Caenorhabditis elegans predicted gene 3A712.
SUMMARY back to top
Map on chromosome III, links to other databases and other names
Map: This gene 3A712 maps on chomosome III at position -27.02 (interpolated).
Links to: WormBase, RNAiDB.
Other names: The gene is also known in Wormbase by its cosmid.number name C29F9.8.
          Complete gene on genome diagram: back to top
Please choose between the zoomable GIF version., and the HTML5/SVG version.
This diagram shows in true scale the gene on the genome, the mRNAs and the cDNA clones.
Compact gene diagram back to top
Gene 3A712 5' 3' encoded on minus strand of chromosome III from 97,725 to 95,393 0bp 0 Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron, the small numbers show the support of the introns in deep sequencing (with details in mouse-over) . Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
Sequences: click on the numbers to get the DNA back to top
Summaries of AceView transcripts and proteins back to top
Predicted protein properties back to top
Gene neighbors and Navigator on chromosome III back to top
3A705 D C P 3A733 C R 3A735 C I P 3A704 3A712 3A714 D C R P 3A690 D C I R P pat-4 C fbxa-57 C fbxa-58 5kb 0 3A705, 20 accessions 3A733, 15 accessions 3A735, 14 accessions 3A704, 4 accessions 3A712, 0 accession 3A714, 0 accession 3A690, 62 accessions, 7 variants pat-4, 42 accessions fbxa-57, 9 accessions 4 variants fbxa-58, 2 accessions 2 variants ZOOM OUT                 D:disease, C:conserved, I:interactions, R:regulation, P:publications         Read more...
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes

To mine knowledge about the gene, please click the 'Gene Summary' or the 'Function, regulation, related genes ' tab at the top of the page. The 'Gene Summary' page includes all we learnt about the gene, functional annotations of neighboring genes, maps, links to other sites and the bibliography. The 'Function, regulation, related genes ' page includes Diseases (D), Pathways, GO annotations, conserved domains (C), interactions (I) reference into function, and pointers to all genes with the same functional annotation.
To see the mRNA diagram, sequence and annotation, click the 'mRNA' tab. To examine expression data from all cDNAs clustered in this gene by AceView, click the 'Expression tissue'.

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