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Gene CCDC41TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
147 supporting clones for gene CCDC41 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA770312   CCDC41.k 854 to 1088 235 to 1       235/235
(100 %)
0 diff
(100 %id)
AA360577   CCDC41.b 2192 to 2491 1 to 300       300/300
(100 %)
1 diff
(99.7 %id)
AF155115   CCDC41.a 284 to 3219 1 to 2933 Q113K K114N L115W E116N L117C ... tiling clone,   2933/2936
(99 %)
8 diff
(99.8 %id)
AK056316   CCDC41.b 105 to 2234 1 to 2130   tiling clone, available from FLJ,   2130/2130
(100 %)
1 diff
(100.0 %id)
AK093735 thymus CCDC41.j-u 1191 to 3751 1 to 2561 exact tiling clone, available from FLJ,   2561/2561
(100 %)
2 diff
(100.0 %id)
AW383162 head_neck CCDC41.j-u 2615 to 2905 1 to 290       290/290
(100 %)
2 diff
(99.4 %id)
AW965913   CCDC41.b 2193 to 2813 1 to 622       622/624
(99 %)
9 diff
(98.6 %id)
CB152170 brain CCDC41.j-u 2316 to 2909 1 to 594       594/594
(100 %)
1 diff
(99.9 %id)
AU186068 skin CCDC41.u-u 1 to 213 1 to 213 exact tiling clone,   213/213
(100 %)
1 diff
(99.6 %id)
BC125087 PCR rescued clones CCDC41.c 1 to 2166 1 to 2166 exact tiling clone,   2166/2166
(100 %)
1 diff
(100.0 %id)
BF745376 breast CCDC41.b 304 to 658 17 to 370       354/378
(93 %)
11 diff
(97.1 %id)
BG181633   CCDC41.k 266 to 1050 1 to 778 R44P L45P     778/801
(97 %)
38 diff
(95.3 %id)
BG191296   CCDC41.k 265 to 1091 11 to 835 exact     824/944
(87 %)
33 diff
(96.6 %id)
BG202317   CCDC41.k 310 to 950 1 to 647 exact     647/816
(79 %)
32 diff
(96.1 %id)
BG207542   CCDC41.k 266 to 1039 1 to 770 V18D K43N R44I     770/779
(98 %)
45 diff
(94.3 %id)
BG211737   CCDC41.k 316 to 902 8 to 594 G60D S61L S62P G63E E64N AAA   587/594
(98 %)
17 diff
(97.2 %id)
BG219143   CCDC41.k 274 to 1057 1 to 781 exact     781/784
(99 %)
20 diff
(97.5 %id)
DA108098 cerebellum CCDC41.j-u 1 to 553 2 to 554   tiling clone, to resequence, capped   553/553
(100 %)
0 diff
(100 %id)
DB299654 cerebellum CCDC41.j-u 3251 to 3789 539 to 1   to resequence,   539/539
(100 %)
0 diff
(100 %id)
DA108100 cerebellum CCDC41.p-u 173 to 725 2 to 554 exact tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
BX283278 lung, mucoepidermoid carcinoma CCDC41.b 2137 to 2521 1 to 385       385/385
(100 %)
0 diff
(100 %id)
BX283860 muscle (skeletal) CCDC41.b 465 to 864 1 to 400       400/400
(100 %)
0 diff
(100 %id)
F07672 brain, total brain CCDC41.d 1545 to 1805 1 to 261       261/261
(100 %)
0 diff
(100 %id)
Z40717 brain, total brain CCDC41.d 2820 to 3123 304 to 1       304/304
(100 %)
0 diff
(100 %id)
CN363168 embryonic stem cells, DMSO-treated H9 cellline CCDC41.l 616 to 1246 9 to 639 exact tiling clone,   631/639
(98 %)
6 diff
(99.1 %id)
CN363169 embryonic stem cells, DMSO-treated H9 cellline CCDC41.b 1163 to 1697 1 to 535       535/535
(100 %)
1 diff
(99.9 %id)
CR741605   CCDC41.j-u 1830 to 1999 1 to 170       170/170
(100 %)
0 diff
(100 %id)
DA440413 tongue, tumor tissue CCDC41.a 121 to 690 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
CV333237 head_neck CCDC41.d 1572 to 2011 441 to 1     Submitted on the opposite strand 441/441
(100 %)
11 diff
(97.6 %id)
AL705306 human skeletal muscle CCDC41.m-u 424 to 959 1 to 536   tiling clone,   536/539
(99 %)
2 diff
(99.7 %id)
AL703827 human skeletal muscle CCDC41.r 1 to 601 1 to 601 E54D tiling clone,   601/601
(100 %)
5 diff
(99.2 %id)
AL705616 human skeletal muscle CCDC41.l 1 to 641 1 to 641   tiling clone,   641/645
(99 %)
4 diff
(99.4 %id)
DN918017   CCDC41.b 914 to 1542 628 to 2       627/628
(99 %)
6 diff
(99.1 %id)
DT217346 brain CCDC41.b 2163 to 2809 1 to 647       647/647
(100 %)
1 diff
(99.9 %id)
EB362520 eye, lens CCDC41.k 976 to 1678 703 to 1   tiling clone,   703/703
(100 %)
2 diff
(99.8 %id)
DA488692 brain CCDC41.s 1 to 568 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
FN054319 breast carcinoma CCDC41.j-u 2453 to 2537 1 to 85       85/85
(100 %)
3 diff
(96.5 %id)
FN065149 breast carcinoma CCDC41.b 650 to 743 1 to 90       92/90
(102 %)
6 diff
(93.4 %id)
FN077105 breast carcinoma CCDC41.k 1396 to 1504 1 to 106       106/106
(100 %)
3 diff
(97.2 %id)
FN131617 breast carcinoma CCDC41.va 1 to 83 1 to 83 exact tiling clone,   83/84
(98 %)
1 diff
(98.9 %id)
FN146057 breast carcinoma CCDC41.p-u 228 to 320 1 to 91       91/91
(100 %)
3 diff
(96.8 %id)
G36761   CCDC41.k 605 to 1094 500 to 8     Submitted on the opposite strand 493/500
(98 %)
0 diff
(100 %id)
DB449066 testis CCDC41.b 42 to 476 1 to 435       435/435
(100 %)
0 diff
(100 %id)
DB514117 testis CCDC41.d 2650 to 3114 1 to 467     Submitted on the opposite strand 467/469
(99 %)
3 diff
(99.4 %id)
DA546072   CCDC41.t 1 to 522 2 to 524   tiling clone, capped   523/523
(100 %)
1 diff
(99.9 %id)
DA570439 whole embryo, mainly head CCDC41.j-u 2318 to 3197 2 to 877   capped   876/876
(100 %)
16 diff
(98.2 %id)
DB357207 whole embryo, mainly head CCDC41.j-u 3241 to 3789 542 to 1       542/544
(99 %)
9 diff
(98.4 %id)
BP418671 small intestine CCDC41.k 319 to 832 1 to 517 exact   Submitted on the opposite strand 517/517
(100 %)
3 diff
(99.5 %id)
W52480 heart CCDC41.k 540 to 1094 563 to 8   fully sequenced,   556/563
(98 %)
0 diff
(100 %id)
W52777 heart CCDC41.k 2 to 547 1 to 546   tiling clone, fully sequenced,   546/546
(100 %)
12 diff
(97.9 %id)
W56724 heart CCDC41.k 1 to 314 1 to 318   tiling clone,   318/322
(98 %)
9 diff
(97.3 %id)
W56770 heart CCDC41.k 680 to 1094 421 to 1       421/435
(96 %)
9 diff
(98.0 %id)
AA699482 liver and spleen CCDC41.j-u 3415 to 3801 387 to 1   tiling clone,   387/387
(100 %)
0 diff
(100 %id)
AA164603   CCDC41.e 1 to 330 10 to 343   tiling clone,   334/343
(97 %)
15 diff
(95.7 %id)
AA164604   CCDC41.e 566 to 927 364 to 1   tiling clone,   364/364
(100 %)
5 diff
(98.7 %id)
AA256279 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CCDC41.j-u 2840 to 3209 1 to 370   fully sequenced,   370/370
(100 %)
0 diff
(100 %id)
AA256280 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CCDC41.j-u 3179 to 3527 342 to 1   fully sequenced,   342/342
(100 %)
1 diff
(99.8 %id)
AA291151 germinal center B cell CCDC41.j-u 3423 to 3789 368 to 1       368/368
(100 %)
1 diff
(99.8 %id)
AA459746   CCDC41.j-u 1830 to 2225 1 to 395       395/395
(100 %)
1 diff
(99.8 %id)
AA461328   CCDC41.j-u 3366 to 3792 428 to 1       428/428
(100 %)
3 diff
(99.3 %id)
AA521145 germinal center B cell CCDC41.j-u 3237 to 3798 561 to 1       561/564
(99 %)
3 diff
(99.5 %id)
AA515608 colon CCDC41.j-u 3220 to 3529 310 to 1       310/310
(100 %)
0 diff
(100 %id)
AA568651 colon, colon tumor RER+ CCDC41.k 898 to 1257 360 to 1   tiling clone,   360/360
(100 %)
0 diff
(100 %id)
AA747953 alveolar rhabdomyosarcoma CCDC41.p-u 1 to 296 1 to 295   tiling clone,   295/302
(97 %)
5 diff
(98.4 %id)
AA742973 germinal center B cell CCDC41.j-u 3417 to 3798 383 to 1       383/383
(100 %)
1 diff
(99.8 %id)
AA814246 germinal center B cell CCDC41.k 747 to 1092 360 to 15   AAA   346/346
(100 %)
5 diff
(98.6 %id)
AA732557 germinal center B cell CCDC41.k 876 to 1092 231 to 15   AAA   217/217
(100 %)
0 diff
(100 %id)
AA765427 germinal center B cell CCDC41.k 765 to 1092 342 to 15   AAA   328/328
(100 %)
1 diff
(99.7 %id)
AA873647 germinal center B cell CCDC41.k 777 to 1092 340 to 25   AAA   316/316
(100 %)
0 diff
(100 %id)
AA865009 germinal center B cell CCDC41.k 1007 to 1092 100 to 15   AAA   86/86
(100 %)
0 diff
(100 %id)
AA863014 Kidney CCDC41.k 634 to 1092 459 to 1       459/459
(100 %)
0 diff
(100 %id)
AA987231 carcinoid, lung CCDC41.g 677 to 1176 500 to 1   tiling clone,   500/500
(100 %)
2 diff
(99.6 %id)
AI167511 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CCDC41.j-u 3075 to 3527 452 to 1       452/452
(100 %)
1 diff
(99.8 %id)
AI139274 uterus CCDC41.k 590 to 1092 502 to 1       502/502
(100 %)
2 diff
(99.7 %id)
AI424996 pooled CCDC41.j-u 3283 to 3789 508 to 1       508/508
(100 %)
1 diff
(99.9 %id)
AI690119 carcinoid, lung CCDC41.g 730 to 1176 447 to 1       447/447
(100 %)
1 diff
(99.8 %id)
AI651679 pooled germ cell tumors CCDC41.d 2672 to 3123 460 to 9       452/460
(98 %)
0 diff
(100 %id)
AI867146 carcinoid, lung CCDC41.j-u 1201 to 1520 320 to 1       320/320
(100 %)
1 diff
(99.7 %id)
AI890198 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus CCDC41.k 578 to 1092 513 to 1       513/515
(99 %)
2 diff
(99.7 %id)
AI927290 Kidney CCDC41.k 436 to 770 335 to 1       335/335
(100 %)
0 diff
(100 %id)
AW079265 colon, juvenile granulosa tumor CCDC41.k 693 to 1092 400 to 1       400/400
(100 %)
0 diff
(100 %id)
AW197843 pooled CCDC41.k 334 to 760 430 to 4 exact     427/430
(99 %)
0 diff
(100 %id)
AW438818 serous papillary carcinoma, high grade, 2pooled tumors, uterus CCDC41.k 658 to 1094 437 to 1       437/437
(100 %)
0 diff
(100 %id)
AW340406 pooled CCDC41.k 607 to 1094 488 to 2       487/488
(99 %)
0 diff
(100 %id)
AW341523 pooled CCDC41.k 569 to 1094 527 to 2       526/527
(99 %)
0 diff
(100 %id)
AW592268 pooled CCDC41.d 2684 to 3123 441 to 2   tiling clone,   440/441
(99 %)
0 diff
(100 %id)
BE350623 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney CCDC41.d 2850 to 3117 268 to 1       268/268
(100 %)
0 diff
(100 %id)
BE219562 carcinoid, lung CCDC41.k 1256 to 1672 417 to 1   tiling clone,   417/417
(100 %)
1 diff
(99.8 %id)
BF056968 pooled germ cell tumors CCDC41.h 1 to 491 492 to 2 exact tiling clone,   491/492
(99 %)
0 diff
(100 %id)
BF196282 fibrotheoma, ovary CCDC41.j-u 3370 to 3751 382 to 1       382/382
(100 %)
3 diff
(99.3 %id)
BF132218 hypernephroma, Kidney CCDC41.a 141 to 695 1 to 565       565/620
(91 %)
31 diff
(95.0 %id)
BC011009 Brain, primitive neuroectodermal CCDC41.n 1 to 936 4 to 939 exact tiling clone, available from MGC, AAA   939/939
(100 %)
3 diff
(99.7 %id)
BF695722 brain, primitive neuroectoderm CCDC41.b 121 to 698 1 to 595   available from MGC,   531/894
(59 %)
37 diff
(95.9 %id)
BF132885 lung, mucoepidermoid carcinoma CCDC41.b 2158 to 2872 1 to 705       705/857
(82 %)
26 diff
(97.0 %id)
BF574606 muscle (skeletal) CCDC41.b 465 to 1059 1 to 591       591/600
(98 %)
8 diff
(98.7 %id)
BG110052 Bone, osteosarcoma, cell line CCDC41.o-u 1 to 732 1 to 736 I18N K19* tiling clone,   736/972
(75 %)
23 diff
(97.7 %id)
BG682680 skin, squamous cell carcinoma CCDC41.b 449 to 1028 29 to 609       581/612
(94 %)
8 diff
(98.7 %id)
BC032943 testis CCDC41.d 1 to 3116 6 to 3121 exact tiling clone, available from MGC, AAA   3121/3121
(100 %)
7 diff
(99.8 %id)
BG718777 testis CCDC41.a 34 to 714 1 to 681   tiling clone, available from MGC,   681/682
(99 %)
4 diff
(99.5 %id)
BG772972 testis CCDC41.l 37 to 624 1 to 588   tiling clone,   588/588
(100 %)
9 diff
(98.5 %id)
BG767735 melanotic melanoma, high MDR (cell line), skin CCDC41.j-u 2422 to 2966 1 to 555       555/809
(68 %)
20 diff
(97.6 %id)
BI820458 pooled brain, lung, testis CCDC41.n 48 to 860 1 to 819       819/819
(100 %)
7 diff
(99.2 %id)
BI821840 pooled brain, lung, testis CCDC41.j-u 1797 to 2809 1 to 1003 exact     1003/1006
(99 %)
32 diff
(96.9 %id)
BC063398 Brain, adult, 6 pooled whole brains CCDC41.q 6 to 644 1 to 639 exact tiling clone, available from MGC, AAA   639/639
(100 %)
0 diff
(100 %id)
BI753855 brain CCDC41.q 1 to 646 1 to 649 exact tiling clone, available from MGC,   649/692
(93 %)
6 diff
(99.2 %id)
BI771416 pooled lung and spleen CCDC41.b 1749 to 2605 1 to 853       853/854
(99 %)
7 diff
(99.2 %id)
BM462379 leiomyosarcoma, uterus CCDC41.b 1087 to 1888 1 to 805       805/1016
(79 %)
12 diff
(98.9 %id)
CB409433 maxilla, pooled CCDC41.m-u 1 to 441 441 to 1 F24S V31I tiling clone, Submitted on the opposite strand 441/463
(95 %)
4 diff
(99.2 %id)
BQ896942 ductal carcinoma, cell line, Pancreas CCDC41.d 2689 to 3116 1 to 427   AAA   427/427
(100 %)
1 diff
(99.8 %id)
BC053614 Eye, retinoblastoma CCDC41.b 45 to 3170 1 to 3126 L256F A257G E258* tiling clone, available from MGC, AAA   3126/3126
(100 %)
2 diff
(100.0 %id)
BU176453 eye, retinoblastoma CCDC41.b 47 to 929 1 to 900   available from MGC,   898/952
(94 %)
36 diff
(96.3 %id)
BC107746 testis CCDC41.f -10 to 872 1 to 883 E211K R212K N213K I215K Q216K tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 883/890
(99 %)
12 diff
(98.7 %id)
BU854339 testis CCDC41.f -9 to 754 1 to 771       771/783
(98 %)
22 diff
(97.2 %id)
CD643212 Embryonic Stem cells CCDC41.m-u 133 to 655 6 to 518   tiling clone,   513/700
(73 %)
28 diff
(96.0 %id)
CF551806 Pooled muscle (cardiac and skeletal) CCDC41.j-u 3084 to 3760 1 to 677       677/678
(99 %)
3 diff
(99.6 %id)
CF121593 lymph CCDC41.g 649 to 1341 1 to 693   tiling clone,   693/693
(100 %)
9 diff
(98.8 %id)
BC125086 PCR rescued clones CCDC41.b 311 to 2459 1 to 2149       2149/2149
(100 %)
1 diff
(100.0 %id)
TI_57218968   CCDC41.q 16 to 646 84 to 717 exact AAA   634/750
(84 %)
6 diff
(99.2 %id)
TI_57197768   CCDC41.b 168 to 975 37 to 855       813/855
(95 %)
16 diff
(98.2 %id)
TI_57198537   CCDC41.j-u 1797 to 2809 39 to 1041 exact     1003/1044
(96 %)
32 diff
(97.0 %id)
TI_57182803   CCDC41.b 1749 to 2605 31 to 883       853/884
(96 %)
13 diff
(98.6 %id)
N56300   CCDC41.d 2712 to 2956 1 to 244       244/244
(100 %)
5 diff
(98.0 %id)
CB160132 Liver CCDC41.b 1545 to 2067 1 to 523       523/523
(100 %)
0 diff
(100 %id)
NM_016122.2   CCDC41.a 1 to 3223 1 to 3223 exact RefSeq, AAA   3223/3223
(100 %)
0 diff
(100 %id)
NM_001042399.1   CCDC41.b 1 to 3170 1 to 3170 exact RefSeq, AAA   3170/3170
(100 %)
0 diff
(100 %id)
DA704190   CCDC41.b 106 to 619 2 to 515   capped   514/514
(100 %)
3 diff
(99.5 %id)
DB323887   CCDC41.b 1705 to 2234 531 to 1       531/531
(100 %)
3 diff
(99.5 %id)
BM758138 stomach CCDC41.b 907 to 1421 1 to 515       515/515
(100 %)
1 diff
(99.9 %id)
BM836247 stomach CCDC41.b 907 to 1258 1 to 352       352/352
(100 %)
5 diff
(98.6 %id)
BM834532 stomach CCDC41.b 1822 to 2304 1 to 483       483/483
(100 %)
5 diff
(99.0 %id)
DN993019 brain, whole brain CCDC41.b 52 to 797 1 to 746       746/746
(100 %)
8 diff
(99.0 %id)
BM151397 leukopheresis CCDC41.p-u 2 to 397 18 to 411   tiling clone,   394/414
(95 %)
11 diff
(97.4 %id)
DB030850 testis CCDC41.b 43 to 584 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DB086346 testis CCDC41.b 8 to 562 2 to 557   tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
DB095273 testis CCDC41.i 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DB098358 testis CCDC41.a 39 to 615 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DB108647 thymus CCDC41.j-u 1192 to 1758 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DB343149 thymus CCDC41.j-u 3220 to 3751 532 to 1       532/532
(100 %)
1 diff
(99.9 %id)
TI_149286112   CCDC41.d 2511 to 3116 690 to 84   tiling clone, AAA   607/772
(78 %)
38 diff
(95.1 %id)
TI_154109780   CCDC41.k 266 to 1092 937 to 117 S6X E57G AAA   821/906
(90 %)
34 diff
(96.3 %id)
TI_154180760   CCDC41.g 655 to 1467 72 to 885   tiling clone,   814/814
(100 %)
16 diff
(98.1 %id)
DB187582 liver, tumor tissue CCDC41.a 41 to 609 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB207728 trachea CCDC41.j-u 1183 to 1650 2 to 469   tiling clone, capped   468/468
(100 %)
3 diff
(99.4 %id)
BU680876 lung CCDC41.d 2688 to 3116 447 to 19   AAA   429/430
(99 %)
2 diff
(99.6 %id)
BU608784 Human Lung Epithelial cells, lung CCDC41.k 330 to 1092 781 to 19 S6X tiling clone, AAA   763/770
(99 %)
4 diff
(99.5 %id)
BM719639 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid CCDC41.j-u 3471 to 3789 1 to 320   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 320/320
(100 %)
1 diff
(99.7 %id)
BQ185790 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid CCDC41.j-u 3471 to 3789 1 to 320   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 320/320
(100 %)
1 diff
(99.7 %id)
CA448017 Chondrosarcoma, Left Pelvis CCDC41.k 573 to 1092 539 to 19   AAA   521/521
(100 %)
16 diff
(97.0 %id)
CA424794 cell lines, Chondrosarcoma CCDC41.g 1 to 704 722 to 19 N18T tiling clone, AAA   704/704
(100 %)
1 diff
(99.9 %id)
BU616924 Cell Line, Chondrosarcoma CCDC41.k 498 to 1092 613 to 19   AAA   595/595
(100 %)
0 diff
(100 %id)
TI_151763931   CCDC41.j-u 3471 to 3813 407 to 64   tiling clone,   344/1045
(32 %)
0 diff
(100 %id)
DA176184 amygdala CCDC41.b 106 to 619 2 to 515   capped This clone was ignored 514/514
(100 %)
3 diff
(99.5 %id)
DB302764 amygdala CCDC41.b 1705 to 2234 531 to 1     This clone was ignored 531/531
(100 %)
3 diff
(99.5 %id)
BX106846 pooled germ cell tumors CCDC41.b 907 to 1421 1 to 515     Suspected internal deletion, this clone was ignored 515/515
(100 %)
1 diff
(99.9 %id)
AA194904 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CCDC41.b 907 to 1258 1 to 352     This clone was ignored 352/352
(100 %)
5 diff
(98.6 %id)
AA194905 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CCDC41.b 1822 to 2304 1 to 483     This clone was ignored 483/483
(100 %)
5 diff
(99.0 %id)
BM083812 pooled germ cell tumors CCDC41.b 52 to 797 1 to 746     Suspected internal deletion, this clone was ignored 746/746
(100 %)
8 diff
(99.0 %id)
DA756038   CCDC41.b 52 to 797 1 to 746   capped This clone was ignored 746/746
(100 %)
8 diff
(99.0 %id)
DB325207   CCDC41.p-u 2 to 397 18 to 411   tiling clone, This clone was ignored 394/414
(95 %)
11 diff
(97.4 %id)
DB030850 testis CCDC41.b 43 to 584 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DB086346 testis CCDC41.b 8 to 562 2 to 557   tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
DB095273 testis CCDC41.i 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DB098358 testis CCDC41.a 39 to 615 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DB108647 thymus CCDC41.j-u 1192 to 1758 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DB343149 thymus CCDC41.j-u 3220 to 3751 532 to 1       532/532
(100 %)
1 diff
(99.9 %id)
TI_149286112   CCDC41.d 2511 to 3116 690 to 84   tiling clone, AAA   607/772
(78 %)
38 diff
(95.1 %id)
TI_154109780   CCDC41.k 266 to 1092 937 to 117 S6X E57G AAA   821/906
(90 %)
34 diff
(96.3 %id)
TI_154180760   CCDC41.g 655 to 1467 72 to 885   tiling clone,   814/814
(100 %)
16 diff
(98.1 %id)
DB187582 liver, tumor tissue CCDC41.a 41 to 609 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB207728 trachea CCDC41.j-u 1183 to 1650 2 to 469   tiling clone, capped   468/468
(100 %)
3 diff
(99.4 %id)
BU680876 lung CCDC41.d 2688 to 3116 447 to 19   AAA   429/430
(99 %)
2 diff
(99.6 %id)
BU608784 Human Lung Epithelial cells, lung CCDC41.k 330 to 1092 781 to 19 S6X tiling clone, AAA   763/770
(99 %)
4 diff
(99.5 %id)
BU608784 Human Lung Epithelial cells, lung CCDC41.k 330 to 1092 781 to 19 S6X tiling clone, AAA   763/770
(99 %)
4 diff
(99.5 %id)
BM719639 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid CCDC41.j-u 3471 to 3789 1 to 320   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 320/320
(100 %)
1 diff
(99.7 %id)
BM719639 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid CCDC41.j-u 3471 to 3789 1 to 320   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 320/320
(100 %)
1 diff
(99.7 %id)
BQ185790 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid CCDC41.j-u 3471 to 3789 1 to 320   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 320/320
(100 %)
1 diff
(99.7 %id)
BQ185790 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid CCDC41.j-u 3471 to 3789 1 to 320   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 320/320
(100 %)
1 diff
(99.7 %id)
CA448017 Chondrosarcoma, Left Pelvis CCDC41.k 573 to 1092 539 to 19   AAA   521/521
(100 %)
16 diff
(97.0 %id)
CA448017 Chondrosarcoma, Left Pelvis CCDC41.k 573 to 1092 539 to 19   AAA   521/521
(100 %)
16 diff
(97.0 %id)
CA424794 cell lines, Chondrosarcoma CCDC41.g 1 to 704 722 to 19 N18T tiling clone, AAA   704/704
(100 %)
1 diff
(99.9 %id)
CA424794 cell lines, Chondrosarcoma CCDC41.g 1 to 704 722 to 19 N18T tiling clone, AAA   704/704
(100 %)
1 diff
(99.9 %id)
BU616924 Cell Line, Chondrosarcoma CCDC41.k 498 to 1092 613 to 19   AAA   595/595
(100 %)
0 diff
(100 %id)
BU616924 Cell Line, Chondrosarcoma CCDC41.k 498 to 1092 613 to 19   AAA   595/595
(100 %)
0 diff
(100 %id)
TI_151763931   CCDC41.j-u 3471 to 3813 407 to 64   tiling clone,   344/1045
(32 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m-u, .n, .o-u, .p-u, .q, .r, .s, .t, .u-u, .va Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C