Conserved Protein Domain Family
Srp

?
COG0541: Srp (This model is not part of the current CDD release)
Signal recognition particle GTPase Srp/Ffh [Intracellular trafficking, secretion, and vesicular transport]
Signal recognition particle GTPase Srp/Ffh; is part of the Pathway/BioSystem: Sec pathway
Statistics
?
PSSM-Id: 512410
Aligned: 961 rows
Threshold Bit Score: 456.796
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_289231015   1 MFTSLSDRLTATFKNLRGKGRLSESDVNATIRDIRMALLDADVALPVVKDFTRGIRERALGAEVSQALNPGQQVVKIVND 80 
QQG39103       2 AIDNLGTKLKESLRKLTRGVFVDKKQIEELVKDIQRALLSADVNVKQVFELTSKIKQRALEEKEPKGIDKRTHIVNIVYE 81 
AJF62065       2 VLEKLGSSLKSTLEKIANSVFVDEKLVNELVKDIQRALLQSDVNVQLVFDLSSSIKKRALEEKEPAGMTKKEHIINILYE 81 
WP_013087522   1 MFENISKSFLDLFKTIRDRGIFKKKFLKHHLDKIKTLLIDSDVSVMVVKKILQKIEKEILKSKIEESFDPSGDFIEIVRK 80 
WP_010917250   2 VLESLSSSLRETIRKITGSTYIDKNTVKEISKDLQRILLKADVNVQTVLNITKEMERRALEEKPPVGMAHQDYMVKIIYE 81 
WP_011177696   2 VLENLSSSLKDVFKKISGSSYIDKETIKEVSKDIQRALLKADVNVKLVISLTNRLQERAATEKPPAGMSEQDFILKIIYE 81 
UCD04072       2 VLENLGSKLKDSLKKLVKASHIDKNVVEELTEDIKKALISSDVNVKLAESLCDKIKRRALAEKPAKTLTAREHTVNIIYE 81 
EHR76692       2 ALEGLSRGIFRSIGLLKSKRKLDDEELREMTRSLRRALQEADFNVRQTKEIVERMESRLREEDPRPGITLQTHAMNILYT 81 
WP_077075894   2 ALDNLSSSLRETFRKITGSSYIDKNVIKEMIRDIQRALLKADVNVKLTLDLSRKIEERSENEKPPAGMTPQDYILKIVYE 81 
UAL07064       2 VLEGLGKSLRDVIGRVNSSSVVDDDLVRDITRELQRALLQADVNVQLVLELTNKIQNRALNEEPPAGRSPKDHITKIIYE 81 
WP_289231015  81 ELIRVLGGETRQ-LTFAKKPPTVIMLAGLQGSGKTTFAGKLGKLLKDQ-GHYPLLVAADLQRPNAVTQLEVVADRAGVLS 158
QQG39103      82 ELVNFLGKEEHG-IKIENKKPFKIMMVGLFGSGKTTSIGKLAKYYSKR-GYKIGTVGLDVHRPAAPEQLKQVCDAIKVDC 159
AJF62065      82 ELVKFLGGEGHK-IEIKK-KQFKIMLVGLFGSGKTTTAGKLAKFFQKR-AGKIALIQLDVWRPAAFSQLEQLGKKLSIPV 158
WP_013087522  81 TLLQIIGEKEFNlFDFSKRNHLIILLVGSKGSGKTTTASKIGRVLRKKyNKKVLLASTDTGRPAAFDQLKQLSEYSKVDF 160
WP_010917250  82 ELLKILGEPSN--VEL---KPQTIMLVGLYGHGKTTSAGKLSRFFMKK-GLSAGLIAADVHRYAAYEQLQQIAESVNAKF 155
WP_011177696  82 ELLSILGEESR--IEL---KPQTIMLVGLYGNGKTTTAGKLARFFIKK-GLSVGLIAADVHRPGAYEQLEQISKQVNSLF 155
UCD04072      82 ELTRFLGGEREE-IKIEK-KPTIILLEGLFGSGKTTTAGKLAKFYKKR-GYKVATVQTDTFRPAAYDQLKQLSKEADVKF 158
EHR76692      82 ELVRLLGPAHQ--FQP---HGATLLLVGLYGQGKTTTTAKLAEWYRRKhGLRVAVIEADVHRPGAYAQLSQLLEDSSVQV 156
WP_077075894  82 ELLAILGKSSN--LKI---QPQTIMLVGLYGQGKTTTAGKLARFFIKK-GLSTGFVACDVHRPAAFEQLRTLSEQTGAKF 155
UAL07064      82 ELVALLDNGDG--LAL---KPQTIMMVGLYGQGKTTTTGKLANYFIKK-GFSVGLIGADIYRPAALDQLKQLGEKVNAEV 155
WP_289231015 159 FA--PERGnvgghdavtesgegtrsfGDPVAVARAGVGQATLRGYDIVIIDTAGRLAVDENLMEQARDIRDAVQPDEVLF 236
QQG39103     160 FI--DKKE------------------KDALNIYKKFEKEFKN--YDILIIDTAGRDALSQDLIKEIRELNNLIKPDERLL 217
AJF62065     159 FG--DPKE------------------KDPLKIYRKFEKELKN--FDVIIIDTAGRDALSDELIAELNRISKAVKADERLL 216
WP_013087522 161 FEvnSKKS------------------RSSFDLAKFSIARFKSERYDTLIVDTEGCMHTDLEKLDEIQKIHKIVNPSDTFF 222
WP_010917250 156 YG--DPKE------------------KDPVKIIKNGLEVLKD--AQVKIIDTSGRDSLDSDLIEEIRRIKEAVKPDQVLM 213
WP_011177696 156 YG--EKNE------------------KDPVKIIKNGLDRLGD--AKVKIIDTSGRDSLDDELIDEIKRIKNEIKPDEVLY 213
UCD04072     159 YG--EEKE------------------KNPVKVIKKYESDFKK--FDVVIVDSAGRDALNSELIKEIKNIDKTLKPHEKLL 216
EHR76692     157 YG--EPDT------------------KDAPTIVRNGLKACAA--ADLVIVDTAGRHQLDQELVDELEQISGLTRANERWL 214
WP_077075894 156 FG--IKGE------------------KNPVKIFNQSIEELKD--IQVKIVDTSGRDSLDSDLLDEITKLKKAVNPDEVLL 213
UAL07064     156 YG--EPEE------------------KNAAKIVERGMKKFSD--KKIVIIDTSGRHALEEDLIQEIKDIAYIAKPSERIL 213
WP_289231015 237 VIDAMIGQAAVDTAHAFQDGVDFTGVVLSKLDGDARGGAALSVASVTGRPIMYASVGEQVKDIEVFHPDRMASRILDMGD 316
QQG39103     218 VISADIGQAAQKQAEAFHESCNITGVLVTKMDGTAKAGGSLSACSVTKAPIKFIGIGEKVDDLEVYNPEGFVSRLLGMGD 297
AJF62065     217 VVSADLGQAAEKQAVKFHETCNITGVIITKLEGTAKGGGALSACAVTKAPVRFIGVGEKPDDFEEFNPKGFVSRLLGMGD 296
WP_013087522 223 VIDSMVGQDAIHSSRTFNKKFPLDGIILTKMDGDSRGGCALSVKEVTGKPIAFLGTGEHISLIEPFHPKKIISKILGTEH 302
WP_010917250 214 VIDATMGQQAGPESKAINDAVGVTGIIITKMDGTAKGGGALSAVAKMRVPIYFIGTGEHMDDMEIFDPKKFLSRLLGLGD 293
WP_011177696 214 VVDATLGQQVGPQAKVLNDAVSISGVIITKMDGTGKGGGALSAVAEIKSPVYFIGTGEHMEDFEVFNPRKFLSRLLGMGD 293
UCD04072     217 VISADIGQAAQKQAQAFYDTTGITGIIVTKLDGTAKGGGSLAACSISGAKVKFITIGEKLNDIEHFKPKNFVSRLLGMGD 296
EHR76692     215 VIDAQVGQAAGPVAASFHTLAGVTGIVITKLDGTARGGGALSAVAATGAPIVHIGVGENIGDLEKFESDRFISRLLGMGD 294
WP_077075894 214 VIDATVGQQAGPQAKSLMDATGLTGVIITKMDGTGKAGGALSAVAQTGVPVYMIGTGEHLEDFEIFSPKKFLGRLLGMGD 293
UAL07064     214 VLDSQVGQQAGPQADAFHNAVGVTGVILTKMDGTAKGGGALSAVAKTKARIVFIGVGEHIRDLEPFDADRFISRLLGMGD 293
WP_289231015 317 VLTLIEQAERA-FDRQQA-AEMHRKFMA-EEdFTFTDFLEQMAAIKKMGNLKSLLGMMPG--MGQM--R-----DQ---- 380
QQG39103     298 LKSLLEKAREA-ITEEQA-QELGSKFIK-GD-FNLIDLYQQMEAMSKMGPLGKIMEMIPG--MGQLel----pkDF---- 363
AJF62065     297 IEALLKKAEEA-ITKEDA-EDMGKKFLK-GD-FNLIDLYEQMQAMKKMGPLSKIAELIPG--MGQLkl----pkDA---- 362
WP_013087522 303 TFHIMKDMKKN-FSINIK-KKLFQKKSDfYK-FDLEDFLEQLNYMKNIDNLKKIVRKIPY--LRQS--Vdn--lIR---- 369
WP_010917250 294 LETLFETVKEAnITEEEA-QKSFEKLMT-GK-FNLKDMYDVWEKFSRPGLMKKLVDSLP---LAKLpgSqkindDQ---- 363
WP_011177696 294 IDALMEAVKETnITEEEA-EKSLDKLMS-GK-FNLKDMYDVWEKFSKPGLLKKIFNSMP---LSRIpgGdklndSE---- 363
UCD04072     297 LETLLEKAKEA-ISTEDA-EEAGKRLME-GK-FNLNDLYTQLETMKKVGPLKQITQMVPG--MGAMnv----pkDA---- 362
EHR76692     295 IQGLIDLAPED-MDEEEA-MRLTQRLMS-GR-FTLNDMYKQMEMMSKVGTIDKLMSFLPGnmLGGMgam---skGQ---- 363
WP_077075894 294 PEALLDVAQEAdISDEKA-EETMTKIMS-GK-FNLMDMYDIWEKFAKPSLMKRLFDSIP---VGkm------pkGAsnml 361
UAL07064     294 LASLVRIAKEE-IGEDEAlEQVAKNMLS-GR-FSLTDMYQQMQAVTKMGPLQKVMSMIPG--MSNM--Ddk--------i 358
WP_289231015 381 -LnALDEKEFDRVEAMVRSMTPFERSHPKQINGSRRARIAKGSGVTVSEVNQLLERFQGAQKMMRQMRRgGG-----GMp 454
QQG39103     364 -L-KVQEDKLKRWKHAMQSMTKKELEDPTEISRSRIDRISLGSGVSGKEVRELIKQYKMSKKLMKSLGN-VDdp--sKLm 438
AJF62065     363 -L-EVQQEKLEKWRYIMDSCTKEELEDPDSISGTRIERIAKGSGTSAKEVRDLMKQYKQAKKMMKMFKG-GNmknmeKMm 439
WP_013087522 370 -S-DIDESLLSKMKAIIQSMTHEERKNPEIIKSSRKRRISLGSGTKVQEINFLLKRFQEVKKMMNNFKK-NKk-----F- 440
WP_010917250 364 -I-LTAEQKLQRYRIIMDSMTFQELENPEIINAKRITRIARGAGVREEDVRMLLKEFKAMKNNMKLMKG-NRgf--kKIl 438
WP_011177696 364 -I-DRANEKLNIYRVILDSMTYSELENPDIINAKRIKRISIGSGKDEREVRALLKEYNAMKNNMKMIKS-NRnf--kKLl 438
UCD04072     363 -L-QKQESQMKVWKFAMDSMTPEERENPDIITGSRVERIAKGSGRSVQEVRGLIKQYNQMKKAMKMLGS-PKkm--qKFm 437
EHR76692     364 -K-EAMQGNLDRYRTIMDSMTAWEKNEPAKIKADRIRRVARGAGVREKDVRELIAQWNRSRKMMKGMGG-NRkl--nKQm 438
WP_077075894 362 dL-DAAQEKIGKYTVILDSMTYKELENPEIINAKVIRRVSRGSGTQEQDVRNLLKEFRAMKENAKMMKG-NRal--kKMm 437
UAL07064     359 dY-EASQAKLARYKVIMDSMTKQEKDEPNLIKGKRIDRIAVGSGVSGHDVRELLKQYNQSKKMMGSFGK-DRkm-rkKMm 435
WP_289231015 455 --gMp---GMpggA-P------G-G 466
QQG39103     439 r-kFk--gKL-----Pkg-----fM 450
AJF62065     440 k-rMg---GM-----Pkm------- 448
WP_013087522 441 ---Fn--------Ff---------- 444
WP_010917250 439 qsnFrs-gNFg--Ldd-----lG-L 454
WP_011177696 439 ksqMks-gNFg--Led-----lEnI 455
UCD04072     438 k-mFg---Qg--kL-Plnf------ 449
EHR76692     439 r-kMmkdgEMd--LdPss---fGm- 456
WP_077075894 438 rgqMk--gN------PdllkefEd- 453
UAL07064     436 k-qFg---GMd--Lde-----lQdT 449
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap