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Gene ZNF7TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
235 supporting clones for gene ZNF7 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA346649 heart .a 328 to 477 1 to 150       150/150
(100 %)
0 diff
(100 %id)
AB209619 Spleen .f -8 to 5632 1 to 5639 exact tiling clone,   5639/5639
(100 %)
28 diff
(99.6 %id)
AF027146 brain .a 982 to 1218 1 to 237       237/237
(100 %)
6 diff
(97.5 %id)
AI908547 breast .f 2547 to 2827 283 to 3       281/288
(97 %)
0 diff
(100 %id)
AI908548 breast .f 2547 to 2827 283 to 3       281/285
(98 %)
0 diff
(100 %id)
AJ573868 pectoral muscle (after mastectomy) .c 2200 to 2351 1 to 153       153/155
(98 %)
9 diff
(94.2 %id)
AK022466 mammary gland .c 2216 to 3843 1 to 1621   tiling clone, available from FLJ,   1621/1622
(99 %)
11 diff
(99.4 %id)
AK096025 Kidney .m 1 to 1874 1 to 1873 exact tiling clone, available from FLJ,   1873/1873
(100 %)
7 diff
(99.7 %id)
AK300001   .b 25 to 2242 1 to 2218   tiling clone,   2218/2218
(100 %)
1 diff
(100.0 %id)
AK301561 breast, tumor tissue .d 19 to 2102 1 to 2084   tiling clone,   2084/2084
(100 %)
6 diff
(99.8 %id)
AK308002   .b 1 to 1273 1 to 1274   tiling clone,   1274/1274
(100 %)
5 diff
(99.7 %id)
AK313745   .a 119 to 2256 1 to 2138       2138/2138
(100 %)
3 diff
(99.9 %id)
CB155236 brain .a 509 to 1067 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
BC058923 Bladder, transitional cell papilloma .a 115 to 2308 1 to 2194   tiling clone, available from MGC, AAA   2194/2194
(100 %)
1 diff
(100.0 %id)
BE706357 head_neck .c 1963 to 2337 18 to 392       375/404
(92 %)
3 diff
(99.3 %id)
BF773288 epid_tumor .e-u 1 to 416 15 to 428   tiling clone,   414/428
(96 %)
6 diff
(98.6 %id)
BF884359 lung_tumor .f 48 to 486 440 to 3   tiling clone, Submitted on the opposite strand 438/451
(97 %)
0 diff
(100 %id)
BG954695 colon .a 1453 to 1769 1 to 318       318/318
(100 %)
4 diff
(98.8 %id)
BG955185 colon .a 1403 to 1730 330 to 2       329/330
(99 %)
0 diff
(100 %id)
BG955186 colon .a 1473 to 1767 312 to 18       295/312
(94 %)
0 diff
(100 %id)
BG955641 colon .a 1342 to 1776 453 to 19       435/453
(96 %)
0 diff
(100 %id)
BG955642 colon .a 1373 to 1721 359 to 1       359/359
(100 %)
17 diff
(95.3 %id)
DA040284 bladder .o 3 to 559 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DC301709   .d 22 to 587 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC301751   .a 1 to 574 1 to 574   tiling clone,   574/574
(100 %)
4 diff
(99.4 %id)
DA051305   .a 102 to 654 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA070773 cerebellum .a 121 to 662 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DC305241 cerebellum .d 41 to 576 1 to 536       536/536
(100 %)
1 diff
(99.9 %id)
DA112195 cerebellum .r-u 1 to 582 2 to 584 exact tiling clone, capped   583/583
(100 %)
2 diff
(99.7 %id)
DA256606 caudate nucleus .vb 22 to 582 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
DA290467 hippocampus .vb 21 to 605 2 to 586 exact tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
DA329428 hippocampus .o 22 to 313 2 to 293   capped   292/292
(100 %)
0 diff
(100 %id)
DA338133 hippocampus .p 1 to 580 2 to 581 exact tiling clone, capped   580/580
(100 %)
2 diff
(99.7 %id)
DA364901 subthalamic nucleus .o 22 to 575 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA374300 thalamus .o 22 to 590 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DC340478 thalamus .vb 2 to 559 1 to 558       558/558
(100 %)
0 diff
(100 %id)
BX116096   .m 1361 to 1867 1 to 508   tiling clone, AAA   508/508
(100 %)
5 diff
(99.1 %id)
BX280317 lymph, lymphoma, cell line .a 297 to 789 1 to 493       493/493
(100 %)
0 diff
(100 %id)
BX647998 human endometrium .a 100 to 2308 1 to 2209   available from DKFZ, AAA   2209/2209
(100 %)
6 diff
(99.8 %id)
CB267895 adipose .o 21 to 604 1 to 588       588/591
(99 %)
11 diff
(98.2 %id)
CB269857 adipose .o 20 to 598 1 to 585       585/585
(100 %)
9 diff
(98.5 %id)
CD617090   .h 34 to 705 9 to 680 E128G K164R D165T A166H Q168R ... tiling clone,   672/680
(98 %)
15 diff
(97.8 %id)
CD617091   .a 199 to 965 769 to 5       768/769
(99 %)
9 diff
(98.9 %id)
CD705212 normal nasopharynx .e-u 133 to 665 30 to 562   tiling clone,   533/562
(94 %)
6 diff
(99.0 %id)
DA422465 cervix .o 22 to 559 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
AU279993   .a 126 to 698 1 to 573       573/573
(100 %)
0 diff
(100 %id)
CN341052 embryonic stem cells, cell lines H1, H7, andH9 .o 47 to 651 1 to 604       604/604
(100 %)
6 diff
(99.1 %id)
CN351542 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 141 to 781 1 to 642       642/642
(100 %)
1 diff
(99.9 %id)
CN351543 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 2046 to 2600 33 to 587   tiling clone,   555/587
(94 %)
6 diff
(99.0 %id)
DA427777 colon .vb 24 to 589 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
CR625704 Placenta Cot 25-normalized .l 1 to 1133 2 to 1134 exact tiling clone,   1134/1134
(100 %)
0 diff
(100 %id)
AL534039 brain, fetal brain .a 1462 to 2260 812 to 13       800/812
(98 %)
0 diff
(100 %id)
AL534040 brain, fetal brain .a 325 to 1084 1 to 760       760/760
(100 %)
0 diff
(100 %id)
BX420450 brain, fetal brain .a 150 to 985 1 to 833       833/944
(88 %)
10 diff
(99.0 %id)
BX335590 Placenta Cot 25-normalized .l 562 to 1133 574 to 1   fully sequenced,   574/574
(100 %)
6 diff
(99.0 %id)
BX335591 Placenta Cot 25-normalized .l 1 to 592 2 to 581 exact fully sequenced,   581/581
(100 %)
0 diff
(100 %id)
CA394640 eye, RPE/choroid .a 113 to 801 1 to 689       689/689
(100 %)
0 diff
(100 %id)
DC345768 tongue, tumor tissue .vd 1 to 546 1 to 546   tiling clone,   546/546
(100 %)
1 diff
(99.9 %id)
DA453177 tongue, tumor tissue .a 102 to 659 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
DA453459 tongue, tumor tissue .o 22 to 588 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA464266   .a 121 to 591 2 to 472   capped   471/471
(100 %)
0 diff
(100 %id)
DA466356   .a 203 to 755 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA467403 cord Blood .u 1 to 539 2 to 540 exact tiling clone, capped   539/539
(100 %)
0 diff
(100 %id)
D82620   .a 1907 to 2107 1 to 203       203/204
(99 %)
3 diff
(98.6 %id)
D82714   .c 1873 to 2232 1 to 363       363/363
(100 %)
5 diff
(98.7 %id)
BX642377   .a 100 to 740 1 to 641       641/641
(100 %)
2 diff
(99.7 %id)
BX642378   .a 1683 to 2293 611 to 1       611/611
(100 %)
2 diff
(99.7 %id)
AL603037 human skeletal muscle .vb 29 to 542 1 to 513       513/513
(100 %)
1 diff
(99.9 %id)
EC440381 Prostate .c 2138 to 2235 1 to 98       98/98
(100 %)
0 diff
(100 %id)
EC520386 Prostate .c 2142 to 2235 9 to 101       93/101
(92 %)
6 diff
(94.1 %id)
DA481495   .o 20 to 540 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DA482372   .o 21 to 601 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA482721   .vd 25 to 592 2 to 569 G92R tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
ES310260 scalp interfollicular dermis, skin .o 51 to 611 13 to 575       563/575
(97 %)
5 diff
(99.2 %id)
DA483332 brain .a 120 to 811 2 to 694   capped   693/702
(98 %)
7 diff
(99.1 %id)
DC349598 brain .b 20 to 463 1 to 445       445/452
(98 %)
4 diff
(99.2 %id)
DA491901 brain .vb 20 to 588 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
DA507978 brain .a 100 to 679 2 to 581   capped   580/580
(100 %)
3 diff
(99.5 %id)
DA514063 brain .vb 22 to 481 2 to 462   capped   461/461
(100 %)
1 diff
(99.8 %id)
DA521466 brain .o 24 to 575 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA538365 Kidney .j 1 to 591 2 to 593 D19X V20C A21G V22C H23A ... tiling clone, capped   592/592
(100 %)
1 diff
(99.9 %id)
FN050621 breast carcinoma .a 2021 to 2128 108 to 1     Submitted on the opposite strand 108/112
(96 %)
0 diff
(100 %id)
FN051171 breast carcinoma .a 1475 to 1560 84 to 1     Submitted on the opposite strand 84/85
(98 %)
2 diff
(97.7 %id)
FN060574 breast carcinoma .a 1470 to 1564 1 to 91       91/91
(100 %)
5 diff
(94.6 %id)
FN060883 breast carcinoma .c 2274 to 2350 78 to 1     Submitted on the opposite strand 78/78
(100 %)
2 diff
(97.5 %id)
FN064004 breast carcinoma .c 2158 to 2249 1 to 92       92/95
(96 %)
1 diff
(99.0 %id)
FN066105 breast carcinoma .a 886 to 981 1 to 94       94/94
(100 %)
1 diff
(99.0 %id)
FN069493 breast carcinoma .a 2035 to 2118 1 to 83       83/83
(100 %)
4 diff
(95.2 %id)
FN075993 breast carcinoma .a 1959 to 2029 1 to 70       70/71
(98 %)
2 diff
(97.2 %id)
FN079899 breast carcinoma .a 1685 to 1765 1 to 81       81/81
(100 %)
0 diff
(100 %id)
FN109533 breast carcinoma .a 956 to 1053 1 to 96       96/96
(100 %)
2 diff
(98.0 %id)
FN114791 breast carcinoma .m 336 to 399 8 to 71       64/71
(90 %)
0 diff
(100 %id)
FN169371 breast carcinoma .a 651 to 733 1 to 84       84/85
(98 %)
6 diff
(93.0 %id)
DB442971 testis .a 86 to 494 1 to 409       409/409
(100 %)
0 diff
(100 %id)
DB485970 hypothalamus .a 100 to 502 1 to 405       405/405
(100 %)
5 diff
(98.8 %id)
DB554904 hypothalamus .c 1917 to 2352 1 to 436     Submitted on the opposite strand 436/437
(99 %)
2 diff
(99.6 %id)
DB493601 hypothalamus .a 100 to 612 1 to 513       513/513
(100 %)
4 diff
(99.3 %id)
DB564672 hypothalamus .c 1898 to 2352 1 to 455     Submitted on the opposite strand 455/456
(99 %)
2 diff
(99.6 %id)
T27378   .a 1831 to 2027 1 to 199       199/199
(100 %)
3 diff
(98.5 %id)
DA543467   .o 2 to 550 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA546519   .o 22 to 566 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA550989   .vd 27 to 543 2 to 518   tiling clone, capped   517/517
(100 %)
0 diff
(100 %id)
DA556461   .o 21 to 596 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DC356758 heart .a 62 to 638 1 to 577       577/577
(100 %)
0 diff
(100 %id)
DC357663   .b 1 to 550 1 to 551       551/551
(100 %)
3 diff
(99.5 %id)
DC357666   .b 1 to 532 1 to 532       532/533
(99 %)
3 diff
(99.5 %id)
DC357767   .k 1 to 546 1 to 546 exact tiling clone,   546/546
(100 %)
0 diff
(100 %id)
BP249419 Kidney .vc 19 to 599 1 to 581 L9P tiling clone,   581/583
(99 %)
3 diff
(99.5 %id)
DC359596   .d 1 to 495 1 to 495   tiling clone,   495/495
(100 %)
0 diff
(100 %id)
H05264 whole brain .c 1850 to 2350 506 to 15   AAA   492/496
(99 %)
10 diff
(98.0 %id)
H59857 liver and spleen .m 715 to 1120 441 to 21       421/441
(95 %)
0 diff
(100 %id)
N64572 cochlea, ear .c 2051 to 2347 304 to 8       297/310
(95 %)
0 diff
(100 %id)
AA005168 liver and spleen .c 1895 to 2352 453 to 1   fully sequenced,   453/453
(100 %)
2 diff
(99.6 %id)
AA005274 liver and spleen .c 1459 to 1925 1 to 468   fully sequenced,   468/468
(100 %)
1 diff
(99.8 %id)
AA436716   .m 1443 to 1869 425 to 2       424/425
(99 %)
0 diff
(100 %id)
AA659725 normal prostate, Prostate .c 1996 to 2350 388 to 34   AAA   355/355
(100 %)
0 diff
(100 %id)
AA761753 germinal center B cell .c 1876 to 2345 497 to 28   AAA   470/470
(100 %)
3 diff
(99.4 %id)
AA947632 Kidney, kidney tumor .c 1855 to 2349 494 to 1       494/494
(100 %)
9 diff
(98.2 %id)
AI039924   .c 1921 to 2351 437 to 7       431/437
(98 %)
0 diff
(100 %id)
AI202730 anaplastic oligodendroglioma, brain .c 1832 to 2350 519 to 1       519/519
(100 %)
2 diff
(99.7 %id)
AI862153   .m 1476 to 1872 412 to 17   AAA   396/396
(100 %)
5 diff
(98.8 %id)
AI421908 brain, glioblastoma (pooled) .c 1779 to 2350 571 to 1       571/571
(100 %)
2 diff
(99.7 %id)
AI380734 B-cell, chronic lymphotic leukemia .a 325 to 706 455 to 77   AAA   379/426
(88 %)
12 diff
(97.2 %id)
AI828681 ovary, tumor, 5 pooled (see description) .c 1940 to 2350 412 to 1       412/412
(100 %)
1 diff
(99.8 %id)
AI915242 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 1956 to 2351 395 to 1       395/395
(100 %)
5 diff
(98.8 %id)
AI628903 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 1872 to 2347 477 to 2       476/477
(99 %)
0 diff
(100 %id)
AI942488 anaplastic oligodendroglioma, brain .m 111 to 778 670 to 2   tiling clone,   669/670
(99 %)
15 diff
(97.8 %id)
AW119031 pooled .c 2704 to 2816 124 to 15   tiling clone, AAA   110/140
(78 %)
1 diff
(99.3 %id)
AW771764 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 923 to 1299 481 to 107       375/481
(77 %)
0 diff
(100 %id)
BG054832 brain, glioblastoma (pooled) .c 1714 to 2350 638 to 1       638/638
(100 %)
2 diff
(99.7 %id)
BF197152 brain, glioblastoma (pooled) .c 1836 to 2350 515 to 1       515/515
(100 %)
0 diff
(100 %id)
BE379399 endometrium, adenocarcinoma cell line, uterus .q 1 to 850 39 to 890 exact tiling clone,   856/981
(87 %)
27 diff
(97.3 %id)
BE894430.
matches multiple genes
melanotic melanoma, skin, Skin, melanotic melanoma. .a 150 to 568 12 to 427   available from MGC, also hits gene GRWD1 416/427
(97 %)
8 diff
(98.2 %id)
BE897660 melanotic melanoma, skin .c 1489 to 2280 1 to 788       788/962
(81 %)
28 diff
(97.1 %id)
BF530758 anaplastic oligodendroglioma with 1p/19qloss, brain .a 150 to 834 8 to 685       678/920
(73 %)
18 diff
(98.1 %id)
BG111283 Bone, osteosarcoma, cell line .a 1127 to 1814 1 to 698       698/748
(93 %)
32 diff
(95.8 %id)
BG292539 bladder, transitional cell papilloma, cell line .o 51 to 525 28 to 511       484/1016
(47 %)
32 diff
(96.9 %id)
BG259605 embryonal carcinoma, cell line, testis .a 1303 to 2125 1 to 828       828/911
(90 %)
27 diff
(97.1 %id)
BG291385 bladder, transitional cell papilloma, cell line .a 115 to 754 1 to 637       637/936
(68 %)
6 diff
(99.4 %id)
BG705877 brain, hypothalamus .s 1 to 833 1 to 835   tiling clone,   835/837
(99 %)
17 diff
(98.0 %id)
BG722816 testis .o 6 to 565 1 to 573       573/711
(80 %)
30 diff
(95.8 %id)
BG724088 testis .va 1 to 587 1 to 598 A2G A12G A13G S14D V16A ... tiling clone,   598/691
(86 %)
20 diff
(97.2 %id)
BI768285 pooled lung and spleen .c 1881 to 2350 1 to 470   AAA   470/470
(100 %)
1 diff
(99.8 %id)
BI667462 brain, hypothalamus .a 95 to 908 1 to 811       811/820
(98 %)
23 diff
(97.2 %id)
BM469977 lymph, lymphoma, cell line .a 298 to 1252 1 to 962       962/1018
(94 %)
20 diff
(98.1 %id)
CK905330 insulinoma, Pancreas .e-u 1579 to 2105 542 to 16   tiling clone, AAA   527/527
(100 %)
2 diff
(99.7 %id)
CK905331 insulinoma, Pancreas .e-u 68 to 631 8 to 571   tiling clone,   564/571
(98 %)
6 diff
(99.0 %id)
BI963183 Islets of Langerhans, Pancreas .c 1816 to 2351 542 to 7       536/542
(98 %)
0 diff
(100 %id)
BI964834 Islets of Langerhans, Pancreas .c 1104 to 1707 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
BQ020963 lung, Metastatic Chondrosarcoma .c 1844 to 2350 522 to 16   AAA   507/515
(98 %)
0 diff
(100 %id)
BQ053335 blood, natural killer cells, cell line .d 76 to 968 1 to 906   tiling clone,   906/1098
(82 %)
23 diff
(98.0 %id)
BU180698 epithelioid carcinoma, Pancreas .a 908 to 1794 1 to 894       894/897
(99 %)
12 diff
(98.7 %id)
BU567973 testis .a 818 to 1359 1 to 555       555/931
(59 %)
32 diff
(96.6 %id)
CV799558 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 133 to 808 1 to 672       672/821
(81 %)
8 diff
(99.1 %id)
CF552654 Pooled muscle (cardiac and skeletal) .b 47 to 888 1 to 846       846/847
(99 %)
10 diff
(98.9 %id)
DA614060   .o 22 to 600 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
TI_57180505   .c 1881 to 2350 37 to 506   AAA   470/506
(92 %)
6 diff
(98.9 %id)
TI_44343420   .a 95 to 908 124 to 934       811/943
(86 %)
23 diff
(97.6 %id)
DA623334 Kidney .m 2 to 547 2 to 547 exact capped   546/546
(100 %)
1 diff
(99.9 %id)
DB320503 Kidney .m 1397 to 1874 477 to 1   tiling clone,   477/480
(99 %)
3 diff
(99.4 %id)
DA637060 Liver .vb 22 to 556 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
M29580   .c 1 to 2350 1 to 2351 exact tiling clone,   2351/2351
(100 %)
5 diff
(99.8 %id)
AU122660 mammary gland .c 2217 to 2902 2 to 685   capped   684/684
(100 %)
5 diff
(99.3 %id)
AU148189 mammary gland .c 3393 to 3843 452 to 2   tiling clone,   451/501
(90 %)
0 diff
(100 %id)
DA651067   .o 26 to 602 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA655181   .o 22 to 595 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA658567   .o 20 to 581 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
NM_003416.2   .a 59 to 2308 1 to 2250   RefSeq, AAA   2250/2250
(100 %)
0 diff
(100 %id)
DA697467   .t 1 to 514 2 to 516 exact tiling clone, capped   515/515
(100 %)
2 diff
(99.7 %id)
DA704079   .vb 20 to 508 2 to 490   capped   489/489
(100 %)
2 diff
(99.6 %id)
DA711623   .a 102 to 674 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
AU128663   .a 125 to 780 2 to 663   capped   662/662
(100 %)
18 diff
(97.3 %id)
AU150915   .a 1754 to 2308 549 to 1   tiling clone,   549/555
(98 %)
15 diff
(97.3 %id)
DC424487   .b 19 to 875 1 to 855       855/858
(99 %)
14 diff
(98.4 %id)
DC427286   .b 1674 to 2242 565 to 1       565/567
(99 %)
17 diff
(97.1 %id)
DA775551 brain .a 121 to 701 8 to 588   capped   581/587
(98 %)
6 diff
(99.0 %id)
DA791326 brain .a 125 to 701 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
CV571751 cornea, eye .a 1565 to 2108 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
DA815168   .vc 1 to 294 2 to 295   tiling clone, capped   294/294
(100 %)
1 diff
(99.7 %id)
DC378445   .b 25 to 581 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC378910 pericardium .n 1 to 516 1 to 516 T121A tiling clone,   516/516
(100 %)
2 diff
(99.7 %id)
DA824602 pericardium .a 120 to 670 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA847564 placenta .a 102 to 662 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BP330728 rectum .c 2132 to 2718 1 to 587       587/587
(100 %)
4 diff
(99.4 %id)
CR984708 T-Lymphocytes .g 1 to 802 1 to 802 exact tiling clone,   802/802
(100 %)
0 diff
(100 %id)
CR983635 T-Lymphocytes .b 16 to 874 1 to 859       859/859
(100 %)
0 diff
(100 %id)
CR977022 T-Lymphocytes .a 1195 to 2088 1 to 895       895/895
(100 %)
1 diff
(99.9 %id)
CT004931 T-Lymphocytes .o 1 to 849 5 to 854 E82R E83R P84A W85M V86G ... tiling clone,   854/857
(99 %)
4 diff
(99.6 %id)
BM738861 stomach .c 1792 to 2348 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
BM825797 Ascites, stomach .d 72 to 417 1 to 347       347/347
(100 %)
1 diff
(99.8 %id)
BM857392 stomach .a 916 to 1279 1 to 364       364/364
(100 %)
0 diff
(100 %id)
F29015 pectoral muscle (after mastectomy) .c 1983 to 2246 1 to 264       264/264
(100 %)
5 diff
(98.2 %id)
F37198 pectoral muscle (after mastectomy) .c 2025 to 2302 1 to 277       277/277
(100 %)
3 diff
(99.0 %id)
DA904033   .a 120 to 700 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA916993 small intestine .a 102 to 657 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA918639 small intestine .a 102 to 674 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA926250 small intestine .h 1 to 580 2 to 581   tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
DA926371 small intestine .h 1 to 570 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DC388675 small intestine .vb 2 to 481 1 to 480       480/480
(100 %)
0 diff
(100 %id)
DA930641 small intestine .o 22 to 600 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA950826 Spleen .a 102 to 659 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA951372 Spleen .o 22 to 591 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA954597 Spleen .a 102 to 649 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
T29151 blood, white blood cells .q 259 to 594 1 to 338       338/342
(98 %)
3 diff
(99.2 %id)
DC392880 breast, tumor tissue .d 19 to 587 1 to 569       569/569
(100 %)
3 diff
(99.5 %id)
DR001722 fetal brain .a 150 to 874 18 to 742       725/742
(97 %)
6 diff
(99.2 %id)
DC394797 testis .i 1 to 548 1 to 548 exact tiling clone,   548/548
(100 %)
0 diff
(100 %id)
DB029096 testis .h 5 to 548 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB103249 thymus .vb 22 to 588 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DC406865 thymus .vb 2 to 566 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DB165725 thymus .o 2 to 575 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
TI_149302657   .c 1549 to 2345 869 to 78   AAA   792/957
(82 %)
8 diff
(99.2 %id)
TI_149307468   .c 1693 to 2350 745 to 88   AAA   658/973
(67 %)
5 diff
(99.5 %id)
TI_149312263   .c 1547 to 2345 879 to 89   AAA   791/924
(85 %)
15 diff
(98.4 %id)
TI_154033438   .c 1625 to 2350 800 to 78   AAA   723/806
(89 %)
11 diff
(98.7 %id)
TI_159691770   .c 1591 to 2350 847 to 94   AAA   754/1008
(74 %)
33 diff
(96.8 %id)
DC411320 kidney, tumor tissue .vb 2 to 576 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DB205429 trachea .a 118 to 694 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DB208563 trachea .a 121 to 659 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
U71599   .a 1413 to 2017 1 to 605       605/607
(99 %)
11 diff
(98.2 %id)
BM979169 lung, Primary Lung Epithelial Cells .c 1693 to 2350 676 to 19   AAA   658/659
(99 %)
5 diff
(99.3 %id)
BU689597 lung .c 1755 to 2345 609 to 19   AAA   591/591
(100 %)
2 diff
(99.7 %id)
BM980813 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 1611 to 2345 752 to 19   AAA   734/734
(100 %)
2 diff
(99.8 %id)
CA430708 cell lines, Chondrosarcoma .c 1589 to 2350 778 to 19   AAA   760/760
(100 %)
6 diff
(99.3 %id)
DB253340 uterus .a 120 to 691 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB254430 uterus .a 125 to 659 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DB258053 uterus .o 22 to 577 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB270138 uterus .o 21 to 478 2 to 459   capped   458/458
(100 %)
1 diff
(99.8 %id)
DC421832 uterus .vb 1 to 546 1 to 546   tiling clone,   546/546
(100 %)
1 diff
(99.9 %id)
DC421935 uterus .vb 2 to 547 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
W26721 eye, retina .a 1097 to 1420 30 to 355       326/361
(90 %)
10 diff
(97.3 %id)
BP377783 uterus .a 967 to 1547 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
X52335 lymphoid .a 1432 to 1599 1 to 168       168/168
(100 %)
0 diff
(100 %id)
U46433 liver cell line, pancreatic cancer .f 3156 to 3490 349 to 11   tiling clone,   339/350
(96 %)
0 diff
(100 %id)
AU142758   .a 125 to 859 2 to 739   capped   738/856
(86 %)
11 diff
(98.8 %id)
DB384223   .a 1749 to 2308 554 to 1       554/566
(97 %)
15 diff
(97.4 %id)
BE155790 head_neck .h 1 to 570 2 to 571       570/570
(100 %)
0 diff
(100 %id)
DA062038 cerebellum .vb 2 to 481 1 to 480   capped Suspected internal deletion, this clone was ignored 480/480
(100 %)
0 diff
(100 %id)
DB297072 cerebellum .o 22 to 600 2 to 580     Suspected internal deletion, this clone was ignored 579/579
(100 %)
1 diff
(99.9 %id)
DA315488 hippocampus .a 102 to 659 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB308744 hippocampus .o 22 to 591 2 to 572       571/571
(100 %)
1 diff
(99.9 %id)
F08826 brain, total brain .a 102 to 649 2 to 549     This clone was ignored 548/548
(100 %)
0 diff
(100 %id)
F11157 brain, total brain .q 259 to 594 1 to 338     This clone was ignored 338/342
(98 %)
3 diff
(99.2 %id)
BX375991 Neuroblastoma Cot 25-normalized .q 259 to 594 1 to 338   fully sequenced, Suspected internal deletion, suspected internal deletion, this clone was ignored 338/342
(98 %)
3 diff
(99.2 %id)
BX375992 Neuroblastoma Cot 25-normalized .d 19 to 587 1 to 569   fully sequenced, AAA Suspected internal deletion, suspected internal deletion, this clone was ignored 569/569
(100 %)
3 diff
(99.5 %id)
BJ989518 hepatoblastoma .a 150 to 874 18 to 742     Suspected internal deletion, this clone was ignored 725/742
(97 %)
6 diff
(99.2 %id)
BJ989519 hepatoblastoma .i 1 to 548 1 to 548   tiling clone, Suspected internal deletion, this clone was ignored 548/548
(100 %)
0 diff
(100 %id)
BI834254 pooled pancreas and spleen .h 5 to 548 2 to 545       544/544
(100 %)
0 diff
(100 %id)
TI_57163715   .vb 22 to 588 2 to 567       566/566
(100 %)
1 diff
(99.9 %id)
CB118747 Liver .vb 2 to 566 1 to 565       565/565
(100 %)
0 diff
(100 %id)
AU121729 mammary gland .o 2 to 575 2 to 575   capped Suspected internal deletion, this clone was ignored 574/574
(100 %)
1 diff
(99.9 %id)
DB360917 mammary gland .c 1549 to 2345 869 to 78     Suspected internal deletion, this clone was ignored 792/957
(82 %)
8 diff
(99.2 %id)
TI_149307468   .c 1693 to 2350 745 to 88   AAA   658/973
(67 %)
5 diff
(99.5 %id)
TI_149312263   .c 1547 to 2345 879 to 89   AAA   791/924
(85 %)
15 diff
(98.4 %id)
TI_154033438   .c 1625 to 2350 800 to 78   AAA   723/806
(89 %)
11 diff
(98.7 %id)
TI_159691770   .c 1591 to 2350 847 to 94   AAA   754/1008
(74 %)
33 diff
(96.8 %id)
DC411320 kidney, tumor tissue .vb 2 to 576 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DB205429 trachea .a 118 to 694 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DB208563 trachea .a 121 to 659 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
U71599   .a 1413 to 2017 1 to 605       605/607
(99 %)
11 diff
(98.2 %id)
BM979169 lung, Primary Lung Epithelial Cells .c 1693 to 2350 676 to 19   AAA   658/659
(99 %)
5 diff
(99.3 %id)
BM979169 lung, Primary Lung Epithelial Cells .c 1693 to 2350 676 to 19   AAA   658/659
(99 %)
5 diff
(99.3 %id)
BU689597 lung .c 1755 to 2345 609 to 19   AAA   591/591
(100 %)
2 diff
(99.7 %id)
BM980813 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 1611 to 2345 752 to 19   AAA   734/734
(100 %)
2 diff
(99.8 %id)
BM980813 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 1611 to 2345 752 to 19   AAA   734/734
(100 %)
2 diff
(99.8 %id)
CA430708 cell lines, Chondrosarcoma .c 1589 to 2350 778 to 19   AAA   760/760
(100 %)
6 diff
(99.3 %id)
CA430708 cell lines, Chondrosarcoma .c 1589 to 2350 778 to 19   AAA   760/760
(100 %)
6 diff
(99.3 %id)
DB253340 uterus .a 120 to 691 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB254430 uterus .a 125 to 659 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DB258053 uterus .o 22 to 577 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB270138 uterus .o 21 to 478 2 to 459   capped   458/458
(100 %)
1 diff
(99.8 %id)
DC421832 uterus .vb 1 to 546 1 to 546   tiling clone,   546/546
(100 %)
1 diff
(99.9 %id)
DC421935 uterus .vb 2 to 547 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
W26721 eye, retina .a 1097 to 1420 30 to 355       326/361
(90 %)
10 diff
(97.3 %id)
W26721 eye, retina .a 1097 to 1420 30 to 355       326/361
(90 %)
10 diff
(97.3 %id)
BP377783 uterus .a 967 to 1547 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
X52335 lymphoid .a 1432 to 1599 1 to 168       168/168
(100 %)
0 diff
(100 %id)
U46433 liver cell line, pancreatic cancer .f 3156 to 3490 349 to 11   tiling clone,   339/350
(96 %)
0 diff
(100 %id)
U46433 liver cell line, pancreatic cancer .f 3156 to 3490 349 to 11   tiling clone,   339/350
(96 %)
0 diff
(100 %id)
AU142758   .a 125 to 859 2 to 739   capped   738/856
(86 %)
11 diff
(98.8 %id)
DB384223   .a 1749 to 2308 554 to 1       554/566
(97 %)
15 diff
(97.4 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r-u, .s, .t, .u, .va, .vb, .vc, .vd Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI