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Gene NKX2-3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
31 supporting clones for gene NKX2-3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK300856 small intestine .a 20 to 2065 1 to 2047 exact tiling clone,   2047/2047
(100 %)
4 diff
(99.9 %id)
DA431150 colon .a 1 to 566 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
CR749106 pooled pancreas and spleen .a -8 to 492 1 to 501       501/501
(100 %)
0 diff
(100 %id)
BP421212 small intestine .a 57 to 551 1 to 496     Submitted on the opposite strand 496/496
(100 %)
4 diff
(99.2 %id)
AW074707 colon, juvenile granulosa tumor .a 1671 to 2071 404 to 1   tiling clone,   404/404
(100 %)
3 diff
(99.3 %id)
BI765919 pooled colon, kidney, stomach .a 529 to 814 580 to 862       834/873
(95 %)
16 diff
(98.2 %id)
BI764885 pooled colon, kidney, stomach .a 529 to 786 557 to 825       825/825
(100 %)
18 diff
(97.9 %id)
BI833798 pooled pancreas and spleen .a 28 to 773 1 to 746       746/746
(100 %)
4 diff
(99.5 %id)
BI837145 pooled pancreas and spleen .a 1 to 828 9 to 839   tiling clone,   839/840
(99 %)
9 diff
(99.0 %id)
TI_57149674   .a 529 to 814 580 to 862       834/873
(95 %)
16 diff
(98.2 %id)
TI_57149749   .a 529 to 786 587 to 855       825/855
(96 %)
22 diff
(97.5 %id)
TI_57166889   .a 28 to 773 39 to 784       746/784
(95 %)
11 diff
(98.6 %id)
TI_57167824   .a 1 to 828 37 to 867       838/868
(96 %)
14 diff
(98.4 %id)
NM_145285.2   .a 529 to 2065 558 to 2094 exact RefSeq, AAA   2094/2094
(100 %)
0 diff
(100 %id)
TI_1948071280   .a 171 to 584 129 to 543       415/1119
(37 %)
13 diff
(98.9 %id)
TI_1948071281   .a 171 to 813 124 to 769       646/1367
(47 %)
16 diff
(98.9 %id)
DA918471 small intestine .a 21 to 587 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB331812 small intestine .a 1525 to 2065 542 to 1       542/542
(100 %)
2 diff
(99.7 %id)
DA920321 small intestine .a 529 to 559 546 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA920422 small intestine .a 20 to 551 2 to 535   capped   534/534
(100 %)
3 diff
(99.5 %id)
DA920909 small intestine .a 21 to 571 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA921722 small intestine .b 529 to 546 549 to 566 exact tiling clone, capped   565/565
(100 %)
1 diff
(99.9 %id)
DA924137 small intestine .a 529 to 549 549 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA924372 small intestine .a 529 to 549 550 to 570   capped   569/570
(99 %)
3 diff
(99.5 %id)
DA928511 small intestine .a 210 to 783 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA930736 small intestine .a 24 to 533 2 to 511   capped   510/512
(99 %)
7 diff
(98.7 %id)
DA935495 Spleen .a 529 to 570 549 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
DA954395 Spleen .a 529 to 540 549 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DR007079 Spleen .a 166 to 735 29 to 597       569/597
(95 %)
6 diff
(99.0 %id)
AK313485 colon .a 166 to 735 29 to 597     Suspected internal deletion, this clone was ignored 569/597
(95 %)
6 diff
(99.0 %id)
BC025788 Pancreas, Spleen, adult pooled Gene NKX2-3, variant not shown       available from MGC, AAA Suspected internal deletion, this clone was ignored    
DA930828 small intestine Gene NKX2-3, variant not shown       capped      
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI