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Gene POU3F2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
45 supporting clones for gene POU3F2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DR000102 fetal brain -u 1 to 396 1 to 395   tiling clone,   395/395
(100 %)
4 diff
(99.0 %id)
NM_005604.2   -u 113 to 4198 1 to 4086 exact RefSeq, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 4086/4086
(100 %)
1 diff
(100.0 %id)
CN292837 embryonic stem cells, cell lines H1, H7, andH9 -u 115 to 504 1 to 390   tiling clone,   390/390
(100 %)
0 diff
(100 %id)
Z11933 brain -u 131 to 2068 11 to 1948 G26A S170T     1938/1955
(99 %)
6 diff
(99.7 %id)
BG702545 brain, hippocampus -u 139 to 333 1 to 195       195/206
(94 %)
6 diff
(97.1 %id)
BC051699 Brain, hippocampus -u 144 to 4198 1 to 4052 P207S tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/15 A in genome downstream of last aligned base) 4052/4052
(100 %)
9 diff
(99.8 %id)
AW054773 anaplastic oligodendroglioma, brain -u 241 to 624 384 to 1       384/384
(100 %)
4 diff
(99.0 %id)
DA790517 brain -u 593 to 975 2 to 384   capped   383/383
(100 %)
1 diff
(99.8 %id)
DA799118 brain -u 695 to 1246 2 to 554   tiling clone, capped   553/553
(100 %)
3 diff
(99.5 %id)
CN292836 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells -u 727 to 1177 1 to 452       452/452
(100 %)
4 diff
(99.2 %id)
AL708299 human skeletal muscle -u 1219 to 1464 1 to 251       251/251
(100 %)
7 diff
(97.3 %id)
DA798274 brain -u 1266 to 1560 2 to 296   capped   295/295
(100 %)
0 diff
(100 %id)
BX645336   -u 1503 to 1940 1 to 437       437/437
(100 %)
1 diff
(99.8 %id)
BX093611 anaplastic oligodendroglioma, brain -u 1661 to 1972 323 to 11   AAA Submitted on the opposite strand 313/313
(100 %)
2 diff
(99.4 %id)
DA291918 hippocampus -u 1705 to 2272 2 to 571   capped   570/570
(100 %)
3 diff
(99.5 %id)
DA509342 brain -u 1828 to 2396 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
D55919   -u 1830 to 2067 1 to 238       238/238
(100 %)
1 diff
(99.6 %id)
AL119023 amygdala -u 1849 to 2460 1 to 612   tiling clone,   612/612
(100 %)
0 diff
(100 %id)
C15289   -u 1977 to 2376 8 to 406       399/406
(98 %)
6 diff
(98.6 %id)
DA492037 brain -u 2024 to 2484 2 to 464   capped   463/463
(100 %)
2 diff
(99.6 %id)
DA530939 brain POU3F2.b-u 1 to 620 2 to 621   tiling clone, capped   620/620
(100 %)
0 diff
(100 %id)
CX870050 embryonic stem POU3F2.b-u 9 to 558 1 to 550       550/550
(100 %)
0 diff
(100 %id)
BQ423615 melanotic melanoma, skin POU3F2.b-u 75 to 917 1 to 844   tiling clone,   844/844
(100 %)
3 diff
(99.7 %id)
Z46167 brain, total brain POU3F2.b-u 365 to 684 1 to 320       320/320
(100 %)
0 diff
(100 %id)
F08761 brain, total brain POU3F2.b-u 365 to 683 1 to 319       319/319
(100 %)
0 diff
(100 %id)
F05989 brain, total brain POU3F2.b-u 422 to 662 1 to 242       242/247
(97 %)
3 diff
(98.8 %id)
BF978474 melanotic melanoma, high MDR, skin POU3F2.b-u 471 to 1133 1 to 675   tiling clone,   675/832
(81 %)
30 diff
(96.4 %id)
TI_57241692   POU3F2.b-u 752 to 1726 33 to 999       967/1069
(90 %)
62 diff
(94.3 %id)
BI914245 brain POU3F2.b-u 756 to 1726 1 to 964       964/1034
(93 %)
61 diff
(94.2 %id)
BU183021 melanotic melanoma, skin POU3F2.b-u 779 to 1564 1 to 792   tiling clone,   792/816
(97 %)
10 diff
(98.8 %id)
CX867004 embryonic stem POU3F2.b-u 1193 to 2036 1 to 844   tiling clone, to resequence,   844/844
(100 %)
0 diff
(100 %id)
BE765714 nervous_tumor POU3F2.b-u 1208 to 1674 1 to 467       467/467
(100 %)
3 diff
(99.4 %id)
AL138356 melanoma (MeWo cell line) POU3F2.b-u 1399 to 1710 1 to 313       313/318
(98 %)
7 diff
(97.8 %id)
AI655029 pooled germ cell tumors POU3F2.b-u 1489 to 1989 502 to 1       502/502
(100 %)
6 diff
(98.9 %id)
BE855760 brain, glioblastoma (pooled) POU3F2.b-u 1512 to 2039 528 to 1       528/528
(100 %)
0 diff
(100 %id)
BF983322 duodenal adenocarcinoma, cell line, small intestine POU3F2.b-u 1537 to 1989 1 to 453   AAA   453/453
(100 %)
0 diff
(100 %id)
DB566431 hypothalamus POU3F2.b-u 1538 to 1989 3 to 455     Submitted on the opposite strand 453/455
(99 %)
6 diff
(98.7 %id)
Z41794 brain, total brain POU3F2.b-u 1762 to 2042 281 to 1       281/281
(100 %)
1 diff
(99.7 %id)
F05048 brain, total brain POU3F2.b-u 1762 to 2042 281 to 1   tiling clone,   281/281
(100 %)
0 diff
(100 %id)
F02230 brain, total brain POU3F2.b-u 1828 to 1987 160 to 1       160/160
(100 %)
1 diff
(99.4 %id)
CX866919 embryonic stem POU3F2.b-u 2046 to 2720 703 to 29   tiling clone, to resequence, AAA   675/676
(99 %)
0 diff
(100 %id)
N67274 cochlea, ear POU3F2.b-u 2049 to 2218 171 to 2       170/171
(99 %)
0 diff
(100 %id)
DA506384 brain POU3F2.b-u 2190 to 2743 2 to 554   tiling clone, capped   553/553
(100 %)
3 diff
(99.5 %id)
DB316101 brain POU3F2.b-u 3467 to 3988 523 to 1   tiling clone,   523/523
(100 %)
2 diff
(99.7 %id)
AA908924 Dorsal root ganglion, peripheral nervous system POU3F2.b-u 3696 to 3996 306 to 6   tiling clone,   301/306
(98 %)
0 diff
(100 %id)
CN292835 embryonic stem cells, cell lines H1, H7, andH9 Gene POU3F2, variant not shown         Suspected internal deletion, this clone was ignored    
AK095588 brain Gene POU3F2, variant not shown       available from FLJ, Suspected internal deletion, suspected internal deletion, this clone was ignored    
DB315406 brain Gene POU3F2, variant not shown         Suspected internal deletion, this clone was ignored    
DA491157 brain Gene POU3F2, variant not shown       capped Suspected internal deletion, this clone was ignored    
BI755719 brain Gene POU3F2, variant not shown         This clone was ignored    
DA774216 brain Gene POU3F2, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a-u, .b-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI