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Gene RHBDL3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
56 supporting clones for gene RHBDL3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA351652 brain RHBDL3.b 1076 to 1419 344 to 1     Submitted on the opposite strand 344/344
(100 %)
1 diff
(99.8 %id)
AA351949 brain RHBDL3.b 1168 to 1419 252 to 1     Submitted on the opposite strand 252/252
(100 %)
2 diff
(99.3 %id)
AJ313480 brain RHBDL3.b 1 to 1419 1 to 1419   tiling clone,   1419/1419
(100 %)
0 diff
(100 %id)
AK124570 cerebellum RHBDL3.e 1 to 4469 2 to 4470 exact tiling clone, available from FLJ,   4470/4470
(100 %)
2 diff
(100.0 %id)
AK127490 thalamus RHBDL3.b 842 to 4654 1 to 3812   tiling clone, available from FLJ,   3812/3812
(100 %)
3 diff
(100.0 %id)
BC100975 PCR rescued clones RHBDL3.b 1 to 1363 1 to 1362       1362/1362
(100 %)
1 diff
(100.0 %id)
BC100977 PCR rescued clones RHBDL3.c 1 to 1339 1 to 1339 exact tiling clone,   1339/1339
(100 %)
1 diff
(100.0 %id)
BC100978 PCR rescued clones RHBDL3.d 1 to 1341 1 to 1341 exact tiling clone,   1341/1341
(100 %)
0 diff
(100 %id)
DA097679 cerebellum RHBDL3.e 1 to 554 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB298845 cerebellum RHBDL3.e 3916 to 4469 554 to 1       554/554
(100 %)
0 diff
(100 %id)
DA120677 cerebellum RHBDL3.b 518 to 1066 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA406649 thalamus RHBDL3.b 843 to 1412 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB312397 thalamus RHBDL3.b 4162 to 4654 493 to 1       493/493
(100 %)
6 diff
(98.8 %id)
BX647302 hippocampus RHBDL3.b 2691 to 4653 1 to 1963   available from DKFZ, AAA   1963/1963
(100 %)
1 diff
(100.0 %id)
CN297391 embryonic stem cells, DMSO-treated H9 cellline RHBDL3.b 1265 to 1981 9 to 727       719/727
(98 %)
9 diff
(98.8 %id)
CN297392 embryonic stem cells, cell lines H1, H7, andH9 RHBDL3.f 490 to 1245 1 to 756 exact tiling clone,   756/756
(100 %)
1 diff
(99.9 %id)
CN297393 embryonic stem cells, cell lines H1, H7, andH9 RHBDL3.b 603 to 1243 1 to 641       641/641
(100 %)
2 diff
(99.7 %id)
CR747668 eye, retinoblastoma RHBDL3.b 567 to 1024 11 to 468       458/468
(97 %)
7 diff
(98.6 %id)
BY799729 eye RHBDL3.b 3605 to 4136 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
H08819 whole brain RHBDL3.b 4472 to 4659 191 to 7       185/191
(96 %)
0 diff
(100 %id)
N48473 multiple sclerosis lesions RHBDL3.b 3191 to 3351 1 to 159       159/159
(100 %)
10 diff
(93.8 %id)
AA235710 ovarian tumor, ovary RHBDL3.b 4268 to 4657 390 to 1       390/390
(100 %)
0 diff
(100 %id)
AA292589 ovarian tumor, ovary RHBDL3.b 3471 to 3809 14 to 351       338/351
(96 %)
6 diff
(98.3 %id)
AI197876 anaplastic oligodendroglioma, brain RHBDL3.b 4326 to 4657 332 to 1       332/332
(100 %)
0 diff
(100 %id)
AI369789 anaplastic oligodendroglioma, brain RHBDL3.b 4265 to 4656 392 to 1       392/392
(100 %)
0 diff
(100 %id)
AI459333 carcinoid, lung RHBDL3.b 4205 to 4485 434 to 154       281/434
(64 %)
0 diff
(100 %id)
AI694520 carcinoid, lung RHBDL3.b 4158 to 4648 491 to 1       491/491
(100 %)
3 diff
(99.4 %id)
AI692483 carcinoid, lung RHBDL3.b 3993 to 4648 652 to 1       652/769
(84 %)
17 diff
(97.8 %id)
AI859187 anaplastic oligodendroglioma, brain RHBDL3.b 4326 to 4657 332 to 1       332/332
(100 %)
0 diff
(100 %id)
AW499683 lymph RHBDL3.b 3900 to 4325 1 to 426   fully sequenced,   426/426
(100 %)
4 diff
(99.1 %id)
AW576462 lymph RHBDL3.b 4295 to 4650 368 to 13   fully sequenced, AAA   356/356
(100 %)
4 diff
(98.9 %id)
BE221904 carcinoid, lung RHBDL3.b 4119 to 4645 528 to 2       527/528
(99 %)
0 diff
(100 %id)
BE220111 carcinoid, lung RHBDL3.b 4192 to 4656 465 to 1       465/465
(100 %)
0 diff
(100 %id)
BE504117 carcinoid, lung RHBDL3.b 4325 to 4636 312 to 1       312/312
(100 %)
3 diff
(99.1 %id)
BE502791 carcinoid, lung RHBDL3.b 4126 to 4636 511 to 1       511/511
(100 %)
1 diff
(99.9 %id)
BE252504 eye, retinoblastoma RHBDL3.b 2964 to 3645 1 to 674       674/681
(98 %)
14 diff
(98.0 %id)
BE254842 eye, retinoblastoma RHBDL3.b 2822 to 3268 1 to 446       446/446
(100 %)
3 diff
(99.4 %id)
BF447694 carcinoid, lung RHBDL3.b 4093 to 4648 553 to 1       553/553
(100 %)
6 diff
(99.0 %id)
BE778475 eye, retinoblastoma RHBDL3.b 589 to 1337 1 to 738       736/894
(82 %)
38 diff
(95.8 %id)
BC016953 Pancreas, epithelioid carcinoma RHBDL3.b 2086 to 4661 1 to 2576   tiling clone, available from MGC, AAA   2576/2576
(100 %)
1 diff
(100.0 %id)
BE904095 epithelioid carcinoma, Pancreas RHBDL3.b 2107 to 2850 1 to 749   available from MGC,   749/749
(100 %)
20 diff
(97.4 %id)
BG911192 anaplastic oligodendroglioma with 1p/19qloss, brain RHBDL3.b 3641 to 4304 12 to 674       663/674
(98 %)
6 diff
(99.2 %id)
BM011465 brain, neuroblastoma, cell line RHBDL3.h-u 3 to 657 1 to 657   tiling clone,   657/659
(99 %)
5 diff
(99.3 %id)
BM926153 brain RHBDL3.b 2602 to 3084 12 to 495       484/1415
(34 %)
15 diff
(99.0 %id)
BM988137 mixed RHBDL3.b 4205 to 4654 468 to 19   AAA   450/450
(100 %)
0 diff
(100 %id)
BU193327 eye, retinoblastoma RHBDL3.g 1 to 570 100 to 678 S9F G10* tiling clone,   579/977
(59 %)
67 diff
(93.2 %id)
BC100976 PCR rescued clones RHBDL3.a 1 to 1262 1 to 1262   tiling clone,   1262/1262
(100 %)
0 diff
(100 %id)
TI_59380630   RHBDL3.h-u 1 to 657 110 to 768 exact tiling clone,   659/661
(99 %)
5 diff
(99.3 %id)
DA645984 mammary gland RHBDL3.f 1 to 726 2 to 732   tiling clone, capped   731/734
(99 %)
8 diff
(99.0 %id)
DB360612 mammary gland RHBDL3.i-u 1 to 532 532 to 1 V27E tiling clone,   532/535
(99 %)
10 diff
(98.2 %id)
NM_138328.2   RHBDL3.b 1 to 4661 1 to 4661   RefSeq, AAA   4661/4661
(100 %)
0 diff
(100 %id)
T16542   RHBDL3.b 4381 to 4657 277 to 1       277/277
(100 %)
0 diff
(100 %id)
DN995527 breast cancer, Mammary gland (cancer tissue) RHBDL3.b 1957 to 2465 8 to 516   tiling clone,   509/516
(98 %)
0 diff
(100 %id)
TI_154134282   RHBDL3.b 4000 to 4648 735 to 89       647/1239
(52 %)
0 diff
(100 %id)
TI_158439418   RHBDL3.b 3905 to 4555 78 to 724       647/698
(92 %)
20 diff
(97.2 %id)
BM694767 eye, RPE and Choroid RHBDL3.b 3400 to 3815 1 to 416       416/416
(100 %)
2 diff
(99.6 %id)
BU731277 eye, RPE and Choroid RHBDL3.b 4075 to 4653 599 to 19   AAA   581/581
(100 %)
2 diff
(99.7 %id)
BM666952 eye, human retina RHBDL3.b 4031 to 4654 643 to 19   AAA   625/625
(100 %)
4 diff
(99.4 %id)
BM695873 eye, human retina RHBDL3.b 3448 to 3697 1 to 250       250/250
(100 %)
0 diff
(100 %id)
BM674460 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid RHBDL3.b 3978 to 4654 695 to 19   AAA   677/677
(100 %)
0 diff
(100 %id)
BM717083 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid RHBDL3.b 2617 to 3296 1 to 679       679/679
(100 %)
2 diff
(99.8 %id)
TI_151777611   RHBDL3.b 2616 to 3436 97 to 925       829/1341
(61 %)
30 diff
(97.8 %id)
W23102 eye, retina RHBDL3.h-u 442 to 793 359 to 7   tiling clone,   353/735
(48 %)
0 diff
(100 %id)
BM926153 brain RHBDL3.b 2602 to 3084 12 to 495       484/1415
(34 %)
15 diff
(99.0 %id)
BM988137 mixed RHBDL3.b 4205 to 4654 468 to 19   AAA   450/450
(100 %)
0 diff
(100 %id)
BU193327 IMAGE:6144769 RHBDL3.gAug10 570 678 IMAGE:6144769     579 67
BU193327 IMAGE:6144769 RHBDL3.gAug10 570 678 IMAGE:6144769     579 67
BC100976 IMAGE:40005245 RHBDL3.aAug10 1262 1262 IMAGE:40005245     1262 0
TI_59380630 INCYTE_603635702 RHBDL3.hAug10-unspliced 657 768 INCYTE_603635702     659 5
DA645984 MAMMA1000338 RHBDL3.fAug10 726 732 MAMMA1000338     731 8
DB360612 MAMMA1000338__1 RHBDL3.iAug10-unspliced 532 1 MAMMA1000338__1     532 10
NM_138328.2 NM_138328 RHBDL3.bAug10 4661 4661 NM_138328     4661 0
T16542 T16542 RHBDL3.bAug10 4657 1 T16542     277 0
DN995527 TC105204 RHBDL3.bAug10 2465 516 TC105204     509 0
DN995527 TC105204 RHBDL3.bAug10 2465 516 TC105204     509 0
TI_154134282 TI_154134282 RHBDL3.bAug10 4648 89 TI_154134282     647 0
TI_158439418 TI_158439418 RHBDL3.bAug10 4555 724 TI_158439418     647 20
BM694767 UI-E-CI1-afr-g-02-0-UI RHBDL3.bAug10 3815 416 UI-E-CI1-afr-g-02-0-UI     416 2
BM694767 UI-E-CI1-afr-g-02-0-UI RHBDL3.bAug10 3815 416 UI-E-CI1-afr-g-02-0-UI     416 2
BU731277 UI-E-CI1-afr-g-02-0-UI RHBDL3.bAug10 4653 19 UI-E-CI1-afr-g-02-0-UI     581 2
BU731277 UI-E-CI1-afr-g-02-0-UI RHBDL3.bAug10 4653 19 UI-E-CI1-afr-g-02-0-UI     581 2
BM666952 UI-E-CL1-aez-h-16-0-UI RHBDL3.bAug10 4654 19 UI-E-CL1-aez-h-16-0-UI     625 4
BM666952 UI-E-CL1-aez-h-16-0-UI RHBDL3.bAug10 4654 19 UI-E-CL1-aez-h-16-0-UI     625 4
BM695873 UI-E-CL1-aez-h-16-0-UI RHBDL3.bAug10 3697 250 UI-E-CL1-aez-h-16-0-UI     250 0
BM695873 UI-E-CL1-aez-h-16-0-UI RHBDL3.bAug10 3697 250 UI-E-CL1-aez-h-16-0-UI     250 0
BM674460 UI-E-EJ0-ahk-i-07-0-UI RHBDL3.bAug10 4654 19 UI-E-EJ0-ahk-i-07-0-UI     677 0
BM674460 UI-E-EJ0-ahk-i-07-0-UI RHBDL3.bAug10 4654 19 UI-E-EJ0-ahk-i-07-0-UI     677 0
BM717083 UI-E-EJ0-ahk-i-07-0-UI RHBDL3.bAug10 3296 679 UI-E-EJ0-ahk-i-07-0-UI     679 2
BM717083 UI-E-EJ0-ahk-i-07-0-UI RHBDL3.bAug10 3296 679 UI-E-EJ0-ahk-i-07-0-UI     679 2
TI_151777611 UIACBCB_UI-E-EJ0-ahk-i-07-0-UI RHBDL3.bAug10 3436 925 UIACBCB_UI-E-EJ0-ahk-i-07-0-UI     829 30
W23102 W23102 RHBDL3.hAug10-unspliced 793 7 W23102     353 0
W23102 W23102 RHBDL3.hAug10-unspliced 793 7 W23102     353 0
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C