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Gene NCAM1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
599 supporting clones for gene NCAM1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_000615.5   NCAM1.a 1 to 5932 1 to 5935 T105N S106I L107P A109S S110Q ... RefSeq, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 5933/5935
(99 %)
5 diff
(100.0 %id)
S71824   NCAM1.a 164 to 2986 25 to 2850   tiling clone,   2824/2960
(95 %)
9 diff
(99.7 %id)
U63041   NCAM1.a 304 to 2933 1 to 2633       2631/2633
(99 %)
12 diff
(99.6 %id)
BQ893857 brain, neuroblastoma, cell line NCAM1.a 591 to 1515 1 to 931       931/935
(99 %)
21 diff
(97.8 %id)
AU117395 whole embryo, mainly head NCAM1.a 701 to 1515 2 to 816   capped   815/815
(100 %)
8 diff
(99.1 %id)
DA305476 hippocampus NCAM1.a 886 to 1449 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA809628 brain NCAM1.a 903 to 1447 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA498296 brain NCAM1.a 944 to 1512 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BM916998 blood, natural killer cells, cell line NCAM1.a 947 to 2002 1 to 1065       1065/1080
(98 %)
38 diff
(96.5 %id)
DA240471 brain NCAM1.a 959 to 1540 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DA756034   NCAM1.a 1056 to 1635 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA802114 brain NCAM1.a 1118 to 1672 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA501505 brain NCAM1.a 1182 to 1752 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA330676 hippocampus NCAM1.a 1234 to 1786 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB286479 uterus NCAM1.a 1265 to 1797 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA779112 brain NCAM1.a 1276 to 1841 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA111580 cerebellum NCAM1.a 1303 to 1891 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA096421 cerebellum NCAM1.a 1371 to 1850 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
DB355191 whole embryo, mainly head NCAM1.a 2676 to 3117 446 to 1   tiling clone,   446/446
(100 %)
13 diff
(97.1 %id)
NM_001076682.2   NCAM1.b 1 to 4893 1 to 4896 T105N S106I L107P A109S S110Q ... RefSeq, AAA   4894/4896
(99 %)
5 diff
(99.9 %id)
X16841 skeletal muscle NCAM1.b 208 to 2991 12 to 2799   tiling clone,   2786/2799
(99 %)
9 diff
(99.7 %id)
AK303232 thymus NCAM1.b 1706 to 2965 1 to 1260   tiling clone,   1260/1260
(100 %)
1 diff
(100.0 %id)
DC406921 thymus NCAM1.b 1706 to 2280 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
M17409   NCAM1.b 1811 to 2991 1 to 1184       1182/1184
(99 %)
1 diff
(100.0 %id)
EB387148 eye, optic nerve NCAM1.b 2344 to 3076 1 to 733       733/733
(100 %)
3 diff
(99.6 %id)
AV721827 hypothalamus NCAM1.b 2525 to 3207 1 to 684       684/686
(99 %)
8 diff
(98.9 %id)
DC338158 subthalamic nucleus NCAM1.b 2550 to 3109 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC357213 heart NCAM1.b 2584 to 3164 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC314863 amygdala NCAM1.b 2618 to 3192 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DA350602 substantia nigra NCAM1.b 2629 to 3218 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA345243 substantia nigra NCAM1.b 2649 to 3213 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA349230 substantia nigra NCAM1.b 2678 to 3247 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BM804748 ovary (pool of 3) NCAM1.b 2722 to 3599 1 to 896       896/997
(89 %)
26 diff
(97.4 %id)
DB173614 kidney, tumor tissue NCAM1.b 2730 to 3293 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA360156 subthalamic nucleus NCAM1.b 2776 to 3306 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA287858 corpus callosum NCAM1.b 2862 to 3426 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA363643 subthalamic nucleus NCAM1.b 2877 to 3426 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA296963 hippocampus NCAM1.b 2881 to 3447 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA260993 caudate nucleus NCAM1.b 2889 to 3452 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA137183 alzheimer cortex NCAM1.b 2890 to 3430 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB181018 kidney, tumor tissue NCAM1.b 2890 to 3458 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB171989 kidney, tumor tissue NCAM1.b 2900 to 3474 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA260617 caudate nucleus NCAM1.b 2921 to 3488 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
AK054929 cerebellum NCAM1.b 2958 to 4892 1 to 1935   tiling clone, available from FLJ,   1935/1935
(100 %)
2 diff
(99.9 %id)
DA059712 cerebellum NCAM1.b 2959 to 3537 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA561989 heart NCAM1.b 2993 to 3563 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BU150634 dorsal root ganglia NCAM1.b 3073 to 3765 5 to 700       696/924
(75 %)
15 diff
(98.4 %id)
DA136179 alzheimer cortex NCAM1.b 3084 to 3718 2 to 636   capped   635/635
(100 %)
0 diff
(100 %id)
BF836033 head_neck NCAM1.b 3094 to 3540 453 to 8     Submitted on the opposite strand 446/471
(94 %)
0 diff
(100 %id)
BF838289 head_neck NCAM1.b 3094 to 3540 453 to 8     Submitted on the opposite strand 446/471
(94 %)
0 diff
(100 %id)
DA072167 cerebellum NCAM1.b 3119 to 3694 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
TI_57220467   NCAM1.b 3346 to 4340 20 to 1005       986/1020
(96 %)
62 diff
(94.0 %id)
CD673026 eye, Iris NCAM1.b 3422 to 4048 1 to 627   tiling clone,   627/627
(100 %)
0 diff
(100 %id)
BM784425 stomach NCAM1.b 3578 to 3847 1 to 270       270/283
(95 %)
1 diff
(99.7 %id)
AW016503   NCAM1.b 3580 to 3849 287 to 18   AAA   270/270
(100 %)
0 diff
(100 %id)
EB385895 eye, optic nerve NCAM1.b 3634 to 4445 1 to 812       812/812
(100 %)
2 diff
(99.8 %id)
BC019845 Brain, glioblastoma with EGFR amplification NCAM1.b 3934 to 4893 1 to 960   available from MGC, AAA   960/960
(100 %)
1 diff
(99.9 %id)
BF339874 brain, glioblastoma with EGFR amplification NCAM1.b 3935 to 4672 1 to 727   available from MGC,   727/926
(78 %)
16 diff
(98.3 %id)
DB296896 cerebellum NCAM1.b 4353 to 4893 541 to 1       541/552
(98 %)
0 diff
(100 %id)
BM686685 eye, optic nerve NCAM1.b 4391 to 4893 1 to 502   AAA   502/502
(100 %)
1 diff
(99.9 %id)
AW007527 anaplastic oligodendroglioma, brain NCAM1.b 4401 to 4893 493 to 1       493/493
(100 %)
0 diff
(100 %id)
AI075858   NCAM1.b 4462 to 4895 441 to 8   tiling clone,   434/441
(98 %)
0 diff
(100 %id)
R58905   NCAM1.b 4512 to 4887 376 to 1       376/376
(100 %)
0 diff
(100 %id)
BF530497 anaplastic oligodendroglioma with 1p/19qloss, brain NCAM1.b 4555 to 4888 1 to 334   AAA   334/334
(100 %)
0 diff
(100 %id)
AA814497 brain, substantia nigra NCAM1.b 4564 to 4893 360 to 31   AAA   330/330
(100 %)
0 diff
(100 %id)
AB209443 brain NCAM1.c 1 to 4693 1 to 4696 T73N S74I L75P A77S S78Q ... tiling clone,   4694/4696
(99 %)
5 diff
(99.9 %id)
DA202713 brain NCAM1.c 1951 to 2510 2 to 561   tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
DA315656 hippocampus NCAM1.d 1 to 452 2 to 454   tiling clone, capped   453/545
(83 %)
6 diff
(98.9 %id)
DA498799 brain NCAM1.d 19 to 452 2 to 435   capped   434/548
(79 %)
7 diff
(98.8 %id)
DA803288 brain NCAM1.d 20 to 452 2 to 435   capped   434/552
(78 %)
6 diff
(99.0 %id)
DA743486   NCAM1.d 25 to 591 2 to 569   capped   568/568
(100 %)
8 diff
(98.6 %id)
DA505202 brain NCAM1.d 39 to 590 2 to 553   capped   552/552
(100 %)
5 diff
(99.1 %id)
DA797182 brain NCAM1.d 59 to 626 2 to 570   capped   569/569
(100 %)
5 diff
(99.2 %id)
DA792768 brain NCAM1.d 60 to 611 2 to 553   capped   552/552
(100 %)
9 diff
(98.4 %id)
DA336329 hippocampus NCAM1.d 61 to 642 2 to 583   capped   582/582
(100 %)
4 diff
(99.4 %id)
AK314589 testis NCAM1.d 63 to 3052 1 to 2993 D141N V195A R517Q E518G P519E ... tiling clone,   2991/2993
(99 %)
8 diff
(99.8 %id)
BP230620 brain NCAM1.d 63 to 642 1 to 581       581/581
(100 %)
8 diff
(98.7 %id)
BP311189 brain NCAM1.d 63 to 651 1 to 589       589/589
(100 %)
6 diff
(99.0 %id)
DA105302 cerebellum NCAM1.d 64 to 643 2 to 581   capped   580/580
(100 %)
6 diff
(99.0 %id)
DA221804 brain NCAM1.d 64 to 623 2 to 561   capped   560/560
(100 %)
4 diff
(99.3 %id)
DA332852 hippocampus NCAM1.d 64 to 635 2 to 573   capped   572/572
(100 %)
4 diff
(99.4 %id)
DA412216 thalamus NCAM1.d 64 to 629 2 to 568   capped   567/567
(100 %)
5 diff
(99.2 %id)
DA500105 brain NCAM1.d 64 to 632 2 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
DA515205 brain NCAM1.d 64 to 613 2 to 551   capped   550/550
(100 %)
5 diff
(99.1 %id)
DA784141 brain NCAM1.d 64 to 646 2 to 584   capped   583/583
(100 %)
5 diff
(99.2 %id)
DA784182 brain NCAM1.d 64 to 640 2 to 578   capped   577/577
(100 %)
6 diff
(99.0 %id)
DA799414 brain NCAM1.d 64 to 604 2 to 541   capped   540/540
(100 %)
5 diff
(99.1 %id)
DA810536 brain NCAM1.d 64 to 598 2 to 536   capped   535/535
(100 %)
4 diff
(99.3 %id)
DB086943 testis NCAM1.d 64 to 615 2 to 553   capped   552/552
(100 %)
4 diff
(99.3 %id)
DA769932 brain NCAM1.d 65 to 637 2 to 575   capped   574/574
(100 %)
6 diff
(99.0 %id)
DA786470 brain NCAM1.d 65 to 650 2 to 587   capped   586/586
(100 %)
5 diff
(99.2 %id)
DA797124 brain NCAM1.d 65 to 629 2 to 566   capped   565/565
(100 %)
5 diff
(99.2 %id)
DA099021 cerebellum NCAM1.d 66 to 614 2 to 550   capped   549/549
(100 %)
4 diff
(99.3 %id)
DA507920 brain NCAM1.d 66 to 632 2 to 568   capped   567/567
(100 %)
5 diff
(99.2 %id)
DA801254 brain NCAM1.d 66 to 617 2 to 553   capped   552/552
(100 %)
4 diff
(99.3 %id)
DA805689 brain NCAM1.d 66 to 594 2 to 530   capped   529/529
(100 %)
6 diff
(98.9 %id)
BP349615 brain NCAM1.d 66 to 647 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
DA194734 amygdala NCAM1.d 67 to 611 2 to 546   capped   545/545
(100 %)
4 diff
(99.3 %id)
DA213581 brain NCAM1.d 67 to 597 2 to 532   capped   531/531
(100 %)
4 diff
(99.3 %id)
DA288942 hippocampus NCAM1.d 67 to 597 2 to 532   capped   531/531
(100 %)
4 diff
(99.3 %id)
DA325846 hippocampus NCAM1.d 67 to 629 2 to 564   capped   563/563
(100 %)
4 diff
(99.3 %id)
DA331289 hippocampus NCAM1.d 67 to 645 2 to 580   capped   579/579
(100 %)
5 diff
(99.2 %id)
DA411549 thalamus NCAM1.d 67 to 619 2 to 555   capped   554/554
(100 %)
5 diff
(99.1 %id)
DA505235 brain NCAM1.d 67 to 635 2 to 571   capped   570/570
(100 %)
5 diff
(99.2 %id)
DA769427 brain NCAM1.d 67 to 632 2 to 567   capped   566/566
(100 %)
4 diff
(99.3 %id)
DA771568 brain NCAM1.d 67 to 653 2 to 588   capped   587/587
(100 %)
5 diff
(99.2 %id)
DA780300 brain NCAM1.d 67 to 640 2 to 576   capped   575/575
(100 %)
5 diff
(99.2 %id)
DA787406 brain NCAM1.d 67 to 635 2 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
DA797851 brain NCAM1.d 67 to 606 2 to 541   capped   540/540
(100 %)
4 diff
(99.3 %id)
NM_181351.3   NCAM1.e 1 to 5962 1 to 5965 R491Q E492G P493E S494P A495S ... RefSeq, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 5963/5965
(99 %)
5 diff
(100.0 %id)
DA337649 hippocampus NCAM1.e 2 to 598 2 to 598   tiling clone, capped   597/597
(100 %)
4 diff
(99.4 %id)
DA394543 thalamus NCAM1.e 3 to 598 2 to 597   capped   596/596
(100 %)
7 diff
(98.9 %id)
DA240884 brain NCAM1.e 4 to 596 2 to 594   capped   593/593
(100 %)
5 diff
(99.2 %id)
DA530379 brain NCAM1.e 4 to 600 2 to 598   capped   597/597
(100 %)
5 diff
(99.2 %id)
DA792685 brain NCAM1.e 6 to 629 2 to 625   capped   624/624
(100 %)
6 diff
(99.1 %id)
DA248448 brain NCAM1.e 7 to 599 2 to 594   capped   593/593
(100 %)
4 diff
(99.4 %id)
DA769933 brain NCAM1.e 33 to 617 2 to 586   capped   585/585
(100 %)
4 diff
(99.4 %id)
DA100163 cerebellum NCAM1.e 67 to 609 2 to 545   capped   544/544
(100 %)
5 diff
(99.1 %id)
BP202390 amygdala NCAM1.e 72 to 656 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
DA217739 brain NCAM1.e 73 to 621 2 to 550   capped   549/549
(100 %)
4 diff
(99.3 %id)
DA249812 brain NCAM1.e 73 to 652 2 to 581   capped   580/580
(100 %)
4 diff
(99.4 %id)
DA809140 brain NCAM1.e 73 to 618 2 to 547   capped   546/546
(100 %)
4 diff
(99.3 %id)
DA768430 brain NCAM1.e 84 to 600 2 to 518   capped   517/517
(100 %)
4 diff
(99.3 %id)
DA494183 brain NCAM1.e 85 to 658 2 to 575   capped   574/574
(100 %)
8 diff
(98.7 %id)
DA791539 brain NCAM1.e 85 to 668 2 to 585   capped   584/584
(100 %)
5 diff
(99.2 %id)
DA102615 cerebellum NCAM1.e 86 to 676 2 to 593   capped   592/592
(100 %)
6 diff
(99.0 %id)
DA497763 brain NCAM1.e 95 to 658 2 to 565   capped   564/564
(100 %)
4 diff
(99.3 %id)
DA495283 brain NCAM1.e 103 to 683 2 to 582   capped   581/581
(100 %)
5 diff
(99.2 %id)
DA390240 thalamus NCAM1.e 108 to 697 2 to 591   capped   590/590
(100 %)
4 diff
(99.4 %id)
DA779476 brain NCAM1.e 118 to 696 2 to 580   capped   579/579
(100 %)
4 diff
(99.4 %id)
AF005070   NCAM1.e 130 to 1386 1 to 1258   tiling clone,   1258/1258
(100 %)
32 diff
(97.5 %id)
DA789741 brain NCAM1.e 143 to 724 2 to 583   capped   582/582
(100 %)
5 diff
(99.2 %id)
AU118484 whole embryo, mainly head NCAM1.e 144 to 830 2 to 688   capped   687/712
(96 %)
11 diff
(98.5 %id)
DA335018 hippocampus NCAM1.e 146 to 731 2 to 587   capped   586/586
(100 %)
4 diff
(99.4 %id)
DA798207 brain NCAM1.e 147 to 722 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
DA333530 hippocampus NCAM1.e 148 to 728 2 to 582   capped   581/581
(100 %)
4 diff
(99.4 %id)
BP208118 cerebellum NCAM1.e 148 to 726 1 to 579       579/579
(100 %)
5 diff
(99.2 %id)
BP217714 caudate nucleus NCAM1.e 148 to 729 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP229643 brain NCAM1.e 148 to 729 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DB479296 hippocampus NCAM1.e 148 to 606 1 to 459       459/459
(100 %)
15 diff
(96.8 %id)
BP251007 hippocampus NCAM1.e 148 to 730 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
CB131819 Liver NCAM1.e 148 to 820 1 to 673       673/673
(100 %)
4 diff
(99.5 %id)
DA101511 cerebellum NCAM1.e 149 to 733 2 to 587   capped   586/586
(100 %)
5 diff
(99.2 %id)
DA101727 cerebellum NCAM1.e 149 to 679 2 to 532   tiling clone, capped   531/531
(100 %)
4 diff
(99.3 %id)
DA189887 amygdala NCAM1.e 149 to 749 2 to 602   capped   601/601
(100 %)
5 diff
(99.2 %id)
DA194051 amygdala NCAM1.e 149 to 737 2 to 590   capped   589/589
(100 %)
4 diff
(99.4 %id)
DA218611 brain NCAM1.e 149 to 816 2 to 668   capped   667/667
(100 %)
6 diff
(99.2 %id)
DA222357 brain NCAM1.e 149 to 728 2 to 581   capped   580/580
(100 %)
4 diff
(99.4 %id)
DA224335 brain NCAM1.e 149 to 803 2 to 656   capped   655/655
(100 %)
5 diff
(99.3 %id)
DA224887 brain NCAM1.e 149 to 729 2 to 582   capped   581/581
(100 %)
5 diff
(99.2 %id)
DA233803 brain NCAM1.e 149 to 725 2 to 578   capped   577/577
(100 %)
4 diff
(99.4 %id)
DA238740 brain NCAM1.e 149 to 740 2 to 593   capped   592/592
(100 %)
5 diff
(99.2 %id)
DA238997 brain NCAM1.e 149 to 741 2 to 594   capped   593/593
(100 %)
4 diff
(99.4 %id)
DA240603 brain NCAM1.e 149 to 740 2 to 593   capped   592/592
(100 %)
5 diff
(99.2 %id)
DA242262 brain NCAM1.e 149 to 751 2 to 604   capped   603/603
(100 %)
5 diff
(99.2 %id)
DA243730 brain NCAM1.e 149 to 727 2 to 580   capped   579/579
(100 %)
5 diff
(99.2 %id)
DA245226 brain NCAM1.e 149 to 734 2 to 587   capped   586/586
(100 %)
5 diff
(99.2 %id)
DA248002 brain NCAM1.e 149 to 744 2 to 597   capped   596/596
(100 %)
5 diff
(99.2 %id)
DA249894 brain NCAM1.e 149 to 729 2 to 582   capped   581/581
(100 %)
5 diff
(99.2 %id)
DA290068 hippocampus NCAM1.e 149 to 737 2 to 590   capped   589/589
(100 %)
4 diff
(99.4 %id)
DA311623 hippocampus NCAM1.e 149 to 726 2 to 579   capped   578/578
(100 %)
4 diff
(99.4 %id)
DA331779 hippocampus NCAM1.e 149 to 743 2 to 596   capped   595/595
(100 %)
5 diff
(99.2 %id)
DA332530 hippocampus NCAM1.e 149 to 725 2 to 578   capped   577/577
(100 %)
4 diff
(99.4 %id)
DA334244 hippocampus NCAM1.e 149 to 730 2 to 583   capped   582/582
(100 %)
5 diff
(99.2 %id)
DA334389 hippocampus NCAM1.e 149 to 724 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
DA334533 hippocampus NCAM1.e 149 to 741 2 to 594   capped   593/593
(100 %)
4 diff
(99.4 %id)
DA336227 hippocampus NCAM1.e 149 to 725 2 to 577   capped   576/576
(100 %)
5 diff
(99.2 %id)
DA339338 hippocampus NCAM1.e 149 to 737 2 to 590   capped   589/591
(99 %)
5 diff
(99.2 %id)
DA340063 hippocampus NCAM1.e 149 to 745 2 to 598   capped   597/597
(100 %)
4 diff
(99.4 %id)
DA353893 substantia nigra NCAM1.e 149 to 723 2 to 577   capped   576/576
(100 %)
5 diff
(99.2 %id)
DA395272 thalamus NCAM1.e 149 to 730 2 to 583   capped   582/582
(100 %)
4 diff
(99.4 %id)
DA397702 thalamus NCAM1.e 149 to 747 2 to 599   capped   598/598
(100 %)
5 diff
(99.2 %id)
DA405921 thalamus NCAM1.e 149 to 774 2 to 627   capped   626/626
(100 %)
4 diff
(99.4 %id)
DA408802 thalamus NCAM1.e 149 to 808 2 to 662   capped   661/661
(100 %)
6 diff
(99.1 %id)
DA410693 thalamus NCAM1.e 149 to 770 2 to 623   capped   622/622
(100 %)
4 diff
(99.4 %id)
DA415317 thalamus NCAM1.e 149 to 786 2 to 639   capped   638/638
(100 %)
4 diff
(99.4 %id)
DA483070 brain NCAM1.e 149 to 864 2 to 719   capped   718/724
(99 %)
9 diff
(98.8 %id)
DA493759 brain NCAM1.e 149 to 724 2 to 577   capped   576/576
(100 %)
5 diff
(99.2 %id)
DA510525 brain NCAM1.e 149 to 729 2 to 582   capped   581/581
(100 %)
4 diff
(99.4 %id)
DA528360 brain NCAM1.e 149 to 768 2 to 621   capped   620/620
(100 %)
5 diff
(99.2 %id)
AU117490 whole embryo, mainly head NCAM1.e 149 to 955 2 to 809   capped   808/808
(100 %)
11 diff
(98.7 %id)
DA770677 brain NCAM1.e 149 to 731 2 to 584   capped   583/583
(100 %)
4 diff
(99.4 %id)
DA777770 brain NCAM1.e 149 to 727 2 to 580   capped   579/579
(100 %)
4 diff
(99.4 %id)
DA780394 brain NCAM1.e 149 to 731 2 to 584   capped   583/583
(100 %)
5 diff
(99.2 %id)
DA788903 brain NCAM1.e 149 to 732 2 to 585   capped   584/584
(100 %)
4 diff
(99.4 %id)
DA794848 brain NCAM1.e 149 to 760 2 to 613   capped   612/612
(100 %)
4 diff
(99.4 %id)
DA335503 hippocampus NCAM1.e 151 to 737 2 to 588   capped   587/587
(100 %)
4 diff
(99.4 %id)
DA497310 brain NCAM1.e 151 to 738 2 to 589   capped   588/588
(100 %)
5 diff
(99.2 %id)
DA332682 hippocampus NCAM1.e 152 to 746 2 to 596   capped   595/595
(100 %)
5 diff
(99.2 %id)
DA339806 hippocampus NCAM1.e 152 to 749 2 to 600   capped   599/599
(100 %)
5 diff
(99.2 %id)
BP228887 brain NCAM1.e 152 to 734 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DA102677 cerebellum NCAM1.e 153 to 746 2 to 596   capped   595/595
(100 %)
5 diff
(99.2 %id)
DA111216 cerebellum NCAM1.e 153 to 754 2 to 604   capped   603/603
(100 %)
5 diff
(99.2 %id)
DA111573 cerebellum NCAM1.e 153 to 735 2 to 585   capped   584/584
(100 %)
5 diff
(99.2 %id)
DA116683 cerebellum NCAM1.e 153 to 743 2 to 592   capped   591/591
(100 %)
4 diff
(99.4 %id)
DA126083 cerebellum NCAM1.e 153 to 739 2 to 587   capped   586/586
(100 %)
5 diff
(99.2 %id)
DA128546 cerebellum NCAM1.e 153 to 733 2 to 582   capped   581/581
(100 %)
4 diff
(99.4 %id)
DA193324 amygdala NCAM1.e 153 to 739 2 to 589   capped   588/588
(100 %)
5 diff
(99.2 %id)
DA235218 brain NCAM1.e 153 to 737 2 to 586   capped   585/585
(100 %)
4 diff
(99.4 %id)
DA243340 brain NCAM1.e 153 to 754 2 to 603   capped   602/602
(100 %)
5 diff
(99.2 %id)
DA331519 hippocampus NCAM1.e 153 to 729 2 to 578   capped   577/577
(100 %)
4 diff
(99.4 %id)
DA332372 hippocampus NCAM1.e 153 to 741 2 to 590   capped   589/589
(100 %)
4 diff
(99.4 %id)
DA340541 hippocampus NCAM1.e 153 to 743 2 to 591   capped   590/590
(100 %)
5 diff
(99.2 %id)
DA483204 brain NCAM1.e 153 to 926 2 to 775   capped   774/774
(100 %)
7 diff
(99.1 %id)
DA483315 brain NCAM1.e 153 to 993 2 to 839   capped   838/838
(100 %)
7 diff
(99.2 %id)
DA504884 brain NCAM1.e 153 to 737 2 to 586   capped   585/585
(100 %)
4 diff
(99.4 %id)
DA773046 brain NCAM1.e 153 to 743 2 to 592   capped   591/591
(100 %)
4 diff
(99.4 %id)
DA775329 brain NCAM1.e 153 to 729 2 to 578   capped   577/577
(100 %)
4 diff
(99.4 %id)
DA791387 brain NCAM1.e 153 to 777 2 to 627   capped   626/626
(100 %)
6 diff
(99.1 %id)
DA807889 brain NCAM1.e 153 to 746 2 to 594   capped   593/593
(100 %)
5 diff
(99.2 %id)
DA809396 brain NCAM1.e 153 to 754 2 to 603   capped   602/602
(100 %)
4 diff
(99.4 %id)
TI_57218274   NCAM1.e 157 to 719 26 to 589       564/589
(95 %)
9 diff
(98.5 %id)
DA337451 hippocampus NCAM1.e 161 to 750 2 to 591   capped   590/590
(100 %)
4 diff
(99.4 %id)
DA493046 brain NCAM1.e 163 to 747 2 to 586   capped   585/585
(100 %)
4 diff
(99.4 %id)
BP249775 hippocampus NCAM1.e 163 to 750 1 to 588       588/588
(100 %)
4 diff
(99.4 %id)
BQ897741 dorsal root ganglia NCAM1.e 163 to 1022 1 to 862       862/863
(99 %)
7 diff
(99.2 %id)
BC047244 Ovary, pooled from 3 adults NCAM1.e 164 to 4125 1 to 3966 R491Q E492G P493E S494P A495S ... tiling clone, available from MGC, AAA   3964/3966
(99 %)
8 diff
(99.8 %id)
BP230089 brain NCAM1.e 164 to 745 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
CV571865 cornea, eye NCAM1.e 164 to 759 1 to 597       597/597
(100 %)
5 diff
(99.2 %id)
DR001340 fetal brain NCAM1.e 164 to 981 1 to 822       822/822
(100 %)
11 diff
(98.7 %id)
BI753503 brain NCAM1.e 165 to 719 1 to 557   available from MGC,   557/557
(100 %)
9 diff
(98.4 %id)
DA192165 amygdala NCAM1.e 172 to 754 2 to 584   capped   583/583
(100 %)
5 diff
(99.2 %id)
CN431395 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells NCAM1.e 177 to 830 1 to 652       652/653
(99 %)
11 diff
(98.4 %id)
DA491090 brain NCAM1.e 195 to 770 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
DA779599 brain NCAM1.e 195 to 772 2 to 579   capped   578/578
(100 %)
4 diff
(99.4 %id)
DA192734 amygdala NCAM1.e 196 to 792 2 to 598   capped   597/597
(100 %)
5 diff
(99.2 %id)
DA240687 brain NCAM1.e 199 to 807 2 to 610   capped   609/609
(100 %)
5 diff
(99.2 %id)
DA244458 brain NCAM1.e 202 to 791 2 to 591   capped   590/590
(100 %)
4 diff
(99.4 %id)
DA335724 hippocampus NCAM1.e 202 to 793 2 to 593   capped   592/592
(100 %)
4 diff
(99.4 %id)
DA493531 brain NCAM1.e 202 to 786 2 to 586   capped   585/585
(100 %)
5 diff
(99.2 %id)
DA529626 brain NCAM1.e 208 to 811 2 to 605   capped   604/604
(100 %)
5 diff
(99.2 %id)
DA240541 brain NCAM1.e 209 to 793 2 to 586   capped   585/585
(100 %)
5 diff
(99.2 %id)
DA390805 thalamus NCAM1.e 209 to 793 2 to 586   capped   585/585
(100 %)
4 diff
(99.4 %id)
DA398796 thalamus NCAM1.e 209 to 754 2 to 547   capped   546/546
(100 %)
6 diff
(99.0 %id)
DA506645 brain NCAM1.e 209 to 786 2 to 579   capped   578/578
(100 %)
4 diff
(99.4 %id)
DA235753 brain NCAM1.e 210 to 794 2 to 586   capped   585/585
(100 %)
4 diff
(99.4 %id)
DA782135 brain NCAM1.e 210 to 789 2 to 579   capped   578/578
(100 %)
5 diff
(99.2 %id)
DA328155 hippocampus NCAM1.e 216 to 816 2 to 600   capped   599/599
(100 %)
6 diff
(99.0 %id)
DA337554 hippocampus NCAM1.e 216 to 791 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
DA338743 hippocampus NCAM1.e 216 to 801 2 to 588   capped   587/587
(100 %)
5 diff
(99.2 %id)
DA493235 brain NCAM1.e 216 to 792 2 to 578   capped   577/577
(100 %)
5 diff
(99.2 %id)
BP195881 brain NCAM1.e 219 to 800 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
DA247558 brain NCAM1.e 220 to 809 2 to 591   capped   590/590
(100 %)
5 diff
(99.2 %id)
DA307412 hippocampus NCAM1.e 220 to 819 2 to 601   capped   600/600
(100 %)
6 diff
(99.0 %id)
DA315211 hippocampus NCAM1.e 220 to 797 2 to 579   capped   578/578
(100 %)
5 diff
(99.2 %id)
DA809699 brain NCAM1.e 220 to 878 2 to 660   capped   659/659
(100 %)
5 diff
(99.3 %id)
DA794172 brain NCAM1.e 231 to 868 2 to 639   capped   638/638
(100 %)
4 diff
(99.4 %id)
DA190011 amygdala NCAM1.e 234 to 816 2 to 585   capped   584/584
(100 %)
5 diff
(99.2 %id)
DA503827 brain NCAM1.e 240 to 804 2 to 566   capped   565/565
(100 %)
4 diff
(99.3 %id)
DA196331 amygdala NCAM1.e 273 to 826 3 to 557   capped   555/560
(99 %)
7 diff
(98.8 %id)
DA335578 hippocampus NCAM1.e 295 to 873 2 to 580   capped   579/579
(100 %)
6 diff
(99.0 %id)
DA211218 brain NCAM1.e 297 to 863 2 to 568   capped   567/567
(100 %)
6 diff
(99.0 %id)
DA398667 thalamus NCAM1.e 297 to 856 2 to 561   capped   560/560
(100 %)
7 diff
(98.8 %id)
DB129087 thymus NCAM1.e 300 to 854 2 to 556   capped   555/555
(100 %)
6 diff
(99.0 %id)
DA395527 thalamus NCAM1.e 301 to 770 2 to 471   capped   470/470
(100 %)
6 diff
(98.8 %id)
CD609189   NCAM1.e 310 to 875 568 to 3   tiling clone,   566/578
(97 %)
7 diff
(98.8 %id)
DA774237 brain NCAM1.e 317 to 898 2 to 582   capped   581/581
(100 %)
6 diff
(99.0 %id)
DA225374 brain NCAM1.e 333 to 901 2 to 569   capped   568/568
(100 %)
6 diff
(99.0 %id)
DA240262 brain NCAM1.e 333 to 924 2 to 592   capped   591/591
(100 %)
8 diff
(98.7 %id)
DA388667 thalamus NCAM1.e 333 to 848 2 to 516   capped   515/515
(100 %)
6 diff
(98.9 %id)
DA778634 brain NCAM1.e 333 to 915 2 to 584   capped   583/583
(100 %)
11 diff
(98.2 %id)
DA804799 brain NCAM1.e 333 to 864 2 to 532   capped   531/531
(100 %)
6 diff
(98.9 %id)
DA196083 amygdala NCAM1.e 338 to 903 2 to 566   capped   565/565
(100 %)
6 diff
(99.0 %id)
AK292453 testis NCAM1.e 339 to 3090 1 to 2754 Y442H R491Q E492G P493E S494P ... tiling clone,   2752/2754
(99 %)
8 diff
(99.8 %id)
DB070752 testis NCAM1.e 340 to 875 2 to 536   capped   535/535
(100 %)
9 diff
(98.4 %id)
DA499081 brain NCAM1.e 376 to 927 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA233746 brain NCAM1.e 390 to 908 61 to 579   capped   519/578
(89 %)
6 diff
(99.0 %id)
BX353961 Neuroblastoma Cot 25-normalized NCAM1.e 390 to 1085 21 to 719       699/719
(97 %)
20 diff
(97.3 %id)
DA505164 brain NCAM1.e 390 to 770 193 to 576   capped   384/575
(66 %)
12 diff
(98.0 %id)
BG910505 anaplastic oligodendroglioma with 1p/19qloss, brain NCAM1.e 390 to 826 155 to 589       435/593
(73 %)
9 diff
(98.5 %id)
DA775610 brain NCAM1.e 390 to 813 161 to 584   capped   424/583
(72 %)
6 diff
(99.0 %id)
AI919417 anaplastic oligodendroglioma, brain NCAM1.e 394 to 671 310 to 34   AAA   277/321
(86 %)
1 diff
(99.7 %id)
AU124625   NCAM1.e 449 to 1245 2 to 801   capped   800/801
(99 %)
6 diff
(99.3 %id)
DA324583 hippocampus NCAM1.e 588 to 1063 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
BP250662 hippocampus NCAM1.e 618 to 1199 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DA410935 thalamus NCAM1.e 624 to 1107 2 to 485   capped   484/484
(100 %)
0 diff
(100 %id)
DA091927 cerebellum NCAM1.e 696 to 1239 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA497487 brain NCAM1.e 728 to 1294 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA416815 thalamus NCAM1.e 733 to 1307 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB283892 uterus NCAM1.e 747 to 1288 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA313878 hippocampus NCAM1.e 754 to 1292 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
BP219778 caudate nucleus NCAM1.e 755 to 1334 1 to 581       581/583
(99 %)
3 diff
(99.5 %id)
BP251115 hippocampus NCAM1.e 756 to 1335 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DA243863 brain NCAM1.e 788 to 1384 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA312171 hippocampus NCAM1.e 852 to 1391 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
BF063348 colon, colon tumor, RER+ NCAM1.e 921 to 1435 523 to 5       523/523
(100 %)
8 diff
(98.5 %id)
BF529510 anaplastic oligodendroglioma with 1p/19qloss, brain NCAM1.e 1053 to 1787 1 to 734       734/734
(100 %)
4 diff
(99.5 %id)
DA215661 brain NCAM1.e 1076 to 1617 2 to 546   capped   545/545
(100 %)
4 diff
(99.3 %id)
BG419088 Kidney, renal cell adenocarcinoma NCAM1.e 1110 to 1829 1 to 715   available from MGC,   715/925
(77 %)
16 diff
(98.3 %id)
BC014205.
matches multiple genes
Kidney, Kidney, renal cell adenocarcinoma, renal cell adenocarcinoma NCAM1.e 1111 to 5376 1 to 4269   tiling clone, available from MGC, AAA Submitted on the opposite strand, also hits gene ZNF343andSNRPB 4267/4269
(99 %)
6 diff
(99.9 %id)
DA360025 subthalamic nucleus NCAM1.e 1194 to 1580 183 to 569   capped   387/570
(67 %)
8 diff
(98.6 %id)
DA111824 cerebellum NCAM1.e 1199 to 1786 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA233591 brain NCAM1.e 1235 to 1842 2 to 609   capped   608/608
(100 %)
0 diff
(100 %id)
BQ340230 nervous_normal NCAM1.e 1249 to 1599 351 to 1       351/359
(97 %)
0 diff
(100 %id)
DA098152 cerebellum NCAM1.e 1253 to 1805 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA098177 cerebellum NCAM1.e 1253 to 1810 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BF362915 nervous_normal NCAM1.e 1268 to 1664 402 to 9       394/412
(95 %)
5 diff
(98.8 %id)
BQ338798 nervous_normal NCAM1.e 1268 to 1661 418 to 24       395/432
(91 %)
3 diff
(99.4 %id)
DA333817 hippocampus NCAM1.e 1277 to 1862 2 to 588   capped   587/595
(98 %)
5 diff
(99.2 %id)
DA684705   NCAM1.e 1347 to 1884 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
X59400 lung, neuroectodermal NCAM1.e 1361 to 1474 1 to 114       114/114
(100 %)
0 diff
(100 %id)
DA508385 brain NCAM1.e 1424 to 2000 2 to 578   capped   577/577
(100 %)
6 diff
(99.0 %id)
AL119880 amygdala NCAM1.e 1465 to 1915 1 to 451       451/451
(100 %)
0 diff
(100 %id)
DA105737 cerebellum NCAM1.e 1489 to 2085 2 to 598   capped   597/597
(100 %)
2 diff
(99.7 %id)
DA510945 brain NCAM1.e 1491 to 2071 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA776420 brain NCAM1.e 1604 to 2182 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DR001778 fetal brain NCAM1.e 1648 to 2305 1 to 657     Submitted on the opposite strand 657/657
(100 %)
6 diff
(99.1 %id)
BP208633 cerebellum NCAM1.e 1651 to 2230 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DC334198 hippocampus NCAM1.e 1675 to 2165 125 to 615       491/615
(79 %)
8 diff
(98.7 %id)
BP216379 corpus callosum NCAM1.e 1707 to 2284 1 to 581       579/581
(99 %)
4 diff
(99.4 %id)
DA796219 brain NCAM1.e 1714 to 2318 2 to 606   capped   605/605
(100 %)
1 diff
(99.9 %id)
BP361957 thalamus NCAM1.e 1737 to 2319 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
M17410   NCAM1.e 1841 to 3490 1 to 1644   tiling clone,   1644/1644
(100 %)
4 diff
(99.8 %id)
BF935187 nervous_tumor NCAM1.e 1896 to 2206 319 to 7     Submitted on the opposite strand 311/319
(97 %)
2 diff
(99.4 %id)
BI035982 nervous_tumor NCAM1.e 1911 to 2200 376 to 84       290/376
(77 %)
1 diff
(99.8 %id)
DA724877   NCAM1.e 1932 to 2492 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA785190 brain NCAM1.e 1963 to 2554 2 to 596   capped   595/595
(100 %)
7 diff
(98.9 %id)
BF205051 muscle, rhabdomyosarcoma NCAM1.e 2032 to 2790 1 to 748       748/908
(82 %)
32 diff
(96.5 %id)
BE019087 muscle, rhabdomyosarcoma NCAM1.e 2034 to 2667 1 to 634       634/634
(100 %)
10 diff
(98.5 %id)
DA483015 brain NCAM1.e 2150 to 2927 2 to 783   capped   782/790
(98 %)
22 diff
(97.3 %id)
AW606571 head_neck NCAM1.e 2164 to 2315 151 to 1       151/170
(88 %)
1 diff
(99.5 %id)
BF953478 nervous_normal NCAM1.e 2165 to 2380 1 to 232       229/232
(98 %)
25 diff
(89.3 %id)
BI043790 ovary NCAM1.e 2172 to 2362 10 to 213       201/223
(90 %)
15 diff
(93.3 %id)
CN346391 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells NCAM1.e 2186 to 2660 1 to 475       475/475
(100 %)
2 diff
(99.6 %id)
BX351022 Neuroblastoma Cot 25-normalized NCAM1.e 2285 to 2937 683 to 26       658/830
(79 %)
23 diff
(97.3 %id)
DA508353 brain NCAM1.e 2299 to 2873 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BF341180 brain, glioblastoma with EGFR amplification NCAM1.e 2333 to 2801 1 to 469       469/469
(100 %)
0 diff
(100 %id)
DA297418 hippocampus NCAM1.e 2343 to 2932 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA297419 hippocampus NCAM1.e 2343 to 2925 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
AU148452   NCAM1.e 2351 to 2933 582 to 1       582/585
(99 %)
8 diff
(98.7 %id)
X55322 foetal NCAM1.e 2441 to 3484 21 to 1067       1047/1067
(98 %)
15 diff
(98.6 %id)
DA499671 brain NCAM1.e 2601 to 3153 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
BE839265 prostate_normal NCAM1.e 2603 to 2983 386 to 6       381/386
(98 %)
4 diff
(99.0 %id)
DB356582 whole embryo, mainly head NCAM1.e 2610 to 3147 538 to 1       538/542
(99 %)
10 diff
(98.2 %id)
BX955325   NCAM1.e 2616 to 2844 1 to 229       229/229
(100 %)
0 diff
(100 %id)
BF223218 pooled germ cell tumors NCAM1.e 2788 to 3147 360 to 1       360/360
(100 %)
0 diff
(100 %id)
BG910837 anaplastic oligodendroglioma with 1p/19qloss, brain NCAM1.e 2825 to 3562 1 to 739       739/739
(100 %)
2 diff
(99.8 %id)
N86265   NCAM1.e 2893 to 3118 1 to 226       226/226
(100 %)
2 diff
(99.2 %id)
DA206537 brain NCAM1.e 2945 to 3530 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
BF740095 brain, glioblastoma (pooled) NCAM1.e 2950 to 3434 485 to 1       485/485
(100 %)
3 diff
(99.4 %id)
DA508974 brain NCAM1.e 2972 to 3556 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA490840 brain NCAM1.e 2974 to 3543 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA074554 cerebellum NCAM1.e 2976 to 3547 2 to 574   capped   573/574
(99 %)
2 diff
(99.7 %id)
W25953 eye, retina NCAM1.e 2985 to 3477 503 to 11       493/530
(93 %)
0 diff
(100 %id)
DA154081 amygdala NCAM1.e 2994 to 3570 2 to 582   capped   581/586
(99 %)
5 diff
(99.2 %id)
W27627 eye, retina NCAM1.e 2996 to 3472 495 to 17       479/526
(91 %)
0 diff
(100 %id)
BI113719 muscle, rhabdomyosarcoma NCAM1.e 3029 to 3772 1 to 759       759/759
(100 %)
40 diff
(94.8 %id)
CA772230 Pancreas, Purified pancreatic islet NCAM1.e 3030 to 3768 1 to 739   fully sequenced,   739/739
(100 %)
9 diff
(98.8 %id)
DA916379 small intestine NCAM1.e 3043 to 3623 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DA704210   NCAM1.e 3048 to 3606 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
CB144289 brain NCAM1.e 3057 to 3665 1 to 609       609/609
(100 %)
3 diff
(99.6 %id)
BM711656 eye, human retina NCAM1.e 3057 to 3565 1 to 509   fully sequenced,   509/509
(100 %)
0 diff
(100 %id)
W26439 eye, retina NCAM1.e 3073 to 3484 412 to 1       412/438
(94 %)
2 diff
(99.6 %id)
W26573 eye, retina NCAM1.e 3080 to 3484 428 to 21       408/417
(97 %)
0 diff
(100 %id)
DA768898 brain NCAM1.e 3084 to 3615 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
CR600745 Neuroblastoma Cot 10-normalized NCAM1.e 3100 to 4094 1 to 995       995/995
(100 %)
0 diff
(100 %id)
AL520530 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized NCAM1.e 3100 to 4037 1 to 935       935/974
(95 %)
11 diff
(98.9 %id)
DA173224 amygdala NCAM1.e 3111 to 3662 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
AL157650 brain NCAM1.e 3127 to 3633 1 to 507       507/507
(100 %)
0 diff
(100 %id)
DA516216 brain NCAM1.e 3136 to 3694 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA268984 caudate nucleus NCAM1.e 3148 to 3704 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA780933 brain NCAM1.e 3218 to 3782 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BI467040 Pancreas, Purified pancreatic islet NCAM1.e 3234 to 3760 1 to 527       527/527
(100 %)
2 diff
(99.7 %id)
DA788793 brain NCAM1.e 3237 to 3789 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA744878   NCAM1.e 3290 to 3859 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA752967   NCAM1.e 3303 to 3846 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BE811796 amnion_normal NCAM1.e 3310 to 3626 339 to 25       315/339
(92 %)
0 diff
(100 %id)
DA794928 brain NCAM1.e 3344 to 3977 2 to 635   capped   634/634
(100 %)
2 diff
(99.7 %id)
AW058615 pooled NCAM1.e 3369 to 4126 759 to 5       755/759
(99 %)
0 diff
(100 %id)
DA069824 cerebellum NCAM1.e 3385 to 3825 2 to 442   capped   441/441
(100 %)
2 diff
(99.6 %id)
DA690566   NCAM1.e 3386 to 3943 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
AU253246 neuroblastoma NCAM1.e 3415 to 4099 1 to 683       683/683
(100 %)
11 diff
(98.4 %id)
DA089683 cerebellum NCAM1.e 3417 to 3991 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
CB069905 Pancreas, Purified pancreatic islet NCAM1.e 3433 to 3743 3 to 313   fully sequenced,   311/313
(99 %)
6 diff
(98.1 %id)
BQ343485 nervous_tumor NCAM1.e 3504 to 3803 318 to 19       300/318
(94 %)
0 diff
(100 %id)
BQ343510 nervous_tumor NCAM1.e 3504 to 3803 329 to 30       300/329
(91 %)
0 diff
(100 %id)
W68789 heart NCAM1.e 3507 to 3901 1 to 397       397/399
(99 %)
7 diff
(98.3 %id)
DA500465 brain NCAM1.e 3521 to 4090 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA526740 brain NCAM1.e 3530 to 4100 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
BU730268 eye, human retina NCAM1.e 3535 to 4125 609 to 19   fully sequenced, AAA   591/591
(100 %)
0 diff
(100 %id)
BE464078 pooled germ cell tumors NCAM1.e 3547 to 4125 579 to 1       579/579
(100 %)
1 diff
(99.9 %id)
AW903471 nervous_normal NCAM1.e 3551 to 3766 220 to 5       216/220
(98 %)
0 diff
(100 %id)
DA515234 brain NCAM1.e 3570 to 4128 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA714562   NCAM1.e 3574 to 4134 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA714588   NCAM1.e 3574 to 4134 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA083602 cerebellum NCAM1.e 3577 to 3903 2 to 328   capped   327/327
(100 %)
1 diff
(99.7 %id)
DA511094 brain NCAM1.e 3591 to 4125 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA270156 caudate nucleus NCAM1.e 3601 to 4017 2 to 418   capped   417/417
(100 %)
0 diff
(100 %id)
DA927063 small intestine NCAM1.e 3637 to 4209 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA207917 brain NCAM1.e 3638 to 4017 2 to 381   capped   380/380
(100 %)
0 diff
(100 %id)
DA366992 subthalamic nucleus NCAM1.e 3705 to 4207 2 to 505   capped   504/504
(100 %)
2 diff
(99.7 %id)
DA091316 cerebellum NCAM1.e 3707 to 4229 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
AA953129 carcinoid, lung NCAM1.e 3710 to 4054 1 to 345     Submitted on the opposite strand 345/345
(100 %)
0 diff
(100 %id)
BE222301 carcinoid, lung NCAM1.e 3710 to 4256 1 to 547   AAA Submitted on the opposite strand 547/547
(100 %)
0 diff
(100 %id)
CB068641 Pancreas, Purified pancreatic islet NCAM1.e 3713 to 4124 412 to 1   fully sequenced,   412/412
(100 %)
0 diff
(100 %id)
AI214500 carcinoid, lung NCAM1.e 3714 to 4124 1 to 411     Submitted on the opposite strand 411/411
(100 %)
1 diff
(99.8 %id)
BE295390 muscle, rhabdomyosarcoma NCAM1.e 3738 to 4380 1 to 642       642/654
(98 %)
12 diff
(98.2 %id)
CA771950 Pancreas, Purified pancreatic islet NCAM1.e 3738 to 4521 784 to 1   fully sequenced,   784/784
(100 %)
4 diff
(99.5 %id)
DA366499 subthalamic nucleus NCAM1.e 3766 to 4342 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
T08070   NCAM1.e 3793 to 4191 1 to 402       402/402
(100 %)
3 diff
(99.3 %id)
AI885308 anaplastic oligodendroglioma, brain NCAM1.e 3804 to 4260 457 to 1       457/457
(100 %)
1 diff
(99.8 %id)
TI_57244111   NCAM1.e 3821 to 4537 29 to 745       717/746
(96 %)
5 diff
(99.4 %id)
BI914774 brain NCAM1.e 3822 to 4537 1 to 716       716/717
(99 %)
5 diff
(99.4 %id)
BI819307 pooled brain, lung, testis NCAM1.e 3843 to 4621 1 to 786       786/790
(99 %)
41 diff
(94.9 %id)
TI_57200167   NCAM1.e 3843 to 4621 46 to 831       786/835
(94 %)
41 diff
(95.1 %id)
BM722789 eye, fetal eye NCAM1.e 3905 to 4357 1 to 453       453/453
(100 %)
0 diff
(100 %id)
DA714526   NCAM1.e 3988 to 4541 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
TI_153991658   NCAM1.e 4020 to 4515 573 to 78       496/658
(75 %)
0 diff
(100 %id)
AA747956 alveolar rhabdomyosarcoma NCAM1.e 4028 to 4262 235 to 1       235/238
(98 %)
3 diff
(98.8 %id)
BI522481 brain NCAM1.e 4113 to 4829 1 to 717       717/717
(100 %)
1 diff
(99.9 %id)
TI_44185122   NCAM1.e 4113 to 4829 28 to 744       717/744
(96 %)
6 diff
(99.2 %id)
AL138170 brain NCAM1.e 4121 to 4518 1 to 398       398/398
(100 %)
1 diff
(99.8 %id)
AI692435 carcinoid, lung NCAM1.e 4204 to 4514 1 to 311     Submitted on the opposite strand 311/311
(100 %)
1 diff
(99.7 %id)
BG164024 hypernephroma, cell line, Kidney NCAM1.e 4234 to 5011 19 to 793       775/1203
(64 %)
27 diff
(97.8 %id)
BE645816 Prostate NCAM1.e 4240 to 4517 278 to 1       278/278
(100 %)
2 diff
(99.3 %id)
AI919024 Prostate NCAM1.e 4313 to 4519 223 to 17   AAA   207/207
(100 %)
1 diff
(99.6 %id)
BY798016 eye NCAM1.e 4381 to 4962 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AW247520 lung, small cell carcinoma NCAM1.e 4382 to 4876 10 to 504       495/504
(98 %)
6 diff
(98.9 %id)
CD518707 White Matter NCAM1.e 4390 to 5268 1 to 880       880/884
(99 %)
5 diff
(99.5 %id)
BQ720682 sympathetic trunk NCAM1.e 4398 to 5164 1 to 768       768/946
(81 %)
16 diff
(98.4 %id)
AA339522 brain NCAM1.e 4416 to 4708 1 to 294       294/294
(100 %)
1 diff
(99.7 %id)
AA971535 carcinoid, lung NCAM1.e 4416 to 4906 1 to 491     Submitted on the opposite strand 491/491
(100 %)
0 diff
(100 %id)
BE348550 carcinoid, lung NCAM1.e 4416 to 4922 1 to 507     Submitted on the opposite strand 507/507
(100 %)
3 diff
(99.5 %id)
BE502993 carcinoid, lung NCAM1.e 4416 to 4856 1 to 441     Submitted on the opposite strand 441/441
(100 %)
2 diff
(99.6 %id)
AW952822   NCAM1.e 4417 to 4886 1 to 470       470/471
(99 %)
8 diff
(98.4 %id)
AI423328 brain, glioblastoma (pooled) NCAM1.e 4417 to 4877 1 to 461     Submitted on the opposite strand 461/461
(100 %)
2 diff
(99.6 %id)
AW341209 carcinoid, lung NCAM1.e 4421 to 4900 1 to 480     Submitted on the opposite strand 480/480
(100 %)
5 diff
(99.0 %id)
BI912618 brain NCAM1.e 4422 to 5113 1 to 697       697/914
(76 %)
13 diff
(98.6 %id)
TI_57238152   NCAM1.e 4422 to 5113 39 to 735       697/952
(73 %)
13 diff
(98.7 %id)
BE045371 carcinoid, lung NCAM1.e 4424 to 4903 1 to 480     Submitted on the opposite strand 480/480
(100 %)
0 diff
(100 %id)
BF448250 carcinoid, lung NCAM1.e 4427 to 4902 1 to 476     Submitted on the opposite strand 476/476
(100 %)
3 diff
(99.4 %id)
BF591692 carcinoid, lung NCAM1.e 4427 to 4980 1 to 555     Submitted on the opposite strand 555/557
(99 %)
10 diff
(98.3 %id)
AW409652 muscle, rhabdomyosarcoma NCAM1.e 4431 to 5027 1 to 597       597/597
(100 %)
4 diff
(99.4 %id)
BE019307 muscle, rhabdomyosarcoma NCAM1.e 4436 to 4836 1 to 401     Submitted on the opposite strand 401/401
(100 %)
3 diff
(99.3 %id)
EL953104 eyeball NCAM1.e 4441 to 4923 52 to 534       483/534
(90 %)
6 diff
(98.9 %id)
BE744383 adenocarcinoma cell line, ovary NCAM1.e 4450 to 5251 1 to 796       796/931
(85 %)
14 diff
(98.5 %id)
BF793344 adrenal cortex carcinoma, cell line, adrenal gland NCAM1.e 4488 to 5063 138 to 713       576/713
(80 %)
6 diff
(99.2 %id)
BF433769 carcinoid, lung NCAM1.e 4489 to 5042 1 to 554     Submitted on the opposite strand 554/554
(100 %)
3 diff
(99.5 %id)
AA341773 Kidney NCAM1.e 4519 to 4802 1 to 284       284/284
(100 %)
0 diff
(100 %id)
AA364465 pineal body NCAM1.e 4553 to 4884 1 to 334       334/334
(100 %)
2 diff
(99.5 %id)
AK054570   NCAM1.e 4555 to 5949 1 to 1395   tiling clone, available from FLJ,   1395/1395
(100 %)
3 diff
(99.8 %id)
DA000189   NCAM1.e 4556 to 5054 2 to 500   capped   499/504
(99 %)
2 diff
(99.7 %id)
TI_154110312   NCAM1.e 4602 to 5413 835 to 33       803/996
(80 %)
0 diff
(100 %id)
CA448062 Chondrosarcoma, Left Pubic Bone NCAM1.e 4619 to 5394 766 to 1       766/766
(100 %)
11 diff
(98.6 %id)
TI_149288351   NCAM1.e 4648 to 5376 829 to 96   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 801/1003
(79 %)
28 diff
(97.3 %id)
BI196418 brain, neuroblastoma NCAM1.e 4678 to 5376 1 to 699   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 699/699
(100 %)
4 diff
(99.5 %id)
T48198 fetal spleen, Spleen NCAM1.e 4684 to 4976 1 to 293   fully sequenced,   293/293
(100 %)
5 diff
(98.3 %id)
CA428419 Bone, Subchondral Bone NCAM1.e 4694 to 5394 697 to 1       697/699
(99 %)
5 diff
(99.3 %id)
BX353822 Neuroblastoma Cot 25-normalized NCAM1.e 4715 to 5761 1 to 1044       1044/1044
(100 %)
36 diff
(96.6 %id)
BM970307 lung NCAM1.e 4735 to 5394 659 to 1       659/659
(100 %)
1 diff
(99.9 %id)
AV725113 hypothalamus NCAM1.e 4738 to 5189 1 to 452       452/452
(100 %)
0 diff
(100 %id)
BG700182 brain, hippocampus NCAM1.e 4740 to 5395 1 to 655   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 655/656
(99 %)
10 diff
(98.5 %id)
AA126505 lung, lung carcinoma NCAM1.e 4747 to 5376 634 to 1       634/713
(88 %)
21 diff
(97.1 %id)
CB155182 brain NCAM1.e 4805 to 5319 1 to 515       515/515
(100 %)
2 diff
(99.7 %id)
DB300834.
matches multiple genes
cerebellum NCAM1.e 4825 to 5376 553 to 2     also hits gene huneya 552/553
(99 %)
0 diff
(100 %id)
W28020 eye, retina NCAM1.e 4840 to 5332 1 to 498       498/564
(88 %)
17 diff
(97.0 %id)
BU740256 eye, fetal eye NCAM1.e 4844 to 5394 550 to 1       550/550
(100 %)
2 diff
(99.7 %id)
BQ340631 nervous_normal NCAM1.e 4856 to 5256 32 to 432       401/432
(92 %)
6 diff
(98.7 %id)
F07294 brain, total brain NCAM1.e 4856 to 5034 1 to 179       179/179
(100 %)
3 diff
(98.4 %id)
BF941033 brain, oligodendroglioma NCAM1.e 4881 to 5376 497 to 1       497/577
(86 %)
2 diff
(99.7 %id)
H29813 whole brain NCAM1.e 4885 to 5182 1 to 301   fully sequenced,   301/301
(100 %)
1 diff
(99.7 %id)
AW022235 cochlea, ear NCAM1.e 4889 to 5376 1 to 492   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 492/492
(100 %)
9 diff
(98.2 %id)
BI494748 cochlea, ear NCAM1.e 4896 to 5376 1 to 481   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 481/481
(100 %)
5 diff
(99.0 %id)
BE205776 muscle, rhabdomyosarcoma NCAM1.e 4900 to 5388 489 to 1       489/489
(100 %)
0 diff
(100 %id)
BX094333 whole brain NCAM1.e 4906 to 5390 485 to 1     Submitted on the opposite strand 485/485
(100 %)
1 diff
(99.8 %id)
BF059414 pooled germ cell tumors NCAM1.e 4930 to 5384 455 to 1       455/455
(100 %)
0 diff
(100 %id)
AI582842 anaplastic oligodendroglioma, brain NCAM1.e 4932 to 5386 455 to 1       455/455
(100 %)
0 diff
(100 %id)
AI824967 pooled germ cell tumors NCAM1.e 4932 to 5384 453 to 1       453/453
(100 %)
0 diff
(100 %id)
AI360430 anaplastic oligodendroglioma, brain NCAM1.e 4935 to 5384 450 to 1       450/450
(100 %)
0 diff
(100 %id)
W68696 heart NCAM1.e 4937 to 5384 448 to 1       448/448
(100 %)
8 diff
(98.3 %id)
AI498024 anaplastic oligodendroglioma, brain NCAM1.e 4944 to 5380 436 to 1       436/436
(100 %)
1 diff
(99.8 %id)
T48199 fetal spleen, Spleen NCAM1.e 4949 to 5376 427 to 1   fully sequenced,   427/427
(100 %)
8 diff
(98.2 %id)
CR736577   NCAM1.e 4954 to 5376 1 to 424   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 424/425
(99 %)
4 diff
(99.1 %id)
AA916545 pooled NCAM1.e 4956 to 5376 420 to 1       420/420
(100 %)
5 diff
(98.9 %id)
TI_151718938   NCAM1.e 4956 to 5376 506 to 81   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 426/692
(61 %)
11 diff
(98.5 %id)
BI493305 cochlea, ear NCAM1.e 4957 to 5376 8 to 427   fully sequenced, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 420/427
(98 %)
9 diff
(97.9 %id)
AW245103 lung, small cell carcinoma NCAM1.e 4958 to 5386 429 to 1       429/429
(100 %)
0 diff
(100 %id)
BM697783.
matches multiple genes
eye, fetal eyes NCAM1.e 4958 to 5380 423 to 1     Submitted on the opposite strand, also hits gene PHB 423/423
(100 %)
3 diff
(99.3 %id)
BM712781 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid NCAM1.e 4963 to 5376 1 to 414   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 414/414
(100 %)
1 diff
(99.8 %id)
AW194584 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney NCAM1.e 4964 to 5389 426 to 1       426/426
(100 %)
8 diff
(98.2 %id)
BQ345124 nervous_tumor NCAM1.e 4968 to 5345 385 to 8       378/385
(98 %)
0 diff
(100 %id)
CF453690 peripheral nervous system NCAM1.e 4969 to 5725 32 to 786       755/786
(96 %)
6 diff
(99.3 %id)
AW129092 brain, tumor, 5 pooled (see description) NCAM1.e 4978 to 5391 414 to 1       414/414
(100 %)
0 diff
(100 %id)
AI962556 pooled germ cell tumors NCAM1.e 4984 to 5376 409 to 17   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 393/393
(100 %)
0 diff
(100 %id)
AW086469 ovary, papillary serous carcinoma NCAM1.e 4988 to 5384 397 to 1       397/397
(100 %)
4 diff
(99.0 %id)
BI493304 cochlea, ear NCAM1.e 4997 to 5380 384 to 1   fully sequenced, Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 384/384
(100 %)
0 diff
(100 %id)
W27873 eye, retina NCAM1.e 5006 to 5366 381 to 20       362/566
(63 %)
0 diff
(100 %id)
AI274486 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors NCAM1.e 5009 to 5382 374 to 1       374/374
(100 %)
0 diff
(100 %id)
AW612202 carcinoid, lung NCAM1.e 5015 to 5389 375 to 1       375/375
(100 %)
2 diff
(99.5 %id)
DB316764 brain NCAM1.e 5035 to 5376 344 to 2       343/344
(99 %)
0 diff
(100 %id)
BG991895 head_neck NCAM1.e 5039 to 5236 197 to 1       197/197
(100 %)
7 diff
(96.5 %id)
AA635551 normal prostate, Prostate NCAM1.e 5055 to 5386 332 to 1       332/332
(100 %)
3 diff
(99.1 %id)
AW768954 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney NCAM1.e 5071 to 5376 306 to 1       306/306
(100 %)
0 diff
(100 %id)
CK905552 insulinoma, Pancreas NCAM1.e 5080 to 5585 1 to 511   fully sequenced,   511/511
(100 %)
8 diff
(98.5 %id)
BM511183 insulinoma, Pancreas NCAM1.e 5080 to 5449 1 to 375   fully sequenced, Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 375/375
(100 %)
6 diff
(98.4 %id)
AA626085   NCAM1.e 5086 to 5381 296 to 1       296/296
(100 %)
9 diff
(97.0 %id)
BE699154 nervous_normal NCAM1.e 5091 to 5242 1 to 152       152/152
(100 %)
2 diff
(98.7 %id)
BE935908 nervous_normal NCAM1.e 5091 to 5202 115 to 4       112/118
(94 %)
0 diff
(100 %id)
W93948 heart NCAM1.e 5092 to 5378 1 to 285       285/285
(100 %)
2 diff
(99.3 %id)
BE935901 nervous_normal NCAM1.e 5102 to 5376 1 to 275   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 275/275
(100 %)
0 diff
(100 %id)
BE935923 nervous_normal NCAM1.e 5102 to 5218 119 to 3       117/119
(98 %)
0 diff
(100 %id)
BF090399 nervous_tumor NCAM1.e 5102 to 5306 210 to 7       204/210
(97 %)
0 diff
(100 %id)
BF365283 nervous_tumor NCAM1.e 5102 to 5209 1 to 107       107/107
(100 %)
1 diff
(99.1 %id)
BF365329 nervous_tumor NCAM1.e 5102 to 5347 252 to 11       242/252
(96 %)
0 diff
(100 %id)
AI586995 brain, tumor, 5 pooled (see description) NCAM1.e 5103 to 5380 278 to 1       278/278
(100 %)
2 diff
(99.3 %id)
TI_149295111   NCAM1.e 5106 to 5953 929 to 90   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 840/941
(89 %)
19 diff
(98.0 %id)
BE207833 muscle, rhabdomyosarcoma NCAM1.e 5107 to 5388 282 to 1       282/282
(100 %)
0 diff
(100 %id)
Z40393 brain, total brain NCAM1.e 5113 to 5376 263 to 1       263/263
(100 %)
1 diff
(99.7 %id)
H29814 whole brain NCAM1.e 5152 to 5386 241 to 1   fully sequenced,   241/241
(100 %)
4 diff
(98.4 %id)
BQ343550 nervous_tumor NCAM1.e 5178 to 5279 9 to 107       99/107
(92 %)
6 diff
(94.4 %id)
BE935905 nervous_normal NCAM1.e 5183 to 5304 1 to 122       122/122
(100 %)
2 diff
(98.4 %id)
AI918241 anaplastic oligodendroglioma, brain NCAM1.e 5185 to 5386 202 to 1       202/202
(100 %)
0 diff
(100 %id)
BX369750 Neuroblastoma Cot 25-normalized NCAM1.e 5261 to 5963 1 to 709       709/709
(100 %)
12 diff
(98.4 %id)
BM985236 lung NCAM1.e 5262 to 5953 708 to 15   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 694/694
(100 %)
5 diff
(99.3 %id)
CA430775 cell lines, Enchondroma NCAM1.e 5377 to 5959 597 to 13       585/597
(97 %)
0 diff
(100 %id)
BM709462 eye, optic nerve NCAM1.e 5383 to 5806 1 to 424       424/424
(100 %)
0 diff
(100 %id)
AW409739 muscle, rhabdomyosarcoma NCAM1.e 5390 to 5953 583 to 20   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 564/564
(100 %)
0 diff
(100 %id)
BM723720 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid NCAM1.e 5391 to 5957 1 to 567       567/567
(100 %)
0 diff
(100 %id)
TI_151727800   NCAM1.e 5391 to 5962 672 to 101   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 572/698
(81 %)
3 diff
(99.6 %id)
EL953532 eyeball NCAM1.e 5404 to 5949 1 to 546   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 546/546
(100 %)
3 diff
(99.5 %id)
BQ771488 Chondrosarcoma Grade II, Left Pelvis NCAM1.e 5405 to 5961 577 to 19   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 559/559
(100 %)
2 diff
(99.7 %id)
BM565486 insulinoma, Pancreas NCAM1.e 5417 to 5962 560 to 15   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 546/546
(100 %)
1 diff
(99.9 %id)
BM510929 insulinoma, Pancreas NCAM1.e 5419 to 5962 558 to 15   fully sequenced, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 544/544
(100 %)
0 diff
(100 %id)
TI_149312718   NCAM1.e 5421 to 5962 637 to 96   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 542/969
(55 %)
1 diff
(99.9 %id)
DB294917   NCAM1.e 5426 to 5953 528 to 1       528/528
(100 %)
0 diff
(100 %id)
DN992287 brain, whole brain NCAM1.e 5438 to 6142 9 to 713   tiling clone,   705/713
(98 %)
1 diff
(99.9 %id)
BF436366 fibrotheoma, ovary NCAM1.e 5459 to 5959 502 to 2       501/502
(99 %)
0 diff
(100 %id)
BM706422 eye, lens NCAM1.e 5465 to 5957 1 to 493       493/493
(100 %)
0 diff
(100 %id)
R76773 placenta NCAM1.e 5467 to 5961 1 to 507   fully sequenced,   507/507
(100 %)
20 diff
(96.1 %id)
AA130100 uterus NCAM1.e 5470 to 5597 1 to 129   fully sequenced,   129/129
(100 %)
0 diff
(100 %id)
BE205954 muscle, rhabdomyosarcoma NCAM1.e 5473 to 5720 248 to 1     Submitted on the opposite strand 248/248
(100 %)
0 diff
(100 %id)
W94001 heart NCAM1.e 5475 to 5963 500 to 9       492/505
(97 %)
0 diff
(100 %id)
AA773074 lung, lung carcinoma NCAM1.e 5480 to 5952 473 to 1       473/473
(100 %)
1 diff
(99.8 %id)
DB547983 hippocampus NCAM1.e 5489 to 5953 1 to 465     Submitted on the opposite strand 465/465
(100 %)
0 diff
(100 %id)
AI870827 anaplastic oligodendroglioma, brain NCAM1.e 5499 to 5949 451 to 1       451/451
(100 %)
0 diff
(100 %id)
BE222655 brain, oligodendroglioma NCAM1.e 5500 to 5937 1 to 438     Submitted on the opposite strand 438/438
(100 %)
0 diff
(100 %id)
AA255799 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus NCAM1.e 5504 to 5888 1 to 386       386/386
(100 %)
3 diff
(99.3 %id)
AI126674 uterus NCAM1.e 5506 to 5960 456 to 3       454/456
(99 %)
0 diff
(100 %id)
AI083705 anaplastic oligodendroglioma, brain NCAM1.e 5510 to 5962 453 to 1       453/453
(100 %)
0 diff
(100 %id)
AA082299 heart NCAM1.e 5516 to 5619 1 to 104       104/104
(100 %)
0 diff
(100 %id)
BE762834 nervous_tumor NCAM1.e 5520 to 5891 388 to 19       370/388
(95 %)
0 diff
(100 %id)
AI273489 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus NCAM1.e 5521 to 5962 442 to 1       442/442
(100 %)
0 diff
(100 %id)
AI275482 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus NCAM1.e 5527 to 5962 436 to 1       436/436
(100 %)
0 diff
(100 %id)
AI393684 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus NCAM1.e 5527 to 5956 430 to 1       430/430
(100 %)
4 diff
(99.1 %id)
AI423593 brain, glioblastoma (pooled) NCAM1.e 5528 to 5953 425 to 1       425/425
(100 %)
1 diff
(99.8 %id)
AI264045 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus NCAM1.e 5529 to 5962 434 to 1       434/434
(100 %)
0 diff
(100 %id)
AI350937 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus NCAM1.e 5529 to 5959 430 to 1       430/430
(100 %)
4 diff
(99.1 %id)
CK905551 insulinoma, Pancreas NCAM1.e 5555 to 5970 416 to 1   fully sequenced,   416/416
(100 %)
6 diff
(98.6 %id)
AA130101 uterus NCAM1.e 5567 to 5962 400 to 1   fully sequenced,   400/400
(100 %)
4 diff
(99.0 %id)
AA976695 carcinoid, lung NCAM1.e 5586 to 5952 367 to 1       367/367
(100 %)
0 diff
(100 %id)
AI091146 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus NCAM1.e 5586 to 5962 377 to 1       377/378
(99 %)
0 diff
(100 %id)
DV460030 cochlea, ear NCAM1.e 5592 to 5797 206 to 1     Submitted on the opposite strand 206/206
(100 %)
0 diff
(100 %id)
AW131780 brain, medulloblastoma NCAM1.e 5603 to 5962 376 to 17   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 360/360
(100 %)
3 diff
(99.2 %id)
BF956459 nervous_normal NCAM1.e 5620 to 5735 141 to 25       117/141
(82 %)
0 diff
(100 %id)
AI350938 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus NCAM1.e 5644 to 5960 318 to 3       316/318
(99 %)
0 diff
(100 %id)
BE936380 nervous_tumor NCAM1.e 5645 to 5885 1 to 240       240/240
(100 %)
1 diff
(99.6 %id)
AA774090   NCAM1.e 5649 to 5962 328 to 15   AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 314/314
(100 %)
0 diff
(100 %id)
AI206751   NCAM1.e 5650 to 5963 316 to 4       313/316
(99 %)
0 diff
(100 %id)
R76460 placenta NCAM1.e 5652 to 5938 293 to 1   fully sequenced,   293/293
(100 %)
1 diff
(99.7 %id)
CB410925 cochlea, ear NCAM1.e 5673 to 5799 127 to 1       127/136
(93 %)
0 diff
(100 %id)
AI784675 uterus NCAM1.e 5704 to 5960 258 to 3       256/258
(99 %)
0 diff
(100 %id)
BE699162 nervous_normal NCAM1.e 5727 to 5885 1 to 159       159/159
(100 %)
0 diff
(100 %id)
BE699163 nervous_normal NCAM1.e 5727 to 5829 103 to 1       103/103
(100 %)
3 diff
(97.1 %id)
BE935920 nervous_normal NCAM1.e 5728 to 5885 1 to 158       158/158
(100 %)
0 diff
(100 %id)
R49064 whole brain NCAM1.e 5733 to 5959 239 to 13       227/239
(94 %)
0 diff
(100 %id)
AK057509 testis NCAM1.f 1 to 3305 2 to 3309 R481Q E482G P483E S484P A485S ... tiling clone, available from FLJ,   3307/3309
(99 %)
4 diff
(99.9 %id)
DB025933 testis NCAM1.f 1 to 543 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA746886   NCAM1.f 2425 to 2984 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB336538 testis NCAM1.f 2715 to 3305 591 to 1       591/591
(100 %)
3 diff
(99.5 %id)
DA227278 brain NCAM1.g 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
BP251027 hippocampus NCAM1.g 51 to 628 1 to 579       579/582
(99 %)
4 diff
(99.4 %id)
DA218494 brain NCAM1.g 509 to 1062 2 to 555   tiling clone, capped   554/554
(100 %)
1 diff
(99.9 %id)
BG911149 anaplastic oligodendroglioma with 1p/19qloss, brain NCAM1.g 905 to 1539 1 to 636   tiling clone,   636/701
(90 %)
19 diff
(97.3 %id)
BG199429   NCAM1.g 1136 to 1921 1 to 786   tiling clone,   786/787
(99 %)
8 diff
(99.0 %id)
DA773623 brain NCAM1.g 1136 to 1633 2 to 499   tiling clone, capped   498/498
(100 %)
6 diff
(98.8 %id)
BG197334   NCAM1.g 1138 to 1928 1 to 791   tiling clone,   791/791
(100 %)
7 diff
(99.2 %id)
BG181803   NCAM1.g 1144 to 1865 44 to 771   tiling clone,   728/838
(86 %)
70 diff
(91.7 %id)
BC029119 Brain, adult, 6 pooled whole brains NCAM1.h 1 to 1841 1 to 1842 H43A R44Q I45N Y46L R47P ... tiling clone, available from MGC, AAA   1842/1842
(100 %)
5 diff
(99.8 %id)
DA175358 amygdala NCAM1.i 1 to 559 2 to 560   tiling clone, capped   559/559
(100 %)
1 diff
(99.9 %id)
DA496915 brain NCAM1.i 372 to 948 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA411553 thalamus NCAM1.i 391 to 944 3 to 556   capped   554/555
(99 %)
0 diff
(100 %id)
AK056258   NCAM1.i 478 to 2673 1 to 2196   tiling clone, available from FLJ,   2196/2196
(100 %)
1 diff
(100.0 %id)
DA702819   NCAM1.i 479 to 959 2 to 482   capped   481/481
(100 %)
0 diff
(100 %id)
DA784563 brain NCAM1.i 481 to 1001 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DA804371 brain NCAM1.i 561 to 1108 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA797059 brain NCAM1.i 571 to 1001 2 to 432   capped   431/431
(100 %)
1 diff
(99.8 %id)
DA773483 brain NCAM1.i 607 to 1163 11 to 568   capped   558/567
(98 %)
6 diff
(99.0 %id)
DB323793   NCAM1.i 2360 to 2673 314 to 1       314/314
(100 %)
1 diff
(99.7 %id)
AK299865 brain NCAM1.j 1 to 1176 7 to 1185 R122K E123G P124E S125P A126S ... tiling clone,   1185/1185
(100 %)
7 diff
(99.5 %id)
DC377473 brain NCAM1.j 1 to 553 7 to 562       562/562
(100 %)
7 diff
(98.8 %id)
DA790965 brain NCAM1.k 1 to 568 2 to 570 R45X E46* tiling clone, capped   569/569
(100 %)
5 diff
(99.2 %id)
M22094   NCAM1.l 1 to 1418 4 to 1423 exact tiling clone,   1423/1423
(100 %)
1 diff
(100.0 %id)
DA409635 thalamus NCAM1.m 1 to 515 2 to 516   tiling clone, capped   515/515
(100 %)
0 diff
(100 %id)
DA256601 caudate nucleus NCAM1.m 58 to 625 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB361357 mammary gland NCAM1.m 392 to 912 520 to 1   tiling clone,   520/522
(99 %)
12 diff
(97.8 %id)
DA302314 hippocampus NCAM1.n 1 to 470 2 to 474   tiling clone, capped   473/473
(100 %)
2 diff
(99.6 %id)
DA401816 thalamus NCAM1.n 137 to 664 2 to 533   tiling clone, capped   532/532
(100 %)
4 diff
(99.3 %id)
AA249142   NCAM1.n 633 to 1058 1 to 427 L33S S34P S35P E36S W37G ... tiling clone,   427/427
(100 %)
3 diff
(99.3 %id)
BM692477 eye, Retina Foveal and Macular NCAM1.n 687 to 970 1 to 284   tiling clone, fully sequenced,   284/284
(100 %)
0 diff
(100 %id)
BM664047 eye, Retina Foveal and Macular NCAM1.n 909 to 1263 371 to 17   tiling clone, fully sequenced, AAA   355/355
(100 %)
0 diff
(100 %id)
DA782586 brain NCAM1.o 1 to 584 2 to 585 K52E tiling clone, capped   584/584
(100 %)
6 diff
(99.0 %id)
DA233100 brain NCAM1.p 1 to 586 2 to 588   tiling clone, capped   587/587
(100 %)
5 diff
(99.2 %id)
DA795124 brain NCAM1.p 6 to 428 2 to 424   tiling clone, capped   423/572
(73 %)
5 diff
(99.2 %id)
DA759625   NCAM1.p 42 to 428 12 to 399   capped   388/503
(77 %)
7 diff
(98.7 %id)
DA769842 brain NCAM1.p 196 to 775 2 to 581   tiling clone, capped   580/580
(100 %)
4 diff
(99.4 %id)
BP231034 brain NCAM1.p 199 to 780 1 to 584 E4K Q6L S45X L82P E83* tiling clone,   584/584
(100 %)
9 diff
(98.5 %id)
DA568460 whole embryo, mainly head NCAM1.q-u 1 to 667 2 to 669   tiling clone, capped   668/669
(99 %)
2 diff
(99.8 %id)
AY358815   NCAM1.q-u 643 to 1465 1 to 822 exact tiling clone,   822/823
(99 %)
4 diff
(99.6 %id)
DB354969 whole embryo, mainly head NCAM1.q-u 866 to 1443 577 to 1   tiling clone,   577/577
(100 %)
10 diff
(98.3 %id)
DB569024 hypothalamus NCAM1.q-u 959 to 1443 1 to 485     Submitted on the opposite strand 485/485
(100 %)
3 diff
(99.4 %id)
AL832563 brain NCAM1.r 1 to 3021 1 to 3021   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (27/27 A in genome downstream of last aligned base) 3021/3021
(100 %)
0 diff
(100 %id)
DA788352 brain NCAM1.r 144 to 712 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA802211 brain NCAM1.r 236 to 795 2 to 561 A27T capped   560/560
(100 %)
1 diff
(99.9 %id)
DA407487 thalamus NCAM1.s 1 to 559 2 to 560   tiling clone, capped   559/559
(100 %)
1 diff
(99.9 %id)
DA252937 caudate nucleus NCAM1.t 1 to 564 2 to 566 V15R V16G A17G E18* tiling clone, capped   565/565
(100 %)
1 diff
(99.9 %id)
DA494298 brain NCAM1.u 1 to 462 2 to 463   tiling clone, capped   462/462
(100 %)
1 diff
(99.8 %id)
DB497927 hypothalamus NCAM1.u 396 to 884 1 to 489   tiling clone,   489/489
(100 %)
3 diff
(99.4 %id)
BP201091 amygdala NCAM1.u 835 to 1391 1 to 556 exact tiling clone,   556/583
(95 %)
2 diff
(99.7 %id)
DB280823 uterus NCAM1.va 1 to 530 2 to 531   tiling clone, capped   530/530
(100 %)
6 diff
(98.9 %id)
BE670666 carcinoid, lung NCAM1.va 432 to 997 566 to 1 exact tiling clone,   566/568
(99 %)
4 diff
(99.3 %id)
AA937793 carcinoid, lung NCAM1.va 601 to 993 393 to 1   tiling clone,   393/393
(100 %)
3 diff
(99.3 %id)
T06766   NCAM1.vb-u 1 to 400 34 to 434   tiling clone,   401/434
(92 %)
5 diff
(98.9 %id)
AA334449   NCAM1.vb-u 316 to 488 1 to 173       173/173
(100 %)
0 diff
(100 %id)
AW966126   NCAM1.vb-u 317 to 870 1 to 549   tiling clone,   549/596
(92 %)
14 diff
(97.7 %id)
DA418774 thalamus NCAM1.vc 1 to 635 2 to 636   tiling clone, capped   635/635
(100 %)
4 diff
(99.4 %id)
BI041199 nervous_tumor NCAM1.vd-u 1 to 522 1 to 522 exact tiling clone,   522/529
(98 %)
1 diff
(99.9 %id)
BI038396 nervous_tumor NCAM1.vd-u 173 to 519 348 to 2       347/521
(66 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q-u, .r, .s, .t, .u, .va, .vb-u, .vc, .vd-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI