDINIAEEGGN-MVALMGASGSGKSTLLNVLNGTYKPKMGEVLIN--GIDIHK 302 
WP_005930880   21 ETALETAGLTY-VF----P-D--GNGIKNIAFQVKRGE-IYALYGGHHAGKSVLLQTIIGTLRPQAGTLQLF--Gn-I-- 86  
WP_129890465   76 siriDAIELKK-AGn---N-K--VILLNDISLVIPPRK-FVAVVGGSGAGKSTLMDALNGLRPAQQGTVLYN--GQDYYR 145 
QNM12576        7 KQSVLMEHVASmEFyqkdN-EqpVQVFQDLNFEALEGE-IWAIIGNKAFEVRLFLEIVANARPYKDGRCVLnetG--MMR 82  
WP_306644153  250 KIVFRVENVSY-YFk--rG-N--KQALHQLNIIEENGS-LIGIMGGSGSGKSTLLNVMNGNYTPTYGQVTIN--GIDIHH 320 
WP_171705735   84 EPAAVRRRIGYIGQGTSGGHNQRVRDELLSQGA-FYG---LPSREAARRADSLLESLDLAPLAKRPV-----SGLSGGQK 154 
WP_118277175   64 -----DMKIGYLPFEHPLYPHLSVLENLRYYYRsFRG---KNLNLQDEEVQQVLEMLSI-DYLQQRI-----DQCSSGQA 129 
WP_014184520   82 RKRVILNHVFYIGSSDMLYKNMNVLEFLMFATA-KFK---INKVLLQEEIFEFIIAIGLGHISLTSN-----YKLTKEEK 152 
WP_096430711  315 DKSQLEGVVGHVSQDDLLIESLTVFENLYFNAK-LCFd-kYSTFQLIRIVLNLLKDLGLYDARNLKVgnpldKKISGGQR 392 
WP_005809981   65 --EDYRAHVGVQLQATPFFEGYTAEENLRLFAA-LYH---V--KLDKKQIDAKLAECNLQEARKTLA-----SRLSGGQQ 131 
WP_066205987  303 EPEKVKGVIGYVPQDDLLIEELTVYENLYFAAK-LSFa-kSTPEEVEKIIMRTIENLGLYSVKDLKVgnpleKTISGGQR 380 
WP_005930880   87 DYQKERRRIGFVPQKPVTIGSLSPADMLRYFSS-VFG---TTE------I-HILDILHLNLKEKKAV-----RRLPLSTQ 150 
WP_129890465  146 NLAAFSAQLGYVPQDDIVHRDLTVYRALYYAAR-MRLpndFTEEQIAQRIHEVLEDVEMSERRDLLV-----SKLSGGQR 219 
QNM12576       83 KKRLILPHVYYIGSTNMMFENMSVLEYLTFITA-KEP---GSIDERKHQIAKDLLDVNLGYLSEREI-----STLTPPEK 153 
WP_306644153  321 SGDQLEGVIGYVAQDDLLIEELSVFQNLFYNAK-LCFa-dKTDDEISALVDQTLQQLGLYEARELKVgspldKTISGGQR 398 
WP_171705735  155 RRLDIALGLIHSPALLFLDEPSTGLDPQSRANLWEHIRELReQ-HGTTVFVTTH-YLEEADQYAERVLVMDQ-GRVIADA 231 
WP_118277175  130 QKAGIACILLSNADLIIMDEPFVALDAKSSEKLCAWIQKK--K-QKQTFLITSH-TTSDILDIVDRLLVLDG-QQLALDS 204 
WP_014184520  153 ALIILIVAAYSESLIIVFNLPEYQWDEVLINAMAKIADFIR-E-REKTLIMGTQ-NCLLIEKACTHTAILGN-GSLIYSG 228 
WP_096430711  393 KRLNIALELIREPSVLFLDEPTSGLSSRDSAKIMDLLKNLA-L-KGKLIFVVIHqPSSEIFKMFDRLLILDTgGYLIFNG 470 
WP_005809981  132 KRLAIAVTTIHNPDLIILDEPASGLDPRARQEIRRMIQQLA-K-NKVTVLFSSH-DMEEVSRIANRIILMHD-GRIVAQG 207 
WP_066205987  381 KRLNIGLELLREPSVMFVDEPTSGLSSQDSENVIDLLRQLT-Y-SGKLIFVVIHqPSSDIYKMFDKLVVLDVgGYPVYYG 458 
WP_005930880  151 RLVNLAVALLGNPDMIILDDPFSGLDKGECEHLLSVLNYLH-EiNHTTLLISGQ-DYTLLSRLASKYGVMAD-GKLLCEL 227 
WP_129890465  220 KRVSIALELLANPSVFFLDEPTSGLDPGLDRKMMFLLRRLA-D-RGRTIVLVTH-ATNNIN-TCDYVCFLAQgGRLAYFG 295 
QNM12576      154 SVVELMAGYYTESKLIIWNLARLYYDEKCILAIQTICQELQ-R-QKRTLLFSSF-DYKMIEACATHISPLYD-GRFLCNS 229 
WP_306644153  399 KRLNIALELIREPSVLFVDEPTSGLSSRDSENIMDLLKELT-L-RGKLIFVVIHqPSSDIFKMFDKLFLLDQgGYPIYYG 476 
WP_171705735  232 DAATLKAELAGDVLRVRV---EgagsgsgsaglgsarAGSG------SVgsagagsggvgsgsaalreltlgaagpvvge 302 
WP_118277175  205 KEEK--E------------------------------------------------------------------------- 209 
WP_014184520  229 TVNNFRRLYDK--VEIiIqdsNvld----------ikEKLAq-----GLpnyny-------------------------- 265 
WP_096430711  471 NPLDGITYFKSQT------------------------------------------------------------------- 483 
WP_005809981  208 RPDRLLEQYHAE-------------------------------------------------------------------- 219 
WP_066205987  459 NPITAVSYFKGEA------------------------------------------------------------------- 471 
WP_005930880  228 TAGELKESCQRc-IKIRTpqlEra------------iTILSqqfpdfEVlgh---------------------------- 266 
WP_129890465  296 PPEEARVFFNKS-------------------------------------------------------------------- 307 
QNM12576      230 PVQDFIKTWDH--LCAiIrddRake----------meEYLMk-----TMpdyey-------------------------- 266 
WP_306644153  477 NPVESIIYFKRLV------------------------------------------------------------------- 489 
WP_171705735  303 ralaaasgsddWFEFV-VDggdrVAPELVRRLdqHGLRVT-ALTLRQPT-LD--DVFLAL-T---------G-----R-S 361 
WP_118277175  210 -------------------------------I----------------------HAYFHL-----------Gd----E-- 219 
WP_014184520  266 ------vlkgnILKIRkagreesDPRTVYTKIleSGItpD-SIEINPKT-VL--NAYEEL-Lr--------------EhD 320 
WP_096430711  484 -----------M-R---ANrt------------eSecSScgNV-----D-AD--QIFNIIeSevl---deyGnptqvRkv 525 
WP_005809981  220 ------------------------------------------------N-LD--DLYLEL-Tdt-----vpG-----K-E 236 
WP_066205987  472 -----------N-Y---AD------------Iq-SecQKcgNV-----D-SE--QVFEILeSkvl---deyGrrtrkRkw 512 
WP_005930880  267 ----------dlIRIFhCNe---QSGEINTLLvhSGIEVS-EIWL---AgMEptDYLLKM-T---------G-----G-A 313 
WP_129890465  308 ------------------------------------------------D-FA--EIYSSLePtkenphiplEaearfK-T 335 
QNM12576      267 ------rrngnRLEVWdqhnniaGYDAICATLgkNYYypK-FIEQHPYC-VE--NAWKEI-Vy--------------QyE 321 
WP_306644153  490 -----------N-H---VN------------LneSecPVcgNV-----N-PE--QLFNIIeSkvv---deyGnltehRki 531 
WP_171705735  362 L----R 363 
WP_118277175  220 -----Q 220 
WP_014184520  321 L----- 321 
WP_096430711  526 sptqwh 531 
WP_005809981  237 T----Q 238 
WP_066205987  513 kpelww 518 
WP_005930880  314 K----S 315 
WP_129890465  336 SpdflK 341 
QNM12576      322 Q----N 323 
WP_306644153  532 tprewn 537 
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