Homo sapiens gene EIF3F, encoding eukaryotic translation initiation factor 3, subunit F.
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SUMMARY back to top
RefSeq annotates one representative transcript (NM included in AceView variant.a), but Homo sapiens cDNA sequences in GenBank, dbEST, Trace and SRA, filtered against clone rearrangements, coaligned on the genome and clustered in a minimal non-redundant way by the manually supervised AceView program, support at least 8 spliced variants.

AceView synopsis, each blue text links to tables and details
Expression: According to AceView, this gene is expressed at very high level, 4.3 times the average gene in this release. The sequence of this gene is defined by 466 GenBank accessions from 446 cDNA clones, some from brain (seen 25 times), lymph (20), skeletal muscle (20), placenta (18), lung (17), pancreas (16), eye (15) and 142 other tissues. We annotate structural defects or features in 12 cDNA clones.
Alternative mRNA variants and regulation: The gene contains 13 distinct introns (11 gt-ag, 2 gc-ag). Transcription produces 9 different mRNAs, 8 alternatively spliced variants and 1 unspliced form. There are 5 probable alternative promotors and 5 validated alternative polyadenylation sites (see the diagram). The mRNAs appear to differ by truncation of the 5' end, presence or absence of 2 cassette exons, overlapping exons with different boundaries, splicing versus retention of 5 introns.
Note that mRNA .hAug10 was found in vivo, although it is a predicted target of nonsense mediated mRNA decay (NMD).
Efficacy of translation may be reduced by the presence of a shorter translated product (uORF) initiating at an AUG upstream of the main open reading frame (in variant aAug10, dAug10, eAug10).
Function: There are 21 articles specifically referring to this gene in PubMed. Proteins are expected to localize in various compartments (cytoskeleton, membrane, mitochondrion, cytoplasm). Putative protein interactors have been described (ABCE1, ASCC3, BAT2, BAT2L1ANDSNORD62AANDSNORD62B, CDK11AANDCDK11B, CSNK2A1, CSNK2A2, CSNK2BANDLY6G5B, DKC1ANDSNORA36AANDSNORA56, EEF1A1, EIF1B, EIF3AANDSNORA19, EIF3B, EIF3C, EIF3D, EIF3E, EIF3FP3, EIF3G, EIF3H, EIF3I, EIF3J, EIF3K, EIF3L, EIF3M, EIF4A2_, EIF4B, EIF4E, EIF4E.1, EIF4E2, EIF4G1, EIF4G3, GLE1, HAX1, HTR2A, IMMT, MTOR, PTN, RPS6KB1, SHBG, SMAD9, USP3, WDR48, ZBED5ANDEIF4G2ANDSNORD97).
Protein coding potential: 7 spliced and the unspliced mRNAs putatively encode good proteins, altogether 8 different isoforms (8 complete), some containing Mov34/MPN/PAD-1 family domain [Pfam], some transmembrane domains [Psort2]. The remaining mRNA variant (spliced; partial) appears not to encode a good protein.
3 isoforms are annotated using as Met a Kozak-compatible non-AUG start, thereby gaining a minimum of 78 amino acids N-terminal to the first AUG. Finally proteins from this gene may be modulated by acetylation; phosphorylation; ubiquitination, as detailed at PhosphoSite.

Please quote: AceView: a comprehensive cDNA-supported gene and transcripts annotation, Genome Biology 2006, 7(Suppl 1):S12.
Map on chromosome 11, links to other databases and other names
Map: This gene EIF3F maps on chromosome 11, at 11p15.4 according to Entrez Gene. In AceView, it covers 26.57 kb, from 7991798 to 8018368 (NCBI 37, August 2010), on the direct strand.
Links to: manual annotations from PhosphoSite, the SNP view, gene overviews from Gene 8665, GeneCards, expression data from Gene 8665, molecular and other annotations from UCSC, or our GOLD analysis.
The previous AceView annotation is here.
Other names: The gene is also known as EIF3F, EIF3S5 or eIF3-p47, LOC8665. It has been described as eukaryotic translation initiation factor 3 subunit F, eIF3-epsilon, eIF-3-epsilon, eukaryotic translation initiation factor 3, subunit 5 epsilon, 47kDa, eukaryotic translation initiation factor 3, subunit 5 (epsilon, 47kD).
Closest AceView homologs in other species ?
The closest mouse gene, according to BlastP, is the AceView gene Eif3f (e= 10-121).
The closest C.elegans gene, according to BlastP, is the AceView/WormGene eif-3.F (e=3 10-29), which may contain interesting functional annotation.
The closest A.thaliana gene, according to BlastP, is the AceView gene EIF2 (e=6 10-33), which may contain interesting functional annotation
RNA_seq discoveries back to top
Expression/conservation in primates tissues evaluated by cross-mapping to human. back to top
EIF3F Gene expression in 15 primates, 16 tissues, from the NHPRTR project in sFPKM BAB SkeletalMuscle WholeBlood CHP Kidney Liver Lung Spleen CMC CMM Cerebellum HUM Brain Colon Heart LymphNode Ovary Testis JMI BoneMarrow MLM OWL PTM RMC RMI Pituitary SQM Thymus MST SMY RTL 21.6 23.2 18.8 10.1 15.3 20.2 14.3 20.2 37.6 10.8 30.6 32.8 92.7 53.2 49.7 37.6 70.2 92.7 92.7 106 75.3 131 24.8 10.8 9.41 10.1 17.6 12.4 17.6 23.2 35.1 28.5 20.2 15.3 26.6 32.8 20.2 21.6 18.8 35.1 14.3 12.4 23.2 18.8 20.2 14.3 46.3 37.6 16.4 12.4 12.4 8.19 17.6 14.3 20.2 20.2 26.6 20.2 26.6 13.3 10.8 16.4 21.6 23.2 23.2 15.3 12.4 35.1 17.6 32.8 24.8 26.6 35.1 49.7 43.2 57.1 30.6 35.1 10.1 20.2 18.8 30.6 43.2 28.5 20.2 35.1 18.8 21.6 13.3 10.8 18.8 23.2 18.8 13.3 9.41 16.4 26.6 20.2 26.6 32.8 15.3 20.2 20.2 20.2 21.6 23.2 21.6 26.6 24.8 28.5 13.3 21.6 16.4 35.1 21.6 10.1 21.6 28.5 24.8 20.2 14.3 43.2 21.6 9.41 40.3 30.6 15.3 49.7 37.6 35.1 43.2 28.5 26.6 35.1 40.3 28.5 40.3 10.1 14.3 13.3 12.4 21.6 23.2 12.4 23.2 23.2 35.1 43.2 20.2 18.8 7.13 26.6 17.6 49.7 30.6 24.8 8.19 Expression quantiles None Weak 1 2 3 4 5 6 7 8 10 20 This gene All genes log2 distributions RNA-seq gene expression profile across 16 selected tissues from the Non-Human Primates Reference Transcriptome Resource (link to NHPRTR project).
- Primates: Apes (HUM: Human (Illumina BodyMap 2), CHP: Chimpanzee), Old World monkeys (PTM: Pig-Tailed Macaque, JMI Japanese Macaque, RMI Rhesus Macaque Indian, RMC Rhesus Macaque Chinese, CMM Cynomolgus Macaque Mauritian, CMC Cynomolgus Macaque Chinese, BAB Olive Baboon, SMY Sooty Mangabey); New World monkeys (MST common Marmoset, SQM Squirrel Monkey, OWL Owl Monkey); and Lemurs (MLM Mouse Lemur, RTL Ring-Tailed Lemur).
- The level for significantly expressed genes is color coded in 8 equal sized bins (light to dark green). Light gray is for weak not-accurately measured expression (2 to 8 reads above intergenic background); dark gray for no expression or no sequence conservation (0 read in gene). The plot to the right shows the distribution of measured expression values in all tissues for all genes (blue) and for this gene (green), in Magic index = log2(1000 sFPKM).
You may also examine the strand-specific genome coverage plots on the experimental AceView/Magic hub at UCSC, by tissue or by species. Tracks may be slow to load; please reload if some tracks come up yellow-greenish, and thanks to UCSC for the great work!.
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          Complete gene on genome diagram: back to top
Please choose between the zoomable GIF version., and the HTML5/SVG version.
This diagram shows in true scale the gene on the genome, the mRNAs and the cDNA clones.
Compact gene diagram back to top
Gene EIF3F 5' 3' encoded on plus strand of chromosome 11 from 7,991,798 to 8,018,368 1 1 348978 352958 498402 517013 a [NM] 348978 352958 498402 517013 b 3390 352958 498402 517013 c 348978 352958 498402 517013 d 498402 517013 e f-u 352958 i g 348978 3 498402 517013 h 1 2kb 0 57 bp exon 57 bp exon 27 bp uORF 11362 bp [gt-ag] intron 1 GenBank accession 27 bp uORF 114 bp exon 114 bp exon 5114 bp [gt-ag] intron 1 GenBank accession 819 bp exon 819 bp exon 819 bp exon 4064 bp [gt-ag] intron 198 GenBank accessions 348780 RNA-seq supporting reads 74118 UHR pooled cells 22231 Brain 25593 Blood 226076 Neuroblastoma 762 Other (also 22003 Primates bodymap) 71 bp exon 71 bp exon 232 bp [gt-ag] intron 192 GenBank accessions 344134 RNA-seq supporting reads 74502 UHR pooled cells 22439 Brain 34400 Blood 211820 Neuroblastoma 973 Other (also 14546 Primates bodymap) 80 bp exon 80 bp exon 723 bp [gt-ag] intron 185 GenBank accessions 352773 RNA-seq supporting reads 77293 UHR pooled cells 23935 Brain 45137 Blood 205387 Neuroblastoma 1021 Other (also 513 Primates bodymap) 138 bp exon 138 bp exon 1401 bp [gt-ag] intron 137 GenBank accessions 498265 RNA-seq supporting reads 117763 UHR pooled cells 37089 Brain 32755 Blood 309560 Neuroblastoma 1098 Other (also 93 Primates bodymap) 92 bp exon 92 bp exon 464 bp [gt-ag] intron 157 GenBank accessions 516856 RNA-seq supporting reads 112129 UHR pooled cells 35418 Brain 54860 Blood 313331 Neuroblastoma 1118 Other (also 13868 Primates bodymap) 137 bp exon 137 bp exon 135 bp [gt-ag] intron 179 GenBank accessions 525483 RNA-seq supporting reads 109155 UHR pooled cells 34741 Brain 57185 Blood 323450 Neuroblastoma 952 Other (also 45046 Primates bodymap) 114 bp exon 114 bp exon 577 bp [gt-ag] intron 202 GenBank accessions 640331 RNA-seq supporting reads 143145 UHR pooled cells 47141 Brain 55681 Blood 393446 Neuroblastoma 918 Other (also 27903 Primates bodymap) 433 bp exon 433 bp exon 230 accessions, NM_003754.2 some from brain (seen 18 times) skeletal muscle (17) liver (11), testis (10) lymph (9) Validated 3' end, 10 accessions 433 bp exon 613 bp exon 613 bp exon 150 bp [gc-ag] fuzzy intron 2 GenBank accessions 12 RNA-seq supporting reads 1 Brain 1 Blood 10 Neuroblastoma 151 bp exon 4064 bp [gt-ag] intron 198 GenBank accessions 348780 RNA-seq supporting reads 74118 UHR pooled cells 22231 Brain 25593 Blood 226076 Neuroblastoma 762 Other (also 22003 Primates bodymap) 71 bp exon 232 bp [gt-ag] intron 192 GenBank accessions 344134 RNA-seq supporting reads 74502 UHR pooled cells 22439 Brain 34400 Blood 211820 Neuroblastoma 973 Other (also 14546 Primates bodymap) 80 bp exon 723 bp [gt-ag] intron 185 GenBank accessions 352773 RNA-seq supporting reads 77293 UHR pooled cells 23935 Brain 45137 Blood 205387 Neuroblastoma 1021 Other (also 513 Primates bodymap) 138 bp exon 1401 bp [gt-ag] intron 137 GenBank accessions 498265 RNA-seq supporting reads 117763 UHR pooled cells 37089 Brain 32755 Blood 309560 Neuroblastoma 1098 Other (also 93 Primates bodymap) 92 bp exon 464 bp [gt-ag] intron 157 GenBank accessions 516856 RNA-seq supporting reads 112129 UHR pooled cells 35418 Brain 54860 Blood 313331 Neuroblastoma 1118 Other (also 13868 Primates bodymap) 137 bp exon 135 bp [gt-ag] intron 179 GenBank accessions 525483 RNA-seq supporting reads 109155 UHR pooled cells 34741 Brain 57185 Blood 323450 Neuroblastoma 952 Other (also 45046 Primates bodymap) 114 bp exon 577 bp [gt-ag] intron 202 GenBank accessions 640331 RNA-seq supporting reads 143145 UHR pooled cells 47141 Brain 55681 Blood 393446 Neuroblastoma 918 Other (also 27903 Primates bodymap) 873 bp exon 192 accessions, some from lymph (seen 11 times) eye (9), heart (9), pancreas (9) placenta (9) Validated 3' end, 50 accessions 873 bp exon 380 bp exon 380 bp exon 4367 bp [gt-ag] intron 3 GenBank accessions 3387 RNA-seq supporting reads 84 UHR pooled cells 356 Brain 70 Blood 2872 Neuroblastoma 5 Other (also 51 Primates bodymap) 80 bp exon 723 bp [gt-ag] intron 185 GenBank accessions 352773 RNA-seq supporting reads 77293 UHR pooled cells 23935 Brain 45137 Blood 205387 Neuroblastoma 1021 Other (also 513 Primates bodymap) 138 bp exon 1401 bp [gt-ag] intron 137 GenBank accessions 498265 RNA-seq supporting reads 117763 UHR pooled cells 37089 Brain 32755 Blood 309560 Neuroblastoma 1098 Other (also 93 Primates bodymap) 92 bp exon 464 bp [gt-ag] intron 157 GenBank accessions 516856 RNA-seq supporting reads 112129 UHR pooled cells 35418 Brain 54860 Blood 313331 Neuroblastoma 1118 Other (also 13868 Primates bodymap) 137 bp exon 135 bp [gt-ag] intron 179 GenBank accessions 525483 RNA-seq supporting reads 109155 UHR pooled cells 34741 Brain 57185 Blood 323450 Neuroblastoma 952 Other (also 45046 Primates bodymap) 114 bp exon 577 bp [gt-ag] intron 202 GenBank accessions 640331 RNA-seq supporting reads 143145 UHR pooled cells 47141 Brain 55681 Blood 393446 Neuroblastoma 918 Other (also 27903 Primates bodymap) 131 bp exon 3 accessions, some from cerebellum (seen 2 times) skeletal muscle (once) 131 bp exon 379 bp exon 379 bp exon 519 bp uORF 4064 bp [gt-ag] intron 198 GenBank accessions 348780 RNA-seq supporting reads 74118 UHR pooled cells 22231 Brain 25593 Blood 226076 Neuroblastoma 762 Other (also 22003 Primates bodymap) 519 bp uORF 191 bp exon 191 bp exon 112 bp [gt-ag] intron 5 GenBank accessions 3196 RNA-seq supporting reads 851 UHR pooled cells 356 Brain 264 Blood 1710 Neuroblastoma 15 Other (also 1 Primates bodymap) 80 bp exon 80 bp exon 80 bp exon 723 bp [gt-ag] intron 185 GenBank accessions 352773 RNA-seq supporting reads 77293 UHR pooled cells 23935 Brain 45137 Blood 205387 Neuroblastoma 1021 Other (also 513 Primates bodymap) 138 bp exon 138 bp exon 1401 bp [gt-ag] intron 137 GenBank accessions 498265 RNA-seq supporting reads 117763 UHR pooled cells 37089 Brain 32755 Blood 309560 Neuroblastoma 1098 Other (also 93 Primates bodymap) 92 bp exon 92 bp exon 464 bp [gt-ag] intron 157 GenBank accessions 516856 RNA-seq supporting reads 112129 UHR pooled cells 35418 Brain 54860 Blood 313331 Neuroblastoma 1118 Other (also 13868 Primates bodymap) 137 bp exon 137 bp exon 135 bp [gt-ag] intron 179 GenBank accessions 525483 RNA-seq supporting reads 109155 UHR pooled cells 34741 Brain 57185 Blood 323450 Neuroblastoma 952 Other (also 45046 Primates bodymap) 114 bp exon 114 bp exon 577 bp [gt-ag] intron 202 GenBank accessions 640331 RNA-seq supporting reads 143145 UHR pooled cells 47141 Brain 55681 Blood 393446 Neuroblastoma 918 Other (also 27903 Primates bodymap) 225 bp exon 225 bp exon 10 accessions, some from eye (seen 2 times) choriocarcinoma (once) lens (once), lung (once) occipital scalp hair (once) capped 5' end, 4 accessions Validated 3' end, 2 accessions 225 bp exon 431 bp exon 431 bp exon 87 bp uORF 431 bp exon 431 bp exon 1401 bp [gt-ag] intron 137 GenBank accessions 498265 RNA-seq supporting reads 117763 UHR pooled cells 37089 Brain 32755 Blood 309560 Neuroblastoma 1098 Other (also 93 Primates bodymap) 92 bp exon 92 bp exon 464 bp [gt-ag] intron 157 GenBank accessions 516856 RNA-seq supporting reads 112129 UHR pooled cells 35418 Brain 54860 Blood 313331 Neuroblastoma 1118 Other (also 13868 Primates bodymap) 137 bp exon 137 bp exon 135 bp [gt-ag] intron 179 GenBank accessions 525483 RNA-seq supporting reads 109155 UHR pooled cells 34741 Brain 57185 Blood 323450 Neuroblastoma 952 Other (also 45046 Primates bodymap) 114 bp exon 114 bp exon 577 bp [gt-ag] intron 202 GenBank accessions 640331 RNA-seq supporting reads 143145 UHR pooled cells 47141 Brain 55681 Blood 393446 Neuroblastoma 918 Other (also 27903 Primates bodymap) 225 bp exon 225 bp exon 1 accession from brain from total brain 225 bp exon 583 bp exon 583 bp exon 1 accession from breast cancer from mammary gland (cancer tissue) 583 bp exon 328 bp exon 328 bp exon 723 bp [gt-ag] intron 185 GenBank accessions 352773 RNA-seq supporting reads 77293 UHR pooled cells 23935 Brain 45137 Blood 205387 Neuroblastoma 1021 Other (also 513 Primates bodymap) 6 accessions, some from head neck (seen 6 times) 112 bp exon 425 bp exon 425 bp exon 36 bp uORF 425 bp exon 425 bp exon 135 bp [gt-ag] intron 179 GenBank accessions 525483 RNA-seq supporting reads 109155 UHR pooled cells 34741 Brain 57185 Blood 323450 Neuroblastoma 952 Other (also 45046 Primates bodymap) 114 bp exon 114 bp exon 577 bp [gt-ag] intron 202 GenBank accessions 640331 RNA-seq supporting reads 143145 UHR pooled cells 47141 Brain 55681 Blood 393446 Neuroblastoma 918 Other (also 27903 Primates bodymap) 225 bp exon 225 bp exon 2 accessions, some from eyeball (seen once) human lung epithelial cells (once) lung (once) Validated 3' end, 1 accession 225 bp exon 382 bp exon 382 bp exon 4064 bp [gt-ag] intron 198 GenBank accessions 348780 RNA-seq supporting reads 74118 UHR pooled cells 22231 Brain 25593 Blood 226076 Neuroblastoma 762 Other (also 22003 Primates bodymap) 71 bp exon 232 bp [gt-ag] intron 192 GenBank accessions 344134 RNA-seq supporting reads 74502 UHR pooled cells 22439 Brain 34400 Blood 211820 Neuroblastoma 973 Other (also 14546 Primates bodymap) 342 bp exon 342 bp exon 68 bp [gc-ag] intron 2 GenBank accessions 1 RNA-seq supporting reads 1 Blood 531 bp exon 1401 bp [gt-ag] intron 137 GenBank accessions 498265 RNA-seq supporting reads 117763 UHR pooled cells 37089 Brain 32755 Blood 309560 Neuroblastoma 1098 Other (also 93 Primates bodymap) 92 bp exon 464 bp [gt-ag] intron 157 GenBank accessions 516856 RNA-seq supporting reads 112129 UHR pooled cells 35418 Brain 54860 Blood 313331 Neuroblastoma 1118 Other (also 13868 Primates bodymap) 10 accessions, some from whole brain (seen 3 times) carcinoid (2), lung (2) ovary, tumor tissue (2) chondrosarcoma (once) capped 5' end, 2 accessions Validated 3' end, 5 accessions 1188 bp exon Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron, the small numbers show the support of the introns in deep sequencing (with details in mouse-over) . Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
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Sequences: click on the numbers to get the DNA back to top


Click on the headers to reorder the lines
mRNA variant mRNA matching the genome Best predicted protein 5' UTR 3' UTR uORF Upstream sequence Transcription
unit
pre-mRNA		 Downstream sequence
aAug10 2055 bp 473 aa 278 bp 355 bp 24 bp 2kb possibly including promoter 26127 bp 1kb
bAug10 2269 bp 423 aa 202 bp 795 bp   2kb possibly including promoter 10015 bp 1kb
cAug10 1072 bp 285 aa 161 bp 53 bp   2kb probably including promoter 8739 bp 1kb
dAug10 1356 bp 208 aa 582 bp 147 bp 516 bp 2kb including Promoter 8832 bp 1kb
eAug10 999 bp 147 aa 408 bp 147 bp 84 bp 2kb possibly including promoter 3576 bp 1kb
fAug10-unspliced 583 bp 145 aa 16 bp 129 bp   2kb probably including promoter 583 bp 1kb
gAug10 764 bp 105 aa 299 bp 147 bp 33 bp 2kb possibly including promoter 1476 bp 1kb
hAug10 2606 bp 172 aa 18 bp 2069 bp   2kb including Promoter 8835 bp 1kb
iAug10 440 bp 60 aa 260 bp     2kb 1163 bp 1kb
Gene neighbors and Navigator on chromosome 11p15.4 back to top
PPFIBP2 C I R P OR10AB1P C P OR5E1P P R EIF3F C I R P R TUB D C I R P R C R C D C I R P CYB5R2 D C R P OVCH2 G R C OR5P1P C P OR5P2 C P OR5P3 C P OR10A6 C P OR10A3 C R P NLRP10 C R C R P RIC3 D C I R P LMO1 100kb 0 OLFML1, 133 accessions 6 variants PPFIBP2, 385 accessions 29 variants OR10AB1P, 3 accessions 2 variants OR5E1P, 3 accessions waglaw, 3 accessions, 2 variants EIF3F, 462 accessions 9 variants tuti, 10 accessions TUB, 115 accessions, 11 variants tiriri, 3 accessions, 2 variants cherkerby, 1 accession shoykarby, 3 accessions smeygyby, 81 accessions sukerby, 1 accession flygley, 1 accession snawsleeby, 1 accession seekerby, 2 accessions serkerby, 2 accessions smeyfleebu, 1 accession soykerby, 1 accession wymee, 4 accessions spawsleeby, 1 accession spersleeby, 1 accession tukerby, 1 accession stomee, 5 accessions swarsleeby, 1 accession teekerby, 3 accessions smorfleebu, 1 accession terkerby, 1 accession teykerby, 1 accession torkerby, 1 accession smoyfleebu, 1 accession vukerby, 1 accession varkerby, 1 accession vawkerby, 3 accessions ploygley, 1 accession yatemi, 2 accessions skygley, 1 accession yotemi, 3 accessions, 2 variants veekerby, 3 accessions skugley, 4 accessions timaro, 5 accessions starmee, 12 accessions 2 variants skogley, 1 accession snerfleebu, 1 accession sneyfleebu, 1 accession werkerby, 1 accession matemi, 2 accessions zakerby, 2 accessions spargley, 1 accession zeykerby, 1 accession swoygley, 4 accessions plawgyby, 30 accessions blocher, 1 accession sporfleebu, 1 accession chakerby, 2 accessions morslerby, 1 accession mutemi, 4 accessions chawkerby, 1 accession sawslerby, 1 accession smeegyby, 1 accession chorkerby, 1 accession smorgyby, 5 accessions storfleebu, 1 accession beyglor, 2 accessions sheekerby, 1 accession sakerby, 1 accession sykerby, 2 accessions sokerby, 1 accession sarkerby, 7 accessions shawcher, 2 accessions sneesleeby, 1 accession sawkerby, 2 accessions seykerby, 1 accession sorkerby, 1 accession takerby, 3 accessions spasleeby, 5 accessions fleygley, 1 accession tykerby, 1 accession glogley, 1 accession tokerby, 1 accession tarkerby, 1 accession shawgyby, 2 accessions kleegley, 1 accession toykerby, 2 accessions vakerby, 1 accession barslerby, 1 accession klergley, 1 accession vokerby, 1 accession duslerby, 4 accessions yutemi, 1 accession vorkerby, 1 accession snarfleebu, 1 accession snawfleebu, 1 accession sneefleebu, 1 accession wykerby, 1 accession wukerby, 3 accessions skergley, 1 accession darslerby, 1 accession slugley, 1 accession wokerby, 1 accession shorcher, 1 accession warkerby, 1 accession snorfleebu, 1 accession wawkerby, 1 accession snoyfleebu, 2 accessions snagley, 1 accession spyfleebu, 1 accession blacher, 9 accessions spufleebu, 1 accession plargyby, 2 accessions workerby, 1 accession woykerby, 2 accessions zykerby, 1 accession zukerby, 2 accessions spofleebu, 1 accession sparfleebu, 1 accession feeslerby, 1 accession spawfleebu, 1 accession speefleebu, 1 accession mitemi, 1 accession zarkerby, 1 accession sperfleebu, 2 accessions forslerby, 1 accession zawkerby, 4 accessions sweygley, 1 accession swymee, 9 accessions bawglor, 1 accession zorkerby, 1 accession zoykerby, 1 accession blarcher, 1 accession pyslerby, 1 accession rawny, 2 accessions slorgyby, 2 accessions tumaro, 1 accession poyslerby, 1 accession chukerby, 1 accession royslerby, 1 accession chokerby, 2 accessions cheekerby, 1 accession cheykerby, 2 accessions choykerby, 1 accession shakerby, 1 accession stoyfleebu, 1 accession shykerby, 3 accessions shukerby, 1 accession swafleebu, 4 accessions temaro, 1 accession shokerby, 1 accession metemi, 1 accession motemi, 1 accession sharkerby, 2 accessions tomaro, 1 accession swyfleebu, 1 accession tuslerby, 1 accession toyslerby, 1 accession bleycher, 2 accessions shawkerby, 2 accessions veemee, 35 accessions 12 variants CYB5R2, 160 accessions 14 variants OVCH2, 7 accessions, 5 variants LOC283299, 14 accessions 7 variants OR5P1P, 1 accession OR5P2, 11 accessions OR5P3, 2 accessions OR10A6, 2 accessions OR10A3, 15 accessions NLRP10, 20 accessions 2 variants blycher, 1 accession stoymee, 5 accessions 3 variants RIC3, 202 accessions, 18 variants LMO1, 49 accessions, 7 variants STK33, 145 accessions 16 variants ZOOM IN                D:disease,C:conserved,I:interactions,R:regulation,P:publications         Read more...
Annotated mRNA diagrams back to top
Bibliography:               21 articles in PubMed back to top
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI

To mine knowledge about the gene, please click the 'Gene Summary' or the 'Function, regulation, related genes ' tab at the top of the page. The 'Gene Summary' page includes all we learnt about the gene, functional annotations of neighboring genes, maps, links to other sites and the bibliography. The 'Function, regulation, related genes ' page includes Diseases (D), Pathways, GO annotations, conserved domains (C), interactions (I) reference into function, and pointers to all genes with the same functional annotation.
To compare alternative variants, their summarized annotations, predicted proteins, introns and exons, or to access any sequence, click the 'Alternative mRNAs features' tab. To see a specific mRNA variant diagram, sequence and annotation, click the variant name in the 'mRNA' tab. To examine expression data from all cDNAs clustered in this gene by AceView, click the 'Expression tissue'.

If you know more about this gene, or found errors, please share your knowledge. Thank you !