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Gene TRIM16andCDRT1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
455 supporting clones for gene TRIM16andCDRT1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA351845 brain TRIM16andCDRT1.f 2871 to 3187 318 to 3       316/318
(99 %)
0 diff
(100 %id)
AA351846 brain TRIM16andCDRT1.a 936 to 1283 1 to 349       349/349
(100 %)
3 diff
(99.2 %id)
AA384725 thyroid gland TRIM16andCDRT1.f 2604 to 2882 1 to 282       282/282
(100 %)
2 diff
(99.3 %id)
AB209899 aorta endothelial cell TRIM16andCDRT1.a 1 to 5510 5 to 5513 L953P tiling clone,   5513/5513
(100 %)
6 diff
(99.9 %id)
DA009819 adrenal gland TRIM16andCDRT1.a 8 to 531 2 to 525   capped   524/539
(97 %)
9 diff
(98.4 %id)
DA013813 adrenal gland TRIM16andCDRT1.a 5 to 560 2 to 557   capped   556/557
(99 %)
2 diff
(99.7 %id)
DA017148 adrenal gland TRIM16andCDRT1.a 8 to 480 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
AF096870 mammary gland TRIM16andCDRT1.d 833 to 3402 1 to 2568 L235P S246N K521N N541S G561V     2568/2568
(100 %)
11 diff
(99.6 %id)
AF337810   TRIM16andCDRT1.i-u 1 to 795 1 to 795 exact tiling clone,   795/800
(99 %)
1 diff
(99.9 %id)
AK002035 placenta TRIM16andCDRT1.d 1037 to 3402 1 to 2366 E121D R493W available from FLJ,   2366/2366
(100 %)
2 diff
(100.0 %id)
AK056026   TRIM16andCDRT1.f 20 to 3196 12 to 3189 exact tiling clone, available from FLJ,   3178/3178
(100 %)
3 diff
(100.0 %id)
AK314557 tongue TRIM16andCDRT1.d 1023 to 2754 1 to 1732 V560G G561V     1732/1732
(100 %)
3 diff
(99.9 %id)
DA021438   TRIM16andCDRT1.a 10 to 578 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA026551   TRIM16andCDRT1.a 6 to 580 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA027116   TRIM16andCDRT1.d 979 to 1534 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA033253   TRIM16andCDRT1.a 15 to 600 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
AW062475 colon TRIM16andCDRT1.b 2552 to 2833 18 to 301   tiling clone,   284/301
(94 %)
6 diff
(98.1 %id)
AW368401 head_neck TRIM16andCDRT1.f 2818 to 3112 1 to 295       295/295
(100 %)
1 diff
(99.7 %id)
AW378487 head_neck TRIM16andCDRT1.a 576 to 1239 1 to 657       657/705
(93 %)
20 diff
(97.2 %id)
AW378489 head_neck TRIM16andCDRT1.a 571 to 1212 34 to 677       644/741
(86 %)
14 diff
(98.2 %id)
AW378496 head_neck TRIM16andCDRT1.a 577 to 1284 718 to 18       701/755
(92 %)
14 diff
(98.2 %id)
AW378503 head_neck TRIM16andCDRT1.a 610 to 1251 639 to 6       634/640
(99 %)
17 diff
(97.4 %id)
AW388081.
matches multiple genes
stomach TRIM16andCDRT1.f 2972 to 3133 10 to 167     also hits gene TRIM16L 158/167
(94 %)
6 diff
(96.5 %id)
AW958945   TRIM16andCDRT1.f 2605 to 3122 1 to 520       520/520
(100 %)
17 diff
(96.8 %id)
AW966535   TRIM16andCDRT1.f 1678 to 2298 1 to 625       625/636
(98 %)
21 diff
(96.7 %id)
AW966540   TRIM16andCDRT1.f 1678 to 2216 1 to 538       538/557
(96 %)
14 diff
(97.5 %id)
CB152952.
matches multiple genes
brain TRIM16andCDRT1.g 542 to 968 1 to 427     also hits gene TRIM16L 427/427
(100 %)
8 diff
(98.2 %id)
BC053514 Skin, melanoma, melanotic TRIM16andCDRT1.d 503 to 3402 1 to 2900 G561V tiling clone, available from MGC, AAA   2900/2900
(100 %)
1 diff
(100.0 %id)
BC067096 Skin, melanoma, melanotic TRIM16andCDRT1.d 503 to 3402 1 to 2900 G561V available from MGC, AAA   2900/2900
(100 %)
1 diff
(100.0 %id)
TI_2194575142   TRIM16andCDRT1.c 1639 to 2440 51 to 852   tiling clone,   802/1256
(63 %)
10 diff
(99.3 %id)
TI_2194576271   TRIM16andCDRT1.c 1639 to 2440 51 to 852       802/1285
(62 %)
10 diff
(99.3 %id)
TI_2194576652   TRIM16andCDRT1.c 1639 to 2440 871 to 70       802/1276
(62 %)
1 diff
(100.0 %id)
TI_2194579604   TRIM16andCDRT1.c 1639 to 2440 867 to 66       802/1250
(64 %)
1 diff
(100.0 %id)
TI_2194576273   TRIM16andCDRT1.o 1 to 564 49 to 612 H4R tiling clone,   564/1284
(43 %)
9 diff
(99.3 %id)
TI_2194576654   TRIM16andCDRT1.o 1 to 564 630 to 67 H4R     564/1303
(43 %)
1 diff
(100.0 %id)
TI_2194579603   TRIM16andCDRT1.o 1 to 569 53 to 622 H4R     570/1230
(46 %)
13 diff
(99.0 %id)
TI_2194579605   TRIM16andCDRT1.o 1 to 564 631 to 68 H4R     564/1273
(44 %)
1 diff
(100.0 %id)
TI_2194579607   TRIM16andCDRT1.o 2 to 564 627 to 65 H4R     563/1253
(44 %)
1 diff
(100.0 %id)
BE005619 breast_normal TRIM16andCDRT1.vh-u 39 to 442 1 to 401       401/408
(98 %)
6 diff
(98.6 %id)
BE005839 breast_normal TRIM16andCDRT1.vh-u 1 to 435 1 to 436   tiling clone,   436/436
(100 %)
7 diff
(98.4 %id)
BE076453 breast TRIM16andCDRT1.f 2321 to 2494 103 to 277       175/277
(63 %)
6 diff
(97.9 %id)
BE172545 head_neck TRIM16andCDRT1.f 2107 to 2326 14 to 234       221/234
(94 %)
14 diff
(94.1 %id)
BF091455 testis_normal TRIM16andCDRT1.vn 1 to 274 390 to 117 exact tiling clone,   274/390
(70 %)
0 diff
(100 %id)
BF092307 testis_normal TRIM16andCDRT1.f 1854 to 2230 381 to 1       381/381
(100 %)
8 diff
(98.0 %id)
BF327447 breast_normal TRIM16andCDRT1.vm-u 1 to 334 17 to 349 C25V V26S S27L S28V tiling clone,   333/349
(95 %)
6 diff
(98.3 %id)
BF349850 head_neck TRIM16andCDRT1.a 678 to 1157 608 to 125       484/662
(73 %)
16 diff
(97.6 %id)
BF381331 uterus_tumor TRIM16andCDRT1.a 694 to 1213 530 to 8       521/530
(98 %)
19 diff
(96.5 %id)
BF733535 amnion_normal TRIM16andCDRT1.l-u 417 to 545 129 to 1   tiling clone, Submitted on the opposite strand 129/129
(100 %)
1 diff
(99.3 %id)
BF811849 colon_ins TRIM16andCDRT1.vd 185 to 480 298 to 2     Submitted on the opposite strand 297/298
(99 %)
0 diff
(100 %id)
BF920931 nervous_tumor TRIM16andCDRT1.f 2356 to 2800 444 to 1     Submitted on the opposite strand 444/487
(91 %)
13 diff
(97.4 %id)
BG996847 head_neck TRIM16andCDRT1.f 2942 to 3204 23 to 290   tiling clone,   268/291
(92 %)
6 diff
(98.0 %id)
BI017869.
matches multiple genes
lung_tumor TRIM16andCDRT1.r 322 to 515 9 to 204     also hits gene TRIM16L 196/204
(96 %)
9 diff
(95.6 %id)
BI017884 lung_tumor TRIM16andCDRT1.s 350 to 775 1 to 425   tiling clone,   425/425
(100 %)
2 diff
(99.6 %id)
BI017885 lung_tumor TRIM16andCDRT1.s 362 to 761 1 to 398       398/398
(100 %)
5 diff
(98.8 %id)
BI042769 ovary TRIM16andCDRT1.f 2958 to 3189 1 to 233   AAA   233/233
(100 %)
7 diff
(97.0 %id)
DA047302   TRIM16andCDRT1.g 598 to 1172 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA048188   TRIM16andCDRT1.a 1 to 533 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA048218   TRIM16andCDRT1.g 537 to 1073 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA051220   TRIM16andCDRT1.g 598 to 1163 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BQ332172 lung_tumor TRIM16andCDRT1.f 2302 to 2582 286 to 8       279/286
(97 %)
0 diff
(100 %id)
BQ332209 lung_tumor TRIM16andCDRT1.f 2199 to 2589 394 to 5       390/394
(98 %)
0 diff
(100 %id)
BQ332216 lung_tumor TRIM16andCDRT1.f 2040 to 2583 546 to 2       545/546
(99 %)
0 diff
(100 %id)
BQ332396 lung_tumor TRIM16andCDRT1.f 2180 to 2594 418 to 4       415/418
(99 %)
0 diff
(100 %id)
BQ332446.
matches multiple genes
lung_tumor TRIM16andCDRT1.f 2053 to 2155 120 to 20     also hits gene TRIM16L 101/120
(84 %)
0 diff
(100 %id)
BQ332528 lung_tumor TRIM16andCDRT1.f 1951 to 2431 484 to 4       481/484
(99 %)
0 diff
(100 %id)
DA055408 cerebellum TRIM16andCDRT1.q 1 to 561 2 to 563 V51X E52G N53E G54R V56G ... tiling clone, capped   562/562
(100 %)
2 diff
(99.7 %id)
DA109008 cerebellum TRIM16andCDRT1.f 11 to 501 2 to 492   capped   491/491
(100 %)
3 diff
(99.4 %id)
DA114043 cerebellum TRIM16andCDRT1.f 13 to 566 2 to 555   capped   554/554
(100 %)
4 diff
(99.3 %id)
DA150664 amygdala TRIM16andCDRT1.d 888 to 1462 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA153192 amygdala TRIM16andCDRT1.d 1006 to 1570 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA155977 amygdala TRIM16andCDRT1.g 598 to 1167 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA157669 amygdala TRIM16andCDRT1.vf -8 to 546 2 to 558 L14F L33H D34G R35Q C36V ... tiling clone, capped   557/557
(100 %)
3 diff
(99.5 %id)
DA178257 amygdala TRIM16andCDRT1.g 492 to 1058 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
DA181206 amygdala TRIM16andCDRT1.a 1 to 560 2 to 561   capped   560/570
(98 %)
4 diff
(99.3 %id)
DA238902 brain TRIM16andCDRT1.f 1 to 582 2 to 583   tiling clone, capped   582/582
(100 %)
5 diff
(99.2 %id)
DA265564 caudate nucleus TRIM16andCDRT1.a 3 to 554 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA360087 subthalamic nucleus TRIM16andCDRT1.a 15 to 578 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA382914 thalamus TRIM16andCDRT1.a 6 to 630 2 to 626   capped   625/625
(100 %)
0 diff
(100 %id)
BX099010 placenta TRIM16andCDRT1.f 2334 to 2953 1 to 622       622/622
(100 %)
1 diff
(99.9 %id)
BX112007 pooled germ cell tumors TRIM16andCDRT1.vl-u 1 to 458 1 to 457 exact tiling clone, AAA   457/458
(99 %)
2 diff
(99.6 %id)
CB150684 cervix, Uterine TRIM16andCDRT1.g 520 to 1093 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
CB151777 cervix, Uterine TRIM16andCDRT1.g 561 to 1163 1 to 603       603/603
(100 %)
0 diff
(100 %id)
C03298 heart TRIM16andCDRT1.f 2145 to 2638 1 to 501       501/501
(100 %)
9 diff
(98.3 %id)
CD622732   TRIM16andCDRT1.f 1603 to 2452 861 to 16       846/861
(98 %)
9 diff
(99.0 %id)
CD622733   TRIM16andCDRT1.d 811 to 1551 1 to 736       736/736
(100 %)
8 diff
(99.0 %id)
CD701503 normal nasopharynx TRIM16andCDRT1.a 205 to 755 32 to 582       551/582
(94 %)
6 diff
(99.0 %id)
CD707256 normal nasopharynx TRIM16andCDRT1.a 584 to 919 22 to 358       337/358
(94 %)
9 diff
(97.5 %id)
DA424465   TRIM16andCDRT1.q 22 to 587 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
CN266761 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells TRIM16andCDRT1.r 556 to 719 1 to 165       165/165
(100 %)
5 diff
(97.0 %id)
CN289786 embryonic stem cells, DMSO-treated H9 cellline TRIM16andCDRT1.t-u 1 to 770 9 to 778 exact tiling clone,   770/783
(98 %)
1 diff
(99.9 %id)
CN370766 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 TRIM16andCDRT1.f 1813 to 2247 1 to 435       435/435
(100 %)
0 diff
(100 %id)
CN370767 embryonic stem cells, DMSO-treated H9 cellline TRIM16andCDRT1.f 1939 to 2373 1 to 436       436/436
(100 %)
2 diff
(99.6 %id)
CN370768 embryonic stem cells, cell lines H1, H7, andH9 TRIM16andCDRT1.vd 93 to 563 1 to 471   tiling clone,   471/471
(100 %)
0 diff
(100 %id)
CR457136   TRIM16andCDRT1.d 1060 to 2753 1 to 1694       1694/1695
(99 %)
3 diff
(99.9 %id)
DA434787 tongue, tumor tissue TRIM16andCDRT1.d 937 to 1474 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA435734 tongue, tumor tissue TRIM16andCDRT1.a 8 to 578 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA435883 tongue, tumor tissue TRIM16andCDRT1.a 6 to 526 2 to 522   capped   521/521
(100 %)
1 diff
(99.9 %id)
DA436568 tongue, tumor tissue TRIM16andCDRT1.d 1008 to 1575 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA436895 tongue, tumor tissue TRIM16andCDRT1.a 40 to 618 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA439984 tongue, tumor tissue TRIM16andCDRT1.a 6 to 594 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA440199 tongue, tumor tissue TRIM16andCDRT1.a 159 to 732 2 to 575   capped   574/574
(100 %)
4 diff
(99.4 %id)
DA440244 tongue, tumor tissue TRIM16andCDRT1.d 1006 to 1558 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA441538 tongue, tumor tissue TRIM16andCDRT1.a 6 to 575 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA443599 tongue, tumor tissue TRIM16andCDRT1.d 788 to 1351 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA443992 tongue, tumor tissue TRIM16andCDRT1.d 822 to 1397 2 to 577   capped   576/576
(100 %)
3 diff
(99.5 %id)
DA446249 tongue, tumor tissue TRIM16andCDRT1.a 5 to 560 2 to 557   capped   556/563
(98 %)
2 diff
(99.7 %id)
DA446569 tongue, tumor tissue TRIM16andCDRT1.g 539 to 1116 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA448015 tongue, tumor tissue TRIM16andCDRT1.d -9 to 541 2 to 552   tiling clone, capped   551/551
(100 %)
1 diff
(99.9 %id)
DA448197 tongue, tumor tissue TRIM16andCDRT1.d 1008 to 1560 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DA448394 tongue, tumor tissue TRIM16andCDRT1.d 975 to 1408 2 to 439   capped   438/439
(99 %)
3 diff
(99.4 %id)
DA448786 tongue, tumor tissue TRIM16andCDRT1.a 6 to 560 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA448815 tongue, tumor tissue TRIM16andCDRT1.d 975 to 1538 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA449708 tongue, tumor tissue TRIM16andCDRT1.a 7 to 560 2 to 556   capped   555/563
(98 %)
3 diff
(99.5 %id)
DA449939 tongue, tumor tissue TRIM16andCDRT1.d 1006 to 1574 2 to 572   capped   571/571
(100 %)
4 diff
(99.3 %id)
DA453666 tongue, tumor tissue TRIM16andCDRT1.a 7 to 597 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DA454044 tongue, tumor tissue TRIM16andCDRT1.a 5 to 548 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DA454193 tongue, tumor tissue TRIM16andCDRT1.a 6 to 596 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DA458216 tongue, tumor tissue TRIM16andCDRT1.n 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
CU455026 epidermis TRIM16andCDRT1.a 339 to 833 28 to 522       495/542
(91 %)
3 diff
(99.5 %id)
AV710772 adrenal cortico adenoma for Cushing'ssyndrome TRIM16andCDRT1.f 2872 to 3188 8 to 324   AAA   317/324
(97 %)
6 diff
(98.2 %id)
CV411129 breast_normal TRIM16andCDRT1.vh-u 119 to 452 1 to 335       335/335
(100 %)
19 diff
(94.4 %id)
DA472047   TRIM16andCDRT1.a 13 to 512 2 to 501   capped   500/500
(100 %)
0 diff
(100 %id)
DA473557   TRIM16andCDRT1.a 8 to 551 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA474200   TRIM16andCDRT1.a 6 to 573 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA474439   TRIM16andCDRT1.a 6 to 560 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA474802   TRIM16andCDRT1.d 1006 to 1576 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA479533   TRIM16andCDRT1.a 5 to 560 2 to 558   capped   557/560
(99 %)
2 diff
(99.7 %id)
DA480854   TRIM16andCDRT1.d 1006 to 1569 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BX479892   TRIM16andCDRT1.vi-u 1 to 502 1 to 501 exact tiling clone,   501/501
(100 %)
4 diff
(99.3 %id)
AL710698 human skeletal muscle TRIM16andCDRT1.a 1 to 453 5 to 457       457/457
(100 %)
12 diff
(97.4 %id)
BX476311   TRIM16andCDRT1.a 4 to 478 1 to 475       475/475
(100 %)
0 diff
(100 %id)
AL602673 human skeletal muscle TRIM16andCDRT1.a 4 to 652 1 to 649       649/649
(100 %)
0 diff
(100 %id)
DW416736 Liver TRIM16andCDRT1.d 1015 to 1313 10 to 308       299/308
(97 %)
7 diff
(97.8 %id)
DW444016.
matches multiple genes
Liver TRIM16andCDRT1.f 1995 to 2206 17 to 228     also hits gene TRIM16L 212/228
(92 %)
6 diff
(97.4 %id)
EC533211 Prostate TRIM16andCDRT1.b 2313 to 2400 6 to 94       89/94
(94 %)
5 diff
(94.7 %id)
EC562497 Prostate TRIM16andCDRT1.b 2313 to 2400 8 to 96       89/96
(92 %)
5 diff
(94.8 %id)
EC580843.
matches multiple genes
Prostate TRIM16andCDRT1.f 3088 to 3174 1 to 87     also hits gene TRIM16L 87/93
(93 %)
1 diff
(99.0 %id)
EH333686.
matches multiple genes
  TRIM16andCDRT1.a 1900 to 1951 1 to 52   tiling clone, also hits gene FBXW10 52/52
(100 %)
0 diff
(100 %id)
EL736116 mixed TRIM16andCDRT1.a 41 to 656 1 to 616       616/616
(100 %)
1 diff
(99.9 %id)
DA488345 brain TRIM16andCDRT1.k 1 to 487 2 to 488   tiling clone, capped   487/487
(100 %)
1 diff
(99.8 %id)
DA495192 brain TRIM16andCDRT1.f 18 to 592 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DA495338 brain TRIM16andCDRT1.a 5 to 570 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA500508 brain TRIM16andCDRT1.vb 1 to 568 2 to 569 exact tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DA504272 brain TRIM16andCDRT1.f 11 to 571 2 to 562   capped   561/561
(100 %)
5 diff
(99.2 %id)
DA508713 brain TRIM16andCDRT1.vg 1 to 533 5 to 538 exact tiling clone, capped   537/537
(100 %)
8 diff
(98.6 %id)
DA513685 brain TRIM16andCDRT1.d 1006 to 1583 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA518270 brain TRIM16andCDRT1.p 1 to 563 2 to 565 K25R tiling clone, capped   564/564
(100 %)
4 diff
(99.3 %id)
DA519181 brain TRIM16andCDRT1.vc 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
DA521170 brain TRIM16andCDRT1.u 1 to 522 2 to 524   tiling clone, capped   523/523
(100 %)
1 diff
(99.9 %id)
DA532082 brain TRIM16andCDRT1.k 77 to 681 2 to 607 F158V K159* tiling clone, capped   606/606
(100 %)
1 diff
(99.9 %id)
BP233081 muscle TRIM16andCDRT1.d 788 to 1369 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DB525349 testis TRIM16andCDRT1.i-u 371 to 794 1 to 424   AAA Submitted on the opposite strand 424/424
(100 %)
1 diff
(99.8 %id)
DA551627   TRIM16andCDRT1.g 560 to 1053 2 to 495   capped   494/494
(100 %)
1 diff
(99.8 %id)
DA552227   TRIM16andCDRT1.a 6 to 550 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA552763   TRIM16andCDRT1.a 5 to 567 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA554354   TRIM16andCDRT1.a 19 to 548 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DA573633   TRIM16andCDRT1.a 12 to 530 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
DA581519 lung TRIM16andCDRT1.a 6 to 560 2 to 556   capped   555/557
(99 %)
2 diff
(99.7 %id)
DA583613 lung TRIM16andCDRT1.a 5 to 591 2 to 588   capped   587/588
(99 %)
2 diff
(99.7 %id)
DA589748 lung TRIM16andCDRT1.d 790 to 1348 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA592100 lung TRIM16andCDRT1.d 979 to 1573 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
T79961 liver and spleen TRIM16andCDRT1.f 729 to 1117 393 to 1       393/429
(91 %)
13 diff
(97.0 %id)
H02259 placenta TRIM16andCDRT1.f 2757 to 3188 440 to 1       440/442
(99 %)
14 diff
(96.9 %id)
H02356 placenta TRIM16andCDRT1.f 2327 to 2692 1 to 375       375/375
(100 %)
13 diff
(96.6 %id)
H03387 placenta TRIM16andCDRT1.f 2914 to 3189 277 to 1       277/277
(100 %)
3 diff
(99.0 %id)
H04082 placenta TRIM16andCDRT1.f 2327 to 2730 1 to 403       403/403
(100 %)
4 diff
(99.1 %id)
AA004637 liver and spleen TRIM16andCDRT1.f 695 to 1115 422 to 1       422/422
(100 %)
2 diff
(99.6 %id)
AA082677   TRIM16andCDRT1.f 2034 to 2498 1 to 459       459/459
(100 %)
14 diff
(97.0 %id)
AA229163.
matches multiple genes
  TRIM16andCDRT1.f 2863 to 3118 1 to 256     also hits gene TRIM16L 256/256
(100 %)
17 diff
(93.4 %id)
AA747644 Ewing's sarcoma TRIM16andCDRT1.f 2825 to 3118 9 to 301       293/301
(97 %)
6 diff
(98.1 %id)
AA837560 epithelium (cell line), Prostate TRIM16andCDRT1.f 2764 to 3189 425 to 1       425/425
(100 %)
2 diff
(99.6 %id)
AI341532 pooled germ cell tumors TRIM16andCDRT1.vl-u 3 to 456 472 to 20 E16* tiling clone, AAA   453/453
(100 %)
8 diff
(98.3 %id)
AI539776 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus TRIM16andCDRT1.f 2781 to 3189 452 to 44   AAA   409/409
(100 %)
0 diff
(100 %id)
AI811460 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors TRIM16andCDRT1.f 2755 to 3196 442 to 1       442/442
(100 %)
0 diff
(100 %id)
AI719867.
matches multiple genes
aorta TRIM16andCDRT1.f 3027 to 3181 165 to 10     also hits gene TRIM16L 156/165
(94 %)
0 diff
(100 %id)
AI809214.
matches multiple genes
pooled TRIM16andCDRT1.i-u 314 to 795 487 to 6   tiling clone, also hits gene FBXW10 482/487
(98 %)
0 diff
(100 %id)
AW194905 Kidney TRIM16andCDRT1.i-u 371 to 794 425 to 1       425/425
(100 %)
7 diff
(98.4 %id)
AW516815 cervix, tumor TRIM16andCDRT1.vh-u 118 to 508 1 to 391 exact tiling clone, Submitted on the opposite strand 391/391
(100 %)
1 diff
(99.8 %id)
AW732527 Kidney, renal cell adenocarcinoma TRIM16andCDRT1.a 43 to 156 1 to 114       114/115
(99 %)
6 diff
(94.8 %id)
CF140646 CNCAP(3)T-225 cell line, Prostate TRIM16andCDRT1.g 600 to 1115 8 to 523       516/523
(98 %)
8 diff
(98.5 %id)
BF196490 Kidney TRIM16andCDRT1.a 656 to 1028 373 to 1       373/414
(90 %)
4 diff
(99.1 %id)
BE272706.
matches multiple genes
Kidney, renal cell adenocarcinoma TRIM16andCDRT1.g 602 to 687 1 to 86     also hits gene TRIM16L 86/86
(100 %)
0 diff
(100 %id)
BC001564 Placenta, choriocarcinoma TRIM16andCDRT1.d 1173 to 3402 1 to 2230   tiling clone, available from MGC, AAA   2230/2230
(100 %)
1 diff
(100.0 %id)
BE545882 cervical carcinoma cell line, cervix TRIM16andCDRT1.f 2650 to 3186 1 to 539       539/542
(99 %)
31 diff
(94.3 %id)
BE273600.
matches multiple genes
Kidney, renal cell adenocarcinoma TRIM16andCDRT1.g 552 to 893 1 to 342     also hits gene TRIM16L 342/563
(60 %)
1 diff
(99.9 %id)
BF031451 hypernephroma, Kidney TRIM16andCDRT1.f 1778 to 2491 1 to 714       714/720
(99 %)
31 diff
(95.7 %id)
BE868611 adenocarcinoma, colon TRIM16andCDRT1.m 18 to 592 1 to 583 F3S Q26H E47D K50Q Q51A ... tiling clone,   583/583
(100 %)
17 diff
(97.1 %id)
BF036748 adenocarcinoma, ovary TRIM16andCDRT1.f 1797 to 2479 1 to 675       675/675
(100 %)
9 diff
(98.7 %id)
BF038867 adenocarcinoma, ovary TRIM16andCDRT1.f 2026 to 2718 1 to 691       691/754
(91 %)
19 diff
(97.5 %id)
BE619213 large cell carcinoma, lung TRIM16andCDRT1.g 554 to 1151 1 to 601       601/601
(100 %)
4 diff
(99.4 %id)
BE619762 large cell carcinoma, lung TRIM16andCDRT1.f 2731 to 3138 419 to 1       419/571
(73 %)
21 diff
(96.4 %id)
BE618988 large cell carcinoma, lung TRIM16andCDRT1.d 980 to 1633 1 to 653       653/923
(70 %)
5 diff
(99.5 %id)
BE786266 large cell carcinoma, lung TRIM16andCDRT1.a 47 to 444 1 to 392       392/920
(42 %)
12 diff
(98.7 %id)
BE785694 large cell carcinoma, lung TRIM16andCDRT1.g 575 to 1156 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BE789096.
matches multiple genes
large cell carcinoma, lung TRIM16andCDRT1.g 566 to 761 1 to 197     also hits gene TRIM16L 197/197
(100 %)
2 diff
(99.0 %id)
BE788815 large cell carcinoma, lung TRIM16andCDRT1.g 573 to 1230 1 to 658       658/693
(94 %)
8 diff
(98.9 %id)
BE789166 large cell carcinoma, lung TRIM16andCDRT1.f 1833 to 2331 1 to 523       495/523
(94 %)
19 diff
(96.4 %id)
BE787610 large cell carcinoma, lung TRIM16andCDRT1.f 1832 to 2601 1 to 774       774/1039
(74 %)
41 diff
(96.1 %id)
BE884421 leiomyosarcoma, uterus TRIM16andCDRT1.d 838 to 1536 1 to 688       688/692
(99 %)
18 diff
(97.4 %id)
BE745348 adenocarcinoma cell line, ovary TRIM16andCDRT1.a 123 to 692 1 to 575       575/856
(67 %)
14 diff
(98.4 %id)
BF182998.
matches multiple genes
large cell carcinoma, lung TRIM16andCDRT1.a 560 to 628 1 to 69     also hits gene TRIM16L 69/69
(100 %)
0 diff
(100 %id)
BF687575 brain, glioblastoma TRIM16andCDRT1.a 4 to 442 1 to 438       438/443
(98 %)
11 diff
(97.6 %id)
BF540864 hypernephroma, Kidney TRIM16andCDRT1.f 2041 to 2723 1 to 679       679/762
(89 %)
23 diff
(97.0 %id)
BF310403 brain, neuroblastoma TRIM16andCDRT1.a 3 to 656 1 to 646       646/915
(70 %)
18 diff
(98.1 %id)
BG059523 brain, glioblastoma without EGFR amplification TRIM16andCDRT1.f 2734 to 3189 456 to 1       456/456
(100 %)
0 diff
(100 %id)
BF973603 leiomyosarcoma cell line, uterus TRIM16andCDRT1.f 1941 to 2742 1 to 800       800/816
(98 %)
27 diff
(96.7 %id)
BG330419 large cell carcinoma, lung TRIM16andCDRT1.a 5 to 691 1 to 683       683/683
(100 %)
7 diff
(99.0 %id)
BG333318 large cell carcinoma, lung TRIM16andCDRT1.g 555 to 1423 1 to 859       859/859
(100 %)
23 diff
(97.4 %id)
BG331358 large cell carcinoma, lung TRIM16andCDRT1.a 20 to 557 1 to 557       557/1079
(51 %)
27 diff
(97.5 %id)
BG331824.
matches multiple genes
large cell carcinoma, lung TRIM16andCDRT1.g 552 to 869 1 to 316     also hits gene TRIM16L 316/316
(100 %)
3 diff
(99.1 %id)
BG332677.
matches multiple genes
large cell carcinoma, lung TRIM16andCDRT1.g 543 to 1230 1 to 690     also hits gene TRIM16L 690/893
(77 %)
14 diff
(98.5 %id)
BG332364.
matches multiple genes
large cell carcinoma, lung TRIM16andCDRT1.g 556 to 707 1 to 151     also hits gene TRIM16L 151/151
(100 %)
1 diff
(99.4 %id)
BG337960 leiomyosarcoma cell line, uterus TRIM16andCDRT1.f 2357 to 3127 1 to 754       754/898
(83 %)
36 diff
(96.0 %id)
BG323991.
matches multiple genes
Kidney, renal cell adenocarcinoma TRIM16andCDRT1.g 577 to 707 1 to 130     also hits gene TRIM16L 130/130
(100 %)
1 diff
(99.3 %id)
BG325104 Kidney, renal cell adenocarcinoma TRIM16andCDRT1.g 562 to 1214 1 to 653       653/655
(99 %)
4 diff
(99.4 %id)
BG385448.
matches multiple genes
adenocarcinoma cell line, colon TRIM16andCDRT1.g 562 to 869 1 to 308     also hits gene TRIM16L 308/308
(100 %)
2 diff
(99.4 %id)
BG424431.
matches multiple genes
Kidney, renal cell adenocarcinoma TRIM16andCDRT1.a 560 to 790 1 to 230     also hits gene TRIM16L 230/230
(100 %)
2 diff
(99.2 %id)
BG420440.
matches multiple genes
Kidney, renal cell adenocarcinoma TRIM16andCDRT1.g 567 to 707 1 to 141     also hits gene TRIM16L 141/141
(100 %)
0 diff
(100 %id)
BG489220 large cell carcinoma, lung TRIM16andCDRT1.g 573 to 1336 1 to 767       765/767
(99 %)
11 diff
(98.6 %id)
BG489767 large cell carcinoma, lung TRIM16andCDRT1.g 553 to 984 1 to 434       434/434
(100 %)
6 diff
(98.7 %id)
BG490132.
matches multiple genes
large cell carcinoma, lung TRIM16andCDRT1.g 611 to 707 1 to 97     also hits gene TRIM16L 97/97
(100 %)
3 diff
(97.0 %id)
BG490586 large cell carcinoma, lung TRIM16andCDRT1.f 1368 to 2180 1 to 813       813/817
(99 %)
16 diff
(98.1 %id)
BG490482 large cell carcinoma, lung TRIM16andCDRT1.g 543 to 1328 1 to 786       786/788
(99 %)
1 diff
(99.9 %id)
BC015674 Lung, large cell carcinoma TRIM16andCDRT1.g 544 to 2462 1 to 1918 exact tiling clone, available from MGC, AAA   1918/1918
(100 %)
1 diff
(100.0 %id)
BG490677 large cell carcinoma, lung TRIM16andCDRT1.g 553 to 1279 1 to 730       730/730
(100 %)
6 diff
(99.2 %id)
BG468327 adenocarcinoma cell line, colon TRIM16andCDRT1.a 60 to 743 1 to 696       696/702
(99 %)
40 diff
(94.4 %id)
BG488814 large cell carcinoma, lung TRIM16andCDRT1.g 553 to 1050 1 to 522       494/722
(68 %)
34 diff
(95.3 %id)
BG677526 skin, squamous cell carcinoma TRIM16andCDRT1.f 2239 to 3074 1 to 841       841/841
(100 %)
32 diff
(96.2 %id)
BG678310 skin, squamous cell carcinoma TRIM16andCDRT1.f 2022 to 2707 1 to 687       687/687
(100 %)
3 diff
(99.6 %id)
BG697991 skin TRIM16andCDRT1.f 2143 to 3054 1 to 912       912/919
(99 %)
42 diff
(95.5 %id)
BG748536.
matches multiple genes
eye, normal pigmented retinal epithelium TRIM16andCDRT1.g 532 to 869 1 to 338     also hits gene TRIM16L 338/338
(100 %)
2 diff
(99.5 %id)
BG910973 anaplastic oligodendroglioma with 1p/19qloss, brain TRIM16andCDRT1.l-u 1 to 621 1 to 627 K5N S68R D103T K104R E105R ... tiling clone,   627/767
(81 %)
21 diff
(97.3 %id)
BI160842 epithelioid carcinoma cell line, Pancreas TRIM16andCDRT1.f 1827 to 2604 1 to 784       784/784
(100 %)
10 diff
(98.8 %id)
BI259954 cervical carcinoma cell line, cervix TRIM16andCDRT1.f 2069 to 2734 1 to 669       669/938
(71 %)
11 diff
(98.9 %id)
BI762605 pooled colon, kidney, stomach TRIM16andCDRT1.d 985 to 1676 1 to 694       694/855
(81 %)
6 diff
(99.3 %id)
BI766720 pooled lung and spleen TRIM16andCDRT1.q 28 to 820 1 to 793   tiling clone,   793/793
(100 %)
8 diff
(99.0 %id)
BM008694 adenocarcinoma, Pancreas TRIM16andCDRT1.a 9 to 802 1 to 793       793/794
(99 %)
16 diff
(98.0 %id)
BM018242 astrocytoma grade IV, cell line, brain TRIM16andCDRT1.a 40 to 488 1 to 446       446/446
(100 %)
7 diff
(98.5 %id)
BM020428 astrocytoma grade IV, cell line, brain TRIM16andCDRT1.a 40 to 829 1 to 794       794/797
(99 %)
18 diff
(97.8 %id)
BM910099.
matches multiple genes
astrocytoma grade IV, cell line, brain TRIM16andCDRT1.a 752 to 1359 9 to 616     also hits gene TRIM16L 608/1120
(54 %)
28 diff
(97.5 %id)
BM044912 carcinoma, cell line, Prostate TRIM16andCDRT1.a 5 to 760 1 to 755       755/755
(100 %)
10 diff
(98.7 %id)
BM042277 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 502 to 950 1 to 454       454/577
(78 %)
10 diff
(98.3 %id)
BM802951 duodenal adenocarcinoma, cell line, small intestine TRIM16andCDRT1.u 27 to 745 1 to 718 E101D K102N K104S E106S L107W ... tiling clone,   718/1000
(71 %)
15 diff
(98.5 %id)
BM553562 duodenal adenocarcinoma, cell line, small intestine TRIM16andCDRT1.q 23 to 544 28 to 549       522/1144
(45 %)
10 diff
(99.2 %id)
BM996898 Chondrosarcoma, Left Pubic Bone TRIM16andCDRT1.f 2587 to 3189 622 to 19   AAA   604/604
(100 %)
1 diff
(99.9 %id)
BM995848 Chondrosarcoma, Left Pubic Bone TRIM16andCDRT1.f 2490 to 3189 718 to 19   AAA   700/700
(100 %)
4 diff
(99.5 %id)
BQ005864 Chondrosarcoma, Left Pubic Bone TRIM16andCDRT1.f 1636 to 2275 684 to 45   AAA   640/660
(96 %)
2 diff
(99.7 %id)
BM996162 lung, Metastatic Chondrosarcoma TRIM16andCDRT1.f 2547 to 3189 662 to 19   tiling clone, AAA   644/644
(100 %)
1 diff
(99.9 %id)
BU185023 large cell carcinoma, lung TRIM16andCDRT1.g 548 to 1228 1 to 693       693/913
(75 %)
27 diff
(97.1 %id)
BQ217870 epithelioid carcinoma, Pancreas TRIM16andCDRT1.d 920 to 1675 1 to 762       762/924
(82 %)
11 diff
(98.9 %id)
BQ422666 large cell carcinoma, lung TRIM16andCDRT1.f 2121 to 2910 1 to 794   AAA   794/794
(100 %)
10 diff
(98.8 %id)
BQ221749 large cell carcinoma, lung TRIM16andCDRT1.f 1610 to 2476 1 to 877       877/885
(99 %)
19 diff
(97.9 %id)
BQ217778 large cell carcinoma, lung TRIM16andCDRT1.f 1440 to 2476 14 to 1059       1046/1059
(98 %)
33 diff
(96.9 %id)
BQ221334 large cell carcinoma, lung TRIM16andCDRT1.g 568 to 1426 1 to 861       861/861
(100 %)
3 diff
(99.7 %id)
BQ217722 large cell carcinoma, lung TRIM16andCDRT1.g 554 to 1391 1 to 846       846/912
(92 %)
13 diff
(98.6 %id)
BQ214657 large cell carcinoma, lung TRIM16andCDRT1.g 548 to 1230 1 to 686       686/933
(73 %)
4 diff
(99.6 %id)
BU185583 ductal carcinoma, cell line, Pancreas TRIM16andCDRT1.f 1370 to 2227 1 to 866       866/868
(99 %)
21 diff
(97.6 %id)
BQ888393 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1236 1 to 734       734/892
(82 %)
6 diff
(99.4 %id)
BQ877983 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1328 1 to 831       831/865
(96 %)
14 diff
(98.4 %id)
BU190290 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1296 1 to 794       796/914
(87 %)
20 diff
(97.9 %id)
BQ896972 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1400 1 to 895       895/895
(100 %)
6 diff
(99.4 %id)
BU167981 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1417 1 to 919       919/920
(99 %)
12 diff
(98.7 %id)
BU183487 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1390 1 to 892       892/892
(100 %)
6 diff
(99.4 %id)
BU166586 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1277 1 to 777       779/963
(80 %)
9 diff
(99.1 %id)
BU173989 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1275 1 to 774       774/880
(87 %)
4 diff
(99.6 %id)
BU185644 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 506 to 1320 37 to 853       817/909
(89 %)
28 diff
(97.0 %id)
BU838716 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1285 1 to 782       782/906
(86 %)
6 diff
(99.4 %id)
BQ684075 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1266 1 to 763       765/921
(83 %)
24 diff
(97.4 %id)
BQ682067 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1361 1 to 860       860/926
(92 %)
24 diff
(97.5 %id)
BQ679630 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1154 1 to 652       652/935
(69 %)
16 diff
(98.3 %id)
BQ677556 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1287 1 to 785       785/937
(83 %)
16 diff
(98.3 %id)
BQ676752 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1421 1 to 945       945/950
(99 %)
48 diff
(95.0 %id)
BQ682239 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1291 1 to 792       792/996
(79 %)
31 diff
(96.9 %id)
BQ678762 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1315 1 to 819       821/844
(97 %)
19 diff
(97.8 %id)
BU839364 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 519 to 1187 1 to 671       671/974
(68 %)
8 diff
(99.2 %id)
BQ676466 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1360 1 to 866       868/933
(93 %)
28 diff
(97.0 %id)
BQ676674 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1156 1 to 659       659/1072
(61 %)
21 diff
(98.1 %id)
BQ678744 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1318 1 to 821       823/947
(86 %)
33 diff
(96.6 %id)
BQ680254 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1432 1 to 931       933/937
(99 %)
24 diff
(97.5 %id)
BU185471 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1311 1 to 811       811/940
(86 %)
16 diff
(98.3 %id)
BU190950 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 506 to 1312 34 to 839       806/981
(82 %)
17 diff
(98.3 %id)
BQ681547 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 504 to 1371 1 to 874       876/934
(93 %)
31 diff
(96.7 %id)
BQ676979 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 505 to 1154 1 to 664       664/908
(73 %)
32 diff
(96.5 %id)
BQ682787 melanotic melanoma, cell line, skin TRIM16andCDRT1.d 506 to 1413 22 to 939       918/948
(96 %)
35 diff
(96.4 %id)
BQ949192 large cell carcinoma, lung TRIM16andCDRT1.g 549 to 1367 1 to 829       829/866
(95 %)
19 diff
(97.9 %id)
BQ924672 large cell carcinoma, lung TRIM16andCDRT1.g 552 to 1435 23 to 922       900/925
(97 %)
36 diff
(96.2 %id)
BU152551 carcinoma, cell line, Prostate TRIM16andCDRT1.a 26 to 887 1 to 871       871/921
(94 %)
18 diff
(98.1 %id)
BQ957024 carcinoma, cell line, Prostate TRIM16andCDRT1.a 26 to 898 1 to 872       872/913
(95 %)
13 diff
(98.6 %id)
BQ925303 large cell carcinoma, lung TRIM16andCDRT1.g 536 to 1470 13 to 947       935/952
(98 %)
12 diff
(98.8 %id)
BQ918457 large cell carcinoma, lung TRIM16andCDRT1.f 1792 to 2701 1 to 905       905/905
(100 %)
14 diff
(98.5 %id)
BQ940000 epidermoid carcinoma, cell line, lung TRIM16andCDRT1.f 1834 to 2732 1 to 901       901/901
(100 %)
14 diff
(98.5 %id)
BU539033 adenocarcinoma, cell line, breast TRIM16andCDRT1.a 407 to 931 1 to 526       526/1361
(38 %)
17 diff
(98.8 %id)
BU859801 adenocarcinoma, cell line, breast TRIM16andCDRT1.a 407 to 1240 1 to 843       841/918
(91 %)
19 diff
(98.0 %id)
CX166651 human embryonic stem cells differentiated toan early endodermal cell type TRIM16andCDRT1.r 1 to 803 1 to 803 exact tiling clone,   803/803
(100 %)
1 diff
(99.9 %id)
CX166521 human embryonic stem cells differentiated toan early endodermal cell type TRIM16andCDRT1.f 1970 to 2748 1 to 779       779/779
(100 %)
1 diff
(99.9 %id)
BC143291 Colon, PCR rescued clones TRIM16andCDRT1.c 1639 to 2438 1 to 800   tiling clone,   800/800
(100 %)
3 diff
(99.7 %id)
BC171723 Colon, PCR rescued clones TRIM16andCDRT1.o 1 to 562 1 to 562 H4R tiling clone,   562/562
(100 %)
3 diff
(99.5 %id)
CB989113 Human Placenta, placenta TRIM16andCDRT1.e 622 to 1318 27 to 728   tiling clone,   702/747
(93 %)
18 diff
(97.6 %id)
CF593769 Human Placenta, placenta TRIM16andCDRT1.e 622 to 1198 28 to 611       584/847
(68 %)
26 diff
(97.0 %id)
CF994774 Human Placenta, placenta TRIM16andCDRT1.e 622 to 1322 27 to 727   tiling clone,   701/731
(95 %)
11 diff
(98.5 %id)
CF131923 Chondrosarcoma Lung Metastasis cell lines, lung TRIM16andCDRT1.a 10 to 721 1 to 712       712/712
(100 %)
0 diff
(100 %id)
TI_57150503   TRIM16andCDRT1.d 980 to 1676 26 to 724       699/885
(78 %)
9 diff
(99.0 %id)
TI_57180775   TRIM16andCDRT1.q 27 to 820 28 to 821       794/821
(96 %)
11 diff
(98.7 %id)
TI_59386403   TRIM16andCDRT1.a 10 to 802 62 to 853       792/793
(99 %)
15 diff
(98.2 %id)
TI_59388827   TRIM16andCDRT1.a 40 to 488 117 to 562       446/446
(100 %)
7 diff
(98.5 %id)
TI_59391213   TRIM16andCDRT1.a 40 to 829 102 to 895       794/797
(99 %)
18 diff
(97.8 %id)
BP272258   TRIM16andCDRT1.a 2 to 549 1 to 550       550/550
(100 %)
20 diff
(96.4 %id)
BP278058   TRIM16andCDRT1.d 978 to 1560 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP280480   TRIM16andCDRT1.a 5 to 615 1 to 611       611/611
(100 %)
2 diff
(99.7 %id)
BP280511   TRIM16andCDRT1.a 3 to 636 1 to 634       634/634
(100 %)
1 diff
(99.9 %id)
CB107653 Liver TRIM16andCDRT1.g 547 to 912 1 to 366       366/366
(100 %)
0 diff
(100 %id)
CB115352 Liver TRIM16andCDRT1.f 1855 to 2460 2 to 607       606/607
(99 %)
0 diff
(100 %id)
CB109494.
matches multiple genes
Liver TRIM16andCDRT1.f 3039 to 3190 1 to 152     also hits gene TRIM16L 152/168
(90 %)
2 diff
(98.9 %id)
CB144115 Liver TRIM16andCDRT1.a 599 to 978 1 to 380       380/380
(100 %)
0 diff
(100 %id)
D45542 lung TRIM16andCDRT1.f 2945 to 3190 1 to 246     Submitted on the opposite strand 246/248
(99 %)
3 diff
(98.8 %id)
BP292337 lung TRIM16andCDRT1.a 5 to 583 1 to 581       581/581
(100 %)
7 diff
(98.8 %id)
DA649763   TRIM16andCDRT1.a 6 to 554 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA653318   TRIM16andCDRT1.d 1006 to 1601 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA655981   TRIM16andCDRT1.a 6 to 560 2 to 557   capped   556/563
(98 %)
2 diff
(99.7 %id)
DA658361   TRIM16andCDRT1.q 8 to 565 2 to 560   capped   559/559
(100 %)
7 diff
(98.8 %id)
DA665985   TRIM16andCDRT1.a 6 to 559 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA667723 esophagus TRIM16andCDRT1.d 948 to 1485 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DC364984.
matches multiple genes
esophagus TRIM16andCDRT1.g 523 to 874 1 to 352     also hits gene TRIM16L 352/352
(100 %)
2 diff
(99.5 %id)
DA678356   TRIM16andCDRT1.a 6 to 712 2 to 708   capped   707/715
(98 %)
2 diff
(99.8 %id)
NM_006382.3   TRIM16andCDRT1.b 676 to 2740 698 to 2762 exact RefSeq, AAA   2762/2762
(100 %)
0 diff
(100 %id)
NM_006470.3   TRIM16andCDRT1.d 503 to 3402 1 to 2900 exact RefSeq, AAA   2900/2900
(100 %)
0 diff
(100 %id)
DA683926   TRIM16andCDRT1.f 10 to 521 2 to 513   capped   512/512
(100 %)
5 diff
(99.1 %id)
DB322814   TRIM16andCDRT1.f 2675 to 3196 524 to 1       524/524
(100 %)
2 diff
(99.7 %id)
DA692323   TRIM16andCDRT1.g 537 to 1115 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA701736   TRIM16andCDRT1.g 522 to 1038 2 to 520   capped   519/524
(99 %)
4 diff
(99.3 %id)
DA703280   TRIM16andCDRT1.d 1006 to 1545 2 to 541   capped   540/543
(99 %)
1 diff
(99.9 %id)
DA709087   TRIM16andCDRT1.a 5 to 530 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DA709639   TRIM16andCDRT1.va 167 to 714 2 to 551 exact tiling clone, capped   550/550
(100 %)
2 diff
(99.7 %id)
DA711403   TRIM16andCDRT1.d 1006 to 1567 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA713703   TRIM16andCDRT1.a 6 to 562 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA713949   TRIM16andCDRT1.d 947 to 1510 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA716541   TRIM16andCDRT1.d 857 to 1401 2 to 546   capped   545/546
(99 %)
1 diff
(99.9 %id)
AU150250   TRIM16andCDRT1.d 3015 to 3408 394 to 1   tiling clone,   394/399
(98 %)
4 diff
(99.0 %id)
DA733081   TRIM16andCDRT1.d 849 to 1331 2 to 484   capped   483/483
(100 %)
3 diff
(99.4 %id)
AU152317   TRIM16andCDRT1.d 2850 to 3402 553 to 1       553/556
(99 %)
4 diff
(99.3 %id)
DA735310   TRIM16andCDRT1.d 971 to 1742 2 to 775   capped   774/774
(100 %)
5 diff
(99.4 %id)
DA750545   TRIM16andCDRT1.q 10 to 573 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA759630   TRIM16andCDRT1.vk 1 to 461 2 to 462 exact tiling clone, capped   461/461
(100 %)
1 diff
(99.8 %id)
DA759729   TRIM16andCDRT1.f 17 to 348 2 to 333   tiling clone, capped   332/332
(100 %)
0 diff
(100 %id)
DA764220 tongue TRIM16andCDRT1.d 1006 to 1579 2 to 575   capped   574/577
(99 %)
3 diff
(99.5 %id)
DA764955 tongue TRIM16andCDRT1.a 5 to 560 2 to 557   capped   556/563
(98 %)
2 diff
(99.7 %id)
DA778058 brain TRIM16andCDRT1.f 2 to 563 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DA789999 brain TRIM16andCDRT1.va 1 to 531 2 to 536   tiling clone, capped   535/535
(100 %)
7 diff
(98.7 %id)
CV574669 cornea, eye TRIM16andCDRT1.a 19 to 641 1 to 623       623/623
(100 %)
0 diff
(100 %id)
DA815565   TRIM16andCDRT1.q 11 to 591 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA821800 pericardium TRIM16andCDRT1.d 1009 to 1566 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA826035 pericardium TRIM16andCDRT1.g 574 to 1131 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA827499 pericardium TRIM16andCDRT1.vj 1 to 462 2 to 463 exact tiling clone, capped   462/462
(100 %)
0 diff
(100 %id)
AU137829 placenta TRIM16andCDRT1.d 1038 to 1598 2 to 563   capped   562/566
(99 %)
3 diff
(99.5 %id)
AU157333 placenta TRIM16andCDRT1.d 3036 to 3397 367 to 6       362/367
(98 %)
0 diff
(100 %id)
DA835161 placenta TRIM16andCDRT1.a 40 to 590 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA837053 placenta TRIM16andCDRT1.a 6 to 560 2 to 556   capped   555/557
(99 %)
2 diff
(99.7 %id)
DA840265 placenta TRIM16andCDRT1.a 8 to 559 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA847881 placenta TRIM16andCDRT1.a 8 to 560 2 to 554   capped   553/566
(97 %)
4 diff
(99.3 %id)
DA847951 placenta TRIM16andCDRT1.a 527 to 1099 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA864957 placenta TRIM16andCDRT1.f 17 to 571 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DA867486 Prostate TRIM16andCDRT1.q 12 to 547 2 to 538   capped   537/538
(99 %)
5 diff
(99.1 %id)
DA867889 Prostate TRIM16andCDRT1.d 1006 to 1554 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA871108 Prostate TRIM16andCDRT1.k 15 to 584 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA883545   TRIM16andCDRT1.f 2 to 572 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA886503   TRIM16andCDRT1.a 134 to 661 2 to 529   capped   528/528
(100 %)
3 diff
(99.5 %id)
DA887176   TRIM16andCDRT1.d 1008 to 1558 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
BM742645 Ascites, stomach TRIM16andCDRT1.a 7 to 545 1 to 538       538/538
(100 %)
1 diff
(99.9 %id)
BM763756 Ascites, stomach TRIM16andCDRT1.a 7 to 712 1 to 706       706/706
(100 %)
0 diff
(100 %id)
BM764521 Ascites, stomach TRIM16andCDRT1.a 7 to 622 1 to 616       616/616
(100 %)
0 diff
(100 %id)
BM772565 Ascites, stomach TRIM16andCDRT1.a 7 to 699 1 to 693       693/693
(100 %)
0 diff
(100 %id)
BM773206 Ascites, stomach TRIM16andCDRT1.a 7 to 485 1 to 479       479/479
(100 %)
0 diff
(100 %id)
BM772725 Ascites, stomach TRIM16andCDRT1.a 7 to 666 1 to 660       660/660
(100 %)
0 diff
(100 %id)
BM739527 stomach TRIM16andCDRT1.f 2518 to 2959 1 to 442       442/442
(100 %)
5 diff
(98.9 %id)
BM751584 Ascites, stomach TRIM16andCDRT1.a 5 to 412 1 to 411       411/411
(100 %)
12 diff
(97.1 %id)
BM750664 Ascites, stomach TRIM16andCDRT1.d 960 to 1523 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
BM750881 Ascites, stomach TRIM16andCDRT1.d 904 to 1042 1 to 139       139/139
(100 %)
0 diff
(100 %id)
BM750423 Ascites, stomach TRIM16andCDRT1.d 970 to 1525 1 to 556       556/556
(100 %)
1 diff
(99.9 %id)
BM763193 myeloma TRIM16andCDRT1.d 950 to 1566 1 to 617       617/617
(100 %)
1 diff
(99.9 %id)
BM846726 myeloma TRIM16andCDRT1.d 950 to 1566 1 to 616       616/616
(100 %)
3 diff
(99.6 %id)
BM847131 myeloma TRIM16andCDRT1.d 950 to 1429 1 to 480       480/480
(100 %)
6 diff
(98.8 %id)
BM794887 Ascites, stomach TRIM16andCDRT1.d 915 to 1531 1 to 617       617/617
(100 %)
0 diff
(100 %id)
TI_1948149926.
matches multiple genes
  TRIM16andCDRT1.b 170 to 990 133 to 956   tiling clone, also hits gene FBXW10 824/1393
(59 %)
26 diff
(98.2 %id)
TI_1948149927.
matches multiple genes
  TRIM16andCDRT1.e 1 to 983 128 to 1121   tiling clone, also hits gene FBXW10 994/1367
(72 %)
73 diff
(94.7 %id)
TI_1948150540.
matches multiple genes
  TRIM16andCDRT1.e 1 to 983 125 to 1099   tiling clone, also hits gene FBXW10 975/1367
(71 %)
49 diff
(96.5 %id)
TI_1948236648   TRIM16andCDRT1.a 41 to 846 126 to 937       812/1369
(59 %)
35 diff
(97.5 %id)
TI_1948236995   TRIM16andCDRT1.f 2146 to 2540 1003 to 605     Submitted on the opposite strand 399/1439
(27 %)
0 diff
(100 %id)
DA893609 skeletal muscle TRIM16andCDRT1.a 6 to 581 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA914442   TRIM16andCDRT1.j 1 to 551 2 to 553 R48X K49E L50T K51Q L52V ... tiling clone, capped   552/552
(100 %)
1 diff
(99.9 %id)
DA933616 Spleen TRIM16andCDRT1.a 300 to 751 2 to 453   capped   452/452
(100 %)
1 diff
(99.8 %id)
DA937514 Spleen TRIM16andCDRT1.g 1 to 565 2 to 571   tiling clone, capped   570/570
(100 %)
6 diff
(99.0 %id)
DB332935 Spleen TRIM16andCDRT1.g 1913 to 2462 551 to 1   tiling clone,   551/551
(100 %)
1 diff
(99.9 %id)
DA984500 synovial membrane tissue from rheumatioidarthritis TRIM16andCDRT1.d 1006 to 1570 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
BP351314   TRIM16andCDRT1.a 4 to 585 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BP353572   TRIM16andCDRT1.d 787 to 1370 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DN997877 breast cancer, Mammary gland (cancer tissue) TRIM16andCDRT1.a 12 to 314 12 to 314       303/314
(96 %)
6 diff
(98.1 %id)
DB007916 cervix, tumor tissue TRIM16andCDRT1.d 937 to 1505 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DB011739 esophageal, tumor tissue TRIM16andCDRT1.g 536 to 1102 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DB011757 esophageal, tumor tissue TRIM16andCDRT1.g 522 to 1087 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB011904 esophageal, tumor tissue TRIM16andCDRT1.g 559 to 1105 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB012241 esophageal, tumor tissue TRIM16andCDRT1.a 5 to 573 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB012381 esophageal, tumor tissue TRIM16andCDRT1.g 524 to 985 2 to 464   capped   463/463
(100 %)
1 diff
(99.8 %id)
DB012425 esophageal, tumor tissue TRIM16andCDRT1.g 524 to 1022 2 to 501   capped   500/500
(100 %)
2 diff
(99.6 %id)
DC393878.
matches multiple genes
esophageal, tumor tissue TRIM16andCDRT1.g 425 to 910 1 to 487     also hits gene TRIM16L 487/487
(100 %)
2 diff
(99.6 %id)
DB013422 esophageal, tumor tissue TRIM16andCDRT1.d 975 to 1553 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB013859 esophageal, tumor tissue TRIM16andCDRT1.g 522 to 1093 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB015127 esophageal, tumor tissue TRIM16andCDRT1.a 6 to 571 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DC394098.
matches multiple genes
esophageal, tumor tissue TRIM16andCDRT1.g 535 to 1030 1 to 498     also hits gene TRIM16L 498/498
(100 %)
9 diff
(98.2 %id)
DB015617 esophageal, tumor tissue TRIM16andCDRT1.g 524 to 1050 2 to 530   capped   529/529
(100 %)
3 diff
(99.5 %id)
DB017194 esophageal, tumor tissue TRIM16andCDRT1.a 6 to 526 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DB017548 esophageal, tumor tissue TRIM16andCDRT1.g 524 to 1070 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB017912 esophageal, tumor tissue TRIM16andCDRT1.g 522 to 1090 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB018559 esophageal, tumor tissue TRIM16andCDRT1.g 541 to 1101 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB018609 esophageal, tumor tissue TRIM16andCDRT1.m 1 to 579 2 to 580   tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
DB018725 esophageal, tumor tissue TRIM16andCDRT1.g 559 to 1056 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
DB336082 testis TRIM16andCDRT1.c 1552 to 2077 527 to 1   tiling clone,   527/527
(100 %)
2 diff
(99.7 %id)
DB059794.
matches multiple genes
testis TRIM16andCDRT1.b 1 to 519 2 to 520   tiling clone, capped also hits gene FBXW10 519/519
(100 %)
5 diff
(99.1 %id)
DB080156.
matches multiple genes
testis TRIM16andCDRT1.b 1 to 571 9 to 578   tiling clone, capped also hits gene FBXW10 577/577
(100 %)
5 diff
(99.2 %id)
DB088227 testis TRIM16andCDRT1.s 1 to 560 2 to 561 exact tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
DB101116 thymus TRIM16andCDRT1.d 993 to 1518 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DB342308 thymus TRIM16andCDRT1.d 2898 to 3402 505 to 1       505/505
(100 %)
0 diff
(100 %id)
DB118984 thymus TRIM16andCDRT1.a 754 to 1302 2 to 550   capped   549/549
(100 %)
9 diff
(98.4 %id)
DB126250 thymus TRIM16andCDRT1.a 5 to 574 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
TI_154171155   TRIM16andCDRT1.g 600 to 1154 80 to 634       555/556
(99 %)
4 diff
(99.3 %id)
TI_159677628   TRIM16andCDRT1.a 10 to 1018 51 to 1037       989/1060
(93 %)
24 diff
(97.8 %id)
DB190640 lung, tumor tissue TRIM16andCDRT1.a 484 to 1046 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB198245 trachea TRIM16andCDRT1.g 594 to 1177 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB205565 trachea TRIM16andCDRT1.d 966 to 1513 21 to 570   capped   550/569
(96 %)
6 diff
(99.0 %id)
DB209491 trachea TRIM16andCDRT1.a 6 to 492 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
DB209994 trachea TRIM16andCDRT1.d 1006 to 1564 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB212079 trachea TRIM16andCDRT1.d 788 to 1317 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DB242303 stomach, tumor tissue TRIM16andCDRT1.g 559 to 1070 2 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
U65652 heart and skeletal muscle TRIM16andCDRT1.h 1 to 1281 11 to 1293 L119P V128I D134N F143L N144H tiling clone, AAA   1283/1293
(99 %)
21 diff
(98.4 %id)
BM712658 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.b 1851 to 2207 1 to 356   tiling clone, fully sequenced,   356/356
(100 %)
3 diff
(99.2 %id)
BU738380 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.b 2146 to 2740 613 to 19   tiling clone, fully sequenced, AAA   595/595
(100 %)
2 diff
(99.7 %id)
BM727448 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.ve 1 to 559 1 to 559 Q34H tiling clone,   559/559
(100 %)
1 diff
(99.9 %id)
BM723278 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.d 918 to 1563 1 to 646       646/648
(99 %)
2 diff
(99.7 %id)
BQ774415.
matches multiple genes
Chondrosarcoma Grade II, Left Pelvis TRIM16andCDRT1.i-u 134 to 794 678 to 19   tiling clone, AAA also hits gene FBXW10 660/660
(100 %)
5 diff
(99.3 %id)
TI_151728711   TRIM16andCDRT1.a 140 to 868 758 to 33       726/762
(95 %)
4 diff
(99.5 %id)
DC420007.
matches multiple genes
uterus TRIM16andCDRT1.g 503 to 1065 1 to 563     also hits gene TRIM16L 563/563
(100 %)
3 diff
(99.5 %id)
DB255819 uterus TRIM16andCDRT1.f 12 to 573 2 to 563   capped   562/562
(100 %)
6 diff
(99.0 %id)
DC420898.
matches multiple genes
uterus TRIM16andCDRT1.g 524 to 1070 1 to 548     also hits gene TRIM16L 548/548
(100 %)
4 diff
(99.3 %id)
BP380980   TRIM16andCDRT1.a 5 to 657 1 to 653       653/653
(100 %)
9 diff
(98.7 %id)
AK057407 testis TRIM16andCDRT1.b 676 to 2740 698 to 2762   RefSeq, available from FLJ, Suspected internal deletion, this clone was ignored 2762/2762
(100 %)
0 diff
(100 %id)
AW891009 nervous_tumor TRIM16andCDRT1.d 503 to 3402 1 to 2900   RefSeq, This clone was ignored 2900/2900
(100 %)
0 diff
(100 %id)
BE185030 head_neck TRIM16andCDRT1.f 10 to 521 2 to 513     This clone was ignored 512/512
(100 %)
5 diff
(99.1 %id)
BF808666 colon_ins TRIM16andCDRT1.f 2675 to 3196 524 to 1       524/524
(100 %)
2 diff
(99.7 %id)
F11396 brain, total brain TRIM16andCDRT1.g 537 to 1115 2 to 581     This clone was ignored 580/580
(100 %)
1 diff
(99.9 %id)
DB459905.
matches multiple genes
testis TRIM16andCDRT1.g 522 to 1038 2 to 520     also hits gene FBXW10 519/524
(99 %)
4 diff
(99.3 %id)
DB459905.
matches multiple genes
testis TRIM16andCDRT1.d 1006 to 1545 2 to 541     also hits gene FBXW10 540/543
(99 %)
1 diff
(99.9 %id)
BF508479.
matches multiple genes
  TRIM16andCDRT1.a 5 to 530 2 to 527   AAA Suspected internal deletion, internal priming: the 3' end of the oligo dt primed clone lies in the CDS, this clone was ignored, also hits gene zuloy 526/526
(100 %)
1 diff
(99.9 %id)
BF508479.
matches multiple genes
  TRIM16andCDRT1.va 167 to 714 2 to 551   tiling clone, AAA Suspected internal deletion, internal priming: the 3' end of the oligo dt primed clone lies in the CDS, this clone was ignored, also hits gene zuloy 550/550
(100 %)
2 diff
(99.7 %id)
BE786924.
matches multiple genes
large cell carcinoma, lung TRIM16andCDRT1.d 1006 to 1567 2 to 563     Suspected internal deletion, this clone was ignored, also hits gene zuloy 562/562
(100 %)
0 diff
(100 %id)
BE786924.
matches multiple genes
large cell carcinoma, lung TRIM16andCDRT1.a 6 to 562 2 to 558     Suspected internal deletion, this clone was ignored, also hits gene zuloy 557/557
(100 %)
0 diff
(100 %id)
BG721464.
matches multiple genes
testis TRIM16andCDRT1.d 947 to 1510 2 to 565     also hits gene FBXW10 564/564
(100 %)
0 diff
(100 %id)
BG721464.
matches multiple genes
testis TRIM16andCDRT1.d 857 to 1401 2 to 546     also hits gene FBXW10 545/546
(99 %)
1 diff
(99.9 %id)
BI461612.
matches multiple genes
testis TRIM16andCDRT1.d 3015 to 3408 394 to 1   tiling clone, also hits gene FBXW10 394/399
(98 %)
4 diff
(99.0 %id)
BI461612.
matches multiple genes
testis TRIM16andCDRT1.d 849 to 1331 2 to 484     also hits gene FBXW10 483/483
(100 %)
3 diff
(99.4 %id)
AV763721.
matches multiple genes
bone marrow TRIM16andCDRT1.d 2850 to 3402 553 to 1     Suspected internal deletion, this clone was ignored, also hits gene zuloy 553/556
(99 %)
4 diff
(99.3 %id)
AV763721.
matches multiple genes
bone marrow TRIM16andCDRT1.d 971 to 1742 2 to 775     Suspected internal deletion, this clone was ignored, also hits gene zuloy 774/774
(100 %)
5 diff
(99.4 %id)
DB025353 testis TRIM16andCDRT1.q 10 to 573 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DB026104 testis TRIM16andCDRT1.vk 1 to 461 2 to 462   tiling clone, capped   461/461
(100 %)
1 diff
(99.8 %id)
DB049449 testis TRIM16andCDRT1.f 17 to 348 2 to 333   tiling clone, capped   332/332
(100 %)
0 diff
(100 %id)
DB053421 testis TRIM16andCDRT1.d 1006 to 1579 2 to 575   capped   574/577
(99 %)
3 diff
(99.5 %id)
DB070600.
matches multiple genes
testis TRIM16andCDRT1.a 5 to 560 2 to 557   capped also hits gene FBXW10 556/563
(98 %)
2 diff
(99.7 %id)
DB070600.
matches multiple genes
testis TRIM16andCDRT1.f 2 to 563 2 to 563   capped also hits gene FBXW10 562/562
(100 %)
3 diff
(99.5 %id)
DB071133 testis TRIM16andCDRT1.va 1 to 531 2 to 536   tiling clone, capped   535/535
(100 %)
7 diff
(98.7 %id)
DB085097.
matches multiple genes
testis TRIM16andCDRT1.a 19 to 641 1 to 623   capped also hits gene FBXW10 623/623
(100 %)
0 diff
(100 %id)
DB085097.
matches multiple genes
testis TRIM16andCDRT1.a 19 to 641 1 to 623   capped also hits gene FBXW10 623/623
(100 %)
0 diff
(100 %id)
DB086882.
matches multiple genes
testis TRIM16andCDRT1.q 11 to 591 2 to 582   capped also hits gene FBXW10 581/581
(100 %)
2 diff
(99.7 %id)
DB086882.
matches multiple genes
testis TRIM16andCDRT1.d 1009 to 1566 2 to 559   capped also hits gene FBXW10 558/558
(100 %)
0 diff
(100 %id)
DB099478 testis TRIM16andCDRT1.g 574 to 1131 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
U43383 brain TRIM16andCDRT1.vj 1 to 462 2 to 463   tiling clone, Suspected internal deletion, suspected internal deletion, this clone was ignored 462/462
(100 %)
0 diff
(100 %id)
AU137829 placenta TRIM16andCDRT1.d 1038 to 1598 2 to 563   capped   562/566
(99 %)
3 diff
(99.5 %id)
AU157333 placenta TRIM16andCDRT1.d 3036 to 3397 367 to 6       362/367
(98 %)
0 diff
(100 %id)
DA835161 placenta TRIM16andCDRT1.a 40 to 590 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA837053 placenta TRIM16andCDRT1.a 6 to 560 2 to 556   capped   555/557
(99 %)
2 diff
(99.7 %id)
DA840265 placenta TRIM16andCDRT1.a 8 to 559 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA847881 placenta TRIM16andCDRT1.a 8 to 560 2 to 554   capped   553/566
(97 %)
4 diff
(99.3 %id)
DA847951 placenta TRIM16andCDRT1.a 527 to 1099 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA864957 placenta TRIM16andCDRT1.f 17 to 571 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DA867486 Prostate TRIM16andCDRT1.q 12 to 547 2 to 538   capped   537/538
(99 %)
5 diff
(99.1 %id)
DA867889 Prostate TRIM16andCDRT1.d 1006 to 1554 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA871108 Prostate TRIM16andCDRT1.k 15 to 584 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA883545   TRIM16andCDRT1.f 2 to 572 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA886503   TRIM16andCDRT1.a 134 to 661 2 to 529   capped   528/528
(100 %)
3 diff
(99.5 %id)
DA887176   TRIM16andCDRT1.d 1008 to 1558 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
BM742645 Ascites, stomach TRIM16andCDRT1.a 7 to 545 1 to 538       538/538
(100 %)
1 diff
(99.9 %id)
BM742645 Ascites, stomach TRIM16andCDRT1.a 7 to 545 1 to 538       538/538
(100 %)
1 diff
(99.9 %id)
BM763756 Ascites, stomach TRIM16andCDRT1.a 7 to 712 1 to 706       706/706
(100 %)
0 diff
(100 %id)
BM763756 Ascites, stomach TRIM16andCDRT1.a 7 to 712 1 to 706       706/706
(100 %)
0 diff
(100 %id)
BM764521 Ascites, stomach TRIM16andCDRT1.a 7 to 622 1 to 616       616/616
(100 %)
0 diff
(100 %id)
BM764521 Ascites, stomach TRIM16andCDRT1.a 7 to 622 1 to 616       616/616
(100 %)
0 diff
(100 %id)
BM772565 Ascites, stomach TRIM16andCDRT1.a 7 to 699 1 to 693       693/693
(100 %)
0 diff
(100 %id)
BM772565 Ascites, stomach TRIM16andCDRT1.a 7 to 699 1 to 693       693/693
(100 %)
0 diff
(100 %id)
BM773206 Ascites, stomach TRIM16andCDRT1.a 7 to 485 1 to 479       479/479
(100 %)
0 diff
(100 %id)
BM773206 Ascites, stomach TRIM16andCDRT1.a 7 to 485 1 to 479       479/479
(100 %)
0 diff
(100 %id)
BM772725 Ascites, stomach TRIM16andCDRT1.a 7 to 666 1 to 660       660/660
(100 %)
0 diff
(100 %id)
BM772725 Ascites, stomach TRIM16andCDRT1.a 7 to 666 1 to 660       660/660
(100 %)
0 diff
(100 %id)
BM739527 stomach TRIM16andCDRT1.f 2518 to 2959 1 to 442       442/442
(100 %)
5 diff
(98.9 %id)
BM751584 Ascites, stomach TRIM16andCDRT1.a 5 to 412 1 to 411       411/411
(100 %)
12 diff
(97.1 %id)
BM751584 Ascites, stomach TRIM16andCDRT1.a 5 to 412 1 to 411       411/411
(100 %)
12 diff
(97.1 %id)
BM750664 Ascites, stomach TRIM16andCDRT1.d 960 to 1523 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
BM750664 Ascites, stomach TRIM16andCDRT1.d 960 to 1523 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
BM750881 Ascites, stomach TRIM16andCDRT1.d 904 to 1042 1 to 139       139/139
(100 %)
0 diff
(100 %id)
BM750881 Ascites, stomach TRIM16andCDRT1.d 904 to 1042 1 to 139       139/139
(100 %)
0 diff
(100 %id)
BM750423 Ascites, stomach TRIM16andCDRT1.d 970 to 1525 1 to 556       556/556
(100 %)
1 diff
(99.9 %id)
BM750423 Ascites, stomach TRIM16andCDRT1.d 970 to 1525 1 to 556       556/556
(100 %)
1 diff
(99.9 %id)
BM763193 myeloma TRIM16andCDRT1.d 950 to 1566 1 to 617       617/617
(100 %)
1 diff
(99.9 %id)
BM846726 myeloma TRIM16andCDRT1.d 950 to 1566 1 to 616       616/616
(100 %)
3 diff
(99.6 %id)
BM847131 myeloma TRIM16andCDRT1.d 950 to 1429 1 to 480       480/480
(100 %)
6 diff
(98.8 %id)
BM794887 Ascites, stomach TRIM16andCDRT1.d 915 to 1531 1 to 617       617/617
(100 %)
0 diff
(100 %id)
BM794887 Ascites, stomach TRIM16andCDRT1.d 915 to 1531 1 to 617       617/617
(100 %)
0 diff
(100 %id)
TI_1948149926.
matches multiple genes
  TRIM16andCDRT1.b 170 to 990 133 to 956   tiling clone, also hits gene FBXW10 824/1393
(59 %)
26 diff
(98.2 %id)
TI_1948149927.
matches multiple genes
  TRIM16andCDRT1.e 1 to 983 128 to 1121   tiling clone, also hits gene FBXW10 994/1367
(72 %)
73 diff
(94.7 %id)
TI_1948150540.
matches multiple genes
  TRIM16andCDRT1.e 1 to 983 125 to 1099   tiling clone, also hits gene FBXW10 975/1367
(71 %)
49 diff
(96.5 %id)
TI_1948236648   TRIM16andCDRT1.a 41 to 846 126 to 937       812/1369
(59 %)
35 diff
(97.5 %id)
TI_1948236995   TRIM16andCDRT1.f 2146 to 2540 1003 to 605     Submitted on the opposite strand 399/1439
(27 %)
0 diff
(100 %id)
DA893609 skeletal muscle TRIM16andCDRT1.a 6 to 581 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA914442   TRIM16andCDRT1.j 1 to 551 2 to 553 R48X K49E L50T K51Q L52V ... tiling clone, capped   552/552
(100 %)
1 diff
(99.9 %id)
DA933616 Spleen TRIM16andCDRT1.a 300 to 751 2 to 453   capped   452/452
(100 %)
1 diff
(99.8 %id)
DA937514 Spleen TRIM16andCDRT1.g 1 to 565 2 to 571   tiling clone, capped   570/570
(100 %)
6 diff
(99.0 %id)
DB332935 Spleen TRIM16andCDRT1.g 1913 to 2462 551 to 1   tiling clone,   551/551
(100 %)
1 diff
(99.9 %id)
DA984500 synovial membrane tissue from rheumatioidarthritis TRIM16andCDRT1.d 1006 to 1570 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
BP351314   TRIM16andCDRT1.a 4 to 585 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BP353572   TRIM16andCDRT1.d 787 to 1370 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DN997877 breast cancer, Mammary gland (cancer tissue) TRIM16andCDRT1.a 12 to 314 12 to 314       303/314
(96 %)
6 diff
(98.1 %id)
DN997877 breast cancer, Mammary gland (cancer tissue) TRIM16andCDRT1.a 12 to 314 12 to 314       303/314
(96 %)
6 diff
(98.1 %id)
DB007916 cervix, tumor tissue TRIM16andCDRT1.d 937 to 1505 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DB011739 esophageal, tumor tissue TRIM16andCDRT1.g 536 to 1102 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DB011757 esophageal, tumor tissue TRIM16andCDRT1.g 522 to 1087 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB011904 esophageal, tumor tissue TRIM16andCDRT1.g 559 to 1105 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB012241 esophageal, tumor tissue TRIM16andCDRT1.a 5 to 573 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB012381 esophageal, tumor tissue TRIM16andCDRT1.g 524 to 985 2 to 464   capped   463/463
(100 %)
1 diff
(99.8 %id)
DB012425 esophageal, tumor tissue TRIM16andCDRT1.g 524 to 1022 2 to 501   capped   500/500
(100 %)
2 diff
(99.6 %id)
DC393878.
matches multiple genes
esophageal, tumor tissue TRIM16andCDRT1.g 425 to 910 1 to 487     also hits gene TRIM16L 487/487
(100 %)
2 diff
(99.6 %id)
DB013422 esophageal, tumor tissue TRIM16andCDRT1.d 975 to 1553 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB013859 esophageal, tumor tissue TRIM16andCDRT1.g 522 to 1093 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB015127 esophageal, tumor tissue TRIM16andCDRT1.a 6 to 571 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DC394098.
matches multiple genes
esophageal, tumor tissue TRIM16andCDRT1.g 535 to 1030 1 to 498     also hits gene TRIM16L 498/498
(100 %)
9 diff
(98.2 %id)
DB015617 esophageal, tumor tissue TRIM16andCDRT1.g 524 to 1050 2 to 530   capped   529/529
(100 %)
3 diff
(99.5 %id)
DB017194 esophageal, tumor tissue TRIM16andCDRT1.a 6 to 526 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DB017548 esophageal, tumor tissue TRIM16andCDRT1.g 524 to 1070 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB017912 esophageal, tumor tissue TRIM16andCDRT1.g 522 to 1090 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB018559 esophageal, tumor tissue TRIM16andCDRT1.g 541 to 1101 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB018609 esophageal, tumor tissue TRIM16andCDRT1.m 1 to 579 2 to 580   tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
DB018725 esophageal, tumor tissue TRIM16andCDRT1.g 559 to 1056 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
DB336082 testis TRIM16andCDRT1.c 1552 to 2077 527 to 1   tiling clone,   527/527
(100 %)
2 diff
(99.7 %id)
DB059794.
matches multiple genes
testis TRIM16andCDRT1.b 1 to 519 2 to 520   tiling clone, capped also hits gene FBXW10 519/519
(100 %)
5 diff
(99.1 %id)
DB080156.
matches multiple genes
testis TRIM16andCDRT1.b 1 to 571 9 to 578   tiling clone, capped also hits gene FBXW10 577/577
(100 %)
5 diff
(99.2 %id)
DB088227 testis TRIM16andCDRT1.s 1 to 560 2 to 561 exact tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
DB101116 thymus TRIM16andCDRT1.d 993 to 1518 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DB342308 thymus TRIM16andCDRT1.d 2898 to 3402 505 to 1       505/505
(100 %)
0 diff
(100 %id)
DB118984 thymus TRIM16andCDRT1.a 754 to 1302 2 to 550   capped   549/549
(100 %)
9 diff
(98.4 %id)
DB126250 thymus TRIM16andCDRT1.a 5 to 574 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
TI_154171155   TRIM16andCDRT1.g 600 to 1154 80 to 634       555/556
(99 %)
4 diff
(99.3 %id)
TI_159677628   TRIM16andCDRT1.a 10 to 1018 51 to 1037       989/1060
(93 %)
24 diff
(97.8 %id)
DB190640 lung, tumor tissue TRIM16andCDRT1.a 484 to 1046 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB198245 trachea TRIM16andCDRT1.g 594 to 1177 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB205565 trachea TRIM16andCDRT1.d 966 to 1513 21 to 570   capped   550/569
(96 %)
6 diff
(99.0 %id)
DB209491 trachea TRIM16andCDRT1.a 6 to 492 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
DB209994 trachea TRIM16andCDRT1.d 1006 to 1564 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB212079 trachea TRIM16andCDRT1.d 788 to 1317 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DB242303 stomach, tumor tissue TRIM16andCDRT1.g 559 to 1070 2 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
U65652 heart and skeletal muscle TRIM16andCDRT1.h 1 to 1281 11 to 1293 L119P V128I D134N F143L N144H tiling clone, AAA   1283/1293
(99 %)
21 diff
(98.4 %id)
BM712658 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.b 1851 to 2207 1 to 356   tiling clone, fully sequenced,   356/356
(100 %)
3 diff
(99.2 %id)
BM712658 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.b 1851 to 2207 1 to 356   tiling clone, fully sequenced,   356/356
(100 %)
3 diff
(99.2 %id)
BU738380 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.b 2146 to 2740 613 to 19   tiling clone, fully sequenced, AAA   595/595
(100 %)
2 diff
(99.7 %id)
BU738380 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.b 2146 to 2740 613 to 19   tiling clone, fully sequenced, AAA   595/595
(100 %)
2 diff
(99.7 %id)
BM727448 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.ve 1 to 559 1 to 559 Q34H tiling clone,   559/559
(100 %)
1 diff
(99.9 %id)
BM727448 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.ve 1 to 559 1 to 559 Q34H tiling clone,   559/559
(100 %)
1 diff
(99.9 %id)
BM723278 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.d 918 to 1563 1 to 646       646/648
(99 %)
2 diff
(99.7 %id)
BM723278 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid TRIM16andCDRT1.d 918 to 1563 1 to 646       646/648
(99 %)
2 diff
(99.7 %id)
BQ774415.
matches multiple genes
Chondrosarcoma Grade II, Left Pelvis TRIM16andCDRT1.i-u 134 to 794 678 to 19   tiling clone, AAA also hits gene FBXW10 660/660
(100 %)
5 diff
(99.3 %id)
BQ774415.
matches multiple genes
Chondrosarcoma Grade II, Left Pelvis TRIM16andCDRT1.i-u 134 to 794 678 to 19   tiling clone, AAA also hits gene FBXW10 660/660
(100 %)
5 diff
(99.3 %id)
TI_151728711   TRIM16andCDRT1.a 140 to 868 758 to 33       726/762
(95 %)
4 diff
(99.5 %id)
DC420007.
matches multiple genes
uterus TRIM16andCDRT1.g 503 to 1065 1 to 563     also hits gene TRIM16L 563/563
(100 %)
3 diff
(99.5 %id)
DB255819 uterus TRIM16andCDRT1.f 12 to 573 2 to 563   capped   562/562
(100 %)
6 diff
(99.0 %id)
DC420898.
matches multiple genes
uterus TRIM16andCDRT1.g 524 to 1070 1 to 548     also hits gene TRIM16L 548/548
(100 %)
4 diff
(99.3 %id)
BP380980   TRIM16andCDRT1.a 5 to 657 1 to 653       653/653
(100 %)
9 diff
(98.7 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j, .k, .l-u, .m, .n, .o, .p, .q, .r, .s, .t-u, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg, .vh-u, .vi-u, .vj, .vk, .vl-u, .vm-u, .vn Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI