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Blocked all IBIS related code and rebuild 4.5.2. JIRA:DD-2402
Replaced auto_ptr with unique_ptr. JIRA CXX-11687
Use ERR_FATAL macro for correct no-return info. JIRA: CXX-5700
fix deprecated functions
switch to a CPIDGuard implementation for the lock file;
fix non-windows fstream ctor
avoid the use of CreateTmpFile when creating a lock for the message file; have started encountering problems where the lock file is not properly cleaned up, coupled with the fact CreateTmpFile in this context is not portable.
Fixed svn properties in trunk/c++.
CVS $Log$ keyword clean-up: everything except "internal".
major reworking of Seq-id handling
Use stream_utils.hpp from corelib location
fix GCC warnings; switch threader to C++ PSSMs
migrate to wxWidgets 2.6.2; handle signed/unsigned issue
Added PCH ncbi_pch.hpp
prefer prefix vs. postfix ++/-- operators
remove cn3d/ from include paths; add pragma to disable annoying msvc warning
send pending commands before messenger is destroyed
make non-reply message warning only
add AlignmentChanged flag; flush message file; check row order of repeats
add CDTree->Select command
fix char/traits problem
add CommandProcessor to handle file-message commands; fixes for GCC 2.9
add messenger destroy function
add file_messaging module; split cn3d_main_wxwin into cn3d_app, cn3d_glcanvas, structure_window, cn3d_tools
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