Conserved Protein Domain Family
RidA

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COG0251: RidA (This model is not part of the current CDD release)
Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family [Defense mechanisms]
Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family; is part of the Pathway/BioSystem: Pyrimidine degradation
Statistics
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PSSM-Id: 512398
Aligned: 990 rows
Threshold Bit Score: 42.891
Created: 24-Mar-2025
Updated: 26-Mar-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_009516190   1 M-------------------------------------TTGQP--MArYAAARR--VG-DFVFMSGVVAV-NPAtreavr 37 
WP_062053133  15 MtlclvcisihgckeadkevqeevavkieqpeyfnlrpEIEKA--YG-YSHAVK--IG-NDIKISGAVSM-DNE------ 81 
WP_041562535   1 Msepeffa------------------------tpgygaTMLAN--MH-YNQAVR--IG-DRVETSGQGGW-DAE------ 43 
WP_162330595   1 Msqqnkkg-------------------------egfgmpWEDI--YG-YAQAIK--KG-NTVWISGQLGH-NEK------ 42 
WP_093942540   1 Mstvtfgi------------------------tpgfgeKLHDA--LG-YSGAVR--VG-DRVEISGQAGV-DDD------ 43 
WP_022658815   1 Mktiir----------------------------ktpnTMYQP--VGnYSHTTiipAGmDTYVFSGQIGIrD-D------ 43 
WP_103424037   1 Mtrra-----------------------------iepaGLADAaqHH-FTPAIV--AD-GTLYVSGQVGT-DDE------ 40 
WP_245529134   1 Mekyrstkvlvs---------------detpyyfllrpEVEKA--HG-YSHAVK--IG-NSIKISGAVSM-DNE------ 52 
WP_302082597   1 Msrev-----------------------------iqpdGLVDAqgIG-YSHGIV--ED-GTLYMSGQVGW-DEH------ 40 
WP_171975679   1 Mnkpeffi------------------------tpgygeYMLNK--LH-YSQAVK--IG-DRVETSGQGGW-DDN------ 43 
WP_009516190  38 ryedlpeaarqalralgydtGQMsvdIfEAPIVAQSWLVLDRIRQLAEEHGGRMADVVKLVQYFR-----EL---RD-YA 108
WP_062053133  82 --------------------GNP---TaVGDFEQQMKNCYTDLEKILTHYGCTFDDVIVENIFTT-----NM---PL-LL 129
WP_041562535  44 --------------------WNF-----PESLADEIVQAFENVEQTLAQAGATWRDVVSVNSYHVpt-aaDAigeDH-NR 96 
WP_162330595  43 --------------------GEL-----AEGMDAQMNQTYANIKALLSRFGMTMDNVVEEVIYTM-----DM---ATaFE 89 
WP_093942540  44 ----------------------L---ViPDALEDEIVQAFDNVERTLATVGASWKDVIHVNSYHKvapgdDVigaDH-NM 97 
WP_022658815  44 --------------------GSf-----PAAFNDEVLQLFKNIKVLLGTEGLSGADITKVNIWSV-----KE---ID-WD 89 
WP_103424037  41 --------------------GEY---V-GDDVRSQTRQAFENVETLLRSVDRGLGDVVKVTSYVV-----DI---ADnYE 88 
WP_245529134  53 --------------------GNP---TaIGDFEEQMKNCYSDLDKILKHYGCTFDDVVVENVFTT-----DM---PK-FL 100
WP_302082597  41 --------------------FEV---V-GEDIQSQTRKAFENVETLLADVDRTLDDVRKVTAHIV-----DPp--AH-RE 88 
WP_171975679  44 --------------------LQI-----PESLADEIAQAFQNVERTLATAGASWEHVVHVNSYHV-----DGfppEV-NE 92 
WP_009516190 109 PYNRVRGLFYPD-EPPVSTVVEVSRfLPGdEVLVEVEATMYLP 150
WP_062053133 130 EHGAYRGTIYTN-NFPTGSWLGVKE-LALpEFMIEIEMEVHKM 170
WP_041562535  97 VMVEQFRKRMGE-RAPIWTEIGVPA-LGApKMRVEIRVTAIVG 137
WP_162330595  90 ARKNFKTVYYTDpKLVASTMVGVTA-LALpGQLVEIKIIATE- 130
WP_093942540  98 VMAEQFRRRLDG-RAPIWTETGVTV-LGLaAMRVEIRVTAIVG 138
WP_022658815  90 YFDNEWDKLFDR-AYPSMTIAHVTA-LGLpEISIEIDIWAAKQ 130
WP_103424037  89 AFHSVYREVFPErPFPCHTALGVDS-LASeTPLVEIEVEAPVD 130
WP_245529134 101 EFAAYRAEIYKK-QFPTGSWLGVKE-LALpEFMIEIELEVRKT 141
WP_302082597  89 GFFEVWNEVYADqPYPCLTILGPHK-LAQeEFLVELEVEVPVE 130
WP_171975679  93 VMVRLFHHYMPE-RAPIWTAVGVAA-LALpAMRIEIRVTAIVP 133
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