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Gene TUBE1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
258 supporting clones for gene TUBE1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA310511   .a 1237 to 1716 1 to 485       490/485
(101 %)
9 diff
(98.2 %id)
AA327840   .a 1319 to 1704 1 to 391       391/392
(99 %)
8 diff
(98.0 %id)
AA345848 gall bladder .a 1421 to 1840 1 to 418       418/419
(99 %)
7 diff
(98.4 %id)
AF201334   .a 290 to 1717 1 to 1428 exact     1428/1428
(100 %)
0 diff
(100 %id)
AI525785 Prostate .d 412 to 972 9 to 578       570/838
(68 %)
30 diff
(96.5 %id)
AK026242 human small intestine .a 211 to 2050 1 to 1840 exact tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1840/1840
(100 %)
1 diff
(100.0 %id)
AK126191 thymus .f 1469 to 5078 1 to 3609   tiling clone, available from FLJ,   3609/3609
(100 %)
2 diff
(100.0 %id)
AW956694   .a 1422 to 1999 1 to 579       579/579
(100 %)
16 diff
(97.3 %id)
AW977618   .j 28 to 535 7 to 514       508/515
(98 %)
13 diff
(97.5 %id)
BC025405 testis .a 271 to 2350 1 to 2080 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 2080/2080
(100 %)
0 diff
(100 %id)
BC031101 testis .a 223 to 2313 1 to 2091 D91G P469R available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 2091/2091
(100 %)
4 diff
(99.9 %id)
BE763956 nervous_tumor .a 1273 to 1636 373 to 10       364/373
(97 %)
1 diff
(99.8 %id)
BF855850 prostate_normal .a 266 to 598 27 to 356       330/356
(92 %)
6 diff
(98.4 %id)
BF855853 prostate_normal .a 276 to 598 1 to 325       325/325
(100 %)
6 diff
(98.2 %id)
BG314754   .a 751 to 955 1 to 206       206/206
(100 %)
3 diff
(98.6 %id)
DA039448 bladder .f 2831 to 3367 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
DA045423 bladder .a 239 to 803 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BM263877 Pancreas, Purified pancreatic islet .a 1795 to 2352 561 to 4       558/561
(99 %)
0 diff
(100 %id)
BM264176 Pancreas, Purified pancreatic islet .a 1418 to 2039 1 to 621       621/621
(100 %)
1 diff
(99.9 %id)
DA053989 cerebellum .a 222 to 779 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA077634 cerebellum .e 1 to 568 2 to 569 exact tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DA105927 cerebellum .f 36 to 587 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DA106954 cerebellum .f 1511 to 2086 2 to 577   tiling clone, capped   576/576
(100 %)
0 diff
(100 %id)
DA111412 cerebellum .f 2494 to 3055 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA160210 amygdala .a 177 to 740 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA217283 brain .i 1 to 555 2 to 556 exact tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
DA221716 brain .j 1 to 561 5 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DA281392 corpus callosum .a 227 to 721 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DA332644 hippocampus .j 25 to 611 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
DA346529 substantia nigra .f 1 to 551 2 to 552   tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
DA418058 thalamus .a 193 to 724 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
BX102508 carcinoid, lung .f 762 to 1487 726 to 1     Submitted on the opposite strand 726/726
(100 %)
0 diff
(100 %id)
CB266759 adipose .a 2139 to 2356 1 to 219       219/228
(96 %)
2 diff
(99.2 %id)
BU660326 blood .a 262 to 670 1 to 410       410/410
(100 %)
13 diff
(96.9 %id)
CN363306 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 1 to 731 13 to 743 exact tiling clone,   731/743
(98 %)
8 diff
(99.0 %id)
CN363307 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 997 to 1477 1 to 482       482/482
(100 %)
1 diff
(99.8 %id)
CN363308 embryonic stem cells, DMSO-treated H9 cellline .a 338 to 579 1 to 242       242/242
(100 %)
1 diff
(99.6 %id)
DA426805 colon .a 243 to 810 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
CR609343 Neuroblastoma Cot 25-normalized .b 30 to 2050 1 to 2021 exact tiling clone,   2021/2021
(100 %)
0 diff
(100 %id)
CR613971 fetal brain .d 375 to 1546 1 to 1172   tiling clone,   1172/1172
(100 %)
0 diff
(100 %id)
AL523185 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 30 to 1048 1 to 1012   fully sequenced,   1012/1012
(100 %)
8 diff
(99.3 %id)
AL562177 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 1018 to 2050 1025 to 1   fully sequenced,   1025/1025
(100 %)
15 diff
(98.6 %id)
AL527119 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 278 to 1240 1 to 954       954/954
(100 %)
11 diff
(98.9 %id)
AL527191 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1284 to 2318 1023 to 1       1023/1050
(97 %)
17 diff
(98.4 %id)
BX412937 brain, fetal brain .a 1466 to 2342 881 to 4       878/892
(98 %)
4 diff
(99.6 %id)
BX419037 brain, fetal brain .d 375 to 1447 1 to 1059       1059/1126
(94 %)
21 diff
(98.2 %id)
AL580252 T cells from T cell leukemia .a 1308 to 2321 1029 to 1       1029/1032
(99 %)
78 diff
(92.5 %id)
AL580253 T cells from T cell leukemia .a 255 to 1189 1 to 936       936/936
(100 %)
1 diff
(99.9 %id)
CV024401 mixed .a 290 to 824 1 to 535       535/535
(100 %)
8 diff
(98.6 %id)
CV024690 mixed .a 290 to 840 1 to 551       551/551
(100 %)
7 diff
(98.8 %id)
BP225028   .g 1 to 582 1 to 583 K69E F115I V116C tiling clone,   583/583
(100 %)
2 diff
(99.7 %id)
DA472877   .a 193 to 757 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
AL597748   .a 222 to 553 1 to 336       336/336
(100 %)
9 diff
(97.4 %id)
AL598964   .a 226 to 693 1 to 468       468/468
(100 %)
0 diff
(100 %id)
AL589478 human spinal cord .f 439 to 880 28 to 468   tiling clone,   441/468
(94 %)
6 diff
(98.8 %id)
AL134732 brain .f 2268 to 2954 1 to 689       689/692
(99 %)
5 diff
(99.3 %id)
BX478982   .f 1920 to 2605 1 to 687       687/687
(100 %)
6 diff
(99.2 %id)
AL701310 human skeletal muscle .a 228 to 669 1 to 442       442/442
(100 %)
1 diff
(99.8 %id)
DN913620   .f 1762 to 2292 531 to 1       531/531
(100 %)
2 diff
(99.7 %id)
DN913621   .f 710 to 944 23 to 256       234/256
(91 %)
6 diff
(97.7 %id)
DN917086   .f 1673 to 2292 617 to 1       617/617
(100 %)
5 diff
(99.2 %id)
DN917087   .f 710 to 1288 23 to 600       578/600
(96 %)
8 diff
(98.7 %id)
DA485161 brain .a 221 to 782 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
FN048295 breast carcinoma .a 1 to 87 8 to 94   tiling clone,   87/95
(91 %)
1 diff
(99.0 %id)
FN132982 breast carcinoma .a 1149 to 1242 100 to 9     Submitted on the opposite strand 92/100
(92 %)
2 diff
(98.0 %id)
D60201   .a 2088 to 2348 265 to 5       261/265
(98 %)
0 diff
(100 %id)
D60202   .a 1160 to 1556 1 to 395       395/402
(98 %)
4 diff
(99.1 %id)
D60212   .d 1275 to 1553 278 to 1   tiling clone,   278/278
(100 %)
1 diff
(99.7 %id)
D60213   .d 360 to 852 1 to 493       493/493
(100 %)
1 diff
(99.8 %id)
AV693807 hepatocellular carcinoma .a 1441 to 1823 1 to 377       377/387
(97 %)
4 diff
(99.0 %id)
DB442030.
matches multiple genes
testis .a 226 to 662 1 to 437     also hits gene WISP3 437/437
(100 %)
0 diff
(100 %id)
DB443280.
matches multiple genes
testis .a 214 to 673 1 to 460     also hits gene WISP3 460/460
(100 %)
5 diff
(99.0 %id)
DB453552.
matches multiple genes
testis .a 226 to 712 1 to 487     also hits gene WISP3 487/487
(100 %)
2 diff
(99.6 %id)
DB457530.
matches multiple genes
testis .a 232 to 748 1 to 517     also hits gene WISP3 517/517
(100 %)
1 diff
(99.9 %id)
DB459015.
matches multiple genes
testis .a 218 to 691 1 to 474     also hits gene WISP3 474/474
(100 %)
1 diff
(99.8 %id)
DB477964.
matches multiple genes
hippocampus .a 242 to 740 1 to 499     also hits gene WISP3 499/499
(100 %)
2 diff
(99.6 %id)
BJ991892 hepatoblastoma .a 242 to 779 1 to 538       538/538
(100 %)
0 diff
(100 %id)
BJ991893 hepatoblastoma .a 1787 to 2307 528 to 8       521/528
(98 %)
0 diff
(100 %id)
DA593196 lung .a 238 to 811 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BJ993726.
matches multiple genes
hepatoblastoma .a 1962 to 2322 361 to 1     also hits gene SGEF 361/361
(100 %)
0 diff
(100 %id)
CD677901 eye, Trabecular meshwork .a 1579 to 2202 1 to 624       624/624
(100 %)
0 diff
(100 %id)
BP258120 heart .a 647 to 1226 1 to 581       581/581
(100 %)
7 diff
(98.8 %id)
BP260574 small intestine .a 211 to 792 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP261303 small intestine .a 211 to 797 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
H47467 liver and spleen .f 3756 to 4209 1 to 466   tiling clone,   466/469
(99 %)
17 diff
(96.4 %id)
N22140 cochlea, ear .c 468 to 732 267 to 1   fully sequenced,   267/267
(100 %)
0 diff
(100 %id)
N71516 cochlea, ear .c 187 to 529 1 to 344   fully sequenced,   344/344
(100 %)
1 diff
(99.8 %id)
N51701 multiple sclerosis lesions .a 1896 to 2353 458 to 1       458/467
(98 %)
0 diff
(100 %id)
N45583 multiple sclerosis lesions .a 975 to 1203 1 to 229       229/257
(89 %)
3 diff
(98.9 %id)
N48792 multiple sclerosis lesions .a 1572 to 2049 484 to 3       482/484
(99 %)
0 diff
(100 %id)
N64148 cochlea, ear .a 2106 to 2464 368 to 1       368/403
(91 %)
12 diff
(97.1 %id)
AA029037 uterus .a 246 to 614 1 to 373     Submitted on the opposite strand 373/492
(75 %)
9 diff
(98.2 %id)
AA099692 uterus .f 3689 to 3884 196 to 1     Submitted on the opposite strand 196/196
(100 %)
0 diff
(100 %id)
AA099693 uterus .b 21 to 361 1 to 341     Submitted on the opposite strand 341/341
(100 %)
9 diff
(97.4 %id)
AA215502 germinal center B cell .a 246 to 664 1 to 420     Submitted on the opposite strand 420/420
(100 %)
6 diff
(98.6 %id)
AA278202 germinal center B cell .a 1376 to 1730 10 to 363       354/354
(100 %)
1 diff
(99.8 %id)
AA278670 germinal center B cell .a 1967 to 2350 384 to 1       384/384
(100 %)
1 diff
(99.8 %id)
AA621052   .a 1810 to 2302 496 to 4       493/496
(99 %)
0 diff
(100 %id)
AA573234 breast .a 1649 to 2051 408 to 6       403/408
(98 %)
0 diff
(100 %id)
AA587950 colon, colon tumor RER+ .a 1958 to 2466 513 to 3       511/513
(99 %)
0 diff
(100 %id)
AA588685 colon, colon tumor .c 262 to 732 472 to 2   tiling clone,   471/479
(98 %)
3 diff
(99.4 %id)
AA768510 germinal center B cell .b 140 to 298 1 to 159     Submitted on the opposite strand 159/159
(100 %)
0 diff
(100 %id)
AA808664 germinal center B cell .j 58 to 513 1 to 456     Submitted on the opposite strand 456/456
(100 %)
2 diff
(99.6 %id)
AA923091 carcinoid, lung .f 734 to 1066 1 to 333     Submitted on the opposite strand 333/333
(100 %)
0 diff
(100 %id)
AA927014 pooled germ cell tumors .f 3705 to 3894 213 to 24   AAA   190/190
(100 %)
0 diff
(100 %id)
AA973387 carcinoid, lung .a 285 to 738 1 to 454     Submitted on the opposite strand 454/463
(98 %)
2 diff
(99.6 %id)
AA973969 carcinoid, lung .f 734 to 1185 1 to 452     Submitted on the opposite strand 452/452
(100 %)
0 diff
(100 %id)
AI733388 carcinoid, lung .f 734 to 1231 1 to 498   tiling clone, Submitted on the opposite strand 498/498
(100 %)
0 diff
(100 %id)
AI791800 carcinoid, lung .f 966 to 1474 509 to 1     Submitted on the opposite strand 509/509
(100 %)
1 diff
(99.9 %id)
AA988217 carcinoid, lung .f 734 to 1217 1 to 484     Submitted on the opposite strand 484/484
(100 %)
0 diff
(100 %id)
AI792035 carcinoid, lung .f 988 to 1477 499 to 9     Submitted on the opposite strand 491/499
(98 %)
0 diff
(100 %id)
AI820640 carcinoid, lung .f 734 to 1227 1 to 494     Submitted on the opposite strand 494/494
(100 %)
0 diff
(100 %id)
AI080061   .a 2046 to 2353 326 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 308/308
(100 %)
3 diff
(99.1 %id)
AI077404   .a 1943 to 2352 415 to 6       410/415
(98 %)
0 diff
(100 %id)
AI243385 pooled .a 1942 to 2352 411 to 1       411/411
(100 %)
0 diff
(100 %id)
AI306388 carcinoid, lung .f 742 to 1180 1 to 439     Submitted on the opposite strand 439/439
(100 %)
2 diff
(99.6 %id)
AI348285 carcinoid, lung .f 742 to 1106 1 to 365     Submitted on the opposite strand 365/365
(100 %)
0 diff
(100 %id)
AI302255 carcinoid, lung .f 66 to 555 1 to 490     Submitted on the opposite strand 490/490
(100 %)
2 diff
(99.6 %id)
AI333177 lung .a 273 to 766 1 to 494     Submitted on the opposite strand 494/494
(100 %)
0 diff
(100 %id)
AI284732 ovary, tumor, 5 pooled (see description) .a 1952 to 2356 405 to 1       405/405
(100 %)
0 diff
(100 %id)
AI267296 brain, frontal lobe (see description) .f 938 to 1283 363 to 18       346/363
(95 %)
0 diff
(100 %id)
AI805900 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 39 to 526 1 to 488     Submitted on the opposite strand 488/488
(100 %)
0 diff
(100 %id)
AI492047 B-cell, chronic lymphotic leukemia .a 273 to 738 1 to 466     Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
AI679111 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .f 4538 to 4949 419 to 8       412/419
(98 %)
0 diff
(100 %id)
AI679686 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .f 4501 to 4930 428 to 1       428/428
(100 %)
4 diff
(99.1 %id)
AI801903 carcinoid, lung .a 273 to 879 1 to 607     Submitted on the opposite strand 607/607
(100 %)
1 diff
(99.9 %id)
AI681594 carcinoid, lung .f 742 to 1084 1 to 343     Submitted on the opposite strand 343/343
(100 %)
1 diff
(99.8 %id)
AI613127 Kidney .a 1883 to 2350 468 to 1       468/468
(100 %)
0 diff
(100 %id)
AI862953 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 2086 to 2350 292 to 28   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 265/265
(100 %)
6 diff
(97.8 %id)
AI719605 aorta .a 1916 to 2359 443 to 1       443/443
(100 %)
2 diff
(99.6 %id)
AI768712 Kidney .a 288 to 815 1 to 528     Submitted on the opposite strand 528/528
(100 %)
1 diff
(99.9 %id)
AW020553 cochlea, ear .d 426 to 918 12 to 504       493/504
(97 %)
8 diff
(98.5 %id)
AW166321 cervix .a 273 to 739 1 to 467     Submitted on the opposite strand 467/467
(100 %)
2 diff
(99.6 %id)
AW294927   .a 247 to 717 1 to 471     Submitted on the opposite strand 471/471
(100 %)
0 diff
(100 %id)
AW612180 carcinoid, lung .a 4 to 225 223 to 1   tiling clone,   223/231
(96 %)
1 diff
(99.6 %id)
AW614506 carcinoid, lung .a 273 to 716 1 to 446     Submitted on the opposite strand 446/446
(100 %)
2 diff
(99.6 %id)
AW661722 pooled .a 1580 to 2051 474 to 1       474/474
(100 %)
2 diff
(99.6 %id)
AW771142 colon, juvenile granulosa tumor .f 1129 to 1534 406 to 1   tiling clone,   406/406
(100 %)
0 diff
(100 %id)
AW772236 Kidney .a 246 to 739 1 to 494     Submitted on the opposite strand 494/494
(100 %)
8 diff
(98.4 %id)
BE221549 malignant melanoma, metastatic to lymphnode, skin .a 1913 to 2350 438 to 1       438/438
(100 %)
0 diff
(100 %id)
BE218334 carcinoid, lung .a 255 to 874 1 to 619     Submitted on the opposite strand 619/619
(100 %)
7 diff
(98.9 %id)
BE327583 carcinoid, lung .a 496 to 706 1 to 211     Submitted on the opposite strand 211/211
(100 %)
3 diff
(98.6 %id)
BE550254 carcinoid, lung .f 743 to 1248 1 to 506     Submitted on the opposite strand 506/506
(100 %)
0 diff
(100 %id)
CB047232 Kidney .a 1783 to 2353 598 to 28   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 571/582
(98 %)
1 diff
(99.9 %id)
BG149186 carcinoid, lung .a 278 to 461 1 to 185     Submitted on the opposite strand 185/185
(100 %)
1 diff
(99.5 %id)
BF431228 Kidney .a 1391 to 2049 659 to 1       659/659
(100 %)
9 diff
(98.7 %id)
BF941623 carcinoid, lung .a 245 to 672 1 to 427     Submitted on the opposite strand 427/427
(100 %)
2 diff
(99.6 %id)
BG108376 Bone, osteosarcoma, cell line .a 962 to 1750 1 to 789       789/793
(99 %)
6 diff
(99.3 %id)
BG025996 Bone, osteosarcoma, cell line .k-u 1 to 760 1 to 762 exact tiling clone,   762/1055
(72 %)
23 diff
(97.9 %id)
BG253224 adenocarcinoma, cell line, Liver .a 809 to 1517 1 to 710       710/1008
(70 %)
7 diff
(99.4 %id)
BG719842 testis .a 249 to 960 1 to 711       711/711
(100 %)
9 diff
(98.8 %id)
BG720502 testis .a 210 to 913 1 to 707       707/1056
(66 %)
12 diff
(98.9 %id)
BG720807 testis .a 266 to 967 1 to 704       704/704
(100 %)
6 diff
(99.2 %id)
BG720592 testis .a 237 to 973 1 to 739       739/739
(100 %)
8 diff
(99.0 %id)
BG720243 testis .a 218 to 803 1 to 586       586/586
(100 %)
2 diff
(99.7 %id)
BG717990 testis .a 221 to 881 1 to 662       662/662
(100 %)
6 diff
(99.1 %id)
BG771631 testis .a 336 to 1144 1 to 801       803/804
(99 %)
22 diff
(97.3 %id)
BI335490 cervical carcinoma cell line, cervix .f 4247 to 4939 1 to 685       685/685
(100 %)
12 diff
(98.3 %id)
BI520862 brain, medulla .d 301 to 1197 916 to 4 L3V H17Q P25L Y27V T28Y ...     913/917
(99 %)
16 diff
(98.3 %id)
BI519962 brain, medulla .a 956 to 1840 1 to 886       886/886
(100 %)
29 diff
(96.8 %id)
BI826304 brain, medulla .a 253 to 1119 1 to 860       860/863
(99 %)
8 diff
(99.1 %id)
BI825856 brain, medulla .a 538 to 1302 1 to 763       763/763
(100 %)
8 diff
(99.0 %id)
BI818396 pooled brain, lung, testis .a 1350 to 2071 1 to 716       716/716
(100 %)
7 diff
(99.1 %id)
BI818536 pooled brain, lung, testis .a 1350 to 2254 1 to 905       905/908
(99 %)
21 diff
(97.7 %id)
BI911994 leukocyte .a 253 to 961 35 to 748       711/748
(95 %)
14 diff
(98.2 %id)
BI918565 brain .a 263 to 986 20 to 742       723/743
(97 %)
10 diff
(98.7 %id)
BI462904 testis .a 237 to 922 1 to 688       688/769
(89 %)
15 diff
(98.1 %id)
BI460971 testis .a 237 to 966 1 to 730       730/730
(100 %)
5 diff
(99.4 %id)
BI465328 testis .a 240 to 907 1 to 669       669/670
(99 %)
32 diff
(95.3 %id)
BI598046 brain, hypothalamus .f 30 to 838 1 to 814 Q33K     814/986
(82 %)
37 diff
(96.3 %id)
BI670200 brain, hypothalamus .f 30 to 805 1 to 771 Q33K A157C C158L N159*     771/980
(78 %)
25 diff
(97.5 %id)
BM459782 leiomyosarcoma, uterus .a 650 to 1237 13 to 601       589/996
(59 %)
10 diff
(99.0 %id)
CK824688 Pancreas, Purified pancreatic islet .a 1452 to 2063 1 to 611     Submitted on the opposite strand 611/611
(100 %)
1 diff
(99.9 %id)
BM923567 pooled colon, kidney, stomach .a 269 to 377 122 to 14     Submitted on the opposite strand 109/122
(89 %)
0 diff
(100 %id)
BM993039 lung, Metastatic Chondrosarcoma .f 727 to 1198 1 to 472     Submitted on the opposite strand 472/472
(100 %)
5 diff
(99.0 %id)
BM998898 lung, Lung Focal Fibrosis .a 1662 to 2350 707 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 689/689
(100 %)
2 diff
(99.8 %id)
BQ231871 large cell carcinoma, lung .a 314 to 833 32 to 552       521/1048
(49 %)
12 diff
(98.9 %id)
BU597650 mixed (pool of 40 RNAs) .a 220 to 925 1 to 714       714/851
(83 %)
15 diff
(98.3 %id)
BU568964 testis .a 1250 to 2037 1 to 792       792/792
(100 %)
13 diff
(98.4 %id)
CD104317 Pooled-Skin .l-u 69 to 703 1 to 641 exact tiling clone,   641/684
(93 %)
14 diff
(98.0 %id)
CD359097 testis .l-u 1 to 724 31 to 759 P2L D48V tiling clone, AAA   729/923
(78 %)
19 diff
(98.0 %id)
CD644532 Embryonic Stem cells .d 111 to 960 5 to 846 Y140X K141Q E157R C159X L167X ...     842/862
(97 %)
17 diff
(98.1 %id)
TI_57196313   .a 1350 to 2071 34 to 749       716/749
(95 %)
13 diff
(98.3 %id)
TI_57196430   .a 1350 to 2254 37 to 941       905/944
(95 %)
27 diff
(97.2 %id)
TI_57234272   .a 253 to 961 35 to 748       711/748
(95 %)
14 diff
(98.2 %id)
TI_43963245   .d 301 to 1197 916 to 4 L3V H17Q P25L Y27V T28Y ...     913/917
(99 %)
16 diff
(98.3 %id)
TI_43963985   .a 953 to 1840 56 to 944       889/944
(94 %)
30 diff
(96.9 %id)
TI_57173392   .a 248 to 1119 25 to 889       865/892
(96 %)
14 diff
(98.5 %id)
TI_57173922   .a 537 to 1302 65 to 835       778/835
(93 %)
14 diff
(98.4 %id)
TI_57238407   .a 263 to 986 20 to 742       723/743
(97 %)
10 diff
(98.7 %id)
TI_45213309   .f 29 to 838 121 to 935 Q33K     815/1107
(73 %)
37 diff
(96.7 %id)
TI_44344902   .f 29 to 805 85 to 856 Q33K A157C C158L N159* AAA   772/1054
(73 %)
25 diff
(97.7 %id)
BP280424   .h 1 to 548 1 to 549   tiling clone,   549/550
(99 %)
16 diff
(97.1 %id)
CB153775 Liver .a 687 to 1233 1 to 547       547/547
(100 %)
0 diff
(100 %id)
CB156879 Liver .d 1 to 559 1 to 558   tiling clone,   558/558
(100 %)
1 diff
(99.9 %id)
CB163568 Liver .a 1366 to 1989 624 to 1     Submitted on the opposite strand 624/624
(100 %)
0 diff
(100 %id)
NM_016262.4   .a 176 to 2471 1 to 2296 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 2296/2296
(100 %)
0 diff
(100 %id)
BP308405 brain .b 1 to 582 1 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
DA753603   .a 243 to 806 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BM759229 Ascites, stomach .a 1090 to 1197 1 to 109       109/109
(100 %)
1 diff
(99.1 %id)
BM752225 Ascites, stomach .a 242 to 772 1 to 530       530/530
(100 %)
2 diff
(99.7 %id)
BM783153 stomach .a 1914 to 2350 1 to 437   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 437/437
(100 %)
1 diff
(99.8 %id)
TI_1948132027   .a 289 to 1059 122 to 889       768/1303
(58 %)
43 diff
(96.7 %id)
TI_1948132028   .a 289 to 1100 136 to 963       828/1251
(66 %)
32 diff
(97.5 %id)
TI_1948132029   .a 926 to 1721 922 to 119       804/1470
(54 %)
13 diff
(99.2 %id)
TI_1948132030   .a 926 to 1721 922 to 124       799/1364
(58 %)
17 diff
(98.8 %id)
TI_1948132031   .a 289 to 1098 121 to 927       805/1402
(57 %)
35 diff
(97.6 %id)
TI_1948132032   .a 289 to 1186 133 to 1040       908/1209
(75 %)
34 diff
(97.2 %id)
TI_1948132033   .a 928 to 1721 913 to 118       796/1390
(57 %)
8 diff
(99.5 %id)
TI_1948132034   .a 926 to 1721 922 to 124       799/1404
(56 %)
15 diff
(99.0 %id)
TI_1948132351   .a 289 to 1101 124 to 936       813/1417
(57 %)
20 diff
(98.6 %id)
TI_1948132352   .a 289 to 1107 139 to 973       835/1255
(66 %)
34 diff
(97.3 %id)
TI_1948132353   .a 923 to 1721 925 to 119       807/1367
(59 %)
19 diff
(98.7 %id)
TI_1948132354   .a 1027 to 1721 819 to 123       697/1350
(51 %)
15 diff
(98.9 %id)
TI_1948132355   .a 289 to 1242 125 to 1084       958/1416
(67 %)
26 diff
(98.2 %id)
TI_1948132356   .a 289 to 1134 134 to 989       856/1235
(69 %)
30 diff
(97.6 %id)
TI_1948132357   .a 854 to 1721 996 to 119       878/1367
(64 %)
13 diff
(99.1 %id)
TI_1948132358   .a 923 to 1721 920 to 123       798/1307
(61 %)
32 diff
(97.6 %id)
TI_1948132662   .a 289 to 913 118 to 742       625/1453
(43 %)
40 diff
(97.3 %id)
TI_1948132663   .a 289 to 1101 134 to 950       817/1217
(67 %)
17 diff
(98.7 %id)
TI_1948132664   .a 781 to 1721 1055 to 118       938/1350
(69 %)
38 diff
(97.2 %id)
TI_1948132666   .a 289 to 1184 120 to 1015       896/1388
(64 %)
40 diff
(97.2 %id)
TI_1948132667   .a 289 to 1101 136 to 952       817/1199
(68 %)
14 diff
(98.9 %id)
TI_1948132668   .a 928 to 1721 915 to 118       798/1350
(59 %)
14 diff
(99.0 %id)
TI_1948132669   .a 1007 to 1721 843 to 124       718/1284
(55 %)
28 diff
(97.9 %id)
TI_1948132971   .a 289 to 1107 121 to 942       822/1392
(59 %)
30 diff
(97.9 %id)
TI_1948132972   .a 289 to 1101 135 to 947       813/1183
(68 %)
11 diff
(99.1 %id)
TI_1948132973   .a 736 to 1721 1103 to 119       985/1343
(73 %)
43 diff
(96.8 %id)
TI_1948132974   .a 932 to 1721 919 to 122       798/1386
(57 %)
29 diff
(98.0 %id)
TI_1948132975   .a 289 to 1101 124 to 935       812/1371
(59 %)
19 diff
(98.7 %id)
TI_1948132976   .a 289 to 1098 134 to 947       814/1218
(66 %)
24 diff
(98.1 %id)
TI_1948132977   .a 926 to 1716 915 to 122       794/1358
(58 %)
7 diff
(99.5 %id)
TI_1948132978   .a 928 to 1716 918 to 128       791/1290
(61 %)
26 diff
(98.0 %id)
DN998573 bone marrow .a 234 to 972 1 to 739       739/739
(100 %)
5 diff
(99.4 %id)
DB006814 cervix, tumor tissue .a 243 to 646 2 to 405   capped   404/404
(100 %)
0 diff
(100 %id)
DB015310 esophageal, tumor tissue .a 227 to 784 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB028614 testis .a 219 to 807 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
DB029357 testis .a 238 to 834 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DB031448 testis .a 246 to 860 2 to 616   capped   615/615
(100 %)
1 diff
(99.9 %id)
DB036569 testis .a 177 to 744 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB045212 testis .a 238 to 805 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB052578 testis .a 227 to 792 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB053346 testis .a 246 to 800 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB055194 testis .a 243 to 805 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB056041 testis .a 219 to 778 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB131447 thymus .f 1470 to 2021 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
DB344631 thymus .f 4514 to 5078 565 to 1       565/565
(100 %)
0 diff
(100 %id)
DB159765 thymus .m-u 1 to 583 2 to 585 R16* tiling clone, capped   584/584
(100 %)
2 diff
(99.7 %id)
DB172335 kidney, tumor tissue .f 29 to 597 2 to 570 E27* capped   569/569
(100 %)
3 diff
(99.5 %id)
DB231838 trachea .i 32 to 612 2 to 582 exact tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
BP374187 umbilical cord .a 211 to 789 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
CA411886 Chondrosarcoma Grade II, Left Pelvis .a 1795 to 2471 695 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 677/677
(100 %)
2 diff
(99.8 %id)
TI_151703000   .a 246 to 1097 56 to 902     Submitted on the opposite strand 847/1280
(66 %)
49 diff
(96.2 %id)
TI_153984976   .a 1428 to 2353 1010 to 96   AAA Submitted on the opposite strand 915/965
(94 %)
9 diff
(99.1 %id)
TI_151797339   .a 244 to 840 171 to 763       593/696
(85 %)
23 diff
(96.7 %id)
DB255091 uterus .a 211 to 791 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB270554 uterus .a 227 to 762 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BP376621 uterus .a 197 to 778 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BM503814 Pancreas, Purified pancreatic islet .a 1366 to 1989 624 to 1       624/624
(100 %)
0 diff
(100 %id)
BM509957 Pancreas, Purified pancreatic islet .a 176 to 2471 1 to 2296   RefSeq,   2296/2296
(100 %)
0 diff
(100 %id)
DA148921 amygdala .b 1 to 582 1 to 582   tiling clone, capped This clone was ignored 582/582
(100 %)
0 diff
(100 %id)
DB301614 amygdala .a 243 to 806 2 to 565     This clone was ignored 564/564
(100 %)
0 diff
(100 %id)
AL597231   .a 1090 to 1197 1 to 109       109/109
(100 %)
1 diff
(99.1 %id)
AV694337 hepatocellular carcinoma .a 1090 to 1197 1 to 109     This clone was ignored 109/109
(100 %)
1 diff
(99.1 %id)
AV696364 hepatocellular carcinoma .a 242 to 772 1 to 530     This clone was ignored 530/530
(100 %)
2 diff
(99.7 %id)
AV658536 corresponding non cancerous liver tissue .a 242 to 772 1 to 530     Submitted on the opposite strand 530/530
(100 %)
2 diff
(99.7 %id)
AV660654 corresponding non cancerous liver tissue .a 1914 to 2350 1 to 437     Submitted on the opposite strand 437/437
(100 %)
1 diff
(99.8 %id)
BG723551 testis .a 289 to 1059 122 to 889     This clone was ignored 768/1303
(58 %)
43 diff
(96.7 %id)
DB080858 testis .a 289 to 1100 136 to 963   capped   828/1251
(66 %)
32 diff
(97.5 %id)
DB340822 testis .a 926 to 1721 922 to 119       804/1470
(54 %)
13 diff
(99.2 %id)
TI_1948132030   .a 926 to 1721 922 to 124       799/1364
(58 %)
17 diff
(98.8 %id)
TI_1948132031   .a 289 to 1098 121 to 927       805/1402
(57 %)
35 diff
(97.6 %id)
TI_1948132032   .a 289 to 1186 133 to 1040       908/1209
(75 %)
34 diff
(97.2 %id)
TI_1948132033   .a 928 to 1721 913 to 118       796/1390
(57 %)
8 diff
(99.5 %id)
TI_1948132034   .a 926 to 1721 922 to 124       799/1404
(56 %)
15 diff
(99.0 %id)
TI_1948132351   .a 289 to 1101 124 to 936       813/1417
(57 %)
20 diff
(98.6 %id)
TI_1948132352   .a 289 to 1107 139 to 973       835/1255
(66 %)
34 diff
(97.3 %id)
TI_1948132353   .a 923 to 1721 925 to 119       807/1367
(59 %)
19 diff
(98.7 %id)
TI_1948132354   .a 1027 to 1721 819 to 123       697/1350
(51 %)
15 diff
(98.9 %id)
TI_1948132355   .a 289 to 1242 125 to 1084       958/1416
(67 %)
26 diff
(98.2 %id)
TI_1948132356   .a 289 to 1134 134 to 989       856/1235
(69 %)
30 diff
(97.6 %id)
TI_1948132357   .a 854 to 1721 996 to 119       878/1367
(64 %)
13 diff
(99.1 %id)
TI_1948132358   .a 923 to 1721 920 to 123       798/1307
(61 %)
32 diff
(97.6 %id)
TI_1948132662   .a 289 to 913 118 to 742       625/1453
(43 %)
40 diff
(97.3 %id)
TI_1948132663   .a 289 to 1101 134 to 950       817/1217
(67 %)
17 diff
(98.7 %id)
TI_1948132664   .a 781 to 1721 1055 to 118       938/1350
(69 %)
38 diff
(97.2 %id)
TI_1948132666   .a 289 to 1184 120 to 1015       896/1388
(64 %)
40 diff
(97.2 %id)
TI_1948132667   .a 289 to 1101 136 to 952       817/1199
(68 %)
14 diff
(98.9 %id)
TI_1948132668   .a 928 to 1721 915 to 118       798/1350
(59 %)
14 diff
(99.0 %id)
TI_1948132669   .a 1007 to 1721 843 to 124       718/1284
(55 %)
28 diff
(97.9 %id)
TI_1948132971   .a 289 to 1107 121 to 942       822/1392
(59 %)
30 diff
(97.9 %id)
TI_1948132972   .a 289 to 1101 135 to 947       813/1183
(68 %)
11 diff
(99.1 %id)
TI_1948132973   .a 736 to 1721 1103 to 119       985/1343
(73 %)
43 diff
(96.8 %id)
TI_1948132974   .a 932 to 1721 919 to 122       798/1386
(57 %)
29 diff
(98.0 %id)
TI_1948132975   .a 289 to 1101 124 to 935       812/1371
(59 %)
19 diff
(98.7 %id)
TI_1948132976   .a 289 to 1098 134 to 947       814/1218
(66 %)
24 diff
(98.1 %id)
TI_1948132977   .a 926 to 1716 915 to 122       794/1358
(58 %)
7 diff
(99.5 %id)
TI_1948132978   .a 928 to 1716 918 to 128       791/1290
(61 %)
26 diff
(98.0 %id)
DN998573 bone marrow .a 234 to 972 1 to 739       739/739
(100 %)
5 diff
(99.4 %id)
DB006814 cervix, tumor tissue .a 243 to 646 2 to 405   capped   404/404
(100 %)
0 diff
(100 %id)
DB015310 esophageal, tumor tissue .a 227 to 784 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB028614 testis .a 219 to 807 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
DB029357 testis .a 238 to 834 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DB031448 testis .a 246 to 860 2 to 616   capped   615/615
(100 %)
1 diff
(99.9 %id)
DB036569 testis .a 177 to 744 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB045212 testis .a 238 to 805 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB052578 testis .a 227 to 792 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB053346 testis .a 246 to 800 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB055194 testis .a 243 to 805 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB056041 testis .a 219 to 778 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB131447 thymus .f 1470 to 2021 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
DB344631 thymus .f 4514 to 5078 565 to 1       565/565
(100 %)
0 diff
(100 %id)
DB159765 thymus .m-u 1 to 583 2 to 585 R16* tiling clone, capped   584/584
(100 %)
2 diff
(99.7 %id)
DB172335 kidney, tumor tissue .f 29 to 597 2 to 570 E27* capped   569/569
(100 %)
3 diff
(99.5 %id)
DB231838 trachea .i 32 to 612 2 to 582 exact tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
BP374187 umbilical cord .a 211 to 789 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
CA411886 Chondrosarcoma Grade II, Left Pelvis .a 1795 to 2471 695 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 677/677
(100 %)
2 diff
(99.8 %id)
CA411886 Chondrosarcoma Grade II, Left Pelvis .a 1795 to 2471 695 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 677/677
(100 %)
2 diff
(99.8 %id)
TI_151703000   .a 246 to 1097 56 to 902     Submitted on the opposite strand 847/1280
(66 %)
49 diff
(96.2 %id)
TI_153984976   .a 1428 to 2353 1010 to 96   AAA Submitted on the opposite strand 915/965
(94 %)
9 diff
(99.1 %id)
TI_151797339   .a 244 to 840 171 to 763       593/696
(85 %)
23 diff
(96.7 %id)
DB255091 uterus .a 211 to 791 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB270554 uterus .a 227 to 762 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BP376621 uterus .a 197 to 778 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l-u, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C