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Gene DUSP5PandRHOUTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
332 supporting clones for gene DUSP5PandRHOU back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA719149   .k-u 1197 to 1470 274 to 1 exact     274/274
(100 %)
0 diff
(100 %id)
AA758224   .k-u 981 to 1545 566 to 2 exact     565/566
(99 %)
0 diff
(100 %id)
AA094482   .k-u 1052 to 1218 1 to 167       167/170
(98 %)
5 diff
(97.1 %id)
AA313088 Prostate .k-u 1037 to 1328 295 to 1       295/295
(100 %)
6 diff
(98.0 %id)
AA319342 adrenal gland .a 2110 to 2386 1 to 279       279/280
(99 %)
5 diff
(98.3 %id)
AA356614   .k-u 127 to 379 1 to 254       254/254
(100 %)
1 diff
(99.7 %id)
AA363659 Pancreas .a 2545 to 2840 1 to 298       298/299
(99 %)
4 diff
(98.7 %id)
AA371477 Prostate .a 1739 to 2015 1 to 279       279/284
(98 %)
9 diff
(96.9 %id)
AB051826   .a 588 to 1685 1 to 1098 exact     1098/1098
(100 %)
0 diff
(100 %id)
AB074878   .a 528 to 1508 1 to 981 exact     981/981
(100 %)
0 diff
(100 %id)
BP194132 brain .k-u 34 to 613 9 to 586       578/586
(98 %)
6 diff
(99.0 %id)
AF211836   .a 45 to 4368 1 to 4324 exact tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 4324/4324
(100 %)
7 diff
(99.9 %id)
AF251701   .a 810 to 1688 1 to 881       881/885
(99 %)
21 diff
(97.7 %id)
AF282258   .a 428 to 1829 1 to 1401 exact     1401/1402
(99 %)
4 diff
(99.8 %id)
AF378087   .a 667 to 1443 1 to 777 exact     777/777
(100 %)
1 diff
(99.9 %id)
AI989313   .a 1861 to 2430 570 to 1       570/570
(100 %)
4 diff
(99.3 %id)
AK001478   .a 1955 to 4365 11 to 2421   available from FLJ,   2411/2411
(100 %)
2 diff
(100.0 %id)
AK055963   .i 205 to 2596 1 to 2392 W164C tiling clone, available from FLJ,   2392/2392
(100 %)
5 diff
(99.8 %id)
AK092260   .j 1 to 2460 2 to 2461 exact tiling clone, available from FLJ,   2461/2472
(99 %)
3 diff
(99.9 %id)
AK289971 hippocampus .a 415 to 2033 1 to 1619 exact     1619/1619
(100 %)
3 diff
(99.9 %id)
AW386201 pnet .d-u 1855 to 2186 1 to 332   tiling clone,   332/332
(100 %)
1 diff
(99.7 %id)
AW386204 pnet .d-u 1855 to 2186 1 to 332   tiling clone,   332/332
(100 %)
1 diff
(99.7 %id)
AW959490   .a 2552 to 3058 1 to 505       505/507
(99 %)
10 diff
(98.1 %id)
AW965786   .k-u 128 to 782 1 to 646       646/648
(99 %)
19 diff
(97.1 %id)
AW974662   .a 1139 to 1685 666 to 120   AAA Submitted on the opposite strand 547/547
(100 %)
1 diff
(99.9 %id)
AX747436   .j 1 to 2460 2 to 2461 exact     2461/2472
(99 %)
3 diff
(99.9 %id)
BC040076 Brain, fetal, whole pooled .a 420 to 4365 1 to 3946 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 3946/3946
(100 %)
0 diff
(100 %id)
BE179566 head_neck .k-u 1059 to 1363 314 to 10     Submitted on the opposite strand 305/327
(93 %)
0 diff
(100 %id)
BE709754 head_neck .k-u 1059 to 1363 14 to 318       305/327
(93 %)
1 diff
(99.7 %id)
BF756125 colon .a 1488 to 1970 483 to 1     Submitted on the opposite strand 483/483
(100 %)
1 diff
(99.8 %id)
BF803082 colon_ins .a 829 to 1243 429 to 16     Submitted on the opposite strand 414/436
(94 %)
3 diff
(99.4 %id)
BF807056 colon_ins .a 828 to 1243 1 to 420       420/425
(98 %)
18 diff
(95.8 %id)
BF844915 head_neck .g 429 to 560 1 to 135   tiling clone,   135/145
(93 %)
17 diff
(88.3 %id)
BF844930 head_neck .g 472 to 768 11 to 313   tiling clone,   303/323
(93 %)
18 diff
(94.5 %id)
BG899719 cartilage .a 420 to 717 84 to 381       298/314
(94 %)
1 diff
(99.7 %id)
BG899803 cartilage .k-u 500 to 1055 84 to 638       555/568
(97 %)
9 diff
(98.5 %id)
BG926456 cartilage .a 516 to 1065 92 to 641       550/569
(96 %)
7 diff
(98.8 %id)
BG927027 cartilage .a 516 to 821 86 to 391       306/323
(94 %)
6 diff
(98.2 %id)
BG958095 colon .a 2382 to 2759 383 to 3       381/383
(99 %)
0 diff
(100 %id)
DA041558 bladder .a 1822 to 2382 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BQ344949 nervous_tumor .d-u 159 to 471 1 to 314   tiling clone,   314/314
(100 %)
11 diff
(96.5 %id)
DA114273 cerebellum .a 1386 to 1937 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA130468 alzheimer cortex .a 2495 to 3051 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA131261 alzheimer cortex .a 2406 to 2954 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA133213 alzheimer cortex .a 1716 to 2253 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA134223 alzheimer cortex .a 1513 to 2063 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA152224 amygdala .a 1528 to 2029 2 to 503   capped   502/502
(100 %)
2 diff
(99.7 %id)
DA153728 amygdala .a 1652 to 2204 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
DA172673 amygdala .a 1831 to 2407 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA193104 amygdala .a 1067 to 1636 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA193412 amygdala .a 1082 to 1684 2 to 605   capped   604/604
(100 %)
2 diff
(99.7 %id)
DA208616 brain .a 1438 to 2018 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA222862 brain .c-u 1 to 538 2 to 539   tiling clone, capped   538/538
(100 %)
0 diff
(100 %id)
DA264145 caudate nucleus .a 2162 to 2741 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA272432 caudate nucleus .a 2003 to 2571 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA273869 corpus callosum .a 1723 to 2295 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA273940 corpus callosum .a 1580 to 2151 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA285488 corpus callosum .a 1924 to 2486 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA317297 hippocampus .a 416 to 654 2 to 241   capped   240/240
(100 %)
2 diff
(99.2 %id)
DA321957 hippocampus .l 1 to 593 2 to 596 exact tiling clone, capped   595/595
(100 %)
5 diff
(99.2 %id)
DA344364 substantia nigra .a 1438 to 2015 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA346602 substantia nigra .a 1470 to 2029 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA351851 substantia nigra .h 7 to 558 2 to 553   tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
DA353724 substantia nigra .a 2264 to 2807 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA355196 subthalamic nucleus .a 2461 to 3020 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DA363304 subthalamic nucleus .a 2580 to 3127 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA368014 subthalamic nucleus .a 2567 to 3112 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA387522 thalamus .a 1672 to 2264 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA406912 thalamus .a 1081 to 1729 2 to 651   capped   650/650
(100 %)
3 diff
(99.6 %id)
BF725546 eye, Iris .k-u 492 to 1024 1 to 533       533/533
(100 %)
0 diff
(100 %id)
BX100860 liver and spleen .k-u 422 to 1074 1 to 655       655/655
(100 %)
2 diff
(99.7 %id)
BX103278 brain, tumor, 5 pooled (see description) .d-u 2626 to 2856 244 to 15   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 230/241
(95 %)
1 diff
(99.6 %id)
Z39926 brain, total brain .k-u 1222 to 1543 322 to 1 exact     322/322
(100 %)
0 diff
(100 %id)
Z43860 brain, total brain .k-u 208 to 532 1 to 325       325/325
(100 %)
1 diff
(99.7 %id)
F03335 brain, total brain .a 4206 to 4365 160 to 1       160/160
(100 %)
0 diff
(100 %id)
F07057 brain, total brain .a 2674 to 2905 1 to 231       231/231
(100 %)
3 diff
(98.8 %id)
F01671 brain, total brain .a 4129 to 4370 242 to 1       242/242
(100 %)
0 diff
(100 %id)
Z42134 brain, total brain .a 2684 to 2923 1 to 239       239/239
(100 %)
1 diff
(99.6 %id)
CB265476 adipose .a 2275 to 2658 385 to 1     Submitted on the opposite strand 385/385
(100 %)
2 diff
(99.5 %id)
CN393489 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 435 to 555 1 to 121       121/121
(100 %)
1 diff
(99.2 %id)
CN393490 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2333 to 3021 1 to 690       690/690
(100 %)
2 diff
(99.8 %id)
CN393491 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 489 to 651 1 to 163       163/163
(100 %)
0 diff
(100 %id)
CN393492 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .k-u 627 to 1290 1 to 664       664/664
(100 %)
10 diff
(98.5 %id)
CN393493 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .k-u 50 to 744 1 to 695       695/695
(100 %)
1 diff
(99.9 %id)
CN393494 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 420 to 746 1 to 327       327/327
(100 %)
0 diff
(100 %id)
CN393495 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1100 to 1686 1 to 593       593/593
(100 %)
7 diff
(98.9 %id)
BP220798 colon .a 1435 to 2006 1 to 571       571/571
(100 %)
4 diff
(99.3 %id)
CR616242 T cells (Jurkat cell line) Cot10-normalized .a 2743 to 4336 1 to 1594       1594/1594
(100 %)
0 diff
(100 %id)
CR618637 fetal brain .i 233 to 2557 1 to 2325 exact tiling clone,   2325/2325
(100 %)
0 diff
(100 %id)
BX333415 Neuroblastoma Cot 25-normalized .k-u 664 to 1513 849 to 1 L13F T19X T20X L33X     849/849
(100 %)
10 diff
(98.9 %id)
BX385727 Neuroblastoma Cot 25-normalized .k-u 440 to 1514 1077 to 1 L32X S34X     1077/1077
(100 %)
9 diff
(99.2 %id)
BX385728 Neuroblastoma Cot 25-normalized .a 1 to 985 1 to 984   tiling clone,   984/984
(100 %)
6 diff
(99.4 %id)
AL533998 brain, fetal brain .i 233 to 1060 1 to 828       828/828
(100 %)
3 diff
(99.7 %id)
BX409709 brain, fetal brain .i 940 to 1805 1 to 863       863/863
(100 %)
32 diff
(96.3 %id)
BX433005 brain, fetal brain .i 1889 to 2302 412 to 1       412/416
(99 %)
5 diff
(98.8 %id)
BX433006 brain, fetal brain .i 1398 to 2283 902 to 16       887/945
(93 %)
0 diff
(100 %id)
BX441159 brain, fetal brain .a 1629 to 2551 1 to 922       922/922
(100 %)
1 diff
(99.9 %id)
BX455110 brain, fetal brain .a 3474 to 4363 888 to 1       888/888
(100 %)
13 diff
(98.6 %id)
BX324630 Placenta Cot 25-normalized .a 3410 to 4331 922 to 1       922/1036
(88 %)
9 diff
(99.2 %id)
BX324631 Placenta Cot 25-normalized .a 412 to 1455 1 to 1025 P20X A45C E46R R48A G49R ...     1025/1044
(98 %)
34 diff
(96.8 %id)
AL559624 T cells from T cell leukemia .a 2743 to 3281 1 to 554       554/554
(100 %)
33 diff
(94.1 %id)
AL581201 T cells from T cell leukemia .k-u 1020 to 1514 508 to 1 P26A W28M E29G Q30A G31R ...     508/508
(100 %)
13 diff
(97.5 %id)
BX370313   .k-u 188 to 1038 1 to 853       853/903
(94 %)
32 diff
(96.5 %id)
BX372033   .k-u 345 to 1210 884 to 1       884/911
(97 %)
40 diff
(95.7 %id)
CA392555 eye, RPE/choroid .a 468 to 1114 1 to 659       659/659
(100 %)
11 diff
(98.4 %id)
CA390955 eye, RPE/choroid .a 1504 to 2064 1 to 561       561/561
(100 %)
0 diff
(100 %id)
CV359056 colon_normal .a 828 to 1127 24 to 324       301/327
(92 %)
16 diff
(95.2 %id)
BX478368   .a 2536 to 3165 1 to 636       636/636
(100 %)
7 diff
(98.9 %id)
BX479470   .d-u 88 to 606 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
AL705742 human skeletal muscle .a 1094 to 1524 8 to 436       429/436
(98 %)
6 diff
(98.7 %id)
AL119130 amygdala .a 2363 to 2685 1 to 325       325/325
(100 %)
5 diff
(98.5 %id)
BX952651   .d-u 1245 to 1882 1 to 638       638/638
(100 %)
1 diff
(99.9 %id)
DT216684 brain .k-u 111 to 684 1 to 575       575/575
(100 %)
3 diff
(99.5 %id)
DT216860 brain .a 2659 to 3336 1 to 678       678/678
(100 %)
0 diff
(100 %id)
DT217606 brain .k-u 525 to 1138 1 to 614       614/624
(98 %)
3 diff
(99.6 %id)
EC447579 Prostate .k-u 1446 to 1545 101 to 4       98/101
(97 %)
0 diff
(100 %id)
EC469148 Prostate .k-u 1446 to 1542 99 to 3       97/99
(97 %)
0 diff
(100 %id)
EC484561 Prostate .k-u 1198 to 1311 5 to 121       117/121
(96 %)
6 diff
(95.1 %id)
EC501999 Prostate .k-u 1188 to 1287 1 to 99       99/99
(100 %)
2 diff
(98.0 %id)
EC514502 Prostate .k-u 1189 to 1288 1 to 99       99/100
(99 %)
6 diff
(94.0 %id)
EC558514 Prostate .k-u 1132 to 1246 1 to 119       119/119
(100 %)
6 diff
(95.0 %id)
EC572668 Prostate .k-u 1446 to 1541 96 to 1       96/96
(100 %)
2 diff
(98.0 %id)
DA516163 brain .i 402 to 966 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA519840 brain .h 1 to 542 2 to 543   tiling clone, capped   542/542
(100 %)
0 diff
(100 %id)
DB317150 brain .h 3023 to 3557 535 to 1   tiling clone,   535/543
(98 %)
0 diff
(100 %id)
DA524416.
matches multiple genes
brain .f-u 55 to 598 2 to 545   tiling clone, capped also hits gene nekoyo, nikoyo, nokoyo, nukoyo, rare, sakoyo, sekoyo, sikoyo, sukoyo, takoyo, tekoyo, tikoyo, tokoyo, tukoyo 544/544
(100 %)
2 diff
(99.7 %id)
DA525743.
matches multiple genes
brain .f-u 29 to 588 2 to 561   tiling clone, capped also hits gene nekoyo, nikoyo, nokoyo, nukoyo, rare, sakoyo, sekoyo, sikoyo, sukoyo, tikoyo, tokoyo, tukoyo 560/560
(100 %)
1 diff
(99.9 %id)
DA534169 brain .a 1829 to 2417 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
FN128915 breast carcinoma .k-u 1316 to 1416 108 to 1     Submitted on the opposite strand 108/108
(100 %)
6 diff
(94.5 %id)
D81441 brain .d-u 871 to 1140 1 to 269   tiling clone,   269/269
(100 %)
1 diff
(99.7 %id)
AV655272 corresponding non cancerous liver tissue .a 814 to 1204 1 to 391     Submitted on the opposite strand 391/391
(100 %)
1 diff
(99.8 %id)
DB539137 hippocampus .k-u 1101 to 1543 1 to 444 Y2I V10F G31A   Submitted on the opposite strand 444/444
(100 %)
10 diff
(97.8 %id)
AU120225 whole embryo, mainly body .a 2718 to 3588 2 to 866   capped Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 865/867
(99 %)
12 diff
(98.7 %id)
DB358880 whole embryo, mainly body .a 3839 to 4365 552 to 28   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 525/527
(99 %)
8 diff
(98.5 %id)
BJ993011 hepatoblastoma .a 2639 to 3238 1 to 600       600/600
(100 %)
4 diff
(99.4 %id)
BJ993012 hepatoblastoma .a 3899 to 4330 432 to 1       432/432
(100 %)
0 diff
(100 %id)
BP250676 hippocampus .a 1509 to 2091 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BP264197 small intestine .a 2688 to 3213 1 to 526       526/550
(95 %)
24 diff
(95.7 %id)
R13701 whole brain .a 2427 to 2778 1 to 355     Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 355/355
(100 %)
6 diff
(98.4 %id)
R37796 whole brain .a 4148 to 4368 236 to 15   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 222/222
(100 %)
1 diff
(99.6 %id)
R19551 whole brain .k-u 65 to 418 1 to 357       357/357
(100 %)
4 diff
(98.9 %id)
H15156 whole brain .k-u 1078 to 1548 488 to 16 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 473/473
(100 %)
8 diff
(98.4 %id)
H15216 whole brain .k-u 65 to 508 1 to 452     Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 452/454
(99 %)
12 diff
(97.4 %id)
T58540 ovary .a 1350 to 1661 340 to 12   fully sequenced,   329/340
(96 %)
6 diff
(98.3 %id)
T58596 ovary .a 1153 to 1380 1 to 228   fully sequenced,   228/228
(100 %)
1 diff
(99.6 %id)
T95465 liver and spleen .a 2634 to 3005 1 to 369       369/380
(97 %)
18 diff
(95.3 %id)
R08917 liver and spleen .k-u 1111 to 1545 453 to 2 W4X Q21X     452/453
(99 %)
0 diff
(100 %id)
R09023 liver and spleen .k-u 423 to 754 1 to 346       346/346
(100 %)
16 diff
(95.4 %id)
R65802 placenta .k-u 1172 to 1531 382 to 16       367/384
(95 %)
0 diff
(100 %id)
R65897 placenta .k-u 686 to 1032 1 to 356       356/361
(98 %)
17 diff
(95.3 %id)
R77267 placenta .k-u 1166 to 1524 359 to 1 F6X Q21X fully sequenced,   359/359
(100 %)
1 diff
(99.8 %id)
R77316 placenta .k-u 694 to 1196 1 to 512   fully sequenced,   512/512
(100 %)
22 diff
(95.8 %id)
R82856 placenta .k-u 694 to 1045 1 to 361       361/392
(92 %)
13 diff
(96.7 %id)
R82857 placenta .k-u 1338 to 1515 178 to 1       178/183
(97 %)
0 diff
(100 %id)
R93133 liver and spleen .k-u 1269 to 1539 274 to 1 T5P K27E     274/274
(100 %)
6 diff
(97.9 %id)
H77582 liver and spleen .k-u 678 to 1137 1 to 460       460/461
(99 %)
5 diff
(99.0 %id)
H77583 liver and spleen .k-u 1189 to 1548 372 to 6       367/377
(97 %)
0 diff
(100 %id)
N76954 liver and spleen .k-u 758 to 964 1 to 208       208/213
(97 %)
5 diff
(97.7 %id)
N55569.
matches multiple genes
liver and spleen .k-u 1088 to 1543 465 to 1     also hits gene fomarbu 465/477
(97 %)
16 diff
(96.7 %id)
N58316 liver and spleen .k-u 1414 to 1545 132 to 1       132/132
(100 %)
0 diff
(100 %id)
N77681 liver and spleen .k-u 300 to 409 1 to 110       110/110
(100 %)
0 diff
(100 %id)
N50021 multiple sclerosis lesions .k-u 1081 to 1546 466 to 1 exact     466/466
(100 %)
1 diff
(99.8 %id)
N45210 multiple sclerosis lesions .k-u 944 to 1548 603 to 1 W28M E29G Q30A G31R L32P ...     603/607
(99 %)
12 diff
(98.1 %id)
N59861 multiple sclerosis lesions .k-u 1100 to 1543 446 to 1 exact     446/446
(100 %)
2 diff
(99.6 %id)
N59869 multiple sclerosis lesions .k-u 1157 to 1543 391 to 1 exact     391/463
(84 %)
4 diff
(99.2 %id)
N93112 parathyroid gland, parathyroid tumor .k-u 1131 to 1543 421 to 15 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 407/408
(99 %)
11 diff
(97.4 %id)
W38788 parathyroid gland, parathyroid tumor .k-u 458 to 853 1 to 404     Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 404/404
(100 %)
10 diff
(97.6 %id)
W52631 Pancreas, pancreatic islet .k-u 483 to 909 1 to 427       427/430
(99 %)
5 diff
(98.9 %id)
AA778115 heart .k-u 1127 to 1550 424 to 1 exact     424/424
(100 %)
0 diff
(100 %id)
AA011659 liver and spleen .k-u 1094 to 1543 450 to 1 exact     450/450
(100 %)
0 diff
(100 %id)
AA011707 liver and spleen .k-u 468 to 960 1 to 495       495/501
(98 %)
7 diff
(98.7 %id)
AA700701 liver and spleen .k-u 1126 to 1545 420 to 1 exact     420/420
(100 %)
0 diff
(100 %id)
AA777775 liver and spleen .k-u 1008 to 1543 536 to 1 exact     536/536
(100 %)
1 diff
(99.9 %id)
AA043405 uterus .k-u 1032 to 1346 11 to 328       318/366
(86 %)
7 diff
(98.1 %id)
AA133248 uterus .k-u 317 to 1019 14 to 712   fully sequenced,   699/712
(98 %)
11 diff
(98.5 %id)
AA133302 uterus .k-u 989 to 1551 571 to 1   tiling clone, fully sequenced,   571/571
(100 %)
17 diff
(97.1 %id)
AA150954 uterus .k-u 1063 to 1543 481 to 1 exact fully sequenced,   481/481
(100 %)
0 diff
(100 %id)
AA151044 uterus .k-u 781 to 1092 1 to 315   fully sequenced,   315/315
(100 %)
9 diff
(97.2 %id)
AA134238 colon, tumor .a 2726 to 3113 1 to 390       390/390
(100 %)
5 diff
(98.8 %id)
AA134239 colon, tumor .a 3948 to 4367 423 to 4       420/423
(99 %)
0 diff
(100 %id)
AA404459   .k-u 563 to 1001 1 to 442       442/442
(100 %)
9 diff
(98.0 %id)
AA448444   .k-u 233 to 552 1 to 320       320/320
(100 %)
2 diff
(99.4 %id)
AA459974   .a 3892 to 4367 481 to 6       476/481
(98 %)
0 diff
(100 %id)
AA460066   .a 2606 to 3100 1 to 493       493/493
(100 %)
2 diff
(99.6 %id)
AA775305 lung .a 2278 to 2681 404 to 1       404/404
(100 %)
1 diff
(99.8 %id)
AA503364 colon .k-u 1054 to 1546 511 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 493/493
(100 %)
0 diff
(100 %id)
AA523791 metastatic prostate bone lesion .k-u 1153 to 1550 8 to 405 exact     398/425
(93 %)
3 diff
(99.3 %id)
AA522740 metastatic prostate bone lesion .k-u 1214 to 1543 1 to 330 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 330/330
(100 %)
3 diff
(99.1 %id)
AA522866 metastatic prostate bone lesion .k-u 1343 to 1550 1 to 208       208/238
(87 %)
6 diff
(97.5 %id)
AA602932   .k-u 947 to 1339 1 to 393       393/393
(100 %)
7 diff
(98.3 %id)
AA602716   .k-u 947 to 1337 1 to 391       391/391
(100 %)
0 diff
(100 %id)
AA652260   .a 1022 to 1685 677 to 14   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 664/666
(99 %)
13 diff
(98.1 %id)
AA879223 metastatic prostate bone lesion .k-u 1339 to 1545 9 to 215       207/216
(95 %)
4 diff
(98.2 %id)
AA935208 metastatic prostate bone lesion .k-u 1355 to 1545 195 to 5       191/195
(97 %)
0 diff
(100 %id)
AA877039 metastatic prostate bone lesion .k-u 1078 to 1464 8 to 394 exact     387/394
(98 %)
6 diff
(98.5 %id)
AA876807 metastatic prostate bone lesion .k-u 1078 to 1453 8 to 384 E29G Q30A G31R L32P L33S ...     377/384
(98 %)
6 diff
(98.5 %id)
AA923007 pooled germ cell tumors .k-u 1210 to 1546 337 to 1 exact     337/337
(100 %)
0 diff
(100 %id)
AI124646 brain, pooled frontal lobe .h 123 to 557 1 to 435     Submitted on the opposite strand 435/435
(100 %)
0 diff
(100 %id)
AI091164 pooled .a 1619 to 2059 1 to 440     Submitted on the opposite strand 440/440
(100 %)
1 diff
(99.8 %id)
AA947682 pooled .a 1735 to 2077 342 to 1       342/342
(100 %)
4 diff
(98.9 %id)
AA994882 pooled .d-u 2417 to 2689 272 to 1       272/272
(100 %)
1 diff
(99.7 %id)
AI014595 pooled .a 1872 to 2075 203 to 1       203/203
(100 %)
3 diff
(98.6 %id)
AI018035   .k-u 1192 to 1545 357 to 4 exact     354/357
(99 %)
0 diff
(100 %id)
AI034208 parathyroid gland, parathyroid tumor .k-u 1041 to 1545 509 to 5 exact     505/509
(99 %)
0 diff
(100 %id)
AI057486 liver and spleen .k-u 1098 to 1545 448 to 1 exact     448/448
(100 %)
0 diff
(100 %id)
AI082642 brain, glioblastoma (pooled) .k-u 1094 to 1544 451 to 1 exact     451/451
(100 %)
0 diff
(100 %id)
AI094830 brain, glioblastoma (pooled) .k-u 1174 to 1548 391 to 17 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 375/375
(100 %)
0 diff
(100 %id)
AI090189 uterus .k-u 1052 to 1543 492 to 1 exact     492/503
(97 %)
0 diff
(100 %id)
AI159893 brain, glioblastoma (pooled) .k-u 1099 to 1550 454 to 3 exact     452/454
(99 %)
0 diff
(100 %id)
AI161400 heart .a 2665 to 3123 459 to 1       459/459
(100 %)
13 diff
(97.2 %id)
AI219918 pooled .d-u 2562 to 2698 138 to 2       137/138
(99 %)
0 diff
(100 %id)
AI219938 pooled .d-u 2296 to 2698 405 to 3       403/405
(99 %)
0 diff
(100 %id)
AI248158 liver and spleen .k-u 1111 to 1548 438 to 1 exact     438/445
(98 %)
2 diff
(99.6 %id)
AI248401 liver and spleen .k-u 1105 to 1548 444 to 1 exact     444/444
(100 %)
2 diff
(99.6 %id)
AI291327 placenta .k-u 1100 to 1550 453 to 3 exact     451/453
(99 %)
0 diff
(100 %id)
AI337943 uterus .a 1201 to 1685 500 to 16   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 485/485
(100 %)
3 diff
(99.4 %id)
AI342277 uterus .k-u 1099 to 1544 446 to 1 exact     446/446
(100 %)
0 diff
(100 %id)
AI354941 lung .a 1246 to 1686 441 to 1       441/441
(100 %)
3 diff
(99.4 %id)
AI359914 brain, glioblastoma (pooled) .k-u 1123 to 1545 425 to 3 H24P     423/425
(99 %)
0 diff
(100 %id)
AI359768 brain, glioblastoma (pooled) .k-u 1088 to 1543 456 to 1 exact     456/456
(100 %)
0 diff
(100 %id)
AI373105 uterus .k-u 1099 to 1545 450 to 4 exact     447/450
(99 %)
0 diff
(100 %id)
AI371627 brain, oligodendroglioma .a 1451 to 1685 15 to 248   AAA Submitted on the opposite strand 234/248
(94 %)
6 diff
(97.6 %id)
AI382139 pooled .a 921 to 1688 767 to 1       767/775
(98 %)
9 diff
(98.9 %id)
AI421080 brain, glioblastoma (pooled) .k-u 1099 to 1543 457 to 13 H24P AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 445/445
(100 %)
2 diff
(99.6 %id)
AI471090 brain, glioblastoma (pooled) .k-u 1261 to 1543 283 to 1 exact     283/283
(100 %)
0 diff
(100 %id)
AI566902 anaplastic oligodendroglioma, brain .d-u 2380 to 2827 467 to 20   tiling clone, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 448/448
(100 %)
0 diff
(100 %id)
AI554805 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .k-u 1190 to 1546 391 to 35 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 357/357
(100 %)
0 diff
(100 %id)
AI687503 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1512 to 1685 174 to 1       174/174
(100 %)
0 diff
(100 %id)
AI624648 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .k-u 1152 to 1550 401 to 3 exact     399/401
(99 %)
0 diff
(100 %id)
AI590561.
matches multiple genes
brain, tumor, 5 pooled (see description) .f-u 1090 to 1476 387 to 1   tiling clone, also hits gene noleybu, plarobo, plarrobo, plawrobo, pleerobo, plerrobo, pleyrobo, plorobo, plorrobo, ployrobo, plurobo, plyrobo, skarobo, skyrobo 387/387
(100 %)
5 diff
(98.8 %id)
AI591395 brain, tumor, 5 pooled (see description) .d-u 2657 to 2859 205 to 4   tiling clone,   202/205
(98 %)
0 diff
(100 %id)
AI627170 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .k-u 1098 to 1544 446 to 1 exact     446/446
(100 %)
1 diff
(99.8 %id)
AI654775 pooled germ cell tumors .k-u 1354 to 1543 190 to 1       397/455
(87 %)
12 diff
(97.4 %id)
AI685130 adenocarcinoma, Pancreas .k-u 1150 to 1543 409 to 16 H24P AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 394/394
(100 %)
6 diff
(98.5 %id)
AI693871 carcinoid, lung .a 1522 to 2042 1 to 521     Submitted on the opposite strand 521/521
(100 %)
3 diff
(99.5 %id)
AI693430 carcinoid, lung .a 1522 to 1990 1 to 469     Submitted on the opposite strand 469/469
(100 %)
1 diff
(99.8 %id)
AI808640 pooled .d-u 2220 to 2540 437 to 117   tiling clone,   321/437
(73 %)
0 diff
(100 %id)
AI934546 2 pooled tumors (clear cell type), Kidney .k-u 1006 to 1547 544 to 3 exact     542/554
(97 %)
0 diff
(100 %id)
AW002934 pooled germ cell tumors .k-u 1232 to 1546 315 to 1 L36Q     315/315
(100 %)
7 diff
(97.8 %id)
AI989973 pooled germ cell tumors .k-u 1354 to 1543 190 to 1       457/515
(88 %)
11 diff
(97.9 %id)
AI967947 pooled germ cell tumors .k-u 1232 to 1546 316 to 1 exact     316/316
(100 %)
4 diff
(98.8 %id)
AW169702 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .k-u 1190 to 1548 359 to 1 exact     359/359
(100 %)
0 diff
(100 %id)
AW197384 pooled germ cell tumors .k-u 1176 to 1544 370 to 2 exact     369/370
(99 %)
0 diff
(100 %id)
AW237218 pooled germ cell tumors .k-u 918 to 1545 630 to 3 exact     628/630
(99 %)
0 diff
(100 %id)
AW242790 Kidney .k-u 1247 to 1543 308 to 12 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 297/297
(100 %)
6 diff
(98.0 %id)
AW243833 serous papillary carcinoma, high grade, 2pooled tumors, uterus .k-u 1115 to 1542 428 to 1 exact     428/428
(100 %)
1 diff
(99.8 %id)
AW243921 serous papillary carcinoma, high grade, 2pooled tumors, uterus .k-u 1049 to 1542 494 to 1 exact     494/494
(100 %)
0 diff
(100 %id)
AW014397   .k-u 1348 to 1543 213 to 18   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 196/196
(100 %)
4 diff
(98.0 %id)
AW297212   .k-u 1341 to 1514 9 to 182     Submitted on the opposite strand 174/185
(94 %)
9 diff
(95.2 %id)
AW298014   .a 2701 to 3131 450 to 20       431/450
(95 %)
0 diff
(100 %id)
AW298134   .c-u 121 to 647 14 to 540   tiling clone, Submitted on the opposite strand 527/540
(97 %)
0 diff
(100 %id)
AW303501 pooled .d-u 2223 to 2698 477 to 2       476/477
(99 %)
0 diff
(100 %id)
AW304855 brain, three pooled meningiomas .k-u 1125 to 1548 424 to 1 N8T     424/424
(100 %)
1 diff
(99.8 %id)
AW302479 brain, three pooled meningiomas .k-u 1115 to 1545 434 to 4 exact     431/434
(99 %)
0 diff
(100 %id)
AW511303 pooled .a 1257 to 1688 436 to 5       432/436
(99 %)
0 diff
(100 %id)
AW589727 pooled germ cell tumors .k-u 1354 to 1543 190 to 1       272/330
(82 %)
13 diff
(96.1 %id)
AW590251 pooled germ cell tumors .k-u 1132 to 1545 417 to 4 exact     414/417
(99 %)
0 diff
(100 %id)
AW594430 pooled germ cell tumors .k-u 1253 to 1543 291 to 1 exact     291/291
(100 %)
0 diff
(100 %id)
BE328612 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .k-u 1147 to 1543 412 to 16 H24P AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 397/397
(100 %)
1 diff
(99.8 %id)
BE348647 carcinoid, lung .a 1522 to 1964 1 to 443     Submitted on the opposite strand 443/443
(100 %)
0 diff
(100 %id)
BE501483 Kidney .a 1314 to 1688 375 to 2       374/375
(99 %)
0 diff
(100 %id)
BE551711 pooled germ cell tumors .k-u 1354 to 1543 190 to 1       456/514
(88 %)
11 diff
(97.9 %id)
BE858142 brain, glioblastoma (pooled) .k-u 966 to 1543 578 to 1 exact     578/578
(100 %)
0 diff
(100 %id)
BE540061 cervix .k-u 619 to 786 1 to 165       165/165
(100 %)
5 diff
(97.0 %id)
BE539194 cervix .k-u 523 to 786 1 to 263       263/263
(100 %)
1 diff
(99.7 %id)
BF574421 muscle (skeletal) .k-u 114 to 841 1 to 727       727/750
(96 %)
32 diff
(95.8 %id)
BF971295 adrenal cortex carcinoma, cell line, adrenal gland .k-u 885 to 1548 1 to 663 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 663/663
(100 %)
3 diff
(99.6 %id)
BG289905 bladder, transitional cell papilloma, cell line .a 2560 to 3112 1 to 557       557/1047
(53 %)
9 diff
(99.2 %id)
BG534718 lung .a 2463 to 2907 1 to 445       445/445
(100 %)
1 diff
(99.8 %id)
BG565410 Liver .k-u 776 to 1548 1 to 786 E29G Q30A G31R L32A L33F ... tiling clone,   786/786
(100 %)
16 diff
(98.0 %id)
BG913248 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2603 to 3508 1 to 908       908/923
(98 %)
27 diff
(97.1 %id)
BI091302 cervix .a 2295 to 3021 1 to 749       749/749
(100 %)
32 diff
(95.8 %id)
BI092147 cervix .k-u 676 to 806 1 to 130       130/130
(100 %)
1 diff
(99.3 %id)
BI092159 cervix .k-u 675 to 806 1 to 133       133/133
(100 %)
1 diff
(99.3 %id)
BM548897.
matches multiple genes
duodenal adenocarcinoma, cell line, small intestine .f-u 1081 to 1598 4 to 532   tiling clone, also hits gene noleybu, plarrobo, pleyrobo, plorrobo, plurobo 529/1156
(45 %)
20 diff
(98.3 %id)
BQ067959 brain .a 421 to 988 1 to 568       568/1259
(45 %)
21 diff
(98.4 %id)
CB216082 normal endometrium, mid-secretory phase,cycle day 23, uterus .a 1997 to 2622 1 to 626       626/626
(100 %)
0 diff
(100 %id)
BQ433855 embryonal carcinoma, cell line, testis .a 2178 to 2736 1 to 559       559/565
(98 %)
1 diff
(99.9 %id)
BQ719029 sympathetic trunk .i 819 to 1635 1 to 814       814/887
(91 %)
8 diff
(99.1 %id)
BQ884165 sciatic nerve .a 392 to 798 1 to 407       407/1011
(40 %)
11 diff
(99.0 %id)
BQ947792 carcinoma, cell line, Prostate .d-u 1380 to 2312 1 to 935   tiling clone,   935/1076
(86 %)
45 diff
(95.9 %id)
BU930497 Prostate .a 1198 to 1977 1 to 787       787/811
(97 %)
13 diff
(98.4 %id)
BU932886 mixed (pool of 40 RNAs) .k-u 467 to 1247 1 to 800       800/805
(99 %)
27 diff
(96.7 %id)
CB996009 placenta, pre-eclamptic placenta .a 1083 to 1849 25 to 798       774/814
(95 %)
13 diff
(98.5 %id)
CB995905 placenta, pre-eclamptic placenta .a 1083 to 1861 25 to 811       787/820
(95 %)
12 diff
(98.6 %id)
CB991888 placenta, pre-eclamptic placenta .a 1083 to 1731 25 to 679       655/838
(78 %)
11 diff
(98.7 %id)
CB959563 Human Placenta, placenta .a 411 to 1096 30 to 717       688/778
(88 %)
21 diff
(97.4 %id)
CB959239 Pooled-Glandular .k-u 256 to 589 3 to 336       334/371
(90 %)
4 diff
(99.0 %id)
CD557229 testis .d-u 1016 to 1876 1 to 865   tiling clone,   865/868
(99 %)
7 diff
(99.2 %id)
CD357541 Blood vessels - aorta, basilar and artery .k-u 387 to 950 1 to 575       575/777
(74 %)
35 diff
(95.5 %id)
CD511349 Blood vessels - aorta, basilar and artery .k-u 415 to 1172 1 to 773       773/787
(98 %)
29 diff
(96.4 %id)
EB387698 eye, optic nerve .a 2395 to 3155 1 to 762       762/762
(100 %)
2 diff
(99.8 %id)
NM_021205.4   .a 46 to 4365 1 to 4320 exact RefSeq, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 4320/4320
(100 %)
0 diff
(100 %id)
AV751358 Pituitary .a 835 to 1520 1 to 684       684/956
(71 %)
24 diff
(97.5 %id)
BP311107 brain .b 1 to 582 1 to 583 Q157R W177X K178E K179E Y180V ... tiling clone,   583/583
(100 %)
2 diff
(99.7 %id)
NR_002834.1   .j 1 to 2471 2 to 2472 exact RefSeq, tiling clone,   2472/2472
(100 %)
3 diff
(99.9 %id)
DA682950   .i 206 to 671 2 to 469   capped   468/471
(99 %)
6 diff
(98.8 %id)
DB322731   .i 2072 to 2596 527 to 1       527/527
(100 %)
2 diff
(99.7 %id)
DA710080   .a 2417 to 2956 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA710594   .d-u 1 to 565 2 to 567   tiling clone, capped   566/566
(100 %)
2 diff
(99.7 %id)
AU129392   .a 1946 to 2636 2 to 691   capped   690/692
(99 %)
7 diff
(99.0 %id)
AU151521   .a 3780 to 4365 586 to 1       586/589
(99 %)
15 diff
(97.5 %id)
DA743083   .e 1 to 510 2 to 511 exact tiling clone, capped   510/510
(100 %)
0 diff
(100 %id)
DA743469   .j 1 to 566 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA745683   .i 346 to 907 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA750610   .j 51 to 616 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DA779453.
matches multiple genes
brain .f-u 1 to 569 2 to 567   tiling clone, capped also hits gene nekoyo, nikoyo, nokoyo, rare, sekoyo, sikoyo, sukoyo, tikoyo, tokoyo, tukoyo 566/566
(100 %)
4 diff
(99.3 %id)
DA805386 brain .a 1155 to 1705 17 to 567   capped   551/566
(97 %)
6 diff
(99.0 %id)
CV569875 cornea, eye .a 2360 to 2975 1 to 616       616/616
(100 %)
1 diff
(99.9 %id)
CV571879 cornea, eye .k-u 964 to 1538 575 to 1 exact   Submitted on the opposite strand 575/575
(100 %)
0 diff
(100 %id)
CV573614 cornea, eye .a 1812 to 2413 1 to 602       602/602
(100 %)
0 diff
(100 %id)
CV571541 cornea, eye .a 2201 to 2758 1 to 558       558/558
(100 %)
0 diff
(100 %id)
CV575429 cornea, eye .g 1 to 521 1 to 521 exact tiling clone,   521/521
(100 %)
0 diff
(100 %id)
AU157502 placenta .a 3798 to 4365 569 to 2       568/573
(99 %)
0 diff
(100 %id)
DA831894 placenta .a 1439 to 2237 2 to 810   capped   809/873
(92 %)
15 diff
(98.3 %id)
BP327872 prostata .a 1194 to 1756 1 to 562       562/562
(100 %)
18 diff
(96.8 %id)
DA992747 synovial membrane tissue from rheumatioidarthritis .h 14 to 548 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
BP351645   .a 1999 to 2536 1 to 538       538/545
(98 %)
2 diff
(99.7 %id)
DN993511 brain, whole brain .d-u 314 to 892 9 to 584   tiling clone,   576/584
(98 %)
3 diff
(99.5 %id)
DR001669 fetal brain .a 416 to 1088 1 to 677       675/677
(99 %)
7 diff
(99.0 %id)
DB020726 testis .a 2580 to 3141 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB062210 testis .m 1 to 529 2 to 530 T28I tiling clone, capped   529/529
(100 %)
3 diff
(99.5 %id)
DB081641 testis .f-u 401 to 959 2 to 560   tiling clone, fully sequenced, capped   559/559
(100 %)
3 diff
(99.5 %id)
DB340864 testis .f-u 929 to 1484 556 to 1   tiling clone, fully sequenced,   556/556
(100 %)
3 diff
(99.5 %id)
DB096576 testis .a 1292 to 1858 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB103916 thymus .i 1 to 559 2 to 560   tiling clone, capped   559/559
(100 %)
2 diff
(99.7 %id)
TI_149274951   .k-u 1206 to 1546 447 to 106 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 342/960
(35 %)
3 diff
(99.7 %id)
TI_159714595   .k-u 740 to 1543 885 to 90 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 796/992
(80 %)
17 diff
(98.3 %id)
TI_227713438   .k-u 754 to 1543 861 to 79 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 783/958
(81 %)
11 diff
(98.9 %id)
TI_227713627   .k-u 699 to 1543 952 to 112 H24P AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 841/994
(84 %)
18 diff
(98.2 %id)
DB170373 kidney, tumor tissue .a 1316 to 1884 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB174173 kidney, tumor tissue .a 2223 to 2788 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB178941 kidney, tumor tissue .a 1963 to 2534 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DB237657 trachea .a 818 to 1383 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BU676430 lung, Primary Lung Epithelial Cells .k-u 1206 to 1546 357 to 16 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 342/346
(98 %)
3 diff
(99.2 %id)
CN478603 Human Lung Epithelial cells, lung .k-u 845 to 1543 717 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 699/699
(100 %)
2 diff
(99.8 %id)
BU607370 Human Lung Epithelial cells, lung .a 1917 to 2607 36 to 726     Submitted on the opposite strand 691/728
(94 %)
13 diff
(98.3 %id)
CA313834 Human Lung Epithelial cells, lung .k-u 837 to 1546 724 to 16 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 709/709
(100 %)
4 diff
(99.5 %id)
CB240912 Human Lung Epithelial cells, lung .k-u 832 to 1546 729 to 16 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 714/714
(100 %)
3 diff
(99.6 %id)
BU732648 eye, optic nerve .k-u 975 to 1543 587 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 569/569
(100 %)
0 diff
(100 %id)
BM682389 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1023 to 1684 679 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 661/661
(100 %)
1 diff
(99.9 %id)
BM717858 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 444 to 718 1 to 275       275/275
(100 %)
0 diff
(100 %id)
BM728547 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2681 to 3366 1 to 686       686/686
(100 %)
1 diff
(99.9 %id)
BM929530 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .k-u 978 to 1543 1 to 565 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 565/565
(100 %)
1 diff
(99.9 %id)
BU742567 eye, fetal eye .k-u 844 to 1548 722 to 17 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 706/706
(100 %)
4 diff
(99.5 %id)
BQ446653 Knee, Osteoarthritic Cartilage .a 1049 to 1685 655 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 637/637
(100 %)
2 diff
(99.7 %id)
CD369645 Alveolar Macrophage, lung .k-u 1070 to 1543 493 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 475/481
(98 %)
1 diff
(99.8 %id)
CB528727 Aveolar Macrophage, lung .k-u 906 to 1543 655 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 637/637
(100 %)
7 diff
(99.0 %id)
CD742643 Alveolar Macrophage, lung .k-u 918 to 1543 644 to 19 H24P AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 626/626
(100 %)
6 diff
(99.1 %id)
CD364428 Alveolar Macrophage, lung .k-u 869 to 1543 693 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 675/675
(100 %)
1 diff
(99.9 %id)
TI_151770478   .k-u 260 to 1234 109 to 1093   tiling clone,   985/1092
(90 %)
60 diff
(94.6 %id)
DB258457 uterus .k-u 1 to 559 2 to 561   tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DB266401 uterus .a 1165 to 1644 2 to 482   capped   481/481
(100 %)
1 diff
(99.8 %id)
DB289633 uterus .a 818 to 1405 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
BP380012 uterus .k-u 689 to 1239 1 to 551       551/551
(100 %)
0 diff
(100 %id)
AB209511 brain .a 835 to 1520 1 to 684     Suspected internal deletion, this clone was ignored 684/956
(71 %)
24 diff
(97.5 %id)
AV707203 adrenal gland .b 1 to 582 1 to 583   tiling clone, Suspected internal deletion, this clone was ignored 583/583
(100 %)
2 diff
(99.7 %id)
AV649450 corresponding non cancerous liver tissue .j 1 to 2471 2 to 2472   RefSeq, tiling clone, AAA Suspected internal deletion, this clone was ignored 2472/2472
(100 %)
3 diff
(99.9 %id)
DA854532 placenta .i 206 to 671 2 to 469   capped Suspected internal deletion, this clone was ignored 468/471
(99 %)
6 diff
(98.8 %id)
DB322731   .i 2072 to 2596 527 to 1       527/527
(100 %)
2 diff
(99.7 %id)
DA710080   .a 2417 to 2956 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA710594   .d-u 1 to 565 2 to 567   tiling clone, capped   566/566
(100 %)
2 diff
(99.7 %id)
AU129392   .a 1946 to 2636 2 to 691   capped   690/692
(99 %)
7 diff
(99.0 %id)
AU151521   .a 3780 to 4365 586 to 1       586/589
(99 %)
15 diff
(97.5 %id)
DA743083   .e 1 to 510 2 to 511 exact tiling clone, capped   510/510
(100 %)
0 diff
(100 %id)
DA743469   .j 1 to 566 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA745683   .i 346 to 907 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA750610   .j 51 to 616 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DA779453.
matches multiple genes
brain .f-u 1 to 569 2 to 567   tiling clone, capped also hits gene nekoyo, nikoyo, nokoyo, rare, sekoyo, sikoyo, sukoyo, tikoyo, tokoyo, tukoyo 566/566
(100 %)
4 diff
(99.3 %id)
DA805386 brain .a 1155 to 1705 17 to 567   capped   551/566
(97 %)
6 diff
(99.0 %id)
CV569875 cornea, eye .a 2360 to 2975 1 to 616       616/616
(100 %)
1 diff
(99.9 %id)
CV569875 cornea, eye .a 2360 to 2975 1 to 616       616/616
(100 %)
1 diff
(99.9 %id)
CV571879 cornea, eye .k-u 964 to 1538 575 to 1 exact   Submitted on the opposite strand 575/575
(100 %)
0 diff
(100 %id)
CV571879 cornea, eye .k-u 964 to 1538 575 to 1 exact   Submitted on the opposite strand 575/575
(100 %)
0 diff
(100 %id)
CV573614 cornea, eye .a 1812 to 2413 1 to 602       602/602
(100 %)
0 diff
(100 %id)
CV573614 cornea, eye .a 1812 to 2413 1 to 602       602/602
(100 %)
0 diff
(100 %id)
CV571541 cornea, eye .a 2201 to 2758 1 to 558       558/558
(100 %)
0 diff
(100 %id)
CV571541 cornea, eye .a 2201 to 2758 1 to 558       558/558
(100 %)
0 diff
(100 %id)
CV575429 cornea, eye .g 1 to 521 1 to 521 exact tiling clone,   521/521
(100 %)
0 diff
(100 %id)
CV575429 cornea, eye .g 1 to 521 1 to 521 exact tiling clone,   521/521
(100 %)
0 diff
(100 %id)
AU157502 placenta .a 3798 to 4365 569 to 2       568/573
(99 %)
0 diff
(100 %id)
DA831894 placenta .a 1439 to 2237 2 to 810   capped   809/873
(92 %)
15 diff
(98.3 %id)
BP327872 prostata .a 1194 to 1756 1 to 562       562/562
(100 %)
18 diff
(96.8 %id)
DA992747 synovial membrane tissue from rheumatioidarthritis .h 14 to 548 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
BP351645   .a 1999 to 2536 1 to 538       538/545
(98 %)
2 diff
(99.7 %id)
DN993511 brain, whole brain .d-u 314 to 892 9 to 584   tiling clone,   576/584
(98 %)
3 diff
(99.5 %id)
DN993511 brain, whole brain .d-u 314 to 892 9 to 584   tiling clone,   576/584
(98 %)
3 diff
(99.5 %id)
DR001669 fetal brain .a 416 to 1088 1 to 677       675/677
(99 %)
7 diff
(99.0 %id)
DB020726 testis .a 2580 to 3141 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB062210 testis .m 1 to 529 2 to 530 T28I tiling clone, capped   529/529
(100 %)
3 diff
(99.5 %id)
DB081641 testis .f-u 401 to 959 2 to 560   tiling clone, fully sequenced, capped   559/559
(100 %)
3 diff
(99.5 %id)
DB340864 testis .f-u 929 to 1484 556 to 1   tiling clone, fully sequenced,   556/556
(100 %)
3 diff
(99.5 %id)
DB096576 testis .a 1292 to 1858 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB103916 thymus .i 1 to 559 2 to 560   tiling clone, capped   559/559
(100 %)
2 diff
(99.7 %id)
TI_149274951   .k-u 1206 to 1546 447 to 106 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 342/960
(35 %)
3 diff
(99.7 %id)
TI_159714595   .k-u 740 to 1543 885 to 90 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 796/992
(80 %)
17 diff
(98.3 %id)
TI_227713438   .k-u 754 to 1543 861 to 79 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 783/958
(81 %)
11 diff
(98.9 %id)
TI_227713627   .k-u 699 to 1543 952 to 112 H24P AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 841/994
(84 %)
18 diff
(98.2 %id)
DB170373 kidney, tumor tissue .a 1316 to 1884 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB174173 kidney, tumor tissue .a 2223 to 2788 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB178941 kidney, tumor tissue .a 1963 to 2534 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DB237657 trachea .a 818 to 1383 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BU676430 lung, Primary Lung Epithelial Cells .k-u 1206 to 1546 357 to 16 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 342/346
(98 %)
3 diff
(99.2 %id)
BU676430 lung, Primary Lung Epithelial Cells .k-u 1206 to 1546 357 to 16 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 342/346
(98 %)
3 diff
(99.2 %id)
CN478603 Human Lung Epithelial cells, lung .k-u 845 to 1543 717 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 699/699
(100 %)
2 diff
(99.8 %id)
CN478603 Human Lung Epithelial cells, lung .k-u 845 to 1543 717 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 699/699
(100 %)
2 diff
(99.8 %id)
BU607370 Human Lung Epithelial cells, lung .a 1917 to 2607 36 to 726     Submitted on the opposite strand 691/728
(94 %)
13 diff
(98.3 %id)
BU607370 Human Lung Epithelial cells, lung .a 1917 to 2607 36 to 726     Submitted on the opposite strand 691/728
(94 %)
13 diff
(98.3 %id)
CA313834 Human Lung Epithelial cells, lung .k-u 837 to 1546 724 to 16 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 709/709
(100 %)
4 diff
(99.5 %id)
CA313834 Human Lung Epithelial cells, lung .k-u 837 to 1546 724 to 16 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 709/709
(100 %)
4 diff
(99.5 %id)
CB240912 Human Lung Epithelial cells, lung .k-u 832 to 1546 729 to 16 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 714/714
(100 %)
3 diff
(99.6 %id)
CB240912 Human Lung Epithelial cells, lung .k-u 832 to 1546 729 to 16 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 714/714
(100 %)
3 diff
(99.6 %id)
BU732648 eye, optic nerve .k-u 975 to 1543 587 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 569/569
(100 %)
0 diff
(100 %id)
BU732648 eye, optic nerve .k-u 975 to 1543 587 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 569/569
(100 %)
0 diff
(100 %id)
BM682389 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1023 to 1684 679 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 661/661
(100 %)
1 diff
(99.9 %id)
BM682389 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1023 to 1684 679 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 661/661
(100 %)
1 diff
(99.9 %id)
BM717858 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 444 to 718 1 to 275       275/275
(100 %)
0 diff
(100 %id)
BM717858 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 444 to 718 1 to 275       275/275
(100 %)
0 diff
(100 %id)
BM728547 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2681 to 3366 1 to 686       686/686
(100 %)
1 diff
(99.9 %id)
BM728547 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2681 to 3366 1 to 686       686/686
(100 %)
1 diff
(99.9 %id)
BM929530 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .k-u 978 to 1543 1 to 565 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 565/565
(100 %)
1 diff
(99.9 %id)
BM929530 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .k-u 978 to 1543 1 to 565 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 565/565
(100 %)
1 diff
(99.9 %id)
BU742567 eye, fetal eye .k-u 844 to 1548 722 to 17 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 706/706
(100 %)
4 diff
(99.5 %id)
BU742567 eye, fetal eye .k-u 844 to 1548 722 to 17 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 706/706
(100 %)
4 diff
(99.5 %id)
BQ446653 Knee, Osteoarthritic Cartilage .a 1049 to 1685 655 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 637/637
(100 %)
2 diff
(99.7 %id)
BQ446653 Knee, Osteoarthritic Cartilage .a 1049 to 1685 655 to 19   AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 637/637
(100 %)
2 diff
(99.7 %id)
CD369645 Alveolar Macrophage, lung .k-u 1070 to 1543 493 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 475/481
(98 %)
1 diff
(99.8 %id)
CD369645 Alveolar Macrophage, lung .k-u 1070 to 1543 493 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 475/481
(98 %)
1 diff
(99.8 %id)
CB528727 Aveolar Macrophage, lung .k-u 906 to 1543 655 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 637/637
(100 %)
7 diff
(99.0 %id)
CB528727 Aveolar Macrophage, lung .k-u 906 to 1543 655 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 637/637
(100 %)
7 diff
(99.0 %id)
CD742643 Alveolar Macrophage, lung .k-u 918 to 1543 644 to 19 H24P AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 626/626
(100 %)
6 diff
(99.1 %id)
CD742643 Alveolar Macrophage, lung .k-u 918 to 1543 644 to 19 H24P AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 626/626
(100 %)
6 diff
(99.1 %id)
CD364428 Alveolar Macrophage, lung .k-u 869 to 1543 693 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 675/675
(100 %)
1 diff
(99.9 %id)
CD364428 Alveolar Macrophage, lung .k-u 869 to 1543 693 to 19 exact AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 675/675
(100 %)
1 diff
(99.9 %id)
TI_151770478   .k-u 260 to 1234 109 to 1093   tiling clone,   985/1092
(90 %)
60 diff
(94.6 %id)
DB258457 uterus .k-u 1 to 559 2 to 561   tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DB266401 uterus .a 1165 to 1644 2 to 482   capped   481/481
(100 %)
1 diff
(99.8 %id)
DB289633 uterus .a 818 to 1405 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
BP380012 uterus .k-u 689 to 1239 1 to 551       551/551
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d-u, .e, .f-u, .g, .h, .i, .j, .k-u, .l, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI