Auxiliary class to retrieve sequence identifiers its position in the alignment which are below the inclusion evalue threshold. More...

#include "psiblast_aux_priv.hpp"
(Private to src/algo/blast/api.)

Public Types
typedef CPsiBlastIterationState::TSeqIds	THitIdentifiers
	Container of Seq-ids for the subject sequences (hits) aligned with the query. More...

Public Member Functions
void	operator() (const objects::CSeq_align_set &alignments, double evalue_inclusion_threshold, THitIdentifiers &output)
	Extract all the THitId which have evalues below the inclusion threshold. More...

Detailed Description

Auxiliary class to retrieve sequence identifiers its position in the alignment which are below the inclusion evalue threshold.

Definition at line 104 of file psiblast_aux_priv.hpp.

The documentation for this class was generated from the following files:

Public Types