To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene KCNJ11TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
38 supporting clones for gene KCNJ11 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
F21303 pectoral muscle (after mastectomy) .c 1696 to 2079 1 to 389       389/400
(97 %)
10 diff
(97.5 %id)
AK301550 breast, tumor tissue .c 1 to 1300 1 to 1300 V250I K283E tiling clone,   1300/1302
(99 %)
4 diff
(99.7 %id)
AK314943 brain .a-u 411 to 1741 1 to 1331 exact tiling clone,   1331/1331
(100 %)
0 diff
(100 %id)
BC064497 Spleen .a-u 1 to 2800 1 to 2799 K23E V337I tiling clone, available from MGC, AAA   2799/2799
(100 %)
6 diff
(99.8 %id)
BC112358 PCR rescued clones .a-u 469 to 1914 1 to 1446 K23E V337I     1446/1446
(100 %)
4 diff
(99.8 %id)
BE159475 head_neck .b 883 to 1357 480 to 8   tiling clone, Submitted on the opposite strand 473/480
(98 %)
0 diff
(100 %id)
BF842095 head_neck .b 658 to 1191 12 to 538       527/552
(95 %)
15 diff
(97.3 %id)
DA074949 cerebellum .a-u 680 to 1247 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DC305775 cerebellum .c 906 to 1463 1 to 558       558/558
(100 %)
3 diff
(99.5 %id)
DA201813 brain .b 1 to 465 2 to 468   tiling clone, capped   467/467
(100 %)
3 diff
(99.4 %id)
BX281091 duodenal adenocarcinoma, cell line, small intestine .b 288 to 771 1 to 484       484/484
(100 %)
0 diff
(100 %id)
EC526008 Prostate .c 2079 to 2186 1 to 104       104/104
(100 %)
10 diff
(90.4 %id)
DA495241 brain .b 725 to 1052 194 to 522   capped   329/521
(63 %)
10 diff
(98.1 %id)
DA533187 brain .a-u 412 to 987 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BP396905 pancreatic islet .c 1791 to 2152 1 to 362     Submitted on the opposite strand 362/364
(99 %)
1 diff
(99.8 %id)
BP245852 Kidney .a-u 371 to 968 1 to 598       598/598
(100 %)
2 diff
(99.7 %id)
AA679741   .a-u 3048 to 3362 315 to 1   tiling clone,   315/315
(100 %)
0 diff
(100 %id)
AI792302   .a-u 512 to 1225 1 to 714       714/714
(100 %)
17 diff
(97.7 %id)
AI313045 adenocarcinoma, breast .c 1942 to 2149 11 to 218   AAA Submitted on the opposite strand 208/218
(95 %)
6 diff
(97.3 %id)
AI309080 adenocarcinoma, breast .c 1942 to 2149 22 to 229   AAA Submitted on the opposite strand 208/229
(90 %)
6 diff
(97.4 %id)
AI377272 pooled .c 2409 to 2757 355 to 7   tiling clone,   349/355
(98 %)
0 diff
(100 %id)
BE019467 muscle, rhabdomyosarcoma .a-u 46 to 542 1 to 497   tiling clone,   497/501
(99 %)
1 diff
(99.9 %id)
BE253084 eye, retinoblastoma .a-u 718 to 1334 1 to 617       617/618
(99 %)
13 diff
(97.9 %id)
BE294700 muscle, rhabdomyosarcoma .a-u 53 to 560 1 to 508       508/509
(99 %)
3 diff
(99.5 %id)
BG394461 eye, retinoblastoma .a-u 697 to 1462 1 to 760       760/816
(93 %)
19 diff
(97.7 %id)
BM480315 duodenal adenocarcinoma, cell line, small intestine .b 281 to 1298 31 to 1047   tiling clone,   1017/1066
(95 %)
6 diff
(99.5 %id)
BC040617 Ovary, pooled from 3 adults .c 15 to 2145 1 to 2131 V250I tiling clone, available from MGC, AAA   2131/2131
(100 %)
5 diff
(99.8 %id)
BM546966 ovary (pool of 3) .c 9 to 960 1 to 959   available from MGC,   959/1029
(93 %)
33 diff
(96.8 %id)
CA777857 Pancreas, Purified pancreatic islet .c 2269 to 2703 435 to 1   tiling clone, fully sequenced,   435/435
(100 %)
2 diff
(99.6 %id)
CA778121 Pancreas, Purified pancreatic islet .c 1715 to 2299 1 to 585   tiling clone, fully sequenced,   585/585
(100 %)
3 diff
(99.5 %id)
BQ711583 Spleen .a-u 2 to 874 1 to 878       878/941
(93 %)
29 diff
(97.0 %id)
CB112941 Liver .b 796 to 1352 1 to 557   tiling clone,   557/557
(100 %)
5 diff
(99.2 %id)
NM_000525.3   .a-u 1 to 3418 1 to 3418 exact RefSeq,   3418/3418
(100 %)
3 diff
(100.0 %id)
NM_001166290.1   .c 1 to 2763 1 to 2763 exact RefSeq,   2763/2763
(100 %)
3 diff
(99.9 %id)
DC392804 breast, tumor tissue .c 1 to 497 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
DN993190 brain, whole brain .a-u 555 to 765 1 to 211       211/211
(100 %)
5 diff
(97.7 %id)
BM676395 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 2168 to 2752 603 to 19   AAA   585/585
(100 %)
1 diff
(99.9 %id)
BM713280 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1358 to 1775 1 to 418   tiling clone,   418/418
(100 %)
1 diff
(99.8 %id)
BU738791 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 2296 to 2752 475 to 19   AAA   457/457
(100 %)
1 diff
(99.8 %id)
BQ917358 sciatic nerve .c 1715 to 2299 1 to 585   tiling clone, This clone was ignored 585/585
(100 %)
3 diff
(99.5 %id)
BQ711583 Spleen .a-u 2 to 874 1 to 878       878/941
(93 %)
29 diff
(97.0 %id)
CB112941 Liver .b 796 to 1352 1 to 557   tiling clone,   557/557
(100 %)
5 diff
(99.2 %id)
NM_000525.3   .a-u 1 to 3418 1 to 3418 exact RefSeq,   3418/3418
(100 %)
3 diff
(100.0 %id)
NM_001166290.1   .c 1 to 2763 1 to 2763 exact RefSeq,   2763/2763
(100 %)
3 diff
(99.9 %id)
DC392804 breast, tumor tissue .c 1 to 497 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
DN993190 brain, whole brain .a-u 555 to 765 1 to 211       211/211
(100 %)
5 diff
(97.7 %id)
DN993190 brain, whole brain .a-u 555 to 765 1 to 211       211/211
(100 %)
5 diff
(97.7 %id)
BM676395 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 2168 to 2752 603 to 19   AAA   585/585
(100 %)
1 diff
(99.9 %id)
BM676395 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 2168 to 2752 603 to 19   AAA   585/585
(100 %)
1 diff
(99.9 %id)
BM713280 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1358 to 1775 1 to 418   tiling clone,   418/418
(100 %)
1 diff
(99.8 %id)
BM713280 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1358 to 1775 1 to 418   tiling clone,   418/418
(100 %)
1 diff
(99.8 %id)
BU738791 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 2296 to 2752 475 to 19   AAA   457/457
(100 %)
1 diff
(99.8 %id)
BU738791 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 2296 to 2752 475 to 19   AAA   457/457
(100 %)
1 diff
(99.8 %id)
? Gene Summary Gene on genome mRNA:.a-u, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI