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Gene NEUROD6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
111 supporting clones for gene NEUROD6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
C15434   .b 207 to 449 27 to 267       241/268
(89 %)
7 diff
(97.4 %id)
U69205 whole brain .b 624 to 2154 1 to 1530   AAA   1530/1530
(100 %)
6 diff
(99.7 %id)
AF063609 brain .b 198 to 1541 1 to 1346 L300P G301W Q302A A304C M305H ...     1346/1346
(100 %)
5 diff
(99.7 %id)
AF136169   .b 233 to 2154 1 to 1921 L183F AAA   1921/1921
(100 %)
3 diff
(99.9 %id)
AF248954   .b 1 to 2154 1 to 2154 exact tiling clone, AAA   2154/2154
(100 %)
0 diff
(100 %id)
AK055224 brain .a-u 1 to 2869 3 to 2871 N71D tiling clone, available from FLJ,   2871/2871
(100 %)
6 diff
(99.8 %id)
AK055238 brain .b 31 to 2161 1 to 2131 exact available from FLJ,   2131/2131
(100 %)
0 diff
(100 %id)
AK289619 amygdala .b 200 to 1394 1 to 1195 exact     1195/1195
(100 %)
1 diff
(100.0 %id)
AK299619 brain .b 199 to 1303 1 to 1105       1105/2035
(54 %)
5 diff
(99.8 %id)
BP202737 amygdala .b 206 to 787 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CB155186 brain .b 677 to 1234 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
BC035048 Brain, hippocampus .b 199 to 2154 1 to 1956 L189M available from MGC, AAA   1956/1956
(100 %)
3 diff
(99.9 %id)
BF935475 nervous_tumor .b 773 to 1125 355 to 2     Submitted on the opposite strand 354/355
(99 %)
0 diff
(100 %id)
DA076607 cerebellum .b 136 to 715 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA133506 alzheimer cortex .b 259 to 798 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DA136858 alzheimer cortex .b 191 to 715 2 to 526   capped   525/525
(100 %)
1 diff
(99.9 %id)
DA144502 amygdala .b 197 to 770 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA148771 amygdala .b 201 to 764 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA183710 amygdala .a-u 1 to 489 9 to 499   capped   498/506
(98 %)
8 diff
(98.5 %id)
DA264837 caudate nucleus .b 259 to 830 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA296573 hippocampus .b 32 to 592 2 to 561   capped   560/560
(100 %)
4 diff
(99.3 %id)
DA369031 subthalamic nucleus .b 202 to 765 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
CR624239 fetal brain .b 223 to 1581 1 to 1359 exact     1359/1359
(100 %)
0 diff
(100 %id)
BX418971 brain, fetal brain .b 223 to 1182 1 to 943       943/943
(100 %)
46 diff
(95.2 %id)
BX463855 brain, fetal brain .b 1113 to 1581 456 to 1       456/456
(100 %)
18 diff
(96.1 %id)
BX419494 brain, fetal brain .b 217 to 1187 1 to 968       968/973
(99 %)
5 diff
(99.5 %id)
BX413652 brain, fetal brain .b 1289 to 2158 875 to 1       875/926
(94 %)
47 diff
(95.0 %id)
BX453565 brain, fetal brain .b 501 to 1369 872 to 1       872/872
(100 %)
22 diff
(97.5 %id)
BX461613 brain, fetal brain .b 1531 to 2096 608 to 41   AAA   913/983
(92 %)
28 diff
(97.2 %id)
BX420750 brain, fetal brain .b 223 to 1205 1 to 972       972/997
(97 %)
13 diff
(98.7 %id)
CV024842 mixed .b 354 to 999 1 to 646       646/646
(100 %)
1 diff
(99.9 %id)
BX478059   .b 198 to 908 1 to 711       711/711
(100 %)
2 diff
(99.8 %id)
BX951578   .b 229 to 750 1 to 522       522/522
(100 %)
1 diff
(99.9 %id)
BP229441 brain .b 157 to 740 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BP230998 brain .b 254 to 837 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DA483479 brain .a-u 1 to 473 3 to 475   capped   474/499
(94 %)
1 diff
(99.8 %id)
DB315033 brain .a-u 2331 to 2877 547 to 1       547/547
(100 %)
0 diff
(100 %id)
DA483602 brain .b 200 to 902 2 to 703   capped   702/709
(99 %)
10 diff
(98.6 %id)
DA483643 brain .b 197 to 725 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA483664 brain .b 32 to 521 2 to 492   capped   491/493
(99 %)
2 diff
(99.6 %id)
DB315050 brain .b 1602 to 2161 563 to 1       563/563
(100 %)
4 diff
(99.3 %id)
DA484151 brain .b 200 to 712 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
DA484186 brain .b 200 to 735 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
DA484940 brain .a-u 1 to 564 3 to 569   tiling clone, capped   568/568
(100 %)
3 diff
(99.5 %id)
DA484984 brain .b 194 to 755 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA485510 brain .b 194 to 777 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA486063 brain .b 200 to 759 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA486166 brain .b 214 to 785 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA486219 brain .b 200 to 759 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA486232 brain .b 255 to 818 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA486268 brain .b 197 to 763 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA487201 brain .b 235 to 817 2 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
DA487338 brain .b 204 to 784 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA487507 brain .b 235 to 785 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA487599 brain .b 256 to 806 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA487609 brain .b 194 to 762 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA487890 brain .b 231 to 802 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA488552 brain .b 202 to 773 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA488667 brain .b 200 to 683 2 to 485   capped   484/484
(100 %)
1 diff
(99.8 %id)
DA488794 brain .b 231 to 738 2 to 509   capped   508/508
(100 %)
0 diff
(100 %id)
DA489036 brain .b 231 to 790 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA511758 brain .b 194 to 742 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA511832 brain .b 241 to 800 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA511872 brain .b 200 to 760 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA512168 brain .b 235 to 781 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA512369 brain .b 194 to 746 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA515846 brain .b 259 to 817 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA522903 brain .b 200 to 759 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
D80122 brain .b 1331 to 1695 364 to 1       364/364
(100 %)
3 diff
(99.2 %id)
D80123 brain .b 233 to 600 1 to 369       369/370
(99 %)
2 diff
(99.5 %id)
D81215 brain .b 233 to 654 1 to 420       420/420
(100 %)
2 diff
(99.6 %id)
D81298 brain .b 1895 to 2154 261 to 1     Submitted on the opposite strand 261/261
(100 %)
6 diff
(97.8 %id)
D81858 brain .b 321 to 521 1 to 202       202/204
(99 %)
10 diff
(95.1 %id)
DB463056 hippocampus .b 138 to 457 1 to 320       320/320
(100 %)
4 diff
(98.8 %id)
DB528792 hippocampus .b 1087 to 1543 1 to 457     Submitted on the opposite strand 457/457
(100 %)
6 diff
(98.7 %id)
DB465305 hippocampus .b 207 to 636 1 to 430       430/430
(100 %)
0 diff
(100 %id)
DB531869 hippocampus .b 1729 to 2159 1 to 431     Submitted on the opposite strand 431/431
(100 %)
0 diff
(100 %id)
DB474700 hippocampus .b 244 to 758 1 to 515       515/515
(100 %)
0 diff
(100 %id)
DB543531 hippocampus .b 1949 to 2153 24 to 228     Submitted on the opposite strand 205/228
(89 %)
6 diff
(97.4 %id)
DB483744 hippocampus .b 183 to 644 1 to 461       461/461
(100 %)
2 diff
(99.6 %id)
DB552699 hippocampus .b 1685 to 2154 1 to 470     Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
DB483769 hippocampus .b 154 to 617 1 to 464       464/465
(99 %)
2 diff
(99.6 %id)
DB552729 hippocampus .b 1231 to 1704 1 to 474     Submitted on the opposite strand 474/476
(99 %)
1 diff
(99.8 %id)
DB485830 hypothalamus .b 201 to 605 1 to 399       399/436
(91 %)
7 diff
(98.4 %id)
M78507   .b 881 to 1167 1 to 288       288/288
(100 %)
2 diff
(99.4 %id)
T23557   .b 1816 to 2157 343 to 1       343/345
(99 %)
6 diff
(98.3 %id)
H08028 whole brain .b 628 to 1132 1 to 519       519/520
(99 %)
30 diff
(94.3 %id)
H15976 whole brain .b 628 to 1028 1 to 407       407/409
(99 %)
14 diff
(96.6 %id)
H18504 brain .b 1904 to 2154 251 to 1       251/251
(100 %)
0 diff
(100 %id)
H19169 brain .b 682 to 1106 1 to 433       433/435
(99 %)
15 diff
(96.6 %id)
AW236965 pooled germ cell tumors .b 1101 to 1706 609 to 4       606/609
(99 %)
0 diff
(100 %id)
AW163081 brain, frontal lobe .b 1679 to 2157 485 to 7       479/485
(98 %)
0 diff
(100 %id)
AW163683 brain, frontal lobe .b 241 to 914 1 to 675       675/675
(100 %)
26 diff
(96.2 %id)
BF057225 pooled germ cell tumors .b 1008 to 1706 706 to 7       700/706
(99 %)
0 diff
(100 %id)
BG699059 brain, hippocampus .b 246 to 933 1 to 688       688/688
(100 %)
5 diff
(99.3 %id)
BC022560 Brain, hippocampus .b 207 to 2159 1 to 1952 C166S G168V L169F S170P Q171S ... available from MGC, AAA   1952/1952
(100 %)
1 diff
(100.0 %id)
BG705179 brain, hippocampus .b 202 to 986 1 to 788   available from MGC,   788/807
(97 %)
27 diff
(96.7 %id)
BG703083 brain, hippocampus .b 194 to 768 1 to 579       579/579
(100 %)
8 diff
(98.7 %id)
BG720415 testis .b 202 to 522 1 to 335       335/335
(100 %)
19 diff
(94.4 %id)
BI912971 brain .b 1197 to 1543 1 to 346   AAA   346/346
(100 %)
3 diff
(99.2 %id)
BI918896 brain .b 1040 to 1650 7 to 621       615/765
(80 %)
16 diff
(98.0 %id)
BI547130 brain, hippocampus .b 194 to 1098 1 to 907       907/946
(95 %)
45 diff
(95.3 %id)
TI_57238445   .b 1188 to 1543 21 to 375   AAA   355/375
(94 %)
8 diff
(97.9 %id)
TI_57241955   .b 1040 to 1650 7 to 621       615/765
(80 %)
16 diff
(98.0 %id)
TI_44167811   .b 199 to 1098 89 to 990       902/1029
(87 %)
47 diff
(95.5 %id)
CD580508 brain .b 409 to 1309 1 to 901       901/902
(99 %)
5 diff
(99.5 %id)
NM_022728.2   .b 1 to 2154 1 to 2154 exact RefSeq, AAA   2154/2154
(100 %)
0 diff
(100 %id)
BP308314 brain .b 193 to 773 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP308720 brain .b 201 to 769 1 to 569       569/592
(96 %)
6 diff
(99.0 %id)
BP308920 brain .b 213 to 794 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP309685 brain .b 259 to 842 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
DA775728 brain .b 231 to 797 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DC375302 brain .b 199 to 692 1 to 494       494/494
(100 %)
1 diff
(99.8 %id)
DA791062 brain .b 200 to 768 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA803983 brain .a-u 7 to 548 2 to 543   capped   542/544
(99 %)
1 diff
(99.9 %id)
DN990194 brain, whole brain .b 238 to 965 1 to 727       727/727
(100 %)
5 diff
(99.4 %id)
TI_57241955   .b 1040 to 1650 7 to 621       615/765
(80 %)
16 diff
(98.0 %id)
TI_44167811   .b 199 to 1098 89 to 990       902/1029
(87 %)
47 diff
(95.5 %id)
CD580508 MPMGp800O06583 NEUROD6.bAug10 1309 901 MPMGp800O06583     901 5
NM_022728.2 NM_022728 NEUROD6.bAug10 2154 2154 NM_022728     2154 0
BP308314 NRB04717 NEUROD6.bAug10 773 581 NRB04717     581 0
BP308720 NRB06127 NEUROD6.bAug10 769 569 NRB06127     569 6
BP308920 NRB06862 NEUROD6.bAug10 794 582 NRB06862     582 2
BP309685 NRR00232 NEUROD6.bAug10 842 583 NRR00232     583 3
DA775728 OCBBF2009700 NEUROD6.bAug10 797 569 OCBBF2009700     568 1
DC375302 OCBBF2018170 NEUROD6.bAug10 692 494 OCBBF2018170     494 1
DA791062 OCBBF2029984 NEUROD6.bAug10 768 570 OCBBF2029984     569 1
DA803983 OCBBF3008934 NEUROD6.aAug10-unspliced 548 543 OCBBF3008934     542 1
DN990194 TC112469 NEUROD6.bAug10 965 727 TC112469     727 5
DN990194 TC112469 NEUROD6.bAug10 965 727 TC112469     727 5
? Gene Summary Gene on genome mRNA:.a-u, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI