Search Toolkit Book for CPC_XRefData
#include <objects/pcsubstance/PC_XRefData.hpp>
Inheritance diagram for CPC_XRefData:
Collaboration diagram for CPC_XRefData:
Public Member Functions | |
| CPC_XRefData (void) | |
| ~CPC_XRefData (void) | |
| Public Member Functions inherited from CPC_XRefData_Base | |
| CPC_XRefData_Base (void) | |
| virtual | ~CPC_XRefData_Base (void) |
| DECLARE_INTERNAL_TYPE_INFO () | |
| virtual void | Reset (void) |
| Reset the whole object. More... | |
| virtual void | ResetSelection (void) |
| Reset the selection (set it to e_not_set). More... | |
| E_Choice | Which (void) const |
| Which variant is currently selected. More... | |
| void | CheckSelected (E_Choice index) const |
| Verify selection, throw exception if it differs from the expected. More... | |
| void | ThrowInvalidSelection (E_Choice index) const |
| Throw 'InvalidSelection' exception. More... | |
| void | Select (E_Choice index, EResetVariant reset=eDoResetVariant) |
| Select the requested variant if needed. More... | |
| void | Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool) |
| Select the requested variant if needed, allocating CObject variants from memory pool. More... | |
| bool | IsRegid (void) const |
| Check if variant Regid is selected. More... | |
| const TRegid & | GetRegid (void) const |
| Get the variant data. More... | |
| TRegid & | SetRegid (void) |
| Select the variant. More... | |
| void | SetRegid (const TRegid &value) |
| Select the variant and set its data. More... | |
| bool | IsRn (void) const |
| Check if variant Rn is selected. More... | |
| const TRn & | GetRn (void) const |
| Get the variant data. More... | |
| TRn & | SetRn (void) |
| Select the variant. More... | |
| void | SetRn (const TRn &value) |
| Select the variant and set its data. More... | |
| bool | IsMesh (void) const |
| Check if variant Mesh is selected. More... | |
| const TMesh & | GetMesh (void) const |
| Get the variant data. More... | |
| TMesh & | SetMesh (void) |
| Select the variant. More... | |
| void | SetMesh (const TMesh &value) |
| Select the variant and set its data. More... | |
| bool | IsPmid (void) const |
| Check if variant Pmid is selected. More... | |
| TPmid | GetPmid (void) const |
| Get the variant data. More... | |
| TPmid & | SetPmid (void) |
| Select the variant. More... | |
| void | SetPmid (TPmid value) |
| Select the variant and set its data. More... | |
| bool | IsGi (void) const |
| Check if variant Gi is selected. More... | |
| TGi | GetGi (void) const |
| Get the variant data. More... | |
| TGi & | SetGi (void) |
| Select the variant. More... | |
| void | SetGi (TGi value) |
| Select the variant and set its data. More... | |
| bool | IsMmdb (void) const |
| Check if variant Mmdb is selected. More... | |
| TMmdb | GetMmdb (void) const |
| Get the variant data. More... | |
| TMmdb & | SetMmdb (void) |
| Select the variant. More... | |
| void | SetMmdb (TMmdb value) |
| Select the variant and set its data. More... | |
| bool | IsSid (void) const |
| Check if variant Sid is selected. More... | |
| TSid | GetSid (void) const |
| Get the variant data. More... | |
| TSid & | SetSid (void) |
| Select the variant. More... | |
| void | SetSid (TSid value) |
| Select the variant and set its data. More... | |
| bool | IsCid (void) const |
| Check if variant Cid is selected. More... | |
| TCid | GetCid (void) const |
| Get the variant data. More... | |
| TCid & | SetCid (void) |
| Select the variant. More... | |
| void | SetCid (TCid value) |
| Select the variant and set its data. More... | |
| bool | IsDburl (void) const |
| Check if variant Dburl is selected. More... | |
| const TDburl & | GetDburl (void) const |
| Get the variant data. More... | |
| TDburl & | SetDburl (void) |
| Select the variant. More... | |
| void | SetDburl (const TDburl &value) |
| Select the variant and set its data. More... | |
| bool | IsSburl (void) const |
| Check if variant Sburl is selected. More... | |
| const TSburl & | GetSburl (void) const |
| Get the variant data. More... | |
| TSburl & | SetSburl (void) |
| Select the variant. More... | |
| void | SetSburl (const TSburl &value) |
| Select the variant and set its data. More... | |
| bool | IsAsurl (void) const |
| Check if variant Asurl is selected. More... | |
| const TAsurl & | GetAsurl (void) const |
| Get the variant data. More... | |
| TAsurl & | SetAsurl (void) |
| Select the variant. More... | |
| void | SetAsurl (const TAsurl &value) |
| Select the variant and set its data. More... | |
| bool | IsProtein_gi (void) const |
| Check if variant Protein_gi is selected. More... | |
| TProtein_gi | GetProtein_gi (void) const |
| Get the variant data. More... | |
| TProtein_gi & | SetProtein_gi (void) |
| Select the variant. More... | |
| void | SetProtein_gi (TProtein_gi value) |
| Select the variant and set its data. More... | |
| bool | IsNucleotide_gi (void) const |
| Check if variant Nucleotide_gi is selected. More... | |
| TNucleotide_gi | GetNucleotide_gi (void) const |
| Get the variant data. More... | |
| TNucleotide_gi & | SetNucleotide_gi (void) |
| Select the variant. More... | |
| void | SetNucleotide_gi (TNucleotide_gi value) |
| Select the variant and set its data. More... | |
| bool | IsTaxonomy (void) const |
| Check if variant Taxonomy is selected. More... | |
| TTaxonomy | GetTaxonomy (void) const |
| Get the variant data. More... | |
| TTaxonomy & | SetTaxonomy (void) |
| Select the variant. More... | |
| void | SetTaxonomy (TTaxonomy value) |
| Select the variant and set its data. More... | |
| bool | IsAid (void) const |
| Check if variant Aid is selected. More... | |
| TAid | GetAid (void) const |
| Get the variant data. More... | |
| TAid & | SetAid (void) |
| Select the variant. More... | |
| void | SetAid (TAid value) |
| Select the variant and set its data. More... | |
| bool | IsMim (void) const |
| Check if variant Mim is selected. More... | |
| TMim | GetMim (void) const |
| Get the variant data. More... | |
| TMim & | SetMim (void) |
| Select the variant. More... | |
| void | SetMim (TMim value) |
| Select the variant and set its data. More... | |
| bool | IsGene (void) const |
| Check if variant Gene is selected. More... | |
| TGene | GetGene (void) const |
| Get the variant data. More... | |
| TGene & | SetGene (void) |
| Select the variant. More... | |
| void | SetGene (TGene value) |
| Select the variant and set its data. More... | |
| bool | IsProbe (void) const |
| Check if variant Probe is selected. More... | |
| TProbe | GetProbe (void) const |
| Get the variant data. More... | |
| TProbe & | SetProbe (void) |
| Select the variant. More... | |
| void | SetProbe (TProbe value) |
| Select the variant and set its data. More... | |
| bool | IsBiosystem (void) const |
| Check if variant Biosystem is selected. More... | |
| TBiosystem | GetBiosystem (void) const |
| Get the variant data. More... | |
| TBiosystem & | SetBiosystem (void) |
| Select the variant. More... | |
| void | SetBiosystem (TBiosystem value) |
| Select the variant and set its data. More... | |
| bool | IsGeogse (void) const |
| Check if variant Geogse is selected. More... | |
| TGeogse | GetGeogse (void) const |
| Get the variant data. More... | |
| TGeogse & | SetGeogse (void) |
| Select the variant. More... | |
| void | SetGeogse (TGeogse value) |
| Select the variant and set its data. More... | |
| bool | IsGeogsm (void) const |
| Check if variant Geogsm is selected. More... | |
| TGeogsm | GetGeogsm (void) const |
| Get the variant data. More... | |
| TGeogsm & | SetGeogsm (void) |
| Select the variant. More... | |
| void | SetGeogsm (TGeogsm value) |
| Select the variant and set its data. More... | |
| bool | IsPatent (void) const |
| Check if variant Patent is selected. More... | |
| const TPatent & | GetPatent (void) const |
| Get the variant data. More... | |
| TPatent & | SetPatent (void) |
| Select the variant. More... | |
| void | SetPatent (const TPatent &value) |
| Select the variant and set its data. More... | |
| bool | IsProtein_accession (void) const |
| Check if variant Protein_accession is selected. More... | |
| const TProtein_accession & | GetProtein_accession (void) const |
| Get the variant data. More... | |
| TProtein_accession & | SetProtein_accession (void) |
| Select the variant. More... | |
| void | SetProtein_accession (const TProtein_accession &value) |
| Select the variant and set its data. More... | |
| bool | IsNucleotide_accession (void) const |
| Check if variant Nucleotide_accession is selected. More... | |
| const TNucleotide_accession & | GetNucleotide_accession (void) const |
| Get the variant data. More... | |
| TNucleotide_accession & | SetNucleotide_accession (void) |
| Select the variant. More... | |
| void | SetNucleotide_accession (const TNucleotide_accession &value) |
| Select the variant and set its data. More... | |
| bool | IsDoi (void) const |
| Check if variant Doi is selected. More... | |
| const TDoi & | GetDoi (void) const |
| Get the variant data. More... | |
| TDoi & | SetDoi (void) |
| Select the variant. More... | |
| void | SetDoi (const TDoi &value) |
| Select the variant and set its data. More... | |
| bool | IsCitation (void) const |
| Check if variant Citation is selected. More... | |
| const TCitation & | GetCitation (void) const |
| Get the variant data. More... | |
| TCitation & | SetCitation (void) |
| Select the variant. More... | |
| void | SetCitation (const TCitation &value) |
| Select the variant and set its data. More... | |
| Public Member Functions inherited from CSerialObject | |
| CSerialObject (void) | |
| virtual | ~CSerialObject (void) |
| virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
| virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| Set object to copy of another one. More... | |
| virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| Check if both objects contain the same values. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| void | ThrowUnassigned (TMemberIndex index) const |
| void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
| bool | HasNamespaceName (void) const |
| Check if object data type has namespace name. More... | |
| const string & | GetNamespaceName (void) const |
| Get namespace name. More... | |
| bool | HasNamespacePrefix (void) const |
| Check if data type has namespace prefix. More... | |
| const string & | GetNamespacePrefix (void) const |
| Get namespace prefix. More... | |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
Private Types | |
| typedef CPC_XRefData_Base | Tparent |
Private Member Functions | |
| CPC_XRefData (const CPC_XRefData &value) | |
| CPC_XRefData & | operator= (const CPC_XRefData &value) |
Additional Inherited Members | |
| Public Types inherited from CPC_XRefData_Base | |
| enum | E_Choice { e_not_set = 0 , e_Regid , e_Rn , e_Mesh , e_Pmid , e_Gi , e_Mmdb , e_Sid , e_Cid , e_Dburl , e_Sburl , e_Asurl , e_Protein_gi , e_Nucleotide_gi , e_Taxonomy , e_Aid , e_Mim , e_Gene , e_Probe , e_Biosystem , e_Geogse , e_Geogsm , e_Patent , e_Protein_accession , e_Nucleotide_accession , e_Doi , e_Citation } |
| Choice variants. More... | |
| enum | E_ChoiceStopper { e_MaxChoice = 27 } |
| Maximum+1 value of the choice variant enumerator. More... | |
| typedef string | TRegid |
| typedef string | TRn |
| typedef string | TMesh |
| typedef int | TPmid |
| typedef int | TGi |
| typedef int | TMmdb |
| typedef int | TSid |
| typedef int | TCid |
| typedef string | TDburl |
| typedef string | TSburl |
| typedef string | TAsurl |
| typedef int | TProtein_gi |
| typedef int | TNucleotide_gi |
| typedef int | TTaxonomy |
| typedef int | TAid |
| typedef int | TMim |
| typedef int | TGene |
| typedef int | TProbe |
| typedef int | TBiosystem |
| typedef int | TGeogse |
| typedef int | TGeogsm |
| typedef string | TPatent |
| typedef string | TProtein_accession |
| typedef string | TNucleotide_accession |
| typedef string | TDoi |
| typedef string | TCitation |
| Public Types inherited from CObject | |
| enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
| Control filling of newly allocated memory. More... | |
| typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More... | |
| typedef atomic< Uint8 > | TCounter |
| Counter type is CAtomiCounter. More... | |
| typedef Uint8 | TCount |
| Alias for value type of counter. More... | |
| Static Public Member Functions inherited from CPC_XRefData_Base | |
| static string | SelectionName (E_Choice index) |
| Retrieve selection name (for diagnostic purposes). More... | |
| Static Public Member Functions inherited from CSerialObject | |
| static void | SetVerifyDataThread (ESerialVerifyData verify) |
| static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
| static string | UnassignedString (void) |
| static CStringUTF8 | UnassignedStringUTF8 (void) |
| static char | UnassignedByte (void) |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
| Static Public Attributes inherited from CSerialObject | |
| static const char * | ms_UnassignedStr = "<*unassigned*>" |
| static const char | ms_UnassignedByte = char(0xcd) |
| Static Public Attributes inherited from CObject | |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More... | |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More... | |
| static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More... | |
| static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More... | |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
| static const TCount | eCounterStateMask |
| Valid object, and object in heap. More... | |
| Protected Member Functions inherited from CObject | |
| virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More... | |
Detailed Description
CPC_XRefData –.
Definition at line 65 of file PC_XRefData.hpp.
The documentation for this class was generated from the following files:
- include/objects/pcsubstance/PC_XRefData.hpp
- src/objects/pcsubstance/PC_XRefData.cpp
