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Gene TTC14TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
370 supporting clones for gene TTC14 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
C14956   .d 4120 to 4496 1 to 377       377/377
(100 %)
0 diff
(100 %id)
AJ223810.
matches multiple genes
  .d 2752 to 3388 1 to 647     also hits gene TNFRSF12A 647/654
(98 %)
17 diff
(97.5 %id)
AA328433   .d 2244 to 2559 1 to 316       316/316
(100 %)
2 diff
(99.4 %id)
AA329501   .b 1463 to 1628 1 to 166       166/166
(100 %)
0 diff
(100 %id)
AA334850   .b 991 to 1299 1 to 309       309/309
(100 %)
0 diff
(100 %id)
AA363131 ovary .d 3185 to 3564 9 to 394       386/403
(95 %)
7 diff
(98.3 %id)
AB075860 brain .a 463 to 2881 1 to 2419   available from KIAA,   2419/2419
(100 %)
0 diff
(100 %id)
AK055984   .a 43 to 2874 1 to 2832   tiling clone, available from FLJ,   2832/2832
(100 %)
3 diff
(99.9 %id)
AK074095 Spleen .c 7 to 3151 1 to 3145 exact tiling clone, available from FLJ,   3145/5692
(55 %)
1 diff
(100.0 %id)
AL832052 bone marrow .d 64 to 4629 1 to 4567 E124G tiling clone, available from DKFZ, AAA   4567/4567
(100 %)
5 diff
(99.9 %id)
AL832310 lymph node .d 3392 to 4629 1 to 1238   available from DKFZ, AAA   1238/1238
(100 %)
0 diff
(100 %id)
AL833086 human spinal cord .d 65 to 4637 1 to 4572 exact tiling clone, available from DKFZ, AAA   4572/4572
(100 %)
7 diff
(99.9 %id)
AL833103 human bone marrow .c 1 to 1884 1 to 1884 exact tiling clone, available from DKFZ, AAA   1884/1884
(100 %)
1 diff
(100.0 %id)
DA024634   .d 57 to 642 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA027530   .d 67 to 608 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
AW361102 colon .b 761 to 995 238 to 3       236/238
(99 %)
9 diff
(96.3 %id)
AW377452 colon .b 628 to 1092 1 to 465       465/465
(100 %)
1 diff
(99.8 %id)
AW379077 head_neck .d 1911 to 2184 272 to 2       271/272
(99 %)
0 diff
(100 %id)
AW853097 colon .b 755 to 1164 59 to 469       411/476
(86 %)
8 diff
(98.4 %id)
AW958143   .d 1073 to 1631 1 to 555       555/556
(99 %)
12 diff
(97.9 %id)
AW962487   .d 3299 to 3736 1 to 436       436/439
(99 %)
16 diff
(96.4 %id)
AW965522   .d 1073 to 1648 1 to 576       576/576
(100 %)
24 diff
(95.9 %id)
AY358762   .b 1 to 2275 1 to 2275 exact tiling clone,   2275/2275
(100 %)
2 diff
(100.0 %id)
BC027990 Placenta, choriocarcinoma .a 79 to 2874 12 to 2807   tiling clone, available from MGC, AAA   2796/2796
(100 %)
0 diff
(100 %id)
BE000961 breast_normal .k 665 to 917 268 to 17     Submitted on the opposite strand 252/282
(89 %)
0 diff
(100 %id)
BE080122 breast .d 3710 to 4400 1 to 685       685/726
(94 %)
12 diff
(98.4 %id)
BF857215 prostate_tumor .b 1916 to 2168 13 to 265       253/270
(93 %)
4 diff
(98.6 %id)
BF857221 prostate_tumor .b 1916 to 2168 12 to 264       253/269
(94 %)
6 diff
(97.8 %id)
BF893725 marrow .b 188 to 782 596 to 1     Submitted on the opposite strand 596/602
(99 %)
5 diff
(99.2 %id)
BF904374 marrow .d 1550 to 1907 362 to 3     Submitted on the opposite strand 360/363
(99 %)
0 diff
(100 %id)
BM873810   .d 2668 to 3092 425 to 1     Submitted on the opposite strand 425/425
(100 %)
1 diff
(99.8 %id)
BM874237   .d 2066 to 2592 1 to 527     Submitted on the opposite strand 527/527
(100 %)
1 diff
(99.9 %id)
BQ302793 breast .d 3759 to 4129 1 to 377       377/377
(100 %)
27 diff
(92.9 %id)
DA075065 cerebellum .d 1325 to 1900 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA093627 cerebellum .d 69 to 640 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA100722 cerebellum .d 75 to 641 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA108654 cerebellum .d 45 to 631 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA138102 alzheimer cortex .d 2734 to 3276 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DB301209 alzheimer cortex .d 4126 to 4633 508 to 1       508/508
(100 %)
0 diff
(100 %id)
DA189284 amygdala .d 50 to 626 2 to 578   capped   577/578
(99 %)
6 diff
(99.0 %id)
DA190985 amygdala .d 50 to 627 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA217132 brain .b 12 to 543 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA221043 brain .b 12 to 562 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA224290 brain .k 700 to 1168 2 to 471   capped   470/470
(100 %)
2 diff
(99.6 %id)
DB305130 brain .k 6547 to 7082 536 to 1   tiling clone,   536/536
(100 %)
0 diff
(100 %id)
DA224942 brain .d 36 to 697 2 to 664   capped   663/663
(100 %)
1 diff
(99.9 %id)
DA225338 brain .b 709 to 1280 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA226117 brain .d 75 to 630 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA238068 brain .d 71 to 655 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA241770 brain .d 36 to 635 2 to 601   capped   600/600
(100 %)
1 diff
(99.9 %id)
DA243196 brain .k 1 to 591 6 to 596   tiling clone, capped   595/595
(100 %)
1 diff
(99.9 %id)
DA249714 brain .d 45 to 618 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA283533 corpus callosum .d 80 to 626 2 to 549   capped   548/552
(99 %)
6 diff
(99.0 %id)
DA283647 corpus callosum .d 16 to 600 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA303451 hippocampus .o-u 348 to 934 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
DA309928 hippocampus .o-u 165 to 737 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA311728 hippocampus .d 73 to 635 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA318120 hippocampus .d 71 to 577 2 to 508   capped   507/507
(100 %)
0 diff
(100 %id)
DA318269 hippocampus .d 71 to 563 2 to 496   capped   495/495
(100 %)
2 diff
(99.6 %id)
DA319061 hippocampus .d 45 to 598 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA324138 hippocampus .d 48 to 585 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA353345 substantia nigra .o-u 193 to 771 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA400595 thalamus .d 71 to 615 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA402999 thalamus .d 49 to 634 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA409562 thalamus .d 71 to 621 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA412181 thalamus .d 66 to 638 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA417000 thalamus .d 941 to 1508 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA417683 thalamus .d 71 to 637 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BU198539   .d 3340 to 3955 1 to 616       616/617
(99 %)
3 diff
(99.6 %id)
BX105010 heart .d 3608 to 4168 1 to 560   AAA   560/560
(100 %)
1 diff
(99.9 %id)
BX117512 liver and spleen .o-u 1794 to 2149 1 to 355       355/355
(100 %)
1 diff
(99.8 %id)
BX648669 human amygdala .k 28 to 7076 1 to 7049 exact tiling clone, available from DKFZ, AAA   7049/7049
(100 %)
5 diff
(100.0 %id)
T19417   .d 4442 to 4636 1 to 195       195/195
(100 %)
0 diff
(100 %id)
CA405596 adipose .d 1179 to 1761 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
CD685538 normal nasopharynx .d 2179 to 2664 24 to 511       488/511
(95 %)
7 diff
(98.7 %id)
CD696200 normal nasopharynx .d 2179 to 2718 22 to 560       539/560
(96 %)
8 diff
(98.6 %id)
CN274925 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .o-u 2183 to 2771 8 to 596 exact AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 589/596
(98 %)
8 diff
(98.7 %id)
CN370705 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 1552 to 2062 1 to 509       509/509
(100 %)
11 diff
(97.9 %id)
CN370706 embryonic stem cells, cell lines H1, H7, andH9 .d 1470 to 1815 1 to 343       343/343
(100 %)
7 diff
(98.0 %id)
CN417937 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 48 to 724 12 to 690       679/690
(98 %)
8 diff
(98.9 %id)
CN417938 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 73 to 834 1 to 762       762/762
(100 %)
4 diff
(99.5 %id)
CN417939 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 18 to 709 1 to 694       694/694
(100 %)
2 diff
(99.8 %id)
CN420722 embryonic stem cells, DMSO-treated H9 cellline .i 55 to 638 9 to 594 H183P G184R tiling clone,   586/594
(98 %)
8 diff
(98.7 %id)
CN420723 embryonic stem cells, DMSO-treated H9 cellline .a 1499 to 2205 1 to 707       707/707
(100 %)
0 diff
(100 %id)
CN420724 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 1960 to 2358 1 to 398       398/398
(100 %)
3 diff
(99.3 %id)
CN420725 embryonic stem cells, DMSO-treated H9 cellline .b 20 to 327 1 to 308       308/308
(100 %)
1 diff
(99.7 %id)
CR590377 fetal brain .d 2102 to 2905 804 to 1     Submitted on the opposite strand 804/804
(100 %)
0 diff
(100 %id)
CR623166 fetal brain .d 1566 to 4599 1 to 3034   tiling clone,   3034/3034
(100 %)
0 diff
(100 %id)
CR741655 melanocyte .d 1788 to 2541 1 to 753   AAA   753/753
(100 %)
1 diff
(99.9 %id)
AL536144 brain, fetal brain .d 3987 to 4583 598 to 1       598/681
(87 %)
20 diff
(97.1 %id)
AL536145 brain, fetal brain .d 76 to 1058 1 to 974       974/974
(100 %)
19 diff
(98.1 %id)
BX431628 brain, fetal brain .d 872 to 1705 1 to 853       853/1041
(81 %)
42 diff
(96.0 %id)
AL538899 brain, fetal brain .d 1566 to 2452 1 to 887       887/894
(99 %)
11 diff
(98.8 %id)
AL567546 brain, fetal brain .d 3662 to 4143 943 to 460       484/485
(99 %)
0 diff
(100 %id)
BX433244 brain, fetal brain .d 2932 to 3847 911 to 1       911/913
(99 %)
12 diff
(98.7 %id)
BX451708 brain, fetal brain .d 2345 to 3280 1 to 930       930/930
(100 %)
40 diff
(95.7 %id)
AL536709 brain, fetal brain .d 2102 to 2904 1 to 805     Submitted on the opposite strand 805/805
(100 %)
9 diff
(98.9 %id)
AL536710 brain, fetal brain .d 2053 to 2905 853 to 1     Submitted on the opposite strand 853/853
(100 %)
0 diff
(100 %id)
CA397282 eye, RPE/choroid .d 1803 to 2423 1 to 621       621/621
(100 %)
0 diff
(100 %id)
DA456061 tongue, tumor tissue .b 12 to 563 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA460149 tongue, tumor tissue .d 82 to 651 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA461973 tongue, tumor tissue .d 82 to 552 2 to 471   capped   470/470
(100 %)
4 diff
(99.2 %id)
CV030410 mixed .b 53 to 692 1 to 640       640/640
(100 %)
0 diff
(100 %id)
AL691761   .d 64 to 597 1 to 534       534/534
(100 %)
0 diff
(100 %id)
AL040340 testis .d 3042 to 3495 1 to 454       454/454
(100 %)
0 diff
(100 %id)
AL040341 testis .d 3753 to 4619 867 to 1       867/867
(100 %)
0 diff
(100 %id)
BX509724   .d 34 to 766 1 to 734       734/734
(100 %)
2 diff
(99.8 %id)
AL703410 human skeletal muscle .d 2343 to 2993 1 to 651       651/651
(100 %)
2 diff
(99.7 %id)
BX489610   .d 64 to 799 1 to 736       736/736
(100 %)
3 diff
(99.6 %id)
AL697686 human skeletal muscle .d 4087 to 4636 1 to 551   AAA   551/551
(100 %)
2 diff
(99.7 %id)
AL707380 human skeletal muscle .d 57 to 700 1 to 645       645/650
(99 %)
6 diff
(99.1 %id)
AL707381 human skeletal muscle .d 57 to 656 1 to 600       600/600
(100 %)
3 diff
(99.5 %id)
BX474122   .d 1 to 489 1 to 489   tiling clone,   489/492
(99 %)
2 diff
(99.6 %id)
AL711898 human skeletal muscle .d 43 to 517 1 to 475       475/475
(100 %)
1 diff
(99.8 %id)
BX485352   .d 61 to 690 10 to 639       630/639
(98 %)
7 diff
(99.0 %id)
BX510073   .j 1 to 596 7 to 601 exact tiling clone,   601/601
(100 %)
2 diff
(99.7 %id)
BX509401   .d 64 to 636 1 to 573       573/573
(100 %)
4 diff
(99.4 %id)
BX504546   .d 1455 to 2073 1 to 619       619/619
(100 %)
1 diff
(99.9 %id)
BX953884   .d 35 to 491 1 to 455       455/455
(100 %)
4 diff
(99.2 %id)
BX492607   .d 93 to 589 1 to 497       497/497
(100 %)
1 diff
(99.8 %id)
BX955846   .d 43 to 488 1 to 446       446/446
(100 %)
2 diff
(99.6 %id)
BX492944   .d 35 to 488 1 to 454       454/454
(100 %)
1 diff
(99.8 %id)
BX954235   .d 64 to 757 1 to 696       696/696
(100 %)
4 diff
(99.5 %id)
BX644174   .d 77 to 562 1 to 486       486/486
(100 %)
1 diff
(99.8 %id)
BX645869   .d 70 to 529 1 to 460       460/460
(100 %)
1 diff
(99.8 %id)
BX954291   .d 57 to 753 1 to 697       697/697
(100 %)
1 diff
(99.9 %id)
DN912525   .b 554 to 861 1 to 308       308/308
(100 %)
2 diff
(99.4 %id)
DN913443   .d 1782 to 2083 334 to 38       297/334
(88 %)
0 diff
(100 %id)
DN915010   .d 1600 to 2078 475 to 1       475/475
(100 %)
4 diff
(99.2 %id)
DN915011   .d 1600 to 2056 1 to 454       454/454
(100 %)
3 diff
(99.4 %id)
DN916236   .d 1468 to 2078 609 to 1       609/609
(100 %)
2 diff
(99.7 %id)
DN916237   .b 812 to 1196 1 to 386       386/386
(100 %)
5 diff
(98.8 %id)
DN920531   .d 1716 to 1786 1 to 71       71/71
(100 %)
0 diff
(100 %id)
DW465971 Liver .d 59 to 401 12 to 354       343/354
(96 %)
6 diff
(98.4 %id)
DA492637 brain .d 49 to 565 2 to 520   capped   519/519
(100 %)
3 diff
(99.5 %id)
DA527627 brain .d 29 to 577 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA529415 brain .d 71 to 670 2 to 602   capped   601/601
(100 %)
1 diff
(99.9 %id)
AV718084 hypothalamus .d 1861 to 2551 1 to 691       691/701
(98 %)
7 diff
(99.1 %id)
FN046300 breast carcinoma .d 1856 to 1950 94 to 1     Submitted on the opposite strand 94/94
(100 %)
1 diff
(99.0 %id)
FN055303 breast carcinoma .o-u 858 to 950 1 to 93       93/94
(98 %)
3 diff
(96.9 %id)
FN073504 breast carcinoma .d 3592 to 3677 1 to 84       84/85
(98 %)
4 diff
(95.3 %id)
FN082251 breast carcinoma .d 3850 to 3920 1 to 68       68/68
(100 %)
3 diff
(95.6 %id)
FN098784 breast carcinoma .d 4196 to 4278 1 to 84       84/85
(98 %)
2 diff
(97.7 %id)
FN099458 breast carcinoma .d 4498 to 4576 82 to 6     Submitted on the opposite strand 77/82
(93 %)
0 diff
(100 %id)
FN104099 breast carcinoma .d 3200 to 3326 1 to 122       122/122
(100 %)
5 diff
(96.0 %id)
FN126004 breast carcinoma .b 1583 to 1655 1 to 73       73/86
(84 %)
7 diff
(91.9 %id)
FN127493 breast carcinoma .d 4233 to 4317 1 to 85       85/85
(100 %)
2 diff
(97.7 %id)
FN140568 breast carcinoma .b 1224 to 1333 1 to 111       111/112
(99 %)
8 diff
(92.9 %id)
FN142860 breast carcinoma .o-u 3142 to 3244 1 to 106       106/108
(98 %)
4 diff
(96.3 %id)
FN159316 breast carcinoma .o-u 1335 to 1434 98 to 1     Submitted on the opposite strand 98/98
(100 %)
4 diff
(96.0 %id)
FN162099 breast carcinoma .d 1928 to 2050 131 to 4     Submitted on the opposite strand 128/131
(97 %)
0 diff
(100 %id)
FN167375 breast carcinoma .d 1534 to 1643 115 to 9     Submitted on the opposite strand 107/115
(93 %)
0 diff
(100 %id)
GD136295   .d 3991 to 4168 7 to 184   AAA   178/184
(96 %)
3 diff
(98.4 %id)
GD146611   .n 284 to 375 1 to 92   AAA   92/92
(100 %)
1 diff
(99.0 %id)
GD150293   .d 3982 to 4168 1 to 186   AAA   186/186
(100 %)
2 diff
(99.0 %id)
D60384   .d 4403 to 4595 204 to 11       194/204
(95 %)
0 diff
(100 %id)
D62985   .d 4138 to 4524 1 to 387       387/387
(100 %)
4 diff
(99.0 %id)
AV682815 hepatocellular carcinoma .d 3574 to 4228 1 to 655       655/655
(100 %)
1 diff
(99.9 %id)
DB446680 testis .d 51 to 475 1 to 425       425/425
(100 %)
11 diff
(97.5 %id)
DB453543.
matches multiple genes
testis .d 68 to 560 1 to 493     also hits gene sholeybu 493/493
(100 %)
0 diff
(100 %id)
BY796907 eye .o-u 2064 to 2625 1 to 562 exact     562/562
(100 %)
0 diff
(100 %id)
DA569248 whole embryo, mainly head .d 3090 to 3831 2 to 746   capped   745/809
(92 %)
6 diff
(99.3 %id)
DB355861 whole embryo, mainly head .d 3996 to 4636 635 to 1       635/636
(99 %)
13 diff
(98.0 %id)
DA569465 whole embryo, mainly head .d 3184 to 4024 2 to 839   capped   838/838
(100 %)
7 diff
(99.2 %id)
DB356106 whole embryo, mainly head .d 4062 to 4636 573 to 1       573/580
(98 %)
13 diff
(97.8 %id)
BP421394 small intestine .d 56 to 484 1 to 430     Submitted on the opposite strand 430/430
(100 %)
6 diff
(98.7 %id)
BP422873 small intestine .d 84 to 586 1 to 503     Submitted on the opposite strand 503/503
(100 %)
0 diff
(100 %id)
BP425205 small intestine .d 2391 to 2905 515 to 1       515/515
(100 %)
0 diff
(100 %id)
BP873157 embryonal kidney .d 61 to 641 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
AV726052 hypothalamus .d 67 to 731 1 to 656       656/741
(88 %)
19 diff
(97.5 %id)
AV726352 hypothalamus .d 67 to 849 1 to 778     Suspected internal deletion 778/778
(100 %)
35 diff
(95.6 %id)
AV731023 hypothalamus .d 4263 to 4632 1 to 370       370/375
(98 %)
1 diff
(99.8 %id)
R07958 liver and spleen .o-u 3111 to 3277 173 to 7       167/173
(96 %)
0 diff
(100 %id)
R47826 breast .o-u 1721 to 2079 1 to 369       369/380
(97 %)
22 diff
(94.3 %id)
H63516 liver and spleen .o-u 2971 to 3256 289 to 2       288/291
(98 %)
0 diff
(100 %id)
H63917 liver and spleen .o-u 1795 to 2228 1 to 438       438/485
(90 %)
12 diff
(97.6 %id)
H89963 melanocyte .d 2202 to 2454 253 to 1       253/253
(100 %)
3 diff
(98.9 %id)
N22566 cochlea, ear .d 4283 to 4636 362 to 1   fully sequenced,   362/362
(100 %)
2 diff
(99.5 %id)
N75787 cochlea, ear .d 4174 to 4613 23 to 467   fully sequenced,   445/467
(95 %)
6 diff
(98.8 %id)
N30847 placenta .o-u 2362 to 2771 412 to 1   fully sequenced,   412/412
(100 %)
5 diff
(98.8 %id)
N41374 placenta .o-u 2030 to 2392 1 to 368   fully sequenced,   368/368
(100 %)
4 diff
(99.0 %id)
N26765 melanocyte .d 2198 to 2550 354 to 1       354/356
(99 %)
1 diff
(99.8 %id)
R85285 liver and spleen .o-u 1569 to 1953 397 to 7       391/397
(98 %)
0 diff
(100 %id)
N92481 lung .o-u 2241 to 2779 521 to 1 I2S K4T D5V I6M T7I ... fully sequenced,   521/521
(100 %)
10 diff
(98.1 %id)
W17166 lung .o-u 1943 to 2271 1 to 333   fully sequenced,   333/333
(100 %)
11 diff
(96.7 %id)
W73731 heart .d 3608 to 4158 1 to 548   fully sequenced, AAA   548/548
(100 %)
4 diff
(99.3 %id)
W73788 heart .d 3876 to 4168 285 to 1   fully sequenced,   285/285
(100 %)
0 diff
(100 %id)
W94082 heart .o-u 2822 to 3041 1 to 220   fully sequenced,   220/220
(100 %)
1 diff
(99.6 %id)
W94083 heart .o-u 3011 to 3280 273 to 1   fully sequenced,   273/273
(100 %)
0 diff
(100 %id)
AA703326 liver and spleen .o-u 2853 to 3290 438 to 2       437/438
(99 %)
0 diff
(100 %id)
AA159749   .d 3720 to 4093 1 to 373       373/373
(100 %)
1 diff
(99.8 %id)
AA159750   .d 4311 to 4633 334 to 12   AAA   323/323
(100 %)
1 diff
(99.7 %id)
AA164712   .d 3719 to 4168 452 to 1       452/452
(100 %)
2 diff
(99.6 %id)
AA164973   .d 3281 to 3514 85 to 318       300/318
(94 %)
3 diff
(99.1 %id)
AA259154 germinal center B cell .o-u 1607 to 1882 1 to 276       276/276
(100 %)
0 diff
(100 %id)
AA283831 germinal center B cell .d 3754 to 4024 1 to 270       270/270
(100 %)
1 diff
(99.7 %id)
AA279353 germinal center B cell .o-u 1749 to 2163 14 to 428       415/428
(96 %)
6 diff
(98.6 %id)
AA279303 germinal center B cell .o-u 2896 to 3295 404 to 1       404/404
(100 %)
4 diff
(99.1 %id)
AA284633 germinal center B cell .b 1146 to 1603 1 to 458   tiling clone, Submitted on the opposite strand 458/458
(100 %)
2 diff
(99.6 %id)
AA427620 ovarian tumor, ovary .o-u 2766 to 3279 514 to 1       514/514
(100 %)
1 diff
(99.9 %id)
AA437354 ovarian tumor, ovary .o-u 1790 to 2259 22 to 491       470/491
(95 %)
6 diff
(98.8 %id)
AA490554 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1808 to 2095 1 to 287       287/287
(100 %)
2 diff
(99.4 %id)
AA496955 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 2108 to 2547 440 to 1       440/440
(100 %)
0 diff
(100 %id)
AA620462 lung, lung carcinoma .d 4219 to 4616 398 to 1       398/398
(100 %)
0 diff
(100 %id)
AA593748 breast .b 1957 to 2264 308 to 1       308/308
(100 %)
0 diff
(100 %id)
AA632409 breast .o-u 2260 to 2770 511 to 1 exact     511/511
(100 %)
0 diff
(100 %id)
AA815185 germinal center B cell .b 1810 to 2267 470 to 11       460/470
(97 %)
0 diff
(100 %id)
AA830992 germinal center B cell .o-u 2815 to 3279 481 to 17   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 465/468
(99 %)
6 diff
(98.8 %id)
AA832173 germinal center B cell .d 3810 to 4173 365 to 2       364/365
(99 %)
0 diff
(100 %id)
AA843092 parathyroid gland, parathyroid tumor .d 4266 to 4636 383 to 13   AAA   371/371
(100 %)
1 diff
(99.8 %id)
AA826575 carcinoid, lung .d 4570 to 4637 68 to 1       68/68
(100 %)
0 diff
(100 %id)
AA838362 Kidney, kidney tumor .p 1 to 408 408 to 1 exact tiling clone,   408/408
(100 %)
0 diff
(100 %id)
AA969221 pooled .d 2206 to 2667 463 to 1       463/463
(100 %)
5 diff
(99.0 %id)
AI088990 pooled .o-u 2968 to 3300 340 to 8   tiling clone,   333/340
(97 %)
0 diff
(100 %id)
AI018656   .o-u 2988 to 3282 296 to 2       295/296
(99 %)
0 diff
(100 %id)
AI056098 parathyroid gland, parathyroid tumor .d 4223 to 4636 426 to 13   AAA   414/414
(100 %)
0 diff
(100 %id)
AI092754 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 2097 to 2549 453 to 1       453/453
(100 %)
0 diff
(100 %id)
AI276522 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o-u 2015 to 2581 567 to 1 exact     567/567
(100 %)
0 diff
(100 %id)
AI346398 adenocarcinoma, colon .b 1868 to 2270 414 to 12   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 403/403
(100 %)
0 diff
(100 %id)
AI338268 lung .d 3776 to 4172 397 to 1       397/397
(100 %)
4 diff
(99.0 %id)
AI275998 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 4150 to 4637 488 to 1       488/488
(100 %)
0 diff
(100 %id)
AI250048 adenocarcinoma, Pancreas .d 4360 to 4637 286 to 9       278/286
(97 %)
0 diff
(100 %id)
AI471608 follicular lymphoma, lymph node .d 3758 to 4168 411 to 1       411/411
(100 %)
1 diff
(99.8 %id)
AI424474 Prostate .o-u 2773 to 3279 507 to 1       507/507
(100 %)
1 diff
(99.9 %id)
AI432158 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o-u 2023 to 2575 553 to 1 exact     553/553
(100 %)
0 diff
(100 %id)
AI523501 aorta .d 4058 to 4629 572 to 1       572/572
(100 %)
2 diff
(99.7 %id)
AI493256 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 4221 to 4636 416 to 1       416/416
(100 %)
0 diff
(100 %id)
AI801284 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 3923 to 4170 248 to 1       248/248
(100 %)
2 diff
(99.2 %id)
AI811067 ovary, tumor, 5 pooled (see description) .d 4326 to 4787 489 to 28   tiling clone, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 462/462
(100 %)
7 diff
(98.5 %id)
AI571685 adenocarcinoma, Pancreas .d 3751 to 4168 431 to 14   AAA   418/418
(100 %)
2 diff
(99.6 %id)
AI654012 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 4178 to 4637 461 to 2       460/461
(99 %)
0 diff
(100 %id)
AI619578 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 1872 to 2271 403 to 4       400/403
(99 %)
0 diff
(100 %id)
AI708312 aorta .o-u 2892 to 3279 388 to 1       388/388
(100 %)
2 diff
(99.5 %id)
AI806548 pooled .d 4100 to 4636 554 to 18   AAA   537/537
(100 %)
3 diff
(99.5 %id)
AI800804 pooled .d 4060 to 4636 593 to 17   AAA   577/577
(100 %)
0 diff
(100 %id)
AI740464 pooled .d 3694 to 4168 489 to 15   AAA   475/475
(100 %)
6 diff
(98.8 %id)
AI742462 pooled .d 4236 to 4788 557 to 7   tiling clone,   551/557
(98 %)
0 diff
(100 %id)
AI866223 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .o-u 3064 to 3279 216 to 1       216/216
(100 %)
0 diff
(100 %id)
AI923606 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 4579 to 4636 75 to 18   AAA   58/58
(100 %)
0 diff
(100 %id)
AW021935 cochlea, ear .d 4365 to 4629 1 to 265   fully sequenced, AAA   265/265
(100 %)
5 diff
(98.2 %id)
BI492886 cochlea, ear .d 4410 to 4622 213 to 1   fully sequenced,   213/213
(100 %)
0 diff
(100 %id)
AW072640 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .d 4173 to 4629 457 to 1       457/457
(100 %)
0 diff
(100 %id)
AW083312 colon, moderately differentiated adenocarcinoma .b 1894 to 2271 385 to 6       380/385
(98 %)
0 diff
(100 %id)
AW103630 brain, tumor, 5 pooled (see description) .o-u 2271 to 2559 287 to 1       287/287
(100 %)
3 diff
(99.0 %id)
AW148636 brain, tumor, 5 pooled (see description) .b 1894 to 2267 374 to 1       374/374
(100 %)
2 diff
(99.5 %id)
AW188926 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .o-u 3152 to 3284 133 to 1       133/133
(100 %)
9 diff
(93.3 %id)
AW589334 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 4232 to 4637 408 to 3       406/408
(99 %)
0 diff
(100 %id)
AW513325 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 4200 to 4637 440 to 3       438/440
(99 %)
0 diff
(100 %id)
AW516477 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .o-u 3055 to 3285 235 to 1       235/235
(100 %)
4 diff
(98.3 %id)
AW304155 brain, three pooled meningiomas .d 4234 to 4636 403 to 1       403/403
(100 %)
0 diff
(100 %id)
AW674508 cervix .g 1014 to 1329 317 to 2   tiling clone,   316/317
(99 %)
0 diff
(100 %id)
AW675119 cervix .g 1 to 445 1 to 445   tiling clone,   445/445
(100 %)
1 diff
(99.8 %id)
BF435816 pooled .n 1 to 422 450 to 29 H72P H90P tiling clone, AAA   422/422
(100 %)
2 diff
(99.6 %id)
BF002919 Prostate .d 3708 to 4168 461 to 1       461/461
(100 %)
0 diff
(100 %id)
BF111817 pooled .d 4101 to 4637 544 to 8       537/544
(98 %)
0 diff
(100 %id)
BE877756 large cell carcinoma, undifferentiated, lung .d 3598 to 4280 36 to 729       694/731
(94 %)
27 diff
(96.4 %id)
BE893698 melanotic melanoma, skin .o-u 2599 to 3274 1 to 675       675/677
(99 %)
14 diff
(98.0 %id)
BF104772 Kidney .o-u 2546 to 3160 1 to 612       612/613
(99 %)
5 diff
(99.2 %id)
BG533373 Liver .b 617 to 1336 1 to 719       719/882
(81 %)
20 diff
(97.8 %id)
BG497487 adenocarcinoma, Prostate .m 1 to 708 1 to 712 R98Q Y99I H100P E101* tiling clone,   712/718
(99 %)
9 diff
(98.8 %id)
BF218112 brain, glioblastoma .a 1482 to 2217 1 to 735       735/851
(86 %)
12 diff
(98.6 %id)
BG398671 Kidney .d 2972 to 3612 1 to 643       643/883
(72 %)
13 diff
(98.6 %id)
BG435231 placenta .d 2086 to 2689 1 to 612       612/749
(81 %)
7 diff
(99.1 %id)
BG502011 embryonal carcinoma, testis .a 1437 to 2158 1 to 727       727/727
(100 %)
13 diff
(98.3 %id)
BG503379 embryonal carcinoma, testis .o-u 1367 to 2009 1 to 654       654/655
(99 %)
20 diff
(97.0 %id)
BG564461 Liver .d 3993 to 4559 1 to 567       567/567
(100 %)
2 diff
(99.7 %id)
BG568786 Liver .d 3360 to 4169 1 to 811       811/811
(100 %)
7 diff
(99.2 %id)
BG618284 Liver .d 3584 to 4244 1 to 662       662/662
(100 %)
3 diff
(99.6 %id)
BG739896 skin .d 3277 to 4043 1 to 767       767/767
(100 %)
0 diff
(100 %id)
BG777779 adenocarcinoma, Prostate .d 45 to 100 1 to 56       56/56
(100 %)
1 diff
(98.3 %id)
BG718449 testis .d 44 to 802 1 to 759       759/760
(99 %)
18 diff
(97.7 %id)
BG752958 eye, normal pigmented retinal epithelium .d 3548 to 4182 1 to 639       639/664
(96 %)
10 diff
(98.5 %id)
BI092086 cervix .d 80 to 569 1 to 502       502/796
(63 %)
31 diff
(96.2 %id)
BI090001 cervix .f 1 to 758 1 to 755   tiling clone,   755/755
(100 %)
5 diff
(99.4 %id)
BI093063 cervix .e 1 to 779 12 to 793 P176L Q177R A178Q G179V P180L ... tiling clone,   782/794
(98 %)
16 diff
(98.0 %id)
BI224681 cervical carcinoma cell line, cervix .b 99 to 769 1 to 671       671/671
(100 %)
2 diff
(99.8 %id)
BI767304 pooled lung and spleen .o-u 1621 to 2156 1 to 543       543/544
(99 %)
9 diff
(98.4 %id)
BI769011 pooled lung and spleen .b 26 to 759 6 to 739       734/739
(99 %)
6 diff
(99.2 %id)
BI912358 leukocyte .o-u 1 to 671 1 to 677   tiling clone,   677/718
(94 %)
15 diff
(98.0 %id)
BI836430 pooled pancreas and spleen .d 3345 to 4043 1 to 711       711/711
(100 %)
19 diff
(97.4 %id)
BM469723 embryonal carcinoma, cell line, testis .d 1752 to 2626 13 to 893       881/1018
(86 %)
27 diff
(97.4 %id)
BM918692 pooled pancreas and spleen .d 3675 to 4744 10 to 1079       1070/1106
(96 %)
32 diff
(97.2 %id)
BQ002349 Chondrosarcoma, Left Pelvis .o-u 2787 to 3284 516 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 498/498
(100 %)
0 diff
(100 %id)
BQ003354 Chondrosarcoma, Left Pelvis .o-u 2645 to 3284 657 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 639/639
(100 %)
1 diff
(99.9 %id)
BQ003372 Chondrosarcoma, Left Pelvis .o-u 2632 to 3284 670 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 652/652
(100 %)
1 diff
(99.9 %id)
BQ005281 Chondrosarcoma, Left Pelvis .b 1923 to 2268 361 to 16       346/361
(95 %)
0 diff
(100 %id)
BQ005345 Chondrosarcoma, Left Pelvis .d 4021 to 4629 626 to 19   AAA   608/608
(100 %)
7 diff
(98.9 %id)
BQ232580 large cell carcinoma, lung .b 42 to 895 1 to 864       864/893
(96 %)
16 diff
(98.3 %id)
BQ431335 melanotic melanoma, skin .a 1419 to 2045 1 to 633       633/776
(81 %)
13 diff
(98.4 %id)
BQ422586 embryonal carcinoma, cell line, testis .o-u 1024 to 1912 40 to 947       908/950
(95 %)
30 diff
(96.9 %id)
BQ435750 testis .d 3812 to 4496 1 to 697       697/860
(81 %)
27 diff
(96.9 %id)
BM967053 Islets of Langerhans, Pancreas .o-u 1774 to 2344 1 to 571   tiling clone,   571/571
(100 %)
0 diff
(100 %id)
BM967266 Islets of Langerhans, Pancreas .o-u 1774 to 2343 1 to 570       570/570
(100 %)
0 diff
(100 %id)
CK823497 Islets of Langerhans, Pancreas .o-u 1774 to 2321 1 to 548       548/548
(100 %)
3 diff
(99.5 %id)
BC065823 Peripheral Nervous System, sympathetictrunk .o-u 842 to 2559 1 to 1718 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1718/1718
(100 %)
2 diff
(99.9 %id)
BQ720691 sympathetic trunk .o-u 843 to 1707 1 to 881   available from MGC,   881/887
(99 %)
32 diff
(96.4 %id)
BU568924 testis .l 1 to 706 5 to 716 P114H H115T L116Y S117L G118V ... tiling clone,   716/788
(90 %)
12 diff
(98.5 %id)
BU963670 mixed (pool of 40 RNAs) .o-u 915 to 1635 1 to 733       733/763
(96 %)
20 diff
(97.4 %id)
CB960649 Human Placenta, placenta .d 84 to 626 21 to 562       542/860
(63 %)
17 diff
(98.1 %id)
CB958976 Pooled-Glandular .d 2720 to 3388 1 to 682       682/778
(87 %)
37 diff
(95.3 %id)
CD105081 Pooled-Skin .d 2297 to 2408 1 to 114       114/181
(62 %)
5 diff
(97.3 %id)
CD104434 Pooled-Skin .d 2608 to 3334 1 to 730       730/730
(100 %)
8 diff
(99.0 %id)
CD250572 Blood vessels - aorta, basilar and artery .d 2250 to 2969 1 to 730       730/741
(98 %)
26 diff
(96.5 %id)
CD358986 testis .d 81 to 618 1 to 540       540/1297
(41 %)
8 diff
(99.4 %id)
CD512697 Pooled-Skin .d 3040 to 3712 1 to 681       681/784
(86 %)
16 diff
(98.0 %id)
CD642225 Embryonic Stem cells .k 1217 to 1993 12 to 786   tiling clone,   775/847
(91 %)
12 diff
(98.6 %id)
CF145988 CNCAP(3)T-225 cell line, Prostate .b 1353 to 1826 1 to 474       474/474
(100 %)
7 diff
(98.6 %id)
TI_57181406   .o-u 1621 to 2156 54 to 596       543/597
(90 %)
9 diff
(98.5 %id)
TI_57181834   .b 26 to 759 32 to 765       734/765
(95 %)
6 diff
(99.3 %id)
TI_57235585   .o-u 1 to 671 1 to 677       677/718
(94 %)
15 diff
(98.0 %id)
TI_57162735   .d 3345 to 4043 27 to 737       711/737
(96 %)
6 diff
(99.2 %id)
CB143357 Liver .b 1371 to 1821 1 to 451       451/451
(100 %)
0 diff
(100 %id)
CB158011 Liver .b 793 to 1378 1 to 586       586/586
(100 %)
0 diff
(100 %id)
NM_133462.3   .a 1 to 3032 1 to 3032 exact RefSeq, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 3032/3032
(100 %)
0 diff
(100 %id)
NM_001042601.2   .d 2 to 4787 1 to 4786 exact RefSeq, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 4786/4786
(100 %)
0 diff
(100 %id)
AV749322 Pituitary .d 1639 to 1987 1 to 342       342/343
(99 %)
5 diff
(98.6 %id)
AV748035 Pituitary .d 2047 to 2353 1 to 300       300/313
(95 %)
12 diff
(96.2 %id)
AV752754 Pituitary .d 1123 to 1766 1 to 635       635/656
(96 %)
42 diff
(93.6 %id)
DA683222   .d 45 to 531 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
DB322758   .d 4084 to 4629 548 to 1       548/548
(100 %)
4 diff
(99.3 %id)
DA736519   .b 586 to 1402 2 to 815   capped   814/815
(99 %)
5 diff
(99.4 %id)
DB369017   .b 2161 to 2721 555 to 1   tiling clone,   555/557
(99 %)
14 diff
(97.5 %id)
DA736975   .d 447 to 1183 2 to 735   capped   734/816
(89 %)
13 diff
(98.5 %id)
DB369543   .d 4148 to 4636 490 to 1       490/533
(91 %)
3 diff
(99.5 %id)
DA803334 brain .d 36 to 568 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
CV572795 cornea, eye .o-u 10 to 643 1 to 634   tiling clone,   634/634
(100 %)
0 diff
(100 %id)
DA838279 placenta .d 71 to 631 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA884686   .d 71 to 628 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
CR989061 T-Lymphocytes .h 1 to 833 5 to 839 exact tiling clone,   839/839
(100 %)
3 diff
(99.7 %id)
BM740270 Ascites, stomach .d 3469 to 3977 1 to 509       509/509
(100 %)
0 diff
(100 %id)
BM739756 Ascites, stomach .d 3469 to 3980 1 to 512       512/512
(100 %)
0 diff
(100 %id)
BM754756 Ascites, stomach .d 3469 to 3974 1 to 506       506/506
(100 %)
0 diff
(100 %id)
TI_1948087035   .b 52 to 754 126 to 831       706/1329
(53 %)
13 diff
(99.1 %id)
TI_1948087180   .d 133 to 990 125 to 993       867/1297
(66 %)
24 diff
(98.2 %id)
TI_1948087181   .d 3287 to 4205 1038 to 123       916/1322
(69 %)
0 diff
(100 %id)
TI_1948087328   .d 135 to 1071 129 to 1065       937/1261
(74 %)
25 diff
(98.1 %id)
TI_1948087329   .d 3296 to 4205 1026 to 125       902/1249
(72 %)
0 diff
(100 %id)
TI_1948087480   .d 133 to 991 125 to 990       866/1300
(66 %)
33 diff
(97.5 %id)
TI_1948087481   .d 3289 to 4205 1046 to 124       923/1382
(66 %)
0 diff
(100 %id)
DR005365 Prostate .d 39 to 721 22 to 704       683/704
(97 %)
6 diff
(99.2 %id)
DR001486 fetal brain .b 12 to 808 1 to 799       799/799
(100 %)
10 diff
(98.8 %id)
BM146149 leukopheresis .d 48 to 538 1 to 492       492/492
(100 %)
5 diff
(99.0 %id)
BM151734 leukopheresis .d 65 to 524 1 to 459       459/493
(93 %)
9 diff
(98.2 %id)
BM153228 leukopheresis .d 3899 to 4166 286 to 21   AAA   266/274
(97 %)
0 diff
(100 %id)
BE247018 leukopheresis .c 1621 to 1895 275 to 1       275/275
(100 %)
4 diff
(98.6 %id)
BM152507 leukopheresis .d 59 to 518 1 to 458       458/459
(99 %)
9 diff
(98.1 %id)
DB014846 esophageal, tumor tissue .d 40 to 510 2 to 474   capped   473/473
(100 %)
5 diff
(99.0 %id)
DB048520 testis .d 44 to 600 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DB070409 testis .d 71 to 598 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DB083675 testis .d 36 to 578 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB096059 testis .d 71 to 628 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB108704 thymus .b 745 to 1334 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DB139397 thymus .d 34 to 575 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DB153545 thymus .b 16 to 595 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
TI_149279845   .i 1 to 892 943 to 61 K2G R3N R4A K5L S6L ... tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 883/1129
(78 %)
28 diff
(97.6 %id)
TI_149284346   .d 3364 to 4189 876 to 63       814/876
(92 %)
0 diff
(100 %id)
TI_149294791   .o-u 1865 to 2771 954 to 60 exact AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 895/1004
(89 %)
21 diff
(98.0 %id)
TI_149298199   .o-u 2449 to 3279 905 to 87   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 819/920
(89 %)
18 diff
(98.1 %id)
TI_149313197   .d 3847 to 4636 880 to 95   AAA   786/962
(81 %)
9 diff
(99.1 %id)
TI_154047512   .d 3865 to 4636 871 to 102   AAA   770/948
(81 %)
5 diff
(99.5 %id)
TI_154115102   .d 3802 to 4638 928 to 97   AAA   832/993
(83 %)
15 diff
(98.5 %id)
TI_154178321   .a 1439 to 1986 80 to 627       548/549
(99 %)
7 diff
(98.8 %id)
DB181233 liver, tumor tissue .d 49 to 594 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DB200722 trachea .l 1 to 586 2 to 588   tiling clone, capped   587/596
(98 %)
2 diff
(99.7 %id)
DB219913 trachea .d 71 to 419 2 to 350   capped   349/353
(98 %)
1 diff
(99.8 %id)
DB220752 trachea .d 71 to 647 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
BU678921 lung, Primary Lung Epithelial Cells .i 240 to 892 672 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 654/654
(100 %)
1 diff
(99.9 %id)
BU680508 lung .d 3463 to 4168 721 to 19   AAA   703/703
(100 %)
5 diff
(99.3 %id)
BU683419 lung .o-u 2021 to 2771 768 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 750/750
(100 %)
1 diff
(99.9 %id)
CF541236 lung .d 4048 to 4636 607 to 19   AAA   589/589
(100 %)
0 diff
(100 %id)
BU684626 lung, Primary Lung Cystic Fibrosis EpithelialCells .o-u 2482 to 3279 809 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 791/794
(99 %)
11 diff
(98.7 %id)
BU689879 Human Lung Epithelial cells, lung .d 3604 to 4168 583 to 19   AAA   565/574
(98 %)
0 diff
(100 %id)
CA313266 Human Lung Epithelial cells, lung .d 3897 to 4635 755 to 17   AAA   739/739
(100 %)
0 diff
(100 %id)
CA313280 Human Lung Epithelial cells, lung .d 3897 to 4636 758 to 19   AAA   740/740
(100 %)
0 diff
(100 %id)
CA313297 Human Lung Epithelial cells, lung .d 3898 to 4635 754 to 17   AAA   738/738
(100 %)
0 diff
(100 %id)
CA311556 Human Lung Epithelial cells, lung .d 3410 to 4167 775 to 19   AAA   757/757
(100 %)
1 diff
(99.9 %id)
BM714932 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o-u 2656 to 3276 1 to 621       621/621
(100 %)
0 diff
(100 %id)
BM931037 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 3752 to 4440 1 to 689       689/689
(100 %)
0 diff
(100 %id)
CA448976 Chondrosarcoma, Left Pelvis .d 3896 to 4638 758 to 17   AAA   742/742
(100 %)
1 diff
(99.9 %id)
CA412743 Chondrosarcoma Grade II, Left Pelvis .d 3902 to 4636 753 to 19   AAA   735/735
(100 %)
3 diff
(99.6 %id)
BQ773752 Chondrosarcoma Grade II, Left Pelvis .d 4042 to 4636 612 to 19   AAA   594/594
(100 %)
1 diff
(99.9 %id)
DB258008 uterus .d 48 to 615 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB263827 uterus .d 44 to 601 2 to 559   capped   558/558
(100 %)
3 diff
(99.5 %id)
DB270552 uterus .b 16 to 541 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DB287978 uterus .b 43 to 600 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB292598 uterus .d 36 to 552 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
AV708023 adrenal gland .d 2047 to 2353 1 to 300     Suspected internal deletion, this clone was ignored 300/313
(95 %)
12 diff
(96.2 %id)
AI557489 Prostate .d 1123 to 1766 1 to 635     Submitted on the opposite strand 635/656
(96 %)
42 diff
(93.6 %id)
BE161775 head_neck .d 45 to 531 2 to 488     Submitted on the opposite strand, submitted on the opposite strand 487/487
(100 %)
1 diff
(99.8 %id)
CD683703 normal nasopharynx .d 4084 to 4629 548 to 1     Suspected internal deletion, this clone was ignored 548/548
(100 %)
4 diff
(99.3 %id)
AV692869 hepatocellular carcinoma .b 586 to 1402 2 to 815     Suspected internal deletion, this clone was ignored 814/815
(99 %)
5 diff
(99.4 %id)
AV725632 hypothalamus .b 2161 to 2721 555 to 1   tiling clone, Suspected internal deletion, this clone was ignored 555/557
(99 %)
14 diff
(97.5 %id)
DA736975   .d 447 to 1183 2 to 735   capped   734/816
(89 %)
13 diff
(98.5 %id)
DB369543   .d 4148 to 4636 490 to 1       490/533
(91 %)
3 diff
(99.5 %id)
DA803334 brain .d 36 to 568 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
CV572795 cornea, eye .o-u 10 to 643 1 to 634   tiling clone,   634/634
(100 %)
0 diff
(100 %id)
CV572795 cornea, eye .o-u 10 to 643 1 to 634   tiling clone,   634/634
(100 %)
0 diff
(100 %id)
DA838279 placenta .d 71 to 631 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA884686   .d 71 to 628 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
CR989061 T-Lymphocytes .h 1 to 833 5 to 839 exact tiling clone,   839/839
(100 %)
3 diff
(99.7 %id)
BM740270 Ascites, stomach .d 3469 to 3977 1 to 509       509/509
(100 %)
0 diff
(100 %id)
BM740270 Ascites, stomach .d 3469 to 3977 1 to 509       509/509
(100 %)
0 diff
(100 %id)
BM739756 Ascites, stomach .d 3469 to 3980 1 to 512       512/512
(100 %)
0 diff
(100 %id)
BM739756 Ascites, stomach .d 3469 to 3980 1 to 512       512/512
(100 %)
0 diff
(100 %id)
BM754756 Ascites, stomach .d 3469 to 3974 1 to 506       506/506
(100 %)
0 diff
(100 %id)
BM754756 Ascites, stomach .d 3469 to 3974 1 to 506       506/506
(100 %)
0 diff
(100 %id)
TI_1948087035   .b 52 to 754 126 to 831       706/1329
(53 %)
13 diff
(99.1 %id)
TI_1948087180   .d 133 to 990 125 to 993       867/1297
(66 %)
24 diff
(98.2 %id)
TI_1948087181   .d 3287 to 4205 1038 to 123       916/1322
(69 %)
0 diff
(100 %id)
TI_1948087328   .d 135 to 1071 129 to 1065       937/1261
(74 %)
25 diff
(98.1 %id)
TI_1948087329   .d 3296 to 4205 1026 to 125       902/1249
(72 %)
0 diff
(100 %id)
TI_1948087480   .d 133 to 991 125 to 990       866/1300
(66 %)
33 diff
(97.5 %id)
TI_1948087481   .d 3289 to 4205 1046 to 124       923/1382
(66 %)
0 diff
(100 %id)
DR005365 Prostate .d 39 to 721 22 to 704       683/704
(97 %)
6 diff
(99.2 %id)
DR001486 fetal brain .b 12 to 808 1 to 799       799/799
(100 %)
10 diff
(98.8 %id)
BM146149 leukopheresis .d 48 to 538 1 to 492       492/492
(100 %)
5 diff
(99.0 %id)
BM151734 leukopheresis .d 65 to 524 1 to 459       459/493
(93 %)
9 diff
(98.2 %id)
BM153228 leukopheresis .d 3899 to 4166 286 to 21   AAA   266/274
(97 %)
0 diff
(100 %id)
BE247018 leukopheresis .c 1621 to 1895 275 to 1       275/275
(100 %)
4 diff
(98.6 %id)
BM152507 leukopheresis .d 59 to 518 1 to 458       458/459
(99 %)
9 diff
(98.1 %id)
DB014846 esophageal, tumor tissue .d 40 to 510 2 to 474   capped   473/473
(100 %)
5 diff
(99.0 %id)
DB048520 testis .d 44 to 600 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DB070409 testis .d 71 to 598 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DB083675 testis .d 36 to 578 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB096059 testis .d 71 to 628 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB108704 thymus .b 745 to 1334 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DB139397 thymus .d 34 to 575 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DB153545 thymus .b 16 to 595 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
TI_149279845   .i 1 to 892 943 to 61 K2G R3N R4A K5L S6L ... tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 883/1129
(78 %)
28 diff
(97.6 %id)
TI_149284346   .d 3364 to 4189 876 to 63       814/876
(92 %)
0 diff
(100 %id)
TI_149294791   .o-u 1865 to 2771 954 to 60 exact AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 895/1004
(89 %)
21 diff
(98.0 %id)
TI_149298199   .o-u 2449 to 3279 905 to 87   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 819/920
(89 %)
18 diff
(98.1 %id)
TI_149313197   .d 3847 to 4636 880 to 95   AAA   786/962
(81 %)
9 diff
(99.1 %id)
TI_154047512   .d 3865 to 4636 871 to 102   AAA   770/948
(81 %)
5 diff
(99.5 %id)
TI_154115102   .d 3802 to 4638 928 to 97   AAA   832/993
(83 %)
15 diff
(98.5 %id)
TI_154178321   .a 1439 to 1986 80 to 627       548/549
(99 %)
7 diff
(98.8 %id)
DB181233 liver, tumor tissue .d 49 to 594 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DB200722 trachea .l 1 to 586 2 to 588   tiling clone, capped   587/596
(98 %)
2 diff
(99.7 %id)
DB219913 trachea .d 71 to 419 2 to 350   capped   349/353
(98 %)
1 diff
(99.8 %id)
DB220752 trachea .d 71 to 647 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
BU678921 lung, Primary Lung Epithelial Cells .i 240 to 892 672 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 654/654
(100 %)
1 diff
(99.9 %id)
BU678921 lung, Primary Lung Epithelial Cells .i 240 to 892 672 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 654/654
(100 %)
1 diff
(99.9 %id)
BU680508 lung .d 3463 to 4168 721 to 19   AAA   703/703
(100 %)
5 diff
(99.3 %id)
BU683419 lung .o-u 2021 to 2771 768 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 750/750
(100 %)
1 diff
(99.9 %id)
CF541236 lung .d 4048 to 4636 607 to 19   AAA   589/589
(100 %)
0 diff
(100 %id)
BU684626 lung, Primary Lung Cystic Fibrosis EpithelialCells .o-u 2482 to 3279 809 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 791/794
(99 %)
11 diff
(98.7 %id)
BU684626 lung, Primary Lung Cystic Fibrosis EpithelialCells .o-u 2482 to 3279 809 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 791/794
(99 %)
11 diff
(98.7 %id)
BU689879 Human Lung Epithelial cells, lung .d 3604 to 4168 583 to 19   AAA   565/574
(98 %)
0 diff
(100 %id)
BU689879 Human Lung Epithelial cells, lung .d 3604 to 4168 583 to 19   AAA   565/574
(98 %)
0 diff
(100 %id)
CA313266 Human Lung Epithelial cells, lung .d 3897 to 4635 755 to 17   AAA   739/739
(100 %)
0 diff
(100 %id)
CA313266 Human Lung Epithelial cells, lung .d 3897 to 4635 755 to 17   AAA   739/739
(100 %)
0 diff
(100 %id)
CA313280 Human Lung Epithelial cells, lung .d 3897 to 4636 758 to 19   AAA   740/740
(100 %)
0 diff
(100 %id)
CA313280 Human Lung Epithelial cells, lung .d 3897 to 4636 758 to 19   AAA   740/740
(100 %)
0 diff
(100 %id)
CA313297 Human Lung Epithelial cells, lung .d 3898 to 4635 754 to 17   AAA   738/738
(100 %)
0 diff
(100 %id)
CA313297 Human Lung Epithelial cells, lung .d 3898 to 4635 754 to 17   AAA   738/738
(100 %)
0 diff
(100 %id)
CA311556 Human Lung Epithelial cells, lung .d 3410 to 4167 775 to 19   AAA   757/757
(100 %)
1 diff
(99.9 %id)
CA311556 Human Lung Epithelial cells, lung .d 3410 to 4167 775 to 19   AAA   757/757
(100 %)
1 diff
(99.9 %id)
BM714932 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o-u 2656 to 3276 1 to 621       621/621
(100 %)
0 diff
(100 %id)
BM714932 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o-u 2656 to 3276 1 to 621       621/621
(100 %)
0 diff
(100 %id)
BM931037 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 3752 to 4440 1 to 689       689/689
(100 %)
0 diff
(100 %id)
BM931037 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 3752 to 4440 1 to 689       689/689
(100 %)
0 diff
(100 %id)
CA448976 Chondrosarcoma, Left Pelvis .d 3896 to 4638 758 to 17   AAA   742/742
(100 %)
1 diff
(99.9 %id)
CA448976 Chondrosarcoma, Left Pelvis .d 3896 to 4638 758 to 17   AAA   742/742
(100 %)
1 diff
(99.9 %id)
CA412743 Chondrosarcoma Grade II, Left Pelvis .d 3902 to 4636 753 to 19   AAA   735/735
(100 %)
3 diff
(99.6 %id)
CA412743 Chondrosarcoma Grade II, Left Pelvis .d 3902 to 4636 753 to 19   AAA   735/735
(100 %)
3 diff
(99.6 %id)
BQ773752 Chondrosarcoma Grade II, Left Pelvis .d 4042 to 4636 612 to 19   AAA   594/594
(100 %)
1 diff
(99.9 %id)
BQ773752 Chondrosarcoma Grade II, Left Pelvis .d 4042 to 4636 612 to 19   AAA   594/594
(100 %)
1 diff
(99.9 %id)
DB258008 uterus .d 48 to 615 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB263827 uterus .d 44 to 601 2 to 559   capped   558/558
(100 %)
3 diff
(99.5 %id)
DB270552 uterus .b 16 to 541 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DB287978 uterus .b 43 to 600 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB292598 uterus .d 36 to 552 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI