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Gene ZNF569TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
119 supporting clones for gene ZNF569 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC059407 Placenta, pre-eclamptic .a 1 to 3684 1 to 3685 S132F R133Q H134T N135Q L136S ... tiling clone, available from MGC, AAA   3685/3685
(100 %)
2 diff
(100.0 %id)
CB991008 placenta, pre-eclamptic placenta .a 1 to 636 28 to 675   available from MGC,   648/816
(79 %)
22 diff
(97.4 %id)
CB151734 cervix, Uterine .b 1 to 611 1 to 611   tiling clone,   611/611
(100 %)
0 diff
(100 %id)
DB488026 hypothalamus .b 13 to 693 1 to 679       679/681
(99 %)
9 diff
(98.7 %id)
AL833408 human adipose .b 17 to 4073 1 to 4058 Y41H tiling clone, available from DKFZ, AAA   4058/4058
(100 %)
5 diff
(99.9 %id)
AY835704   .b 18 to 4073 1 to 4056 exact tiling clone, AAA   4056/4056
(100 %)
0 diff
(100 %id)
NM_152484.2   .b 18 to 4073 1 to 4056 exact RefSeq, AAA   4056/4056
(100 %)
0 diff
(100 %id)
DA127056 cerebellum .b 26 to 560 2 to 536   capped   535/536
(99 %)
2 diff
(99.7 %id)
BX952388   .b 27 to 626 1 to 600       600/600
(100 %)
1 diff
(99.9 %id)
DA065852 cerebellum .b 49 to 598 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA123036 cerebellum .b 50 to 605 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB064284 testis .b 50 to 589 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB291012 uterus .b 50 to 621 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DR002517 fetal brain .b 67 to 765 8 to 706       699/706
(99 %)
6 diff
(99.2 %id)
DB092284 testis .b 181 to 714 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
BG718734 testis .b 216 to 869 6 to 661       656/661
(99 %)
11 diff
(98.4 %id)
BU431773 lymph .b 239 to 631 8 to 401       394/401
(98 %)
8 diff
(98.1 %id)
TI_154153723   .b 239 to 732 81 to 575       495/502
(98 %)
10 diff
(98.1 %id)
AK289987 hippocampus .b 245 to 3152 1 to 2908 exact     2908/2908
(100 %)
0 diff
(100 %id)
DA321581 hippocampus .b 246 to 801 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB287618 uterus .b 261 to 714 2 to 456   capped   455/455
(100 %)
1 diff
(99.8 %id)
DA110930 cerebellum .b 271 to 857 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DB168573 kidney, tumor tissue .b 274 to 837 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
CN392798 embryonic stem cells, DMSO-treated H9 cellline .b 532 to 1056 1 to 525       525/525
(100 %)
0 diff
(100 %id)
AI431925 Kidney .b 556 to 1093 538 to 1       538/538
(100 %)
0 diff
(100 %id)
AJ710345 heart .b 561 to 1055 1 to 492       492/492
(100 %)
2 diff
(99.6 %id)
BE464467 pooled germ cell tumors .b 621 to 858 238 to 1       238/238
(100 %)
4 diff
(98.4 %id)
AK122846 hippocampus .b 697 to 4091 1 to 3395   available from FLJ,   3395/3395
(100 %)
2 diff
(100.0 %id)
DA293414 hippocampus .b 698 to 1270 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB225317 trachea .b 752 to 1298 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
TI_1320129799   .b 921 to 2125 20 to 1227       1208/1230
(98 %)
43 diff
(96.6 %id)
AI284154 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 926 to 1375 1 to 450     Submitted on the opposite strand 450/450
(100 %)
1 diff
(99.8 %id)
AI954096 normal epithelium, ovary .b 927 to 1005 79 to 1       79/79
(100 %)
2 diff
(97.5 %id)
TI_1320129850   .b 936 to 1929 33 to 1025       993/1152
(86 %)
7 diff
(99.4 %id)
AI216410 pooled .b 963 to 1304 345 to 4       342/345
(99 %)
0 diff
(100 %id)
CR744747   .b 1058 to 1510 453 to 1     Submitted on the opposite strand 453/453
(100 %)
0 diff
(100 %id)
AK056615 tongue .b 1221 to 3572 1 to 2352   available from FLJ,   2352/2352
(100 %)
2 diff
(100.0 %id)
DA762061 tongue .b 1222 to 1750 2 to 529   capped   528/528
(100 %)
2 diff
(99.7 %id)
AV746157 Pituitary .b 1254 to 1502 1 to 243       243/246
(98 %)
10 diff
(96.0 %id)
TI_1320129793   .b 1375 to 2535 1 to 1157       1157/1241
(93 %)
15 diff
(98.8 %id)
TI_1320129844   .b 1384 to 2412 10 to 1031       1022/1157
(88 %)
15 diff
(98.8 %id)
DB297271 cerebellum .b 1533 to 2053 545 to 25       521/545
(95 %)
0 diff
(100 %id)
TI_1320132926   .b 1539 to 2686 1181 to 50       1132/1228
(92 %)
0 diff
(100 %id)
TI_1320129845   .b 1547 to 2664 1 to 1113       1113/1197
(92 %)
6 diff
(99.5 %id)
TI_1320129794   .b 1554 to 2675 4 to 1123       1120/1212
(92 %)
18 diff
(98.6 %id)
DA615339   .b 1936 to 2514 2 to 581   capped   580/580
(100 %)
3 diff
(99.5 %id)
TI_1320130435   .b 2148 to 2686 1 to 539       539/1238
(43 %)
18 diff
(98.6 %id)
CA395211 eye, RPE/choroid .b 2206 to 2711 1 to 506       506/506
(100 %)
0 diff
(100 %id)
BX281984 brain .b 2559 to 3071 1 to 513       513/513
(100 %)
0 diff
(100 %id)
BI755869 brain .b 2559 to 3340 1 to 782       782/782
(100 %)
1 diff
(99.9 %id)
TI_57216518   .b 2559 to 3340 31 to 812       782/812
(96 %)
6 diff
(99.3 %id)
BI869355 adenocarcinoma, cell line, Liver .b 2674 to 3563 1 to 893       893/896
(99 %)
25 diff
(97.3 %id)
TI_57231373   .b 2674 to 3563 90 to 982       893/896
(99 %)
25 diff
(97.3 %id)
AI124562 brain, pooled frontal lobe .b 2682 to 3148 9 to 476     Submitted on the opposite strand 468/476
(98 %)
6 diff
(98.8 %id)
BG777549 adenocarcinoma, Prostate .b 2718 to 3318 1 to 621       621/621
(100 %)
44 diff
(93.0 %id)
BQ959580 leiomyosarcoma, uterus .b 2721 to 3601 1 to 888       888/888
(100 %)
12 diff
(98.7 %id)
CD511885 Pooled-Skin .b 2757 to 3510 1 to 758       758/858
(88 %)
8 diff
(99.1 %id)
DB325360 tongue .b 3032 to 3572 542 to 1       542/542
(100 %)
1 diff
(99.9 %id)
AA504094 germinal center B cell .b 3111 to 3356 1 to 246       246/246
(100 %)
0 diff
(100 %id)
BG164971 hypernephroma, cell line, Kidney .b 3334 to 4022 1 to 687   AAA   687/715
(96 %)
5 diff
(99.4 %id)
DB557482 hypothalamus .b 3350 to 4073 1 to 723     Submitted on the opposite strand 723/723
(100 %)
5 diff
(99.4 %id)
DB514243 testis .b 3382 to 4087 1 to 705     Submitted on the opposite strand 705/705
(100 %)
5 diff
(99.3 %id)
DB543919 hippocampus .b 3417 to 4091 1 to 676     Submitted on the opposite strand 676/676
(100 %)
7 diff
(99.0 %id)
BX097174 multiple sclerosis lesions .b 3468 to 4073 1 to 607   AAA   607/607
(100 %)
2 diff
(99.7 %id)
DB307728 hippocampus .b 3579 to 4091 515 to 1       515/515
(100 %)
4 diff
(99.3 %id)
CK903412 Islets of Langerhans, Pancreas .b 3592 to 3818 1 to 228       228/228
(100 %)
2 diff
(99.2 %id)
BM967337 Islets of Langerhans, Pancreas .b 3592 to 4036 1 to 445       445/445
(100 %)
1 diff
(99.8 %id)
BM967341 Islets of Langerhans, Pancreas .b 3592 to 4073 1 to 482       482/482
(100 %)
2 diff
(99.6 %id)
BI964741 Islets of Langerhans, Pancreas .b 3606 to 3992 28 to 414       387/414
(93 %)
6 diff
(98.6 %id)
DB543410 hippocampus .b 3627 to 4091 1 to 465     Submitted on the opposite strand 465/465
(100 %)
0 diff
(100 %id)
DB546899 hippocampus .b 3634 to 4091 1 to 458     Submitted on the opposite strand 458/458
(100 %)
0 diff
(100 %id)
AW150064 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 3637 to 4077 441 to 1       441/441
(100 %)
0 diff
(100 %id)
N47013 multiple sclerosis lesions .b 3638 to 4073 437 to 1       437/437
(100 %)
2 diff
(99.6 %id)
BI549133 brain, hippocampus .b 3668 to 4073 1 to 401   available from MGC, AAA   401/401
(100 %)
8 diff
(98.1 %id)
BC032896 Brain, hippocampus .b 3672 to 4073 5 to 406   available from MGC, AAA   402/402
(100 %)
0 diff
(100 %id)
TI_44166834   .b 3672 to 4073 108 to 504   AAA   397/504
(78 %)
6 diff
(98.9 %id)
CK903411 Islets of Langerhans, Pancreas .b 3749 to 4073 338 to 14   AAA   325/325
(100 %)
1 diff
(99.7 %id)
DB475091 hippocampus .c 1 to 426 1 to 426       426/428
(99 %)
6 diff
(98.6 %id)
DB478255 hippocampus .c 1 to 494 1 to 494   tiling clone,   494/494
(100 %)
0 diff
(100 %id)
DA479414   .c 33 to 610 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB141714 thymus .c 71 to 575 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
TI_1320132924   .c 317 to 1374 42 to 1086       1043/1190
(87 %)
27 diff
(97.8 %id)
TI_1320133185   .c 317 to 1052 743 to 8       736/1049
(70 %)
2 diff
(99.9 %id)
BC117219 Liver, PCR rescued clones .c 323 to 2240 1 to 1918 exact tiling clone,   1918/1918
(100 %)
0 diff
(100 %id)
TI_1320133189   .c 323 to 1326 1007 to 6       1002/1036
(96 %)
0 diff
(100 %id)
BC038737 testis .d 1 to 1724 1 to 1723 H331Q S332K R333K tiling clone, available from MGC,   1723/1729
(99 %)
8 diff
(99.6 %id)
DB448239 testis .d 2 to 432 1 to 428   tiling clone,   428/430
(99 %)
11 diff
(97.5 %id)
BI462732 testis .d 4 to 782 9 to 795   available from MGC,   786/865
(90 %)
29 diff
(96.7 %id)
DR000875 fetal brain .d 642 to 1393 8 to 758       751/758
(99 %)
11 diff
(98.6 %id)
DB090742 testis .e 1 to 571 2 to 573 T2X tiling clone, capped   572/572
(100 %)
1 diff
(99.9 %id)
DA336377 hippocampus .f 1 to 568 2 to 569   tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
AL110408 testis .f 558 to 932 1 to 376   tiling clone, fully sequenced, Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 376/376
(100 %)
7 diff
(98.2 %id)
AL110409 testis .f 871 to 1345 493 to 19   tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 475/475
(100 %)
0 diff
(100 %id)
DA609979   .g 1 to 419 6 to 425   capped   424/424
(100 %)
2 diff
(99.6 %id)
BF572585 melanotic melanoma, high MDR, skin .g 1 to 641 2 to 636       636/884
(71 %)
24 diff
(97.3 %id)
DA242484 brain .g 1 to 584 2 to 585   tiling clone, capped   584/586
(99 %)
2 diff
(99.7 %id)
DA105056 cerebellum .g 17 to 573 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB286112 uterus .g 17 to 573 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA461728 tongue, tumor tissue .g 34 to 604 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB164021 thymus .g 56 to 654 2 to 601 exact tiling clone, capped   600/600
(100 %)
1 diff
(99.9 %id)
BX279642 Kidney .g 67 to 444 1 to 379       379/379
(100 %)
1 diff
(99.8 %id)
DB067773 testis .g 67 to 641 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA183367 amygdala .h 1 to 522 3 to 524   tiling clone, capped   523/523
(100 %)
0 diff
(100 %id)
DA338565 hippocampus .h 29 to 605 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA312977 hippocampus .h 55 to 601 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB449216 testis .h 112 to 812 1 to 698 Q20X K21E T31N V32* tiling clone,   698/698
(100 %)
11 diff
(98.5 %id)
BQ711907 Spleen .i 1 to 702 6 to 716 R12T tiling clone,   716/942
(76 %)
23 diff
(97.6 %id)
DT217970 brain .j 1 to 636 11 to 645 exact tiling clone,   635/645
(98 %)
6 diff
(99.1 %id)
DA792796 brain .k 1 to 622 2 to 623 exact tiling clone, capped   622/622
(100 %)
2 diff
(99.7 %id)
DB231765 trachea .k 16 to 580 2 to 566 exact tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
DB066709 testis .k 36 to 565 2 to 531 exact capped   530/530
(100 %)
0 diff
(100 %id)
DA214151 brain .k 51 to 571 2 to 524 exact capped   523/523
(100 %)
3 diff
(99.5 %id)
DA324094 hippocampus .l-u 1 to 488 5 to 493 R4Q E5G A6G A7R R8S ... tiling clone, capped   492/492
(100 %)
2 diff
(99.6 %id)
CN392797 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .l-u 31 to 572 1 to 542 exact tiling clone,   542/542
(100 %)
3 diff
(99.5 %id)
BX502253 Liver .l-u 205 to 454 1 to 250       250/250
(100 %)
11 diff
(95.6 %id)
DA319158 hippocampus .m 1 to 567 2 to 568 exact tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
CR736952 pooled .n 1 to 454 1 to 454 exact tiling clone,   454/454
(100 %)
1 diff
(99.8 %id)
AW175651 breast .o 1 to 321 1 to 321 V4* tiling clone,   321/321
(100 %)
4 diff
(98.8 %id)
DB127588 thymus Gene ZNF569, variant not shown       capped Suspected internal deletion, this clone was ignored    
TI_1320129847   Gene ZNF569, variant not shown         Suspected internal deletion, this clone was ignored    
T69803 liver and spleen Gene ZNF569, variant not shown         This clone was ignored    
T70791 liver and spleen Gene ZNF569, variant not shown         This clone was ignored    
BF979521 testis Gene ZNF569, variant not shown         This clone was ignored    
BF980140 testis Gene ZNF569, variant not shown         This clone was ignored    
CA337006 posterior rhombomeres 5-8 (4 pooled) Gene ZNF569, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n, .o Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C