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Gene SLC16A10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
71 supporting clones for gene SLC16A10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF116652 Liver .d 1 to 2372 2410 to 32 exact tiling clone, AAA Submitted on the opposite strand 2379/2379
(100 %)
5 diff
(99.8 %id)
AI111187 Liver .d 1 to 781 1 to 776 E217N S218L D219X S220L I221L ...     776/782
(99 %)
12 diff
(98.5 %id)
AK126183 thymus .a 40 to 2615 1 to 2578 exact tiling clone, available from FLJ,   2578/2578
(100 %)
2 diff
(100.0 %id)
AK172789   .a 894 to 3541 1 to 2647   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 2647/2648
(99 %)
13 diff
(99.6 %id)
BC034031 placenta .b 1 to 1234 1 to 1235 I282N N284Q A286C I287H F288L ... tiling clone, available from MGC, AAA   1235/1235
(100 %)
1 diff
(100.0 %id)
BC066985 testis .a 143 to 2612 1 to 2472 exact available from MGC, AAA   2472/2472
(100 %)
3 diff
(99.9 %id)
BF083534 colon .a 1714 to 1982 271 to 7       265/271
(97 %)
0 diff
(100 %id)
BG187547   .b 645 to 1239 1 to 595       595/599
(99 %)
4 diff
(99.4 %id)
BG199010   .f 1 to 734 747 to 12 exact tiling clone, Submitted on the opposite strand 734/750
(97 %)
8 diff
(99.0 %id)
BG201576   .b 970 to 1239 283 to 14     Submitted on the opposite strand 270/283
(95 %)
0 diff
(100 %id)
BG208277   .a 1619 to 1906 1 to 289       289/289
(100 %)
9 diff
(96.9 %id)
BX102123 liver and spleen .a 2722 to 3488 1 to 771   tiling clone,   771/771
(100 %)
4 diff
(99.5 %id)
CN271699 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 476 to 820 1 to 345   tiling clone, AAA   345/345
(100 %)
3 diff
(99.2 %id)
CN427996 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1832 to 2551 8 to 729       722/729
(99 %)
6 diff
(99.2 %id)
CR742172   .a 1707 to 2217 1 to 513       513/513
(100 %)
1 diff
(99.9 %id)
AL524601 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1228 to 2107 880 to 1   tiling clone,   880/880
(100 %)
13 diff
(98.6 %id)
AL524602 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 46 to 1080 1 to 1027   AAA   1027/1062
(96 %)
18 diff
(98.4 %id)
BX345185 Placenta Cot 25-normalized .a 629 to 1376 1 to 742       742/745
(99 %)
11 diff
(98.6 %id)
BX348982 Placenta Cot 25-normalized .a 970 to 1779 1 to 798       798/959
(83 %)
35 diff
(96.4 %id)
BX360503 Placenta Cot 25-normalized .a 629 to 1136 1 to 508       508/533
(95 %)
3 diff
(99.5 %id)
EL735456 mixed .a 1232 to 1808 1 to 576       576/589
(97 %)
3 diff
(99.5 %id)
D81852 brain .a 2401 to 2615 1 to 215       215/215
(100 %)
1 diff
(99.6 %id)
D81929 brain .a 2401 to 2953 1 to 550       550/550
(100 %)
12 diff
(97.9 %id)
D81992 brain .a 2401 to 2840 1 to 440       440/440
(100 %)
9 diff
(98.0 %id)
DB453967.
matches multiple genes
testis .a 1 to 466 1 to 466   tiling clone, also hits gene choplobu 466/466
(100 %)
0 diff
(100 %id)
BP239721 Liver .a 868 to 1478 1 to 612       612/612
(100 %)
9 diff
(98.6 %id)
H95452 placenta .a 2216 to 2588 376 to 1       376/376
(100 %)
2 diff
(99.5 %id)
N30257 placenta .a 2090 to 2621 534 to 1   fully sequenced,   534/534
(100 %)
17 diff
(96.9 %id)
N41980 placenta .a 1560 to 2120 1 to 562   fully sequenced,   562/562
(100 %)
5 diff
(99.2 %id)
N40659.
matches multiple genes
placenta .a 1589 to 2029 1 to 444     also hits gene PSMD7 444/457
(97 %)
5 diff
(99.0 %id)
W32409 parathyroid gland, parathyroid tumor .a 2216 to 2612 397 to 1   fully sequenced,   397/397
(100 %)
1 diff
(99.8 %id)
W32855 parathyroid gland, parathyroid tumor .a 1829 to 2246 1 to 423   fully sequenced,   423/423
(100 %)
4 diff
(99.1 %id)
AA001776 liver and spleen .a 2723 to 2980 1 to 258       258/258
(100 %)
0 diff
(100 %id)
AA001777 liver and spleen .a 3111 to 3539 433 to 1       433/433
(100 %)
9 diff
(98.0 %id)
AA876069 colon, colon tumor RER+ .a 2309 to 2612 304 to 1       304/304
(100 %)
0 diff
(100 %id)
AA747202 alveolar rhabdomyosarcoma .a 2334 to 2619 297 to 11   AAA   287/287
(100 %)
4 diff
(98.7 %id)
AA883143 pooled .e 404 to 823 422 to 3   tiling clone,   420/422
(99 %)
0 diff
(100 %id)
AI221043 placenta .a 2330 to 2622 293 to 1       293/293
(100 %)
0 diff
(100 %id)
AI242847 liver and spleen .a 3214 to 3543 331 to 1   tiling clone,   331/331
(100 %)
2 diff
(99.4 %id)
AI299574 2 pooled tumors (clear cell type), Kidney .a 2258 to 2618 367 to 7       361/367
(98 %)
0 diff
(100 %id)
AI373734 Kidney .a 2270 to 2622 361 to 9       353/361
(97 %)
0 diff
(100 %id)
AI910470 colon, colon tumor, RER+ .a 2275 to 2612 338 to 1       338/338
(100 %)
0 diff
(100 %id)
AB057445 thymus .a 115 to 2250 1 to 2138 exact     2138/2150
(99 %)
3 diff
(99.9 %id)
AW058100 thymus, pooled .a 115 to 534 1 to 420     Submitted on the opposite strand 420/420
(100 %)
0 diff
(100 %id)
AW196676 pooled germ cell tumors .a 2170 to 2622 457 to 5       453/457
(99 %)
0 diff
(100 %id)
AW237016 pooled germ cell tumors .b 948 to 1256 309 to 1       309/309
(100 %)
1 diff
(99.7 %id)
AW448965   .b 907 to 1256 367 to 18   tiling clone, AAA   350/352
(99 %)
5 diff
(98.6 %id)
BF057228 pooled germ cell tumors .a 2179 to 2621 443 to 1       443/443
(100 %)
0 diff
(100 %id)
BF059424 pooled germ cell tumors .e 1 to 669 669 to 1 exact tiling clone,   669/669
(100 %)
0 diff
(100 %id)
BG435362 placenta .a 39 to 638 1 to 604       604/630
(95 %)
20 diff
(96.9 %id)
BC017968 Prostate, adenocarcinoma. .a 1106 to 3003 1 to 1900   tiling clone, available from MGC, AAA   1900/1900
(100 %)
3 diff
(99.9 %id)
BG498565 adenocarcinoma, Prostate .a 1106 to 1600 1 to 495   available from MGC,   495/495
(100 %)
1 diff
(99.8 %id)
BG722805 testis .a 138 to 638 1 to 491       491/774
(63 %)
17 diff
(97.9 %id)
BI118064 lung, small cell carcinoma .a 556 to 1235 12 to 689       678/867
(78 %)
12 diff
(98.7 %id)
BM354092 Islets of Langerhans, Pancreas .a 1731 to 2265 1 to 537       537/537
(100 %)
1 diff
(99.9 %id)
CK820059 Islets of Langerhans, Pancreas .a 1715 to 2315 1 to 604       604/604
(100 %)
2 diff
(99.7 %id)
BM997859 lung, Lung Focal Fibrosis .e 243 to 822 598 to 19   AAA   580/580
(100 %)
2 diff
(99.7 %id)
BQ778390 Pancreas, Purified pancreatic islet .a 156 to 666 1 to 512     Submitted on the opposite strand 512/512
(100 %)
3 diff
(99.5 %id)
BQ778609 Pancreas, Purified pancreatic islet .b 644 to 1256 635 to 23   AAA Submitted on the opposite strand 613/613
(100 %)
2 diff
(99.7 %id)
CD251942 testis .c 1 to 831 1 to 835 T2K S254I I255H V256S R257K ... tiling clone,   835/839
(99 %)
8 diff
(99.1 %id)
NM_018593.4   .a 115 to 3003 1 to 2889 exact RefSeq, AAA   2889/2889
(100 %)
0 diff
(100 %id)
TI_1948219735   .a 1342 to 1836 624 to 130       495/522
(94 %)
1 diff
(99.9 %id)
TI_1948219736   .a 1434 to 1836 538 to 136       403/431
(93 %)
1 diff
(99.8 %id)
TI_1948220019   .a 1232 to 1836 735 to 128       608/1330
(45 %)
8 diff
(99.4 %id)
TI_1948220020   .a 1243 to 1836 731 to 134       598/1394
(42 %)
24 diff
(98.3 %id)
TI_1948220328   .a 1342 to 1836 621 to 127       495/522
(94 %)
1 diff
(99.9 %id)
TI_1948220614   .a 1232 to 1592 138 to 498       361/389
(92 %)
7 diff
(98.3 %id)
DR004892 placenta .a 57 to 700 1 to 643       643/643
(100 %)
7 diff
(99.0 %id)
DB109077 thymus .a 1014 to 1597 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB130391 thymus .a 41 to 518 2 to 479   capped   478/478
(100 %)
0 diff
(100 %id)
DB344535 thymus .a 2080 to 2615 536 to 1       536/536
(100 %)
1 diff
(99.9 %id)
TI_154108447   .a 1677 to 2612 1016 to 82   AAA   935/989
(94 %)
51 diff
(94.9 %id)
CA447635 Chondrosarcoma, Left Pelvis .a 1999 to 2612 634 to 19   AAA   616/616
(100 %)
3 diff
(99.6 %id)
CA431997 cell lines, Chondrosarcoma .a 2003 to 2621 637 to 17   AAA   621/621
(100 %)
2 diff
(99.7 %id)
BE070429 breast .b 644 to 1256 635 to 23     This clone was ignored 613/613
(100 %)
2 diff
(99.7 %id)
DB131473 thymus .c 1 to 831 1 to 835   tiling clone, capped This clone was ignored 835/839
(99 %)
8 diff
(99.1 %id)
DB344635 thymus .a 115 to 3003 1 to 2889   RefSeq, This clone was ignored 2889/2889
(100 %)
0 diff
(100 %id)
TI_1948219735   .a 1342 to 1836 624 to 130       495/522
(94 %)
1 diff
(99.9 %id)
TI_1948219736   .a 1434 to 1836 538 to 136       403/431
(93 %)
1 diff
(99.8 %id)
TI_1948220019   .a 1232 to 1836 735 to 128       608/1330
(45 %)
8 diff
(99.4 %id)
TI_1948220020   .a 1243 to 1836 731 to 134       598/1394
(42 %)
24 diff
(98.3 %id)
TI_1948220328   .a 1342 to 1836 621 to 127       495/522
(94 %)
1 diff
(99.9 %id)
TI_1948220614   .a 1232 to 1592 138 to 498       361/389
(92 %)
7 diff
(98.3 %id)
DR004892 placenta .a 57 to 700 1 to 643       643/643
(100 %)
7 diff
(99.0 %id)
DB109077 thymus .a 1014 to 1597 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB130391 thymus .a 41 to 518 2 to 479   capped   478/478
(100 %)
0 diff
(100 %id)
DB344535 thymus .a 2080 to 2615 536 to 1       536/536
(100 %)
1 diff
(99.9 %id)
TI_154108447   .a 1677 to 2612 1016 to 82   AAA   935/989
(94 %)
51 diff
(94.9 %id)
CA447635 Chondrosarcoma, Left Pelvis .a 1999 to 2612 634 to 19   AAA   616/616
(100 %)
3 diff
(99.6 %id)
CA447635 Chondrosarcoma, Left Pelvis .a 1999 to 2612 634 to 19   AAA   616/616
(100 %)
3 diff
(99.6 %id)
CA431997 cell lines, Chondrosarcoma .a 2003 to 2621 637 to 17   AAA   621/621
(100 %)
2 diff
(99.7 %id)
CA431997 cell lines, Chondrosarcoma .a 2003 to 2621 637 to 17   AAA   621/621
(100 %)
2 diff
(99.7 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI