Homo sapiens complex locus ELAC2, encoding elaC homolog 2 (E. coli).
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SUMMARY back to top
RefSeq summary
[ELAC2] The protein encoded by this gene has a C-terminal domain with tRNA 3and#8242; processing endoribonuclease activity, which catalyzes the removal of the 3' trailer from precursor tRNAs. The protein also interacts with activated Smad family member 2 (Smad2) and its nuclear partner forkhead box H1 (also known as FAST-1), and reduced expression can suppress transforming growth factor-beta induced growth arrest. Mutations in this gene result in an increased risk of prostate cancer. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq].

RefSeq annotates 3 representative transcripts (NM included in AceView variants .a, .b and .d), but Homo sapiens cDNA sequences in GenBank, dbEST, Trace and SRA, filtered against clone rearrangements, coaligned on the genome and clustered in a minimal non-redundant way by the manually supervised AceView program, support at least 18 spliced variants.

AceView synopsis, each blue text links to tables and details
Note that this locus is complex: it appears to produce several proteins with no sequence overlap.
Expression: According to AceView, this gene is expressed at very high level, 4.9 times the average gene in this release. The sequence of this gene is defined by 553 GenBank accessions from 516 cDNA clones, some from brain (seen 46 times), tongue, tumor tissue (29), testis (27), amygdala (17), cerebellum (17), thalamus (17), lymph (13) and 127 other tissues.
Alternative mRNA variants and regulation: The gene contains 38 distinct introns (36 gt-ag, 2 gc-ag). Transcription produces 21 different mRNAs, 18 alternatively spliced variants and 3 unspliced forms. There are 5 probable alternative promotors, 3 non overlapping alternative last exons and 14 validated alternative polyadenylation sites (see the diagram). The mRNAs appear to differ by truncation of the 5' end, truncation of the 3' end, presence or absence of 3 cassette exons, overlapping exons with different boundaries, splicing versus retention of 12 introns. 878 bp of this gene are antisense to spliced gene RICH2, raising the possibility of regulated alternate expression.
2 variants were isolated in vivo, despite the fact that they are predicted targets of nonsense mediated mRNA decay (NMD).
Function: There are 39 articles specifically referring to this gene in PubMed. Functionally, the gene has been tested for association to diseases (OMIM: Prostate cancer; Other sources: Genetic Predisposition to Disease; Prostate cancer, susceptibility to; Prostatic Neoplasms) and proposed to participate in a process (tRNA processing). Proteins are expected to have molecular functions (protein binding, endonuclease activity, hydrolase activity, metal ion binding) and to localize in various compartments (endoplasmic reticulum, membrane, mitochondrion, nucleus). Putative protein interactors have been described (ASCC2, CTBP1, CTBP2, CUX1, ISCA1ANDC9ORF153ANDGOLM1, NDUFA7ANDCD320, PUF60, RING1).
Protein coding potential: 18 spliced mRNAs putatively encode good proteins, altogether 19 different isoforms (10 complete, 3 COOH complete, 6 partial), some containing Metallo-beta-lactamase superfamily domain [Pfam]. The remaining 3 mRNA variants (3 unspliced) appear not to encode good proteins. Finally proteins from this gene may be modulated by acetylation; phosphorylation; ubiquitination, as detailed at PhosphoSite.

Please quote: AceView: a comprehensive cDNA-supported gene and transcripts annotation, Genome Biology 2006, 7(Suppl 1):S12.
Map on chromosome 17, links to other databases and other names
Map: This gene ELAC2 maps on chromosome 17, at 17p11.2 according to Entrez Gene. In AceView, it covers 27.30 kb, from 12921504 to 12894200 (NCBI 37, August 2010), on the reverse strand.
Links to: manual annotations from OMIM_176807, PhosphoSite, the SNP view, gene overviews from Gene 60528, GeneCards, expression data from Gene 60528, molecular and other annotations from UCSC, or our GOLD analysis.
The previous AceView annotation is here.
Other names: The gene is also known as ELAC2, ELC2, HPC2, FLJ10530, FLJ36693, FLJ42848 or LOC60528, peeglor. It has been described as zinc phosphodiesterase ELAC protein 2, RNase Z 2, tRNase Z 2, ribonuclease Z 2, OTTHUMP00000064670, tRNase Z (long form), tRNA 3 endonuclease 2, elaC homolog protein 2, heredity prostate cancer protein 2, putative prostate cancer susceptibility protein HPC2/ELAC2.
EC number: This gene encodes protein number: 3.1.26.11.
Closest AceView homologs in other species ?
The closest mouse gene, according to BlastP, is the AceView gene Elac2 (e= 10-127).
The closest C.elegans gene, according to BlastP, is the AceView/WormGene hoe-1 (e=3 10-33), which may contain interesting functional annotation.
The closest A.thaliana genes, according to BlastP, are the AceView genes AT3G16260 (e=2 10-29), AT1G52160 (e=5 10-29), which may contain interesting functional annotation
RNA_seq discoveries back to top
Expression/conservation in primates tissues evaluated by cross-mapping to human. back to top
ELAC2 Gene expression in 15 primates, 16 tissues, from the NHPRTR project in sFPKM BAB SkeletalMuscle WholeBlood CHP Kidney Liver Lung Spleen CMC CMM Cerebellum HUM Brain Colon Heart LymphNode Ovary Testis JMI BoneMarrow MLM OWL PTM RMC RMI Pituitary SQM Thymus MST SMY RTL 7.64 5.04 6.65 4.39 2.19 5.79 7.13 4.10 8.78 10.8 8.19 16.4 12.4 26.6 23.2 20.2 8.19 16.4 30.6 17.6 18.8 14.3 3.82 1.66 2.05 1.66 3.82 2.90 3.82 3.33 5.40 4.10 4.10 7.13 5.79 5.04 6.21 13.3 9.41 10.1 6.21 5.04 7.64 11.6 8.19 5.40 8.78 7.64 5.40 4.39 3.82 5.79 3.82 6.21 4.71 2.90 7.64 6.65 4.71 4.39 4.71 8.78 6.65 3.82 4.39 5.04 6.65 8.78 7.64 6.21 9.41 12.4 6.65 12.4 11.6 10.1 8.78 8.19 7.13 7.13 8.78 7.64 10.8 10.1 10.8 10.1 10.1 11.6 4.39 5.04 6.65 6.65 7.64 6.65 5.40 5.40 8.19 6.65 7.13 8.19 5.79 5.40 5.04 5.40 5.04 5.79 6.21 6.65 4.39 5.04 5.04 8.78 10.1 10.8 9.41 7.64 10.8 8.78 10.1 8.78 10.1 11.6 14.3 8.78 10.1 10.8 9.41 20.2 10.8 8.78 8.78 6.21 5.40 11.6 10.1 11.6 5.40 5.04 2.05 2.52 5.79 10.8 8.19 5.79 7.64 7.64 8.19 10.8 6.65 8.19 0.78 8.78 5.79 12.4 4.71 5.40 1.35 Expression quantiles None Weak 1 2 3 4 5 6 7 8 10 20 This gene All genes log2 distributions RNA-seq gene expression profile across 16 selected tissues from the Non-Human Primates Reference Transcriptome Resource (link to NHPRTR project).
- Primates: Apes (HUM: Human (Illumina BodyMap 2), CHP: Chimpanzee), Old World monkeys (PTM: Pig-Tailed Macaque, JMI Japanese Macaque, RMI Rhesus Macaque Indian, RMC Rhesus Macaque Chinese, CMM Cynomolgus Macaque Mauritian, CMC Cynomolgus Macaque Chinese, BAB Olive Baboon, SMY Sooty Mangabey); New World monkeys (MST common Marmoset, SQM Squirrel Monkey, OWL Owl Monkey); and Lemurs (MLM Mouse Lemur, RTL Ring-Tailed Lemur).
- The level for significantly expressed genes is color coded in 8 equal sized bins (light to dark green). Light gray is for weak not-accurately measured expression (2 to 8 reads above intergenic background); dark gray for no expression or no sequence conservation (0 read in gene). The plot to the right shows the distribution of measured expression values in all tissues for all genes (blue) and for this gene (green), in Magic index = log2(1000 sFPKM).
You may also examine the strand-specific genome coverage plots on the experimental AceView/Magic hub at UCSC, by tissue or by species. Tracks may be slow to load; please reload if some tracks come up yellow-greenish, and thanks to UCSC for the great work!.
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          Complete gene on genome diagram: back to top
Please choose between the zoomable GIF version., and the HTML5/SVG version.
This diagram shows in true scale the gene on the genome, the mRNAs and the cDNA clones.
Compact gene diagram back to top
Gene ELAC2 5' 3' encoded on minus strand of chromosome 17 from 12,921,504 to 12,894,200 40k 36k 70k 67k 68k 84k a [NM] 40k 36k 70k 67k 68k 84k b [NM] 40k 36k 70k 67k 68k 84k c 2496 40k 36k 70k 67k 68k 84k d [NM] 40k 36k 70k 67k 68k 84k e 40k 36k 70k 67k 68k 84k f 20 o 36k 70k 67k 68k 84k g 40k 36k 70k 67k 68k 84k h n 70k 67k 68k 84k i 40k 36k 452 67k 68k j 5 40k 36k k s-u 40k l 67k q u-u 2496 2 p 68k 84k m 70k 67k r t-u 5kb 0 362 bp exon 362 bp exon 581 bp [gt-ag] intron 283 GenBank accessions 49566 RNA-seq supporting reads 8946 UHR pooled cells 4118 Brain 3530 Blood 32640 Neuroblastoma 332 Other (also 3465 Primates bodymap) 51 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 120 bp exon 991 bp [gt-ag] intron 81 GenBank accessions 58248 RNA-seq supporting reads 12473 UHR pooled cells 5984 Brain 4827 Blood 34507 Neuroblastoma 457 Other (also 1170 Primates bodymap) 59 bp exon 4633 bp [gt-ag] intron 61 GenBank accessions 40823 RNA-seq supporting reads 8230 UHR pooled cells 3929 Brain 6050 Blood 22294 Neuroblastoma 320 Other (also 2390 Primates bodymap) 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 73 bp exon 651 bp [gt-ag] intron 57 GenBank accessions 36703 RNA-seq supporting reads 7541 UHR pooled cells 3831 Brain 2591 Blood 22323 Neuroblastoma 417 Other (also 2295 Primates bodymap) 113 bp exon 1414 bp [gt-ag] intron 61 GenBank accessions 74292 RNA-seq supporting reads 15709 UHR pooled cells 7510 Brain 4289 Blood 45979 Neuroblastoma 805 Other (also 4962 Primates bodymap) 96 bp exon 899 bp [gt-ag] intron 54 GenBank accessions 70806 RNA-seq supporting reads 14539 UHR pooled cells 6872 Brain 4776 Blood 43828 Neuroblastoma 791 Other (also 4305 Primates bodymap) 139 bp exon 81 bp [gt-ag] intron 45 GenBank accessions 86074 RNA-seq supporting reads 18466 UHR pooled cells 8496 Brain 5165 Blood 53330 Neuroblastoma 617 Other (also 3323 Primates bodymap) 86 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 139 bp exon 568 bp [gt-ag] intron 57 GenBank accessions 71969 RNA-seq supporting reads 15318 UHR pooled cells 7211 Brain 3826 Blood 45129 Neuroblastoma 485 Other (also 3208 Primates bodymap) 39 bp exon 127 bp [gt-ag] intron 62 GenBank accessions 87948 RNA-seq supporting reads 18252 UHR pooled cells 8501 Brain 4652 Blood 55955 Neuroblastoma 588 Other (also 3196 Primates bodymap) 110 bp exon 640 bp [gt-ag] intron 62 GenBank accessions 82501 RNA-seq supporting reads 16999 UHR pooled cells 7980 Brain 5355 Blood 51553 Neuroblastoma 614 Other (also 2835 Primates bodymap) 100 bp exon 78 bp [gt-ag] intron 61 GenBank accessions 76850 RNA-seq supporting reads 14550 UHR pooled cells 8079 Brain 3757 Blood 49835 Neuroblastoma 629 Other (also 3402 Primates bodymap) 121 bp exon 260 bp [gt-ag] intron 64 GenBank accessions 77721 RNA-seq supporting reads 16408 UHR pooled cells 7714 Brain 4145 Blood 48928 Neuroblastoma 526 Other (also 4687 Primates bodymap) 79 bp exon 593 bp [gt-ag] intron 62 GenBank accessions 83944 RNA-seq supporting reads 17958 UHR pooled cells 8581 Brain 4887 Blood 51901 Neuroblastoma 617 Other (also 4428 Primates bodymap) 145 bp exon 641 bp [gt-ag] intron 66 GenBank accessions 91673 RNA-seq supporting reads 20483 UHR pooled cells 9210 Brain 3202 Blood 58207 Neuroblastoma 571 Other (also 4468 Primates bodymap) 1433 bp exon 9 accessions, NM_018127.6 some from lymph (seen 3 times) lymphoma, cell line (3) lung, small cell carcinoma (2) Validated 3' end, 1 accession Validated 3' end, 3 accessions Validated 3' end, 1 accession 1433 bp exon 362 bp exon 362 bp exon 581 bp [gt-ag] intron 283 GenBank accessions 49566 RNA-seq supporting reads 8946 UHR pooled cells 4118 Brain 3530 Blood 32640 Neuroblastoma 332 Other (also 3465 Primates bodymap) 51 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 120 bp exon 991 bp [gt-ag] intron 81 GenBank accessions 58248 RNA-seq supporting reads 12473 UHR pooled cells 5984 Brain 4827 Blood 34507 Neuroblastoma 457 Other (also 1170 Primates bodymap) 59 bp exon 4633 bp [gt-ag] intron 61 GenBank accessions 40823 RNA-seq supporting reads 8230 UHR pooled cells 3929 Brain 6050 Blood 22294 Neuroblastoma 320 Other (also 2390 Primates bodymap) 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 73 bp exon 651 bp [gt-ag] intron 57 GenBank accessions 36703 RNA-seq supporting reads 7541 UHR pooled cells 3831 Brain 2591 Blood 22323 Neuroblastoma 417 Other (also 2295 Primates bodymap) 113 bp exon 1414 bp [gt-ag] intron 61 GenBank accessions 74292 RNA-seq supporting reads 15709 UHR pooled cells 7510 Brain 4289 Blood 45979 Neuroblastoma 805 Other (also 4962 Primates bodymap) 96 bp exon 899 bp [gt-ag] intron 54 GenBank accessions 70806 RNA-seq supporting reads 14539 UHR pooled cells 6872 Brain 4776 Blood 43828 Neuroblastoma 791 Other (also 4305 Primates bodymap) 139 bp exon 84 bp [gt-ag] intron 3 GenBank accessions 3746 RNA-seq supporting reads 886 UHR pooled cells 332 Brain 250 Blood 2255 Neuroblastoma 23 Other (also 593 Primates bodymap) 83 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 139 bp exon 568 bp [gt-ag] intron 57 GenBank accessions 71969 RNA-seq supporting reads 15318 UHR pooled cells 7211 Brain 3826 Blood 45129 Neuroblastoma 485 Other (also 3208 Primates bodymap) 39 bp exon 127 bp [gt-ag] intron 62 GenBank accessions 87948 RNA-seq supporting reads 18252 UHR pooled cells 8501 Brain 4652 Blood 55955 Neuroblastoma 588 Other (also 3196 Primates bodymap) 110 bp exon 640 bp [gt-ag] intron 62 GenBank accessions 82501 RNA-seq supporting reads 16999 UHR pooled cells 7980 Brain 5355 Blood 51553 Neuroblastoma 614 Other (also 2835 Primates bodymap) 100 bp exon 78 bp [gt-ag] intron 61 GenBank accessions 76850 RNA-seq supporting reads 14550 UHR pooled cells 8079 Brain 3757 Blood 49835 Neuroblastoma 629 Other (also 3402 Primates bodymap) 121 bp exon 260 bp [gt-ag] intron 64 GenBank accessions 77721 RNA-seq supporting reads 16408 UHR pooled cells 7714 Brain 4145 Blood 48928 Neuroblastoma 526 Other (also 4687 Primates bodymap) 79 bp exon 593 bp [gt-ag] intron 62 GenBank accessions 83944 RNA-seq supporting reads 17958 UHR pooled cells 8581 Brain 4887 Blood 51901 Neuroblastoma 617 Other (also 4428 Primates bodymap) 145 bp exon 641 bp [gt-ag] intron 66 GenBank accessions 91673 RNA-seq supporting reads 20483 UHR pooled cells 9210 Brain 3202 Blood 58207 Neuroblastoma 571 Other (also 4468 Primates bodymap) 1433 bp exon 73 accessions, NM_173717.1 some from brain (seen 8 times) lymph (8), lymphoma, cell line (7) ovary (6), placenta (4) capped 5' end, 18 accessions Validated 3' end, 1 accession Validated 3' end, 1 accession 1433 bp exon 270 bp exon 270 bp exon 638 bp [gc-ag] intron 2 GenBank accessions 28 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 120 bp exon 991 bp [gt-ag] intron 81 GenBank accessions 58248 RNA-seq supporting reads 12473 UHR pooled cells 5984 Brain 4827 Blood 34507 Neuroblastoma 457 Other (also 1170 Primates bodymap) 59 bp exon 4633 bp [gt-ag] intron 61 GenBank accessions 40823 RNA-seq supporting reads 8230 UHR pooled cells 3929 Brain 6050 Blood 22294 Neuroblastoma 320 Other (also 2390 Primates bodymap) 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 73 bp exon 651 bp [gt-ag] intron 57 GenBank accessions 36703 RNA-seq supporting reads 7541 UHR pooled cells 3831 Brain 2591 Blood 22323 Neuroblastoma 417 Other (also 2295 Primates bodymap) 113 bp exon 1414 bp [gt-ag] intron 61 GenBank accessions 74292 RNA-seq supporting reads 15709 UHR pooled cells 7510 Brain 4289 Blood 45979 Neuroblastoma 805 Other (also 4962 Primates bodymap) 96 bp exon 899 bp [gt-ag] intron 54 GenBank accessions 70806 RNA-seq supporting reads 14539 UHR pooled cells 6872 Brain 4776 Blood 43828 Neuroblastoma 791 Other (also 4305 Primates bodymap) 139 bp exon 81 bp [gt-ag] intron 45 GenBank accessions 86074 RNA-seq supporting reads 18466 UHR pooled cells 8496 Brain 5165 Blood 53330 Neuroblastoma 617 Other (also 3323 Primates bodymap) 86 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 139 bp exon 568 bp [gt-ag] intron 57 GenBank accessions 71969 RNA-seq supporting reads 15318 UHR pooled cells 7211 Brain 3826 Blood 45129 Neuroblastoma 485 Other (also 3208 Primates bodymap) 39 bp exon 127 bp [gt-ag] intron 62 GenBank accessions 87948 RNA-seq supporting reads 18252 UHR pooled cells 8501 Brain 4652 Blood 55955 Neuroblastoma 588 Other (also 3196 Primates bodymap) 110 bp exon 640 bp [gt-ag] intron 62 GenBank accessions 82501 RNA-seq supporting reads 16999 UHR pooled cells 7980 Brain 5355 Blood 51553 Neuroblastoma 614 Other (also 2835 Primates bodymap) 100 bp exon 78 bp [gt-ag] intron 61 GenBank accessions 76850 RNA-seq supporting reads 14550 UHR pooled cells 8079 Brain 3757 Blood 49835 Neuroblastoma 629 Other (also 3402 Primates bodymap) 121 bp exon 260 bp [gt-ag] intron 64 GenBank accessions 77721 RNA-seq supporting reads 16408 UHR pooled cells 7714 Brain 4145 Blood 48928 Neuroblastoma 526 Other (also 4687 Primates bodymap) 79 bp exon 593 bp [gt-ag] intron 62 GenBank accessions 83944 RNA-seq supporting reads 17958 UHR pooled cells 8581 Brain 4887 Blood 51901 Neuroblastoma 617 Other (also 4428 Primates bodymap) 145 bp exon 641 bp [gt-ag] intron 66 GenBank accessions 91673 RNA-seq supporting reads 20483 UHR pooled cells 9210 Brain 3202 Blood 58207 Neuroblastoma 571 Other (also 4468 Primates bodymap) 1837 bp exon 7 accessions, some from amygdala (seen 2 times) hypothalamus (once), leg muscle (once) leukopheresis (once) lung (once) capped 5' end, 1 accession Validated 3' end, 2 accessions Validated 3' end, 1 accession 1837 bp exon 485 bp exon 485 bp exon 581 bp [gt-ag] intron 283 GenBank accessions 49566 RNA-seq supporting reads 8946 UHR pooled cells 4118 Brain 3530 Blood 32640 Neuroblastoma 332 Other (also 3465 Primates bodymap) 51 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 2535 bp [gt-ag] intron 9 GenBank accessions 2487 RNA-seq supporting reads 372 UHR pooled cells 308 Brain 606 Blood 1197 Neuroblastoma 4 Other (also 27 Primates bodymap) 59 bp exon 4633 bp [gt-ag] intron 61 GenBank accessions 40823 RNA-seq supporting reads 8230 UHR pooled cells 3929 Brain 6050 Blood 22294 Neuroblastoma 320 Other (also 2390 Primates bodymap) 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 73 bp exon 651 bp [gt-ag] intron 57 GenBank accessions 36703 RNA-seq supporting reads 7541 UHR pooled cells 3831 Brain 2591 Blood 22323 Neuroblastoma 417 Other (also 2295 Primates bodymap) 113 bp exon 1414 bp [gt-ag] intron 61 GenBank accessions 74292 RNA-seq supporting reads 15709 UHR pooled cells 7510 Brain 4289 Blood 45979 Neuroblastoma 805 Other (also 4962 Primates bodymap) 96 bp exon 899 bp [gt-ag] intron 54 GenBank accessions 70806 RNA-seq supporting reads 14539 UHR pooled cells 6872 Brain 4776 Blood 43828 Neuroblastoma 791 Other (also 4305 Primates bodymap) 139 bp exon 81 bp [gt-ag] intron 45 GenBank accessions 86074 RNA-seq supporting reads 18466 UHR pooled cells 8496 Brain 5165 Blood 53330 Neuroblastoma 617 Other (also 3323 Primates bodymap) 86 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 139 bp exon 568 bp [gt-ag] intron 57 GenBank accessions 71969 RNA-seq supporting reads 15318 UHR pooled cells 7211 Brain 3826 Blood 45129 Neuroblastoma 485 Other (also 3208 Primates bodymap) 39 bp exon 127 bp [gt-ag] intron 62 GenBank accessions 87948 RNA-seq supporting reads 18252 UHR pooled cells 8501 Brain 4652 Blood 55955 Neuroblastoma 588 Other (also 3196 Primates bodymap) 110 bp exon 640 bp [gt-ag] intron 62 GenBank accessions 82501 RNA-seq supporting reads 16999 UHR pooled cells 7980 Brain 5355 Blood 51553 Neuroblastoma 614 Other (also 2835 Primates bodymap) 100 bp exon 78 bp [gt-ag] intron 61 GenBank accessions 76850 RNA-seq supporting reads 14550 UHR pooled cells 8079 Brain 3757 Blood 49835 Neuroblastoma 629 Other (also 3402 Primates bodymap) 121 bp exon 260 bp [gt-ag] intron 64 GenBank accessions 77721 RNA-seq supporting reads 16408 UHR pooled cells 7714 Brain 4145 Blood 48928 Neuroblastoma 526 Other (also 4687 Primates bodymap) 79 bp exon 593 bp [gt-ag] intron 62 GenBank accessions 83944 RNA-seq supporting reads 17958 UHR pooled cells 8581 Brain 4887 Blood 51901 Neuroblastoma 617 Other (also 4428 Primates bodymap) 145 bp exon 641 bp [gt-ag] intron 66 GenBank accessions 91673 RNA-seq supporting reads 20483 UHR pooled cells 9210 Brain 3202 Blood 58207 Neuroblastoma 571 Other (also 4468 Primates bodymap) 2158 bp exon 358 accessions, NM_001165962.1 some from brain (seen 33 times) tongue, tumor tissue (29) testis (17), amygdala (11) prostate (11) Validated 3' end, 1 accession Validated 3' end, 14 accessions Validated 3' end, 1 accession Validated 3' end, 2 accessions 2158 bp exon 178 bp exon 178 bp exon 291 bp [gc-ag] intron 1 GenBank accession 113 RNA-seq supporting reads 27 UHR pooled cells 26 Brain 56 Neuroblastoma 4 Other (also 1 Primates bodymap) 51 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 120 bp exon 991 bp [gt-ag] intron 81 GenBank accessions 58248 RNA-seq supporting reads 12473 UHR pooled cells 5984 Brain 4827 Blood 34507 Neuroblastoma 457 Other (also 1170 Primates bodymap) 59 bp exon 4633 bp [gt-ag] intron 61 GenBank accessions 40823 RNA-seq supporting reads 8230 UHR pooled cells 3929 Brain 6050 Blood 22294 Neuroblastoma 320 Other (also 2390 Primates bodymap) 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 73 bp exon 651 bp [gt-ag] intron 57 GenBank accessions 36703 RNA-seq supporting reads 7541 UHR pooled cells 3831 Brain 2591 Blood 22323 Neuroblastoma 417 Other (also 2295 Primates bodymap) 113 bp exon 1489 bp [gt-ag] intron 2 GenBank accessions 8 RNA-seq supporting reads 3 UHR pooled cells 1 Brain 2 Neuroblastoma 2 Other 21 bp exon 899 bp [gt-ag] intron 54 GenBank accessions 70806 RNA-seq supporting reads 14539 UHR pooled cells 6872 Brain 4776 Blood 43828 Neuroblastoma 791 Other (also 4305 Primates bodymap) 139 bp exon 81 bp [gt-ag] intron 45 GenBank accessions 86074 RNA-seq supporting reads 18466 UHR pooled cells 8496 Brain 5165 Blood 53330 Neuroblastoma 617 Other (also 3323 Primates bodymap) 86 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 139 bp exon 568 bp [gt-ag] intron 57 GenBank accessions 71969 RNA-seq supporting reads 15318 UHR pooled cells 7211 Brain 3826 Blood 45129 Neuroblastoma 485 Other (also 3208 Primates bodymap) 39 bp exon 127 bp [gt-ag] intron 62 GenBank accessions 87948 RNA-seq supporting reads 18252 UHR pooled cells 8501 Brain 4652 Blood 55955 Neuroblastoma 588 Other (also 3196 Primates bodymap) 110 bp exon 640 bp [gt-ag] intron 62 GenBank accessions 82501 RNA-seq supporting reads 16999 UHR pooled cells 7980 Brain 5355 Blood 51553 Neuroblastoma 614 Other (also 2835 Primates bodymap) 100 bp exon 78 bp [gt-ag] intron 61 GenBank accessions 76850 RNA-seq supporting reads 14550 UHR pooled cells 8079 Brain 3757 Blood 49835 Neuroblastoma 629 Other (also 3402 Primates bodymap) 121 bp exon 260 bp [gt-ag] intron 64 GenBank accessions 77721 RNA-seq supporting reads 16408 UHR pooled cells 7714 Brain 4145 Blood 48928 Neuroblastoma 526 Other (also 4687 Primates bodymap) 79 bp exon 593 bp [gt-ag] intron 62 GenBank accessions 83944 RNA-seq supporting reads 17958 UHR pooled cells 8581 Brain 4887 Blood 51901 Neuroblastoma 617 Other (also 4428 Primates bodymap) 145 bp exon 641 bp [gt-ag] intron 66 GenBank accessions 91673 RNA-seq supporting reads 20483 UHR pooled cells 9210 Brain 3202 Blood 58207 Neuroblastoma 571 Other (also 4468 Primates bodymap) 435 bp exon 3 accessions, some from uterus (seen 2 times) thalamus (once) 435 bp exon 102 bp exon 102 bp exon 460 bp [gt-ag] intron 2 GenBank accessions 299 RNA-seq supporting reads 72 UHR pooled cells 61 Brain 2 Blood 150 Neuroblastoma 14 Other (also 1 Primates bodymap) 51 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 120 bp exon 991 bp [gt-ag] intron 81 GenBank accessions 58248 RNA-seq supporting reads 12473 UHR pooled cells 5984 Brain 4827 Blood 34507 Neuroblastoma 457 Other (also 1170 Primates bodymap) 59 bp exon 4633 bp [gt-ag] intron 61 GenBank accessions 40823 RNA-seq supporting reads 8230 UHR pooled cells 3929 Brain 6050 Blood 22294 Neuroblastoma 320 Other (also 2390 Primates bodymap) 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 73 bp exon 651 bp [gt-ag] intron 57 GenBank accessions 36703 RNA-seq supporting reads 7541 UHR pooled cells 3831 Brain 2591 Blood 22323 Neuroblastoma 417 Other (also 2295 Primates bodymap) 113 bp exon 1414 bp [gt-ag] intron 61 GenBank accessions 74292 RNA-seq supporting reads 15709 UHR pooled cells 7510 Brain 4289 Blood 45979 Neuroblastoma 805 Other (also 4962 Primates bodymap) 96 bp exon 899 bp [gt-ag] intron 54 GenBank accessions 70806 RNA-seq supporting reads 14539 UHR pooled cells 6872 Brain 4776 Blood 43828 Neuroblastoma 791 Other (also 4305 Primates bodymap) 139 bp exon 81 bp [gt-ag] intron 45 GenBank accessions 86074 RNA-seq supporting reads 18466 UHR pooled cells 8496 Brain 5165 Blood 53330 Neuroblastoma 617 Other (also 3323 Primates bodymap) 86 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 139 bp exon 568 bp [gt-ag] intron 57 GenBank accessions 71969 RNA-seq supporting reads 15318 UHR pooled cells 7211 Brain 3826 Blood 45129 Neuroblastoma 485 Other (also 3208 Primates bodymap) 39 bp exon 127 bp [gt-ag] intron 62 GenBank accessions 87948 RNA-seq supporting reads 18252 UHR pooled cells 8501 Brain 4652 Blood 55955 Neuroblastoma 588 Other (also 3196 Primates bodymap) 110 bp exon 640 bp [gt-ag] intron 62 GenBank accessions 82501 RNA-seq supporting reads 16999 UHR pooled cells 7980 Brain 5355 Blood 51553 Neuroblastoma 614 Other (also 2835 Primates bodymap) 100 bp exon 84 bp [gt-ag] intron 2 GenBank accessions 993 RNA-seq supporting reads 213 UHR pooled cells 132 Brain 11 Blood 627 Neuroblastoma 10 Other (also 8 Primates bodymap) 115 bp exon 260 bp [gt-ag] intron 64 GenBank accessions 77721 RNA-seq supporting reads 16408 UHR pooled cells 7714 Brain 4145 Blood 48928 Neuroblastoma 526 Other (also 4687 Primates bodymap) 79 bp exon 593 bp [gt-ag] intron 62 GenBank accessions 83944 RNA-seq supporting reads 17958 UHR pooled cells 8581 Brain 4887 Blood 51901 Neuroblastoma 617 Other (also 4428 Primates bodymap) 145 bp exon 641 bp [gt-ag] intron 66 GenBank accessions 91673 RNA-seq supporting reads 20483 UHR pooled cells 9210 Brain 3202 Blood 58207 Neuroblastoma 571 Other (also 4468 Primates bodymap) 653 bp exon 4 accessions, some from B cells (ramos cell line) cot 25-normalized (seen once) testis (once) 653 bp exon 267 bp exon 267 bp exon 581 bp [gt-ag] intron 283 GenBank accessions 49566 RNA-seq supporting reads 8946 UHR pooled cells 4118 Brain 3530 Blood 32640 Neuroblastoma 332 Other (also 3465 Primates bodymap) 51 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 2492 bp [gt-ag] intron 1 GenBank accession 19 RNA-seq supporting reads 3 UHR pooled cells 4 Brain 12 Neuroblastoma (also 4 Primates bodymap) 69 bp exon 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 1 accession from cerebellum 59 bp exon 625 bp exon 625 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 73 bp exon 651 bp [gt-ag] intron 57 GenBank accessions 36703 RNA-seq supporting reads 7541 UHR pooled cells 3831 Brain 2591 Blood 22323 Neuroblastoma 417 Other (also 2295 Primates bodymap) 113 bp exon 1414 bp [gt-ag] intron 61 GenBank accessions 74292 RNA-seq supporting reads 15709 UHR pooled cells 7510 Brain 4289 Blood 45979 Neuroblastoma 805 Other (also 4962 Primates bodymap) 96 bp exon 899 bp [gt-ag] intron 54 GenBank accessions 70806 RNA-seq supporting reads 14539 UHR pooled cells 6872 Brain 4776 Blood 43828 Neuroblastoma 791 Other (also 4305 Primates bodymap) 139 bp exon 81 bp [gt-ag] intron 45 GenBank accessions 86074 RNA-seq supporting reads 18466 UHR pooled cells 8496 Brain 5165 Blood 53330 Neuroblastoma 617 Other (also 3323 Primates bodymap) 86 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 139 bp exon 568 bp [gt-ag] intron 57 GenBank accessions 71969 RNA-seq supporting reads 15318 UHR pooled cells 7211 Brain 3826 Blood 45129 Neuroblastoma 485 Other (also 3208 Primates bodymap) 39 bp exon 127 bp [gt-ag] intron 62 GenBank accessions 87948 RNA-seq supporting reads 18252 UHR pooled cells 8501 Brain 4652 Blood 55955 Neuroblastoma 588 Other (also 3196 Primates bodymap) 110 bp exon 640 bp [gt-ag] intron 62 GenBank accessions 82501 RNA-seq supporting reads 16999 UHR pooled cells 7980 Brain 5355 Blood 51553 Neuroblastoma 614 Other (also 2835 Primates bodymap) 100 bp exon 78 bp [gt-ag] intron 61 GenBank accessions 76850 RNA-seq supporting reads 14550 UHR pooled cells 8079 Brain 3757 Blood 49835 Neuroblastoma 629 Other (also 3402 Primates bodymap) 121 bp exon 260 bp [gt-ag] intron 64 GenBank accessions 77721 RNA-seq supporting reads 16408 UHR pooled cells 7714 Brain 4145 Blood 48928 Neuroblastoma 526 Other (also 4687 Primates bodymap) 79 bp exon 593 bp [gt-ag] intron 62 GenBank accessions 83944 RNA-seq supporting reads 17958 UHR pooled cells 8581 Brain 4887 Blood 51901 Neuroblastoma 617 Other (also 4428 Primates bodymap) 145 bp exon 641 bp [gt-ag] intron 66 GenBank accessions 91673 RNA-seq supporting reads 20483 UHR pooled cells 9210 Brain 3202 Blood 58207 Neuroblastoma 571 Other (also 4468 Primates bodymap) 653 bp exon 2 accessions, some from cerebellum (seen 2 times) capped 5' end, 1 accession Validated 3' end, 1 accession 653 bp exon 788 bp exon 788 bp exon 788 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 120 bp exon 120 bp exon 991 bp [gt-ag] intron 81 GenBank accessions 58248 RNA-seq supporting reads 12473 UHR pooled cells 5984 Brain 4827 Blood 34507 Neuroblastoma 457 Other (also 1170 Primates bodymap) 59 bp exon 59 bp exon 4633 bp [gt-ag] intron 61 GenBank accessions 40823 RNA-seq supporting reads 8230 UHR pooled cells 3929 Brain 6050 Blood 22294 Neuroblastoma 320 Other (also 2390 Primates bodymap) 59 bp exon 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 73 bp exon 73 bp exon 651 bp [gt-ag] intron 57 GenBank accessions 36703 RNA-seq supporting reads 7541 UHR pooled cells 3831 Brain 2591 Blood 22323 Neuroblastoma 417 Other (also 2295 Primates bodymap) 113 bp exon 113 bp exon 1414 bp [gt-ag] intron 61 GenBank accessions 74292 RNA-seq supporting reads 15709 UHR pooled cells 7510 Brain 4289 Blood 45979 Neuroblastoma 805 Other (also 4962 Primates bodymap) 96 bp exon 96 bp exon 899 bp [gt-ag] intron 54 GenBank accessions 70806 RNA-seq supporting reads 14539 UHR pooled cells 6872 Brain 4776 Blood 43828 Neuroblastoma 791 Other (also 4305 Primates bodymap) 139 bp exon 139 bp exon 81 bp [gt-ag] intron 45 GenBank accessions 86074 RNA-seq supporting reads 18466 UHR pooled cells 8496 Brain 5165 Blood 53330 Neuroblastoma 617 Other (also 3323 Primates bodymap) 86 bp exon 86 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 746 bp exon 746 bp exon 746 bp exon 746 bp exon 127 bp [gt-ag] intron 62 GenBank accessions 87948 RNA-seq supporting reads 18252 UHR pooled cells 8501 Brain 4652 Blood 55955 Neuroblastoma 588 Other (also 3196 Primates bodymap) 110 bp exon 110 bp exon 640 bp [gt-ag] intron 62 GenBank accessions 82501 RNA-seq supporting reads 16999 UHR pooled cells 7980 Brain 5355 Blood 51553 Neuroblastoma 614 Other (also 2835 Primates bodymap) 100 bp exon 100 bp exon 78 bp [gt-ag] intron 61 GenBank accessions 76850 RNA-seq supporting reads 14550 UHR pooled cells 8079 Brain 3757 Blood 49835 Neuroblastoma 629 Other (also 3402 Primates bodymap) 121 bp exon 121 bp exon 260 bp [gt-ag] intron 64 GenBank accessions 77721 RNA-seq supporting reads 16408 UHR pooled cells 7714 Brain 4145 Blood 48928 Neuroblastoma 526 Other (also 4687 Primates bodymap) 79 bp exon 79 bp exon 593 bp [gt-ag] intron 62 GenBank accessions 83944 RNA-seq supporting reads 17958 UHR pooled cells 8581 Brain 4887 Blood 51901 Neuroblastoma 617 Other (also 4428 Primates bodymap) 145 bp exon 145 bp exon 641 bp [gt-ag] intron 66 GenBank accessions 91673 RNA-seq supporting reads 20483 UHR pooled cells 9210 Brain 3202 Blood 58207 Neuroblastoma 571 Other (also 4468 Primates bodymap) 653 bp exon 653 bp exon 12 accessions, some from thalamus (seen 4 times) fibrotheoma (2), ovary (2) brain (once), liver (once) Validated 3' end, 1 accession 653 bp exon 147 bp exon 147 bp exon 375 bp [gt-ag] intron 1 GenBank accession 4 RNA-seq supporting reads 4 Brain 51 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 120 bp exon 991 bp [gt-ag] intron 81 GenBank accessions 58248 RNA-seq supporting reads 12473 UHR pooled cells 5984 Brain 4827 Blood 34507 Neuroblastoma 457 Other (also 1170 Primates bodymap) 1 accession 5 bp exon 1881 bp exon 899 bp [gt-ag] intron 54 GenBank accessions 70806 RNA-seq supporting reads 14539 UHR pooled cells 6872 Brain 4776 Blood 43828 Neuroblastoma 791 Other (also 4305 Primates bodymap) 134 bp exon 134 bp exon 86 bp [gt-ag] intron 1 GenBank accession 1419 RNA-seq supporting reads 236 UHR pooled cells 73 Brain 105 Blood 995 Neuroblastoma 10 Other (also 46 Primates bodymap) 86 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 139 bp exon 568 bp [gt-ag] intron 57 GenBank accessions 71969 RNA-seq supporting reads 15318 UHR pooled cells 7211 Brain 3826 Blood 45129 Neuroblastoma 485 Other (also 3208 Primates bodymap) 39 bp exon 127 bp [gt-ag] intron 62 GenBank accessions 87948 RNA-seq supporting reads 18252 UHR pooled cells 8501 Brain 4652 Blood 55955 Neuroblastoma 588 Other (also 3196 Primates bodymap) 110 bp exon 640 bp [gt-ag] intron 62 GenBank accessions 82501 RNA-seq supporting reads 16999 UHR pooled cells 7980 Brain 5355 Blood 51553 Neuroblastoma 614 Other (also 2835 Primates bodymap) 100 bp exon 78 bp [gt-ag] intron 61 GenBank accessions 76850 RNA-seq supporting reads 14550 UHR pooled cells 8079 Brain 3757 Blood 49835 Neuroblastoma 629 Other (also 3402 Primates bodymap) 121 bp exon 260 bp [gt-ag] intron 64 GenBank accessions 77721 RNA-seq supporting reads 16408 UHR pooled cells 7714 Brain 4145 Blood 48928 Neuroblastoma 526 Other (also 4687 Primates bodymap) 79 bp exon 593 bp [gt-ag] intron 62 GenBank accessions 83944 RNA-seq supporting reads 17958 UHR pooled cells 8581 Brain 4887 Blood 51901 Neuroblastoma 617 Other (also 4428 Primates bodymap) 145 bp exon 641 bp [gt-ag] intron 66 GenBank accessions 91673 RNA-seq supporting reads 20483 UHR pooled cells 9210 Brain 3202 Blood 58207 Neuroblastoma 571 Other (also 4468 Primates bodymap) 653 bp exon 12 accessions, some from ovarian tumor (seen 3 times) ovary (3), hippocampus (2) thymus (2), breast (once) 653 bp exon 136 bp exon 136 bp exon 445 bp [gt-ag] intron 34 GenBank accessions 4269 RNA-seq supporting reads 921 UHR pooled cells 756 Brain 55 Blood 2453 Neuroblastoma 84 Other (also 17 Primates bodymap) 51 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 120 bp exon 991 bp [gt-ag] intron 81 GenBank accessions 58248 RNA-seq supporting reads 12473 UHR pooled cells 5984 Brain 4827 Blood 34507 Neuroblastoma 457 Other (also 1170 Primates bodymap) 59 bp exon 4633 bp [gt-ag] intron 61 GenBank accessions 40823 RNA-seq supporting reads 8230 UHR pooled cells 3929 Brain 6050 Blood 22294 Neuroblastoma 320 Other (also 2390 Primates bodymap) 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 73 bp exon 651 bp [gt-ag] intron 57 GenBank accessions 36703 RNA-seq supporting reads 7541 UHR pooled cells 3831 Brain 2591 Blood 22323 Neuroblastoma 417 Other (also 2295 Primates bodymap) 113 bp exon 1414 bp [gt-ag] intron 61 GenBank accessions 74292 RNA-seq supporting reads 15709 UHR pooled cells 7510 Brain 4289 Blood 45979 Neuroblastoma 805 Other (also 4962 Primates bodymap) 125 bp exon 870 bp [gt-ag] intron 2 GenBank accessions 450 RNA-seq supporting reads 79 UHR pooled cells 33 Brain 15 Blood 322 Neuroblastoma 1 Other (also 3 Primates bodymap) 139 bp exon 139 bp exon 81 bp [gt-ag] intron 45 GenBank accessions 86074 RNA-seq supporting reads 18466 UHR pooled cells 8496 Brain 5165 Blood 53330 Neuroblastoma 617 Other (also 3323 Primates bodymap) 86 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 34 accessions, some from testis (seen 5 times) brain (4), trachea (3) amygdala (2), cerebellum (2) 114 bp exon 49 bp exon 49 bp exon 445 bp [gt-ag] intron 34 GenBank accessions 4269 RNA-seq supporting reads 921 UHR pooled cells 756 Brain 55 Blood 2453 Neuroblastoma 84 Other (also 17 Primates bodymap) 51 bp exon 145 bp [gt-ag] intron 1 GenBank accession 4 RNA-seq supporting reads 1 Blood 3 Neuroblastoma 64 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 120 bp exon 991 bp [gt-ag] intron 81 GenBank accessions 58248 RNA-seq supporting reads 12473 UHR pooled cells 5984 Brain 4827 Blood 34507 Neuroblastoma 457 Other (also 1170 Primates bodymap) 59 bp exon 4633 bp [gt-ag] intron 61 GenBank accessions 40823 RNA-seq supporting reads 8230 UHR pooled cells 3929 Brain 6050 Blood 22294 Neuroblastoma 320 Other (also 2390 Primates bodymap) 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 73 bp exon 651 bp [gt-ag] intron 57 GenBank accessions 36703 RNA-seq supporting reads 7541 UHR pooled cells 3831 Brain 2591 Blood 22323 Neuroblastoma 417 Other (also 2295 Primates bodymap) 113 bp exon 1414 bp [gt-ag] intron 61 GenBank accessions 74292 RNA-seq supporting reads 15709 UHR pooled cells 7510 Brain 4289 Blood 45979 Neuroblastoma 805 Other (also 4962 Primates bodymap) 69 bp exon 1 accession from embryonic stem 69 bp exon 581 bp exon 581 bp exon 2 accessions, some from amygdala (seen once) b-cell, chronic lymphotic leukemia (once) capped 5' end, 1 accession 581 bp exon 75 bp exon 75 bp exon 869 bp [gt-ag] intron 1 GenBank accession 14 RNA-seq supporting reads 3 UHR pooled cells 4 Blood 7 Neuroblastoma 51 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 1424 bp [gt-ag] intron 120 GenBank accessions 70771 RNA-seq supporting reads 14361 UHR pooled cells 7011 Brain 7770 Blood 41178 Neuroblastoma 451 Other (also 4986 Primates bodymap) 120 bp exon 991 bp [gt-ag] intron 81 GenBank accessions 58248 RNA-seq supporting reads 12473 UHR pooled cells 5984 Brain 4827 Blood 34507 Neuroblastoma 457 Other (also 1170 Primates bodymap) 59 bp exon 4633 bp [gt-ag] intron 61 GenBank accessions 40823 RNA-seq supporting reads 8230 UHR pooled cells 3929 Brain 6050 Blood 22294 Neuroblastoma 320 Other (also 2390 Primates bodymap) 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 96 bp exon 2 accessions, some from blastocyst (seen once) pluripotent cell line derived fromblastocyst inner cell mass (once) 96 bp exon 284 bp exon 284 bp exon 81 bp [gt-ag] intron 45 GenBank accessions 86074 RNA-seq supporting reads 18466 UHR pooled cells 8496 Brain 5165 Blood 53330 Neuroblastoma 617 Other (also 3323 Primates bodymap) 86 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 119 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 60 bp exon 1 accession from spleen capped 5' end, 1 accession 60 bp exon 400 bp exon 400 bp exon 1 accession from colon normal 400 bp exon 97 bp exon 445 bp [gt-ag] intron 34 GenBank accessions 4269 RNA-seq supporting reads 921 UHR pooled cells 756 Brain 55 Blood 2453 Neuroblastoma 84 Other (also 17 Primates bodymap) 51 bp exon 51 bp exon 138 bp [gt-ag] intron 321 GenBank accessions 57643 RNA-seq supporting reads 11230 UHR pooled cells 5518 Brain 4662 Blood 35726 Neuroblastoma 507 Other (also 4933 Primates bodymap) 71 bp exon 1029 bp [gt-ag] intron 328 GenBank accessions 66014 RNA-seq supporting reads 13006 UHR pooled cells 6412 Brain 7164 Blood 38869 Neuroblastoma 563 Other (also 6516 Primates bodymap) 65 bp exon 1271 bp [gt-ag] intron 288 GenBank accessions 71936 RNA-seq supporting reads 13587 UHR pooled cells 6521 Brain 11345 Blood 39941 Neuroblastoma 542 Other (also 6590 Primates bodymap) 58 bp exon 1163 bp [gt-ag] intron 208 GenBank accessions 67843 RNA-seq supporting reads 13331 UHR pooled cells 6529 Brain 7836 Blood 39590 Neuroblastoma 557 Other (also 8119 Primates bodymap) 69 bp exon 2535 bp [gt-ag] intron 9 GenBank accessions 2487 RNA-seq supporting reads 372 UHR pooled cells 308 Brain 606 Blood 1197 Neuroblastoma 4 Other (also 27 Primates bodymap) 54 bp exon 4638 bp [gt-ag] intron 1 GenBank accession 1 RNA-seq supporting reads 1 Neuroblastoma 59 bp exon 95 bp [gt-ag] intron 59 GenBank accessions 50136 RNA-seq supporting reads 10354 UHR pooled cells 5021 Brain 4197 Blood 30130 Neuroblastoma 434 Other (also 2781 Primates bodymap) 1 accession from spleen capped 5' end, 1 accession 54 bp exon 741 bp exon 741 bp exon 207 bp uORF 741 bp exon 1647 bp [gt-ag] intron 55 GenBank accessions 65533 RNA-seq supporting reads 13317 UHR pooled cells 6276 Brain 5211 Blood 40150 Neuroblastoma 579 Other (also 3971 Primates bodymap) 97 bp exon 97 bp exon 1726 bp [gt-ag] intron 57 GenBank accessions 68269 RNA-seq supporting reads 14317 UHR pooled cells 6710 Brain 3768 Blood 42928 Neuroblastoma 546 Other (also 4136 Primates bodymap) 746 bp exon 746 bp exon 127 bp [gt-ag] intron 62 GenBank accessions 87948 RNA-seq supporting reads 18252 UHR pooled cells 8501 Brain 4652 Blood 55955 Neuroblastoma 588 Other (also 3196 Primates bodymap) 110 bp exon 110 bp exon 640 bp [gt-ag] intron 62 GenBank accessions 82501 RNA-seq supporting reads 16999 UHR pooled cells 7980 Brain 5355 Blood 51553 Neuroblastoma 614 Other (also 2835 Primates bodymap) 100 bp exon 100 bp exon 100 bp exon 78 bp [gt-ag] intron 61 GenBank accessions 76850 RNA-seq supporting reads 14550 UHR pooled cells 8079 Brain 3757 Blood 49835 Neuroblastoma 629 Other (also 3402 Primates bodymap) 121 bp exon 121 bp exon 260 bp [gt-ag] intron 64 GenBank accessions 77721 RNA-seq supporting reads 16408 UHR pooled cells 7714 Brain 4145 Blood 48928 Neuroblastoma 526 Other (also 4687 Primates bodymap) 79 bp exon 79 bp exon 593 bp [gt-ag] intron 62 GenBank accessions 83944 RNA-seq supporting reads 17958 UHR pooled cells 8581 Brain 4887 Blood 51901 Neuroblastoma 617 Other (also 4428 Primates bodymap) 145 bp exon 145 bp exon 641 bp [gt-ag] intron 66 GenBank accessions 91673 RNA-seq supporting reads 20483 UHR pooled cells 9210 Brain 3202 Blood 58207 Neuroblastoma 571 Other (also 4468 Primates bodymap) 653 bp exon 653 bp exon 3 accessions, some from uterus (seen 2 times) head normal (once) capped 5' end, 1 accession Validated 3' end, 1 accession 653 bp exon 308 bp exon 308 bp exon 899 bp [gt-ag] intron 54 GenBank accessions 70806 RNA-seq supporting reads 14539 UHR pooled cells 6872 Brain 4776 Blood 43828 Neuroblastoma 791 Other (also 4305 Primates bodymap) 306 bp exon 1999 bp [gt-ag] intron 53 GenBank accessions 67406 RNA-seq supporting reads 14139 UHR pooled cells 6682 Brain 3984 Blood 41981 Neuroblastoma 620 Other (also 3487 Primates bodymap) 50 bp exon 1 accession 50 bp exon 564 bp exon 564 bp exon 1 accession from cerebellum capped 5' end, 1 accession 564 bp exon Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron, the small numbers show the support of the introns in deep sequencing (with details in mouse-over) . Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
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Sequences: click on the numbers to get the DNA back to top


Click on the headers to reorder the lines
mRNA variant mRNA matching the genome Best predicted protein 5' UTR 3' UTR uORF Upstream sequence Transcription
unit
pre-mRNA		 Downstream sequence
aAug10 3803 bp 826 aa 117 bp 1205 bp   2kb possibly including promoter 26452 bp 1kb
bAug10 3800 bp 825 aa 117 bp 1205 bp   2kb including Promoter 26452 bp 1kb
cAug10 4092 bp 807 aa 59 bp 1609 bp   2kb including Promoter 26798 bp 1kb
dAug10 4531 bp 786 aa 240 bp 1930 bp   2kb possibly including promoter 27300 bp 1kb
eAug10 2546 bp 778 aa   207 bp   2kb 24980 bp 1kb
fAug10 2757 bp 776 aa   425 bp   2kb 25291 bp 1kb
gAug10 2734 bp 586 aa 548 bp 425 bp   2kb including Promoter 14153 bp 1kb
hAug10 3966 bp 501 aa 774 bp 1686 bp   2kb possibly including promoter 25466 bp 1kb
    460 aa 2158 bp 425 bp   2kb possibly including promoter 25466 bp 1kb
iAug10 3703 bp 454 aa 1913 bp 425 bp   2kb possibly including promoter 12967 bp 1kb
jAug10 1554 bp 342 aa   523 bp   2kb 21131 bp 1kb
kAug10 849 bp 282 aa       2kb 14110 bp 1kb
lAug10 723 bp 240 aa       2kb 12336 bp 1kb
mAug10 2792 bp 223 aa 1695 bp 425 bp 204 bp 2kb including Promoter 8504 bp 1kb
nAug10 586 bp 195 aa       2kb 6977 bp 1kb
oAug10 582 bp 158 aa 22 bp 83 bp   2kb probably including promoter 6246 bp 1kb
pAug10 578 bp 148 aa 134 bp     2kb including Promoter 11892 bp 1kb
qAug10 549 bp 142 aa 122 bp     2kb including Promoter 4276 bp 1kb
rAug10 664 bp 136 aa 255 bp     2kb possibly including promoter 3562 bp 1kb
sAug10-unspliced 581 bp 35 aa 42 bp 431 bp   2kb including Promoter 581 bp 1kb
tAug10-unspliced 564 bp 84 aa 97 bp 212 bp   2kb including Promoter 564 bp 1kb
uAug10-unspliced 400 bp 62 aa 10 bp 201 bp   2kb 400 bp 1kb
Gene neighbors and Navigator on chromosome 17p11.2 back to top
FLJ34690 R MYOCD D C I R P RICH2 C I R P G R D C I R P ELAC2 100kb 0 FLJ34690, 9 accessions 2 variants MYOCD, 66 accessions, 5 variants RICH2, 188 accessions 14 variants fysla, 1 accession fusla, 1 accession bergla, 1 accession spyvawbu, 1 accession spuvawbu, 1 accession fluwaw, 2 accessions fawsla, 2 accessions lawglor, 1 accession nervaw, 1 accession lorglor, 1 accession spovawbu, 1 accession spawvawbu, 1 accession swolor, 38 accessions 2 variants mawglor, 1 accession gusla, 2 accessions spervawbu, 2 accessions gosla, 1 accession garsla, 1 accession flarwaw, 1 accession speyvawbu, 1 accession sweelor, 1 accession sporvawbu, 1 accession geesla, 1 accession gersla, 1 accession sworlor, 1 accession goysla, 1 accession jasla, 1 accession porvaw, 1 accession norglor, 1 accession seneri, 1 accession josla, 1 accession jarsla, 1 accession jawsla, 3 accessions zeerer, 6 accessions kasla, 1 accession kysla, 4 accessions stavawbu, 1 accession kusla, 2 accessions kosla, 1 accession ruglor, 1 accession rarglor, 2 accessions keysla, 1 accession korsla, 3 accessions lasla, 1 accession lusla, 2 accessions larsla, 1 accession bloywaw, 1 accession spavawbu, 1 accession fosla, 1 accession goda, 1 accession flywaw, 2 accessions feesla, 1 accession fersla, 1 accession feysla, 2 accessions loyglor, 1 accession speevawbu, 7 accessions flowaw, 3 accessions zarrer, 4 accessions spoyvawbu, 1 accession nawglor, 1 accession flawwaw, 1 accession buloy, 1 accession barloy, 2 accessions jusla, 2 accessions jeesla, 2 accessions pawglor, 1 accession jeysla, 2 accessions joysla, 2 accessions soneri, 2 accessions fleewaw, 3 accessions karsla, 2 accessions kawsla, 1 accession rawglor, 1 accession kersla, 1 accession vyvaw, 1 accession beeloy, 2 accessions lysla, 2 accessions losla, 1 accession beyloy, 1 accession fleywaw, 3 accessions LOC100128006, 2 accessions ELAC2, 529 accessions 21 variants ZOOM IN                D:disease,C:conserved,I:interactions,R:regulation,P:publications         Read more...
Annotated mRNA diagrams back to top
Bibliography:               39 articles in PubMed back to top
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s-u, .t-u, .u-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI

To mine knowledge about the gene, please click the 'Gene Summary' or the 'Function, regulation, related genes ' tab at the top of the page. The 'Gene Summary' page includes all we learnt about the gene, functional annotations of neighboring genes, maps, links to other sites and the bibliography. The 'Function, regulation, related genes ' page includes Diseases (D), Pathways, GO annotations, conserved domains (C), interactions (I) reference into function, and pointers to all genes with the same functional annotation.
To compare alternative variants, their summarized annotations, predicted proteins, introns and exons, or to access any sequence, click the 'Alternative mRNAs features' tab. To see a specific mRNA variant diagram, sequence and annotation, click the variant name in the 'mRNA' tab. To examine expression data from all cDNAs clustered in this gene by AceView, click the 'Expression tissue'.

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