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Gene OIT3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
55 supporting clones for gene OIT3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA340890 Kidney .a 1500 to 1669 1 to 170       170/170
(100 %)
0 diff
(100 %id)
AK096435 tongue .a 25 to 2385 1 to 2361 exact available from FLJ,   2361/2361
(100 %)
2 diff
(100.0 %id)
AW956404   .a 1844 to 2384 541 to 1     Submitted on the opposite strand 541/583
(92 %)
11 diff
(98.2 %id)
AY013707 Liver .a 169 to 2386 1 to 2217 exact AAA   2217/2217
(100 %)
2 diff
(100.0 %id)
AY358339   .a 47 to 2385 1 to 2339 exact tiling clone,   2339/2339
(100 %)
0 diff
(100 %id)
BC126440 Lung, PCR rescued clones .c 3 to 1604 1 to 1602 exact tiling clone,   1602/1602
(100 %)
0 diff
(100 %id)
TI_1520872925   .c 307 to 1468 1162 to 4       1159/1179
(98 %)
22 diff
(98.2 %id)
TI_1520874473   .c 541 to 1605 1123 to 56     Submitted on the opposite strand 1068/1224
(87 %)
8 diff
(99.4 %id)
TI_1520874849   .a 28 to 1032 64 to 1068     Submitted on the opposite strand 1005/1263
(79 %)
10 diff
(99.3 %id)
TI_1520875209   .c 937 to 1605 728 to 56     Submitted on the opposite strand 671/762
(88 %)
11 diff
(98.6 %id)
TI_1520876489   .a 1656 to 2046 11 to 399       389/1163
(33 %)
7 diff
(99.4 %id)
TI_1520876491   .c 473 to 1583 11 to 1113       1103/1183
(93 %)
20 diff
(98.4 %id)
BF919192 nervous_tumor .d 575 to 951 378 to 2   tiling clone, Submitted on the opposite strand 377/378
(99 %)
0 diff
(100 %id)
BX279604 liver and spleen .a 950 to 1434 1 to 485       485/485
(100 %)
0 diff
(100 %id)
AV650082 corresponding non cancerous liver tissue .d 1 to 678 1 to 674 P171X S173F tiling clone, Submitted on the opposite strand 678/674
(100 %)
13 diff
(98.1 %id)
AV651182 corresponding non cancerous liver tissue .a 1048 to 1447 1 to 400     Submitted on the opposite strand 400/400
(100 %)
0 diff
(100 %id)
AV651191 corresponding non cancerous liver tissue .a 1048 to 1476 1 to 429     Submitted on the opposite strand 429/429
(100 %)
0 diff
(100 %id)
AV651225 corresponding non cancerous liver tissue .a 1048 to 1461 1 to 414     Submitted on the opposite strand 414/414
(100 %)
0 diff
(100 %id)
AV651238 corresponding non cancerous liver tissue .a 1048 to 1449 1 to 402     Submitted on the opposite strand 402/402
(100 %)
0 diff
(100 %id)
AV651252 corresponding non cancerous liver tissue .d 1 to 687 1 to 681 F168X P171X S173F   Submitted on the opposite strand 685/681
(100 %)
11 diff
(98.4 %id)
AV651717 corresponding non cancerous liver tissue .d 1 to 633 1 to 631 P139A T170N P171H S173F   Submitted on the opposite strand 631/682
(92 %)
17 diff
(97.6 %id)
AV651977 corresponding non cancerous liver tissue .a 1000 to 1423 1 to 424     Submitted on the opposite strand 424/425
(99 %)
1 diff
(99.8 %id)
BJ996938 hepatoblastoma .c 184 to 648 1 to 465       465/465
(100 %)
0 diff
(100 %id)
BJ996939 hepatoblastoma .c 1510 to 1908 399 to 1   tiling clone,   399/399
(100 %)
0 diff
(100 %id)
T40097 Liver .a 752 to 852 1 to 101       101/101
(100 %)
0 diff
(100 %id)
T41008 Liver .a 2068 to 2389 323 to 1       323/327
(98 %)
8 diff
(97.6 %id)
T70583 liver and spleen .b 1512 to 1806 295 to 1   tiling clone, to resequence,   295/295
(100 %)
2 diff
(99.4 %id)
T70846 liver and spleen .b 1 to 371 1 to 379   tiling clone, to resequence,   379/380
(99 %)
14 diff
(96.4 %id)
T85373 liver and spleen .b 1458 to 1826 386 to 1   tiling clone,   386/429
(89 %)
15 diff
(96.6 %id)
T85471 liver and spleen .b 1 to 292 1 to 298   tiling clone,   298/320
(93 %)
7 diff
(97.9 %id)
R02567 liver and spleen .a 2020 to 2388 379 to 1       379/406
(93 %)
11 diff
(97.3 %id)
R02686 liver and spleen .a 1048 to 1416 1 to 379       379/384
(98 %)
18 diff
(95.4 %id)
R17937.
matches multiple genes
liver and spleen .e-u 1 to 352 357 to 1 Y4X W23C E25S R27G S28V ... tiling clone, also hits gene SERPINA4andSERPINA5andSERPINA3 357/386
(92 %)
14 diff
(96.4 %id)
R18037.
matches multiple genes
liver and spleen .a 169 to 355 1 to 187     also hits gene dosnee 187/221
(84 %)
5 diff
(97.8 %id)
R10408 liver and spleen .a 1347 to 1715 1 to 374       374/414
(90 %)
8 diff
(98.1 %id)
R11486 liver and spleen .a 1950 to 2389 446 to 1   tiling clone,   446/446
(100 %)
9 diff
(98.0 %id)
R97961 liver and spleen .a 1616 to 2068 1 to 465       465/469
(99 %)
20 diff
(95.8 %id)
R97962 liver and spleen .a 2070 to 2272 210 to 8       203/218
(93 %)
0 diff
(100 %id)
R98257 liver and spleen .a 1819 to 2265 1 to 461       461/468
(98 %)
18 diff
(96.2 %id)
AF075085   .a 1801 to 2383 1 to 583       583/583
(100 %)
0 diff
(100 %id)
H53186 liver and spleen .a 1802 to 2181 1 to 386       386/467
(82 %)
14 diff
(97.1 %id)
H58280 liver and spleen .a 951 to 1326 1 to 381       381/408
(93 %)
7 diff
(98.3 %id)
H58673 liver and spleen .a 2048 to 2384 338 to 1       338/338
(100 %)
2 diff
(99.5 %id)
H94467 liver and spleen .a 2016 to 2387 374 to 1       374/374
(100 %)
2 diff
(99.5 %id)
H94560 liver and spleen .a 1324 to 1610 1 to 292       292/329
(88 %)
8 diff
(97.6 %id)
R85632 liver and spleen .a 1901 to 2375 488 to 1       488/494
(98 %)
14 diff
(97.2 %id)
AA693997 liver and spleen .a 1984 to 2333 350 to 1       350/350
(100 %)
1 diff
(99.8 %id)
AA702703 liver and spleen .a 1863 to 2309 513 to 67       447/513
(87 %)
0 diff
(100 %id)
AA677443 liver and spleen .a 1953 to 2333 382 to 1       382/382
(100 %)
1 diff
(99.8 %id)
AA430114   .a 1954 to 2333 380 to 1       380/380
(100 %)
0 diff
(100 %id)
AI096996 heart .a 1797 to 2172 1 to 377     Submitted on the opposite strand 377/377
(100 %)
11 diff
(97.1 %id)
AI287565 placenta .a 2027 to 2333 307 to 1       307/307
(100 %)
0 diff
(100 %id)
AW190600 adenocarcinoma, Pancreas .a 1966 to 2392 434 to 6       429/434
(98 %)
0 diff
(100 %id)
AW590571 pooled germ cell tumors .a 1884 to 2333 450 to 1       450/450
(100 %)
0 diff
(100 %id)
BF592796 pooled germ cell tumors .a 2061 to 2333 273 to 1       273/273
(100 %)
0 diff
(100 %id)
BI769628.
matches multiple genes
Lung, Spleen, fetal, pooled, pooled lung and spleen .a 189 to 676 1 to 497   available from MGC, also hits gene SOX18 497/1132
(43 %)
23 diff
(98.0 %id)
TI_57179805   .a 189 to 676 30 to 526       497/1161
(42 %)
21 diff
(98.2 %id)
DA643072 Liver .a 165 to 735 10 to 580   capped   571/571
(100 %)
0 diff
(100 %id)
NM_152635.1   .a 25 to 2385 1 to 2361 exact RefSeq,   2361/2361
(100 %)
2 diff
(100.0 %id)
DA765455 tongue .c 1 to 579 2 to 580   tiling clone, capped   579/580
(99 %)
1 diff
(99.9 %id)
DB325457 tongue .c 1383 to 1944 563 to 1   tiling clone,   563/563
(100 %)
2 diff
(99.7 %id)
BP339389 Spleen .a 200 to 676 1 to 477       477/566
(84 %)
6 diff
(99.0 %id)
DA979981 synovial membrane tissue from rheumatioidarthritis .a 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
DR003928 Liver .a 188 to 887 1 to 701       701/701
(100 %)
3 diff
(99.6 %id)
AI700845 Kidney .a 188 to 887 1 to 701     Submitted on the opposite strand 701/701
(100 %)
3 diff
(99.6 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC