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Gene ZCWPW1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
120 supporting clones for gene ZCWPW1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA321268 bone marrow .e 538 to 836 1 to 303       303/308
(98 %)
10 diff
(96.8 %id)
AK000919 whole embryo, mainly head .e 448 to 2085 1 to 1638 exact tiling clone, available from FLJ,   1638/1638
(100 %)
1 diff
(100.0 %id)
AK295426 corpus callosum .g 1 to 1202 1228 to 27 exact tiling clone, AAA Submitted on the opposite strand 1202/1202
(100 %)
2 diff
(99.9 %id)
AK299989   .j 1 to 1004 1 to 1004 N71D K96E tiling clone,   1004/1004
(100 %)
4 diff
(99.7 %id)
AK300745   .b 101 to 2210 1 to 2110 exact tiling clone,   2110/2110
(100 %)
1 diff
(100.0 %id)
AK316553 testis .c 1 to 1010 9 to 1018   tiling clone,   1010/1010
(100 %)
1 diff
(100.0 %id)
AL136735 testis .a 1 to 2331 6 to 2337 T487N K488Q P489A R490K G491R ... tiling clone, available from DKFZ, AAA   2337/2337
(100 %)
1 diff
(100.0 %id)
AW753762 colon .a 392 to 835 447 to 1       447/447
(100 %)
23 diff
(94.9 %id)
BC002725 Uterus, endometrium adenocarcinoma .c 592 to 2604 1 to 2013 T32A tiling clone, available from MGC, AAA   2013/2013
(100 %)
5 diff
(99.8 %id)
BE089916 breast .i 654 to 978 1 to 326   tiling clone,   326/328
(99 %)
7 diff
(97.9 %id)
BE938225 testis_normal .b 1429 to 1858 450 to 21       430/450
(95 %)
0 diff
(100 %id)
BF896737 marrow .a 1914 to 2219 8 to 313       306/313
(97 %)
6 diff
(98.1 %id)
BF923839 nervous_tumor .a 2042 to 2236 203 to 10     Submitted on the opposite strand 194/203
(95 %)
0 diff
(100 %id)
BG459644   .b 1700 to 2193 492 to 1     Submitted on the opposite strand 492/519
(94 %)
12 diff
(97.7 %id)
BG460863   .a 1868 to 2314 451 to 1     Submitted on the opposite strand 451/535
(84 %)
12 diff
(97.8 %id)
BG461006   .a 1868 to 2317 468 to 13     Submitted on the opposite strand 456/568
(80 %)
0 diff
(100 %id)
BG461090   .a 1941 to 2314 380 to 1     Submitted on the opposite strand 380/581
(65 %)
14 diff
(97.6 %id)
BG461253   .a 1868 to 2314 453 to 1     Submitted on the opposite strand 453/554
(81 %)
15 diff
(97.3 %id)
BG461265   .a 1868 to 2314 459 to 1     Submitted on the opposite strand 459/560
(81 %)
19 diff
(96.7 %id)
DA100662 cerebellum .m 1 to 592 2 to 593 exact tiling clone, capped   592/592
(100 %)
1 diff
(99.9 %id)
DA280610 corpus callosum .a 13 to 588 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DC329351 corpus callosum .a 1797 to 2331 561 to 27   AAA Submitted on the opposite strand 535/535
(100 %)
2 diff
(99.7 %id)
DA351702 substantia nigra .a 12 to 567 2 to 558   capped   557/557
(100 %)
7 diff
(98.8 %id)
CA406045 adipose .b 1527 to 2017 1 to 491       491/494
(99 %)
1 diff
(99.8 %id)
BP211571 cerebrum .k 1 to 582 1 to 582 exact tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
BP212337 cerebrum .n 1 to 583 1 to 583 exact tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
CR739442   .l-u 1 to 688 1 to 688 I16L tiling clone,   688/688
(100 %)
1 diff
(99.9 %id)
CV026274 mixed .b 697 to 1375 1 to 673       673/682
(98 %)
7 diff
(99.0 %id)
AL048981 testis .a 280 to 811 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
EC478112 Prostate .a 2009 to 2115 110 to 4       107/110
(97 %)
0 diff
(100 %id)
EC580724 Prostate .a 2009 to 2113 107 to 3       105/107
(98 %)
0 diff
(100 %id)
GD135924   .b 537 to 601 1 to 60       60/71
(84 %)
3 diff
(95.8 %id)
DB447154 testis .c 181 to 606 1 to 426       426/426
(100 %)
1 diff
(99.8 %id)
DB453848 testis .h 25 to 526 1 to 502       502/502
(100 %)
0 diff
(100 %id)
DB519303 testis .a 1902 to 2331 1 to 430     Submitted on the opposite strand 430/430
(100 %)
0 diff
(100 %id)
AU117432 whole embryo, mainly head .e 449 to 1328 2 to 880   capped   879/879
(100 %)
9 diff
(99.0 %id)
AU144263 whole embryo, mainly head .e 1531 to 2086 553 to 1       553/564
(98 %)
18 diff
(96.9 %id)
DA582627 lung .c 315 to 857 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
T55346 ovary .h 663 to 975 317 to 1   tiling clone,   317/419
(75 %)
6 diff
(98.6 %id)
AA055852 colon, tumor .a 1871 to 2169 1 to 306       306/336
(91 %)
16 diff
(95.3 %id)
AA133438 colon, tumor .d 598 to 996 1 to 416       416/416
(100 %)
24 diff
(94.3 %id)
AA133439 colon, tumor .d 1151 to 1545 395 to 1   tiling clone,   395/395
(100 %)
1 diff
(99.8 %id)
AA447236   .b 935 to 1143 1 to 210       210/210
(100 %)
2 diff
(99.1 %id)
AA482998 Ewing's sarcoma .a 2104 to 2331 1 to 228   AAA   228/228
(100 %)
4 diff
(98.3 %id)
AA836507 germinal center B cell .a 1981 to 2331 389 to 40   AAA   350/350
(100 %)
3 diff
(99.2 %id)
AI150395   .a 1945 to 2332 389 to 3       387/389
(99 %)
0 diff
(100 %id)
AI216678   .a 2069 to 2332 266 to 3       264/266
(99 %)
0 diff
(100 %id)
AI394694 B-cell, chronic lymphotic leukemia .a 1945 to 2332 390 to 5       386/390
(98 %)
0 diff
(100 %id)
AI650718 pooled germ cell tumors .h 103 to 490 388 to 1       388/388
(100 %)
0 diff
(100 %id)
AI969074 pooled germ cell tumors .b 198 to 512 315 to 1       315/315
(100 %)
0 diff
(100 %id)
CF142457 CNCAP(3)T-225 cell line, Prostate .b 942 to 1303 1 to 362       362/362
(100 %)
6 diff
(98.4 %id)
BE551909 pooled germ cell tumors .h 76 to 393 1 to 318     Submitted on the opposite strand 318/318
(100 %)
4 diff
(98.8 %id)
BE395614 endometrium, adenocarcinoma cell line, uterus .c 620 to 1121 1 to 502       502/503
(99 %)
1 diff
(99.9 %id)
BF195822 Kidney .b 207 to 603 398 to 1       398/398
(100 %)
2 diff
(99.5 %id)
BF222828 pooled germ cell tumors .h 77 to 557 1 to 481     Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
BG391077 embryonal carcinoma, cell line, testis .b 500 to 1182 1 to 682       684/683
(100 %)
2 diff
(99.8 %id)
BG723334 testis .h 18 to 780 1 to 766       766/768
(99 %)
19 diff
(97.6 %id)
BI256491 cervical carcinoma cell line, cervix .d 1 to 826 1 to 828   tiling clone,   824/828
(99 %)
9 diff
(99.0 %id)
BI463676 testis .c 176 to 845 1 to 671       671/726
(92 %)
21 diff
(97.2 %id)
BI668728 brain, hypothalamus .i 1 to 672 7 to 678   tiling clone,   678/678
(100 %)
4 diff
(99.5 %id)
BM550630 melanotic melanoma, skin .h 71 to 663 1 to 595       595/1138
(52 %)
11 diff
(99.1 %id)
BQ060983 lymph, lymphoma, cell line .f 1 to 840 1 to 850 N195D E202* tiling clone,   850/1007
(84 %)
42 diff
(95.9 %id)
CD243484 testis .a 1457 to 2191 1 to 741   tiling clone,   741/959
(77 %)
17 diff
(98.3 %id)
TI_44344165   .i 1 to 672 94 to 765       673/765
(87 %)
6 diff
(99.3 %id)
NM_017984.3   .a 1 to 2331 6 to 2336 exact RefSeq, AAA   2336/2336
(100 %)
0 diff
(100 %id)
DC378310   .c 293 to 693 1 to 403       403/403
(100 %)
2 diff
(99.6 %id)
DA874068 Prostate .a 12 to 575 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
TI_1948132081   .b 694 to 1332 121 to 757       637/1394
(45 %)
13 diff
(99.1 %id)
TI_1948132082   .b 694 to 1543 124 to 978       853/1165
(73 %)
16 diff
(98.7 %id)
TI_1948132083   .d 502 to 1429 1053 to 123   tiling clone,   931/1289
(72 %)
25 diff
(98.1 %id)
TI_1948132084   .c 1688 to 2462 908 to 129       780/1303
(59 %)
19 diff
(98.6 %id)
TI_1948132400   .b 694 to 1594 120 to 1011   tiling clone,   892/1401
(63 %)
24 diff
(98.3 %id)
TI_1948132401   .b 694 to 1572 133 to 1016       884/1149
(76 %)
18 diff
(98.5 %id)
TI_1948132402   .d 502 to 1429 1044 to 122       923/1262
(73 %)
17 diff
(98.7 %id)
TI_1948132403   .c 1645 to 2462 948 to 129       820/1297
(63 %)
25 diff
(98.1 %id)
TI_1948132712   .b 694 to 1588 120 to 1014       895/1412
(63 %)
23 diff
(98.4 %id)
TI_1948132713   .b 694 to 1493 125 to 930       806/1176
(68 %)
14 diff
(98.9 %id)
TI_1948132714   .c 1539 to 2462 1047 to 124       924/1303
(70 %)
22 diff
(98.4 %id)
TI_1948133021   .b 694 to 1323 124 to 758       635/1433
(44 %)
28 diff
(98.1 %id)
TI_1948133022   .b 694 to 1585 125 to 1022       898/1136
(79 %)
21 diff
(98.2 %id)
TI_1948133023   .c 1548 to 2462 1025 to 121       905/1257
(71 %)
20 diff
(98.5 %id)
TI_1948133024   .c 1840 to 2462 755 to 129       627/1441
(43 %)
15 diff
(99.0 %id)
DA902354   .a 12 to 588 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DC389752 Spleen .c 289 to 823 1 to 535   tiling clone,   535/535
(100 %)
0 diff
(100 %id)
BP346419 synovial membrane .a 11 to 591 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DN997901 breast cancer, Mammary gland (cancer tissue) .h 37 to 790 1 to 753   tiling clone,   753/753
(100 %)
4 diff
(99.5 %id)
DC394503 esophageal, tumor tissue .o 1 to 488 1 to 488 exact tiling clone,   488/488
(100 %)
0 diff
(100 %id)
DB020475 testis .h 1 to 548 2 to 549   tiling clone, capped   548/548
(100 %)
0 diff
(100 %id)
DB335823.
matches multiple genes
testis .a 1826 to 2331 506 to 1     also hits gene SLC26A8 506/506
(100 %)
2 diff
(99.7 %id)
DB020983 testis .h 24 to 582 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB023604 testis .a 10 to 544 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DB024318 testis .a 12 to 556 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DB028888 testis .h 26 to 566 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
DB029502 testis .e 1 to 570 2 to 572   tiling clone, capped   571/571
(100 %)
12 diff
(97.9 %id)
DB031683 testis .h 1 to 566 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DC396499 testis .c 303 to 840 1 to 547       547/587
(93 %)
12 diff
(98.0 %id)
DC397121 testis .c 296 to 849 1 to 554       554/554
(100 %)
2 diff
(99.7 %id)
DC397212 testis .c 303 to 669 1 to 367       367/367
(100 %)
1 diff
(99.8 %id)
DB043004 testis .a 43 to 598 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DC398720 testis .b 1 to 584 1 to 588   tiling clone,   588/588
(100 %)
4 diff
(99.4 %id)
DC426787 testis .b 1668 to 2210 543 to 1       543/544
(99 %)
1 diff
(99.9 %id)
DB051309 testis .e 333 to 894 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DC399044 testis .c 225 to 804 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
DC399896 testis .c 303 to 831 1 to 529       529/529
(100 %)
1 diff
(99.9 %id)
DC400541 testis .c 1 to 570 9 to 578       570/570
(100 %)
1 diff
(99.9 %id)
BP360311 thalamus .a 11 to 592 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC405176 thymus .c 305 to 867 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DB126880 thymus .a 124 to 654 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
TI_149291219   .c 1920 to 2604 747 to 63   AAA   685/694
(98 %)
6 diff
(99.2 %id)
TI_149300680   .a 1569 to 2378 872 to 72   AAA   803/954
(84 %)
16 diff
(98.4 %id)
TI_154173389   .b 949 to 1574 78 to 703       625/626
(99 %)
10 diff
(98.5 %id)
DB190979 lung, tumor tissue .a 13 to 597 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BU682053 lung .c 1968 to 2604 657 to 19   AAA   639/639
(100 %)
2 diff
(99.7 %id)
BM976699 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1712 to 2378 684 to 19   AAA   666/666
(100 %)
3 diff
(99.6 %id)
CA313330 Human Lung Epithelial cells, lung .f 457 to 1118 680 to 19   tiling clone, AAA   662/662
(100 %)
1 diff
(99.9 %id)
DB288116 uterus .a 12 to 583 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
AI904808 breast .a 11 to 592 1 to 582     This clone was ignored 582/582
(100 %)
0 diff
(100 %id)
AK093038 testis .c 305 to 867 1 to 563   available from FLJ, Suspected internal deletion, this clone was ignored 563/563
(100 %)
1 diff
(99.9 %id)
AK302108 testis .a 124 to 654 2 to 532     Suspected internal deletion, this clone was ignored 531/531
(100 %)
0 diff
(100 %id)
AX747875   .c 1920 to 2604 747 to 63     Suspected internal deletion, this clone was ignored 685/694
(98 %)
6 diff
(99.2 %id)
DA820552 pericardium .a 1569 to 2378 872 to 72   capped This clone was ignored 803/954
(84 %)
16 diff
(98.4 %id)
DB327805 pericardium .b 949 to 1574 78 to 703     This clone was ignored 625/626
(99 %)
10 diff
(98.5 %id)
DC397637 testis .a 13 to 597 2 to 586     Suspected internal deletion, this clone was ignored 585/585
(100 %)
0 diff
(100 %id)
DC413605 ovary, tumor tissue .c 1968 to 2604 657 to 19     Suspected internal deletion, this clone was ignored 639/639
(100 %)
2 diff
(99.7 %id)
DC426895 ovary, tumor tissue .a 1712 to 2378 684 to 19     Suspected internal deletion, this clone was ignored 666/666
(100 %)
3 diff
(99.6 %id)
BM976699 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1712 to 2378 684 to 19   AAA   666/666
(100 %)
3 diff
(99.6 %id)
CA313330 Human Lung Epithelial cells, lung .f 457 to 1118 680 to 19   tiling clone, AAA   662/662
(100 %)
1 diff
(99.9 %id)
CA313330 Human Lung Epithelial cells, lung .f 457 to 1118 680 to 19   tiling clone, AAA   662/662
(100 %)
1 diff
(99.9 %id)
DB288116 uterus .a 12 to 583 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n, .o Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C