cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AF110315 | teratocarcinoma | .b | 1 to 2268 | 8 to 2275 | L247S | tiling clone, | 2268/2290 (99 %) | 4 diff (99.9 %id) | |
AK022619 | .a | 2085 to 4105 | 1 to 2021 | tiling clone, available from FLJ, | 2021/2021 (100 %) | 5 diff (99.8 %id) | |||
DV080717 | pooled | .a | 264 to 925 | 1 to 662 | tiling clone, | 662/664 (99 %) | 9 diff (98.7 %id) | ||
DV080718 | pooled | .a | 478 to 1129 | 652 to 1 | tiling clone, | Submitted on the opposite strand | 652/654 (99 %) | 7 diff (99.0 %id) | |
EG328194 | pooled | .a | 80 to 484 | 1 to 404 | 404/404 (100 %) | 4 diff (99.1 %id) | |||
EG328195 | pooled | .a | 32 to 443 | 412 to 1 | tiling clone, | Submitted on the opposite strand | 412/469 (87 %) | 2 diff (99.6 %id) | |
CX760803 | Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass | .c | 1 to 698 | 30 to 724 | W113X P120L W121X P130T G131X ... | tiling clone, | Submitted on the opposite strand | 695/801 (86 %) | 3 diff (99.7 %id) |
NM_001145095.1 | .a | 1 to 4105 | 1 to 4105 | exact | RefSeq, | 4105/4105 (100 %) | 0 diff (100 %id) | ||
AU124948 | .a | 2086 to 2881 | 2 to 795 | capped | 794/798 (99 %) | 4 diff (99.5 %id) | |||
AU148706 | .a | 3649 to 4105 | 457 to 1 | 457/457 (100 %) | 0 diff (100 %id) | ||||
TI_985974676 | .a | 559 to 1163 | 614 to 9 | tiling clone, fully sequenced, | 606/614 (98 %) | 3 diff (99.6 %id) | |||
TI_985974677 | .a | 238 to 1172 | 13 to 942 | tiling clone, fully sequenced, AAA | 930/942 (98 %) | 24 diff (97.5 %id) | |||
Z14310. matches multiple genes | .a | 238 to 1172 | 13 to 942 | tiling clone, | This clone was ignored, also hits gene OC90 | 930/942 (98 %) | 24 diff (97.5 %id) | ||
Z14310. matches multiple genes | Gene OC90, variant not shown | This clone was ignored, also hits gene OC90 |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes DC |