Conserved Protein Domain Family
CedB

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COG0433: CedB (This model is not part of the current CDD release)
Crenarchaeal DNA import helicase CedB/HerA or a related bacterial ATPase [Replication, recombination and repair]
Statistics
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PSSM-Id: 512404
Aligned: 717 rows
Threshold Bit Score: 102.385
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_055409319 124 LGqlaqdekgrpvlvlpeq-------pprpssiieepdtstiEAllhrgieggRg-----IYLGKLay-----ntGI--- 183
WP_013195239 145 ICilynesggdgqltrrmsd----ripkpntsilpvddkikiQTgln---ipkEgiflghLSVGGElvktraeppNVpyy 217
WP_020446976 167 VAiiyedgideetgdpeqkrratdrvpkpettvhrardadeiKTglk---ipgDgiflghLAVGGErvttaaappTIdyr 243
WP_049993379 161 IAiisstddglersivnki-------pkpntpvafsldeeylRTgln---ipqDgvfagyLSVGGDrmtv--dgdpLpyf 228
WP_226990744 250 LCilyrkkadssltrrmadr-----iprpntpilpvtdrlevQTgln---ipeEgvflghLSVGGElvkthsepeTVayy 321
WP_247994904 147 IAilspdastdeleldrgivn---ripkpntpvslsredeylRTglg---ipdDgvfcgyLSVGGTemei--erqpFpyy 218
WP_254272057 164 LAvlyqdggelkrrmtdri-------pkpdtavreatdkseiKTglk---ipeDgvflghLSVGGEkvrtsaeppTIdyr 233
WP_123075252 153 VSvlyrddgelkrrmpdrv-------pkpetvvreadddaeiKTalk---ipdAgvfvghLAVGGEkvrtgatppTIdyr 222
WP_013899273 141 ICilyeqkkegmitrrmsdr-----iprpntpimpvndkikiQTgln---ipkEgifmghLSVGGElirthasppTVpyy 212
WP_276235347 140 LAvlyseggdllrrmpdrv-------pkpetvvrraedksevKTglk---vpdDgvfvghLAVGGEkvrtaaeppTVdyr 209
WP_055409319 184 ----------RVYlDPDRLT-MHLAVLGQTGSGKTETVKRIVAEYaWRKdef-----------sdSGGVIVFDIAGEYtg 241
WP_013195239 218 --------lrNDYsMGDPLVfRHMLVCGSTGTGKTFMTKNILRQF-LSDgnryvlr--sdenrwkNPCVVIMDPQDEY-- 284
WP_020446976 244 --------lnDDYtAGDPLLfRHTLIAGGTGSGKTHAAKNVLRQV-LDDertypm----gdgrevQAAVVQFDPQDEY-- 308
WP_049993379 229 innpgidpvtEEIeSGEPAIfRHTLVAGSTGKGKTHFTKNLLRQF-ATdkrypienhqtgdtehsRLNLVILDPENEY-- 305
WP_226990744 322 --------lrNDYlMGDPLIfRHMLVCGSTGTGKTFLSKNILRQF-MTEdnryrlrn-sqdkarkNPCLVIMDPQDEY-- 389
WP_247994904 219 lsnpgidpetTEKqPGEPAVfRHLLVAGSTGKGKTHFTKNLLRQF-VDgkrypierhetgetvhsRLNVVIIDPENEY-- 295
WP_254272057 234 --------lkDDYtDGDPLIfRHTLVAGGTGSGKTHSSKNVLRQY-LGrtyems------dgrspELAVVQFDPQDEY-- 296
WP_123075252 223 --------vkDDYaTGDPLAfRHTLVAGGTGSGKTHTAKNVLRQY-LSEdrtypve--agsdrevQAAVVQFDPQDEY-- 289
WP_013899273 213 --------lrNDYsMGDPLVfRHLLICGSTGTGKTFLTKNIIRQF-MDEdnryqlr--ldsetkkNPCFVIMDPQDEY-- 279
WP_276235347 210 --------lkDDYdSGDPLVfRHTLVAGGTGSGKTHASKNVLRQY-LGrtyems------dgrtpGAAVVQFDPQDEY-- 272
WP_055409319 242 ypyrredivpllDAVMQpelytslpatwarntnktilvpydlssvgfkraSDeryaaslvgllgdlekrfgrnlrglvyg 321
WP_013195239 285 ------------SQVYEenp---------------------------einTQdeysfnse--------------nvefgs 311
WP_020446976 309 ------------AQLHDdnp---------------------------dldADtarqyere--------------giangg 335
WP_049993379 306 ------------SEMRNgnp---------------------------elrDEdelvqrler------------qgievgg 334
WP_226990744 390 ------------SQIFEdne---------------------------tltEEdkfrfese--------------nvtygr 416
WP_247994904 296 ------------WEM-Gvdp---------------------------digEKaerrlrrh--------------gikvgg 321
WP_254272057 297 ------------AQMHDdnp---------------------------dltDDfarrcere--------------gvaygg 323
WP_123075252 290 ------------AQMHDdnp---------------------------eadREderrwere--------------giahgg 316
WP_013899273 280 ------------SQLFEdnd---------------------------vltSEdennfrsh--------------rinygr 306
WP_276235347 273 ------------AQMHDdgd----------------------------ypDDfgraldae--------------gvkhgg 298
WP_055409319 322 rhSiylVDssggiksvsretaaslikyepmlvvatplPSRLsVeeVYELshttssafvdaleTVADILGLLdvgvvnevk 401
WP_013195239 312 wsNtktFVakvdgysy--------------ngksraqQVEFtIp-FELV-------------KNNSWLIAA--------- 354
WP_020446976 336 hdDtlaFVpkvgsaty-------------dggghraeQVEFtVp-FSMV-------------RGNPWLVAG--------- 379
WP_049993379 335 idNfetFIpdigntn----------------apttgeSRNLtIp-FSLV-------------EHRPQLLMP--------- 375
WP_226990744 417 vqStkaFVakvegqky-------------pgdksraeQVEFtIp-FSLV-------------EHNSWLIAA--------- 460
WP_247994904 322 vdDlevFVptvenvs----------------ppgtgtHQSFgIp-FELV-------------ESRPQLLMP--------- 362
WP_254272057 324 ydDtiaFIpkvagtny-------------sashhhaeQVEFtIp-FSLV-------------HGNPWLIAG--------- 367
WP_123075252 317 hdDtvaFVpkvgnaty-------------taahhgadQVPFtIp-FSMA-------------RSRPWLAAS--------- 360
WP_013899273 307 wsRtrtFAakvqdhky--------------sgksraqQIEFtIp-FEVV-------------RSNSWLIAP--------- 349
WP_276235347 299 hdDtkaFVpvvgeaty-------------aadhhraeQVEFtLp-FSMV-------------RSRPWLVAG--------- 342
WP_055409319 402 gladimdmLTRYKVEPRILlQHVIDAADeyrrvlvgRKSPaeaekeacitlwrklksmgvpfvdcrsiagivaynlasea 481
WP_013195239 355 --------AGLTELQYLAL-DILLEDYF--------KKSGeh-------------------------------------- 379
WP_020446976 380 --------SGLNDNQYQAL-HELLDRFF--------GQYGsdg------------------------------------- 405
WP_049993379 376 --------YTPTEVTRGAL-ENCIQAYF--------DDTdap-------------------------------------- 400
WP_226990744 461 --------AGMSELQYIGL-EVLLGDFF--------KSSVph-------------------------------------- 485
WP_247994904 363 --------YQPRETIRSAL-ELALDSYF--------DDGVehep------------------------------------ 389
WP_254272057 368 --------SSLNDNQYGALvNTFLPRFK--------REYGrga------------------------------------- 394
WP_123075252 361 --------AGLNDNQYPAL-QDLLRRFF--------DQYGdgg------------------------------------- 386
WP_013899273 350 --------AGMTELQYIAM-DLLLDDYF--------RKGNitr------------------------------------- 375
WP_276235347 343 --------AGLNDNQYPAL-QRLLRRFF--------RQHGdgg------------------------------------- 368
WP_055409319 482 eerlsqpgvdesplagflykiasylpapsrgssdpsispweviatalehDEkLasLKpqKLPekasGElvgslrasfsRV 561
WP_013195239 380 -----------------------------------------------tyRG-F--LD--YIEdeatRSa---------YV 398
WP_020446976 406 -----------------------------------------------tyDQ-F--TE--FMDdpalREe---------LD 424
WP_049993379 401 -----------------------------------------------tyDN-F--LQ--YLRtnedSEs--------pLR 420
WP_226990744 486 -----------------------------------------------tyQN-F--IN--HIEnegtRSh---------YV 504
WP_247994904 390 ----------------------------------------------ptyEG-F--KR--YVtn-drT-----------LQ 406
WP_254272057 395 -----------------------------------------------tyDQ-F--LT--FLDdpalKEe---------LH 413
WP_123075252 387 -----------------------------------------------tyRE-F--CA--FLDdpalKEe---------LD 405
WP_013899273 376 ----------------------------------------------ptyRG-F--ID--YISdagtRAt---------YV 395
WP_276235347 369 -----------------------------------------------tyAE-F--RS--FLDdpalREe---------LH 387
WP_055409319 562 KSSlEGYAKgTVESLARGLRRVARHv--SPh-LDaTHyRLIAQRl-VEGFSIVHLAPPSRgDt-DHAVARLIAEAFTVST 636
WP_013195239 399 DSG-KIHES-SYDGIVRRVKNRAFEkvfDQdaRP-IT-DILDEVfkPGQVSVFPTEYINSpLirDLIVLTLMTTIVDNKL 474
WP_020446976 425 ETG-RVHEA-TFDAVFRRVRG--FGhvfDQdaRP-IT-DQVRDLvrPGGLSVVPTYHISDsRaaEVVVLAVATLLVDEKL 498
WP_049993379 421 QRY-NIEDG-TWSAIMRRVTDAAYRdvfDHgtNP-LP-DVSNAVfrEGQVTVIPTSHLHGaKe-ELTVLSILSYIIDNKI 495
WP_226990744 505 DSG-KLHES-SYDGIVRRVSSRFFSkvfDRdaTP-IT-EILDKIfkPGQVSVFPTEYISSpRirDLIVLTIMSLIVDNKL 580
WP_247994904 407 DDA-QIANQ-TWSAMVRRINDTTFEtvfDHgiSS-LP-ELASDMfrEGQVTVIPTSHLRGtNe-RLVVLSILSYIIENKI 481
WP_254272057 414 EAG-DVHEA-TFDAVKRRVRG--FGavfDQdaEP-IT-DQVARLvrDGGLTVIPTYHITDsRtaSTIVLAVSSLLIDQKL 487
WP_123075252 406 ESG-KVHEA-TYEAVFRRVRG-VPDgvfDQdaRP-IT-DLVEQFvkPGRLSVVPTYHVSDsRatETVVLALASLLVDEKL 480
WP_013899273 396 DSG-KIHEA-SYDGIVRRVNNPSFKkvfDQdaAP-IT-EMLADVfkPGYISVFPTEYINSpRirDLIVLTLMTVIVDNKL 471
WP_276235347 388 EAG-KVHEA-TYDAVKRKTYG--FGdvfDGdaPP-IT-DLVHEFvrPGGLTCVPTYHINDsRktTTVVLALASLLVDEKL 461
WP_055409319 637 ts-----ysPQRRTLIVVEEAHNLAPAGEn---RASKSLLLRVAREGRKWGLSLILVSQRPGFIDPGILSQAATLIALRI 708
WP_013195239 475 stsg-nesvRKTPIVLGLDEAHRYLAKASgehsRRIISKFADAARQGRKEGLGLFLITQDPQDIDDTVFKQINTRIILNL 553
WP_020446976 499 ssdptydriKDTPLIVGMDEAHNYLTDADsvqaRRVIGTFTDAAKQGRKERLGLFLVTQDPQDIHDAVFKQINSTVVLNL 578
WP_049993379 496 ddynvdpnvkDTPLLVAVDEAHNYVSDPNtlreQYIVNRARDAVKQGRKDKLGLFMITQNPEDIDGDILKQTNTNIFLGL 575
WP_226990744 581 nttg-vdaiKETPIILTLDEAHRYLSKANgehaRLIISRFADAARQGRKEALGLFLITQDPQDIDDTVIKQINTKLILNL 659
WP_247994904 482 ddhhvvdpikNTPMLVAVDEAHNYFSEPDllreQYIVRRAREAVKQGRKDKLGLLMITQNPEDIDDDVLKQINTNVFLGL 561
WP_254272057 488 sndprydriKETPLVLGMDEAHNFLTDADsvqgRKVIGKFTEAAKQGRKERLGLYLITQDPQDIADPVFKQINTTMVLNL 567
WP_123075252 481 ssdprhpriAETPLVVGMDEAHNFLADADtvqaRHVVAKFTDAAKQGRKERLGLFLITQDPQDVAESVFKQINTKVVLNL 560
WP_013899273 472 stsg-nldvKNTPIILGLDEAHRYLARVDgehsRRIVSKFADAARQGRKEGLGLLLITQDPQDIDDTVFKQVNTRVILNL 550
WP_276235347 462 sndprydriKETPLVLGMDEAHNFLTDADsvqaSKVIGKFSEAAKQGRKERLGLFLITQDPQDIADPVFKQVNTSVVLNL 541
WP_055409319 709 TNPDDLTGIkrgvgSVSQETVERLPDLEPGQALVSGLAvperrIPLLVRV-ERLAR--SPK 766
WP_013195239 554 TNDNAINAL-----NVPKEYEKRIPYLKKGQMIVYSPDn---sDIVEIIGlPKCVVkh--- 603
WP_020446976 579 GDEDAISAV-----NIPTALEQKVPYMEQGQMVVYSPDn---sEPVELVGlEHCLVkhE-- 629
WP_049993379 576 REEVITKVP-----SIPRGYEQDLQKYGKGQAVIKAPDv----EAVEVKGlPYCLTqhSN- 626
WP_226990744 660 NNDAAISSL-----KVPKEYERRIPYLKKGQMIIHSPDn---sDIVEILGlSNCVVrhr-- 710
WP_247994904 562 REEIVEKVP-----SVPREFKRDIPKFGKGQAVVKAPDv----ESVEVMGlPMCVTkhGN- 612
WP_254272057 568 GDEDAIKAV-----NIPSNLESKVPYMEKGQRVVYSPDn---sEPVELIGlSTCVTrhGRD 620
WP_123075252 561 GDEDAIKSV-----NIPASLAEKVPYMETGQMVVYSPDn---sEPVELVGlPTCLTrhGRD 613
WP_013899273 551 TNDSAINAL-----NVAKEYQKRIPYLKKGQMIIHSPDn---sDIVEITGlSRCVVrhi-- 601
WP_276235347 542 GDEDAIKSV-----NLPSTLEGKVPYFEKGQMAVYSPDn---sEPVEVVGlPHCVTkhGRD 594
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