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Gene B9D2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
71 supporting clones for gene B9D2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC004157 Lung, small cell carcinoma .b 42 to 1026 1 to 985 I11M tiling clone, available from MGC, AAA   985/985
(100 %)
1 diff
(99.9 %id)
BC004444 Lung, small cell carcinoma .b 42 to 1026 1 to 985   available from MGC, AAA   985/985
(100 %)
1 diff
(99.9 %id)
BF364906 nervous_normal .b 1 to 579 1 to 577   tiling clone,   577/577
(100 %)
6 diff
(99.0 %id)
BF826231 head_normal .d-u 1 to 442 106 to 547 W6G W10G W14G F36L C46G tiling clone,   487/547
(89 %)
23 diff
(95.8 %id)
BX280308 pooled pancreas and spleen .b 42 to 565 22 to 545       524/545
(96 %)
7 diff
(98.8 %id)
CR749084 brain .b 46 to 545 1 to 501       501/501
(100 %)
3 diff
(99.5 %id)
CV025994 mixed .b 221 to 754 1 to 534 I11M     534/627
(85 %)
6 diff
(99.1 %id)
DT220852 brain .b 28 to 722 1 to 695       695/695
(100 %)
4 diff
(99.5 %id)
BP392668 pancreatic islet .a-u 817 to 1264 1 to 448     Submitted on the opposite strand 448/448
(100 %)
1 diff
(99.8 %id)
AA452448.
matches multiple genes
  .b 42 to 526 1 to 484     also hits gene jyser 484/484
(100 %)
3 diff
(99.4 %id)
AA452277.
matches multiple genes
  .a-u 896 to 1265 371 to 3     also hits gene storslawby 369/371
(99 %)
0 diff
(100 %id)
AA594941 Prostate, prostate tumor .e 12 to 385 1 to 373     Submitted on the opposite strand 373/373
(100 %)
4 diff
(99.0 %id)
AA843931 parathyroid gland, parathyroid tumor .a-u 780 to 1264 493 to 11   AAA   483/483
(100 %)
6 diff
(98.8 %id)
AI097326 uterus .a-u 807 to 1262 456 to 1       456/456
(100 %)
1 diff
(99.8 %id)
AI129653 uterus .a-u 881 to 1263 385 to 3       383/385
(99 %)
0 diff
(100 %id)
AI471868 Kidney .a-u 927 to 1267 358 to 20   tiling clone, AAA   339/340
(99 %)
11 diff
(96.8 %id)
AI498322 Kidney .a-u 969 to 1262 294 to 1       294/294
(100 %)
2 diff
(99.4 %id)
AI743007 pooled .a-u 800 to 1267 471 to 4       468/471
(99 %)
0 diff
(100 %id)
AI932223 anaplastic oligodendroglioma, brain .a-u 911 to 1267 371 to 15   AAA   357/357
(100 %)
4 diff
(98.9 %id)
AI972225 Prostate .a-u 1075 to 1263 189 to 1       189/189
(100 %)
0 diff
(100 %id)
AW207114   .a-u 943 to 1264 339 to 18   AAA   322/336
(95 %)
2 diff
(99.5 %id)
AW301661 Kidney .e 35 to 421 388 to 1   tiling clone,   388/388
(100 %)
5 diff
(98.8 %id)
AW247300 lung, small cell carcinoma .b 530 to 1026 507 to 11   fully sequenced, AAA   497/497
(100 %)
0 diff
(100 %id)
AW247444 lung, small cell carcinoma .b 38 to 560 6 to 528   fully sequenced,   523/528
(99 %)
7 diff
(98.7 %id)
AW246164 lung, small cell carcinoma .b 38 to 176 6 to 144       139/144
(96 %)
6 diff
(95.9 %id)
AW518214 lymph node, lymphoma, follicular mixed small and largecell .a-u 1042 to 1263 223 to 2       222/223
(99 %)
0 diff
(100 %id)
BE045623 carcinoid, lung .e 1 to 418 418 to 1 exact tiling clone,   418/418
(100 %)
1 diff
(99.8 %id)
BF511435   .a-u 999 to 1262 281 to 18   AAA   264/264
(100 %)
3 diff
(98.9 %id)
CB050841 Prostate .a-u 964 to 1262 328 to 30   AAA   299/299
(100 %)
2 diff
(99.4 %id)
BE389785 endometrium, adenocarcinoma cell line, uterus .b 61 to 744 1 to 680       680/708
(96 %)
22 diff
(96.9 %id)
BF438399 Prostate .a-u 990 to 1263 274 to 1       274/274
(100 %)
1 diff
(99.7 %id)
BE794701 lung, small cell carcinoma .b 67 to 856 1 to 780 L163C L164C L165S R166A N167I ...     780/1027
(75 %)
21 diff
(98.0 %id)
BF526054 brain, glioblastoma with EGFR amplification .b 32 to 650 1 to 632       632/1003
(63 %)
30 diff
(97.1 %id)
BG763501 melanotic melanoma, high MDR (cell line), skin .a-u 663 to 1011 473 to 813   tiling clone,   341/883
(38 %)
17 diff
(98.1 %id)
BI829218 brain, medulla .b 42 to 800 1 to 756 I11M L116W G117A S118V W119G ...     756/756
(100 %)
5 diff
(99.4 %id)
BI820173 pooled brain, lung, testis .b 48 to 849 1 to 800 exact tiling clone,   800/800
(100 %)
4 diff
(99.5 %id)
BI833871 pooled pancreas and spleen .b 49 to 890 1 to 842 I11M L149P H150A T151H A152S ...     842/842
(100 %)
10 diff
(98.9 %id)
BM020284 astrocytoma grade IV, cell line, brain .b 47 to 818 1 to 774 I11M C97X G117W S118Q W119L ...     774/776
(99 %)
8 diff
(99.0 %id)
BM923726 pooled colon, kidney, stomach .b 49 to 836 1 to 792 I11M     792/1056
(75 %)
11 diff
(99.0 %id)
BQ009155 Chondrosarcoma, Left Pubic Bone .b 418 to 1026 627 to 19   AAA   609/609
(100 %)
5 diff
(99.2 %id)
BQ052502 blood, natural killer cells, cell line .a-u 684 to 1262 1 to 579   tiling clone, AAA   579/579
(100 %)
0 diff
(100 %id)
BQ427546 melanotic melanoma, skin .b 28 to 804 1 to 783 G117X D138G T139H I140H Y141L ...     783/850
(92 %)
10 diff
(98.9 %id)
BQ645865 hepatocellular carcinoma, cell line, Liver .a-u 4 to 445 1 to 445       445/1096
(40 %)
9 diff
(99.2 %id)
BQ647466 hepatocellular carcinoma, cell line, Liver .a-u 1 to 718 1 to 728   tiling clone,   728/969
(75 %)
26 diff
(97.4 %id)
BQ900587 brain, neuroblastoma, cell line .b 5 to 582 72 to 654   tiling clone,   583/1369
(42 %)
20 diff
(98.6 %id)
CD242596 brain, Pituitary .a-u 1067 to 1262 24 to 219   AAA   196/219
(89 %)
6 diff
(97.3 %id)
CF126641 Chondrosarcoma Lung Metastasis cell lines, lung .c 4 to 847 1 to 832 exact tiling clone,   832/846
(98 %)
20 diff
(97.7 %id)
TI_57199585   .b 48 to 849 72 to 871 exact     800/871
(91 %)
10 diff
(98.9 %id)
TI_57176135   .b 36 to 800 59 to 820 I11M L116W G117A S118V W119G ...     762/820
(92 %)
11 diff
(98.7 %id)
TI_57166963   .b 42 to 890 30 to 878 I11M L149P H150A T151H A152S ...     849/878
(96 %)
16 diff
(98.2 %id)
TI_59391068   .b 48 to 818 101 to 873 I11M C97X G117W S118Q W119L ...     773/775
(99 %)
7 diff
(99.1 %id)
N88663   .b 22 to 236 1 to 219       219/219
(100 %)
12 diff
(94.6 %id)
CB128896 Liver .b 28 to 559 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
NM_030578.3   .b 1 to 1031 1 to 1031 exact RefSeq, AAA   1031/1031
(100 %)
0 diff
(100 %id)
BP316851 pericardium .b 28 to 609 1 to 583       583/583
(100 %)
7 diff
(98.8 %id)
BM820125 stomach .b 28 to 210 1 to 183       183/183
(100 %)
3 diff
(98.4 %id)
BM833644 stomach .b 28 to 482 1 to 455       455/455
(100 %)
0 diff
(100 %id)
BM797302 Ascites, stomach .b 46 to 557 1 to 512       512/512
(100 %)
1 diff
(99.9 %id)
TI_1948144311   .b 220 to 750 128 to 658 I11M H136D D169R Y171* fully sequenced,   531/658
(80 %)
17 diff
(97.5 %id)
TI_1948144312   .b 357 to 754 521 to 124   fully sequenced,   398/521
(76 %)
0 diff
(100 %id)
TI_1948144554   .b 220 to 754 126 to 659 I11M N167I E174S C175A     534/577
(92 %)
13 diff
(97.8 %id)
TI_149285634   .b 340 to 1028 774 to 87   AAA   688/688
(100 %)
12 diff
(98.3 %id)
TI_154189750   .c 1 to 847 45 to 879 exact     835/992
(84 %)
21 diff
(97.9 %id)
TI_159723629   .b 300 to 1026 792 to 71   AAA   722/951
(75 %)
9 diff
(99.1 %id)
BM971457 lung .a-u 669 to 1264 615 to 17   AAA   599/601
(99 %)
4 diff
(99.4 %id)
BU609059 Human Lung Epithelial cells, lung .b 288 to 1031 756 to 19   AAA   738/738
(100 %)
5 diff
(99.4 %id)
CA945159 Human Lung Epithelial cells, lung .b 312 to 1026 729 to 19   AAA   711/711
(100 %)
4 diff
(99.5 %id)
CB241683 Human Lung Epithelial cells, lung .a-u 675 to 1264 606 to 17   tiling clone, AAA   590/590
(100 %)
1 diff
(99.9 %id)
BM666419 eye, optic nerve .b 391 to 1030 658 to 19   AAA   640/640
(100 %)
2 diff
(99.7 %id)
BM713204 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 70 to 690 1 to 621       621/621
(100 %)
2 diff
(99.7 %id)
BQ575046 Chondrosarcoma Grade II, Left Pelvis .b 409 to 1026 636 to 19   AAA   618/618
(100 %)
0 diff
(100 %id)
BQ576019 Chondrosarcoma Grade II, Left Pelvis .b 347 to 1031 700 to 19   AAA   682/682
(100 %)
6 diff
(99.2 %id)
CB529481 Aveolar Macrophage, lung .b 390 to 1026 655 to 19   AAA   637/637
(100 %)
1 diff
(99.9 %id)
N88663   .b 22 to 236 1 to 219       219/219
(100 %)
12 diff
(94.6 %id)
CB128896 Liver .b 28 to 559 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
NM_030578.3 NM_030578 B9D2.bAug10 1031 1031 NM_030578     1031 0
BP316851 PCD02403 B9D2.bAug10 609 583 PCD02403     583 7
BM820125 S20T665307-6-G12 B9D2.bAug10 210 183 S20T665307-6-G12     183 3
BM833644 S20T665307-47-F12 B9D2.bAug10 482 455 S20T665307-47-F12     455 0
BM797302 S22SNU16n1-68-F11 B9D2.bAug10 557 512 S22SNU16n1-68-F11     512 1
BM797302 S22SNU16n1-68-F11 B9D2.bAug10 557 512 S22SNU16n1-68-F11     512 1
TI_1948144311 SC_11074_3_B6 B9D2.bAug10 750 658 SC_11074_3_B6     531 17
TI_1948144312 SC_11074_3_B6 B9D2.bAug10 754 124 SC_11074_3_B6     398 0
TI_1948144554 SC_11074_4_B6 B9D2.bAug10 754 659 SC_11074_4_B6     534 13
TI_149285634 TI_149285634 B9D2.bAug10 1028 87 TI_149285634     688 12
TI_154189750 TI_154189750 B9D2.cAug10 847 879 TI_154189750     835 21
TI_159723629 TI_159723629 B9D2.bAug10 1026 71 TI_159723629     722 9
BM971457 UI-CF-EC1-abj-b-08-0-UI B9D2.aAug10-unspliced 1264 17 UI-CF-EC1-abj-b-08-0-UI     599 4
BU609059 UI-CF-FN0-aer-m-12-0-UI B9D2.bAug10 1031 19 UI-CF-FN0-aer-m-12-0-UI     738 5
BU609059 UI-CF-FN0-aer-m-12-0-UI B9D2.bAug10 1031 19 UI-CF-FN0-aer-m-12-0-UI     738 5
CA945159 UI-CF-FN0-aft-k-08-0-UI B9D2.bAug10 1026 19 UI-CF-FN0-aft-k-08-0-UI     711 4
CA945159 UI-CF-FN0-aft-k-08-0-UI B9D2.bAug10 1026 19 UI-CF-FN0-aft-k-08-0-UI     711 4
CB241683 UI-CF-FN0-afz-f-19-0-UI B9D2.aAug10-unspliced 1264 17 UI-CF-FN0-afz-f-19-0-UI     590 1
CB241683 UI-CF-FN0-afz-f-19-0-UI B9D2.aAug10-unspliced 1264 17 UI-CF-FN0-afz-f-19-0-UI     590 1
BM666419 UI-E-CQ1-aev-c-02-0-UI B9D2.bAug10 1030 19 UI-E-CQ1-aev-c-02-0-UI     640 2
BM666419 UI-E-CQ1-aev-c-02-0-UI B9D2.bAug10 1030 19 UI-E-CQ1-aev-c-02-0-UI     640 2
BM713204 UI-E-EJ0-ahn-n-09-0-UI B9D2.bAug10 690 621 UI-E-EJ0-ahn-n-09-0-UI     621 2
BM713204 UI-E-EJ0-ahn-n-09-0-UI B9D2.bAug10 690 621 UI-E-EJ0-ahn-n-09-0-UI     621 2
BQ575046 UI-H-EZ1-bbd-o-21-0-UI B9D2.bAug10 1026 19 UI-H-EZ1-bbd-o-21-0-UI     618 0
BQ575046 UI-H-EZ1-bbd-o-21-0-UI B9D2.bAug10 1026 19 UI-H-EZ1-bbd-o-21-0-UI     618 0
BQ576019 UI-H-EZ1-bbh-p-15-0-UI B9D2.bAug10 1031 19 UI-H-EZ1-bbh-p-15-0-UI     682 6
BQ576019 UI-H-EZ1-bbh-p-15-0-UI B9D2.bAug10 1031 19 UI-H-EZ1-bbh-p-15-0-UI     682 6
CB529481 UI-H-FT2-bjh-o-19-0-UI B9D2.bAug10 1026 19 UI-H-FT2-bjh-o-19-0-UI     637 1
CB529481 UI-H-FT2-bjh-o-19-0-UI B9D2.bAug10 1026 19 UI-H-FT2-bjh-o-19-0-UI     637 1
? Gene Summary Gene on genome mRNA:.a-u, .b, .c, .d-u, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC