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Definitions for GetSeqMap

Type Member of File Line
function prototype or declaration CBioseq_Handle /include/objmgr/bioseq_handle.hpp 315
function prototype or declaration CBioseq_Info /include/objmgr/impl/bioseq_info.hpp 223
function prototype or declaration CSeqVector /include/objmgr/seq_vector.hpp 148
function definition CSeqVector /include/objmgr/seq_vector.hpp 324
function definition CBioseq_Handle /src/objmgr/bioseq_handle.cpp 415
function definition CBioseq_Info /src/objmgr/bioseq_info.cpp 1245

6 declarations in 5 files.

References to GetSeqMap

File Line
/include/algo/align/util/compartment_finder.hpp 79
/include/objmgr/bioseq_handle.hpp 315
/include/objmgr/impl/bioseq_info.hpp 223
/include/objmgr/seq_vector.hpp 148 324
/src/algo/blast/api/blast_aux.cpp 1152
/src/algo/seqqa/single_aln_tests.cpp 650
/src/algo/sequence/gene_model.cpp 1524
/src/app/objmgr/demo/objmgr_demo.cpp 1484 3022 3050
/src/app/split_cache/split_cache.cpp 677
/src/app/streamtest/process_explore.hpp 96
/src/gui/app/project_tools/projectfilewriter.cpp 231
/src/gui/packages/pkg_sequence/component_search_tool.cpp 372
/src/gui/widgets/edit/vectortrimpanel.cpp 582
/src/gui/widgets/object_list/text_item_seq_loc.cpp 66
/src/objmgr/annot_collector.cpp 1920 2328 2399
/src/objmgr/bioseq_handle.cpp 273 415 417 445 470 1176
/src/objmgr/bioseq_info.cpp 1245
/src/objmgr/handle_range_map.cpp 361
/src/objmgr/seq_loc_mapper.cpp 264 308 347 433
/src/objmgr/seq_map.cpp 531 1174 1183
/src/objmgr/seq_map_ci.cpp 185 199 458 757 769
/src/objmgr/seq_map_switch.cpp 125 512 596 624
/src/objmgr/seq_vector.cpp 155
/src/objmgr/split/blob_splitter_parser.cpp 471
/src/objmgr/test/test_helper.cpp 881 929 975 1023
/src/objmgr/tse_assigner.cpp 153 257
/src/objmgr/util/bioseqgaps_ci.cpp 199
/src/objmgr/util/seq_trimmer.cpp 526 585 710
/src/objmgr/util/sequence.cpp 3332 3866
/src/objtools/cleanup/newcleanupp.cpp 681
/src/objtools/edit/seq_entry_edit.cpp 2532
/src/objtools/format/context.cpp 1217
/src/objtools/format/gather_items.cpp 470
/src/objtools/writers/agp_write.cpp 305

63 references in 34 files.