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Gene GJB6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
132 supporting clones for gene GJB6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BP194461 brain .e 284 to 866 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP194998 brain .e 301 to 882 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AK075247 thyroid gland .d 366 to 2335 1 to 1970 exact tiling clone, available from FLJ,   1970/1970
(100 %)
3 diff
(99.9 %id)
AK289592 alzheimer cortex .e 253 to 1391 1 to 1139 exact     1139/1139
(100 %)
0 diff
(100 %id)
AK312352 alzheimer cortex .e 295 to 1339 1 to 1047 T192I N230K H231S N233Q H234S ...     1047/1047
(100 %)
4 diff
(99.7 %id)
AW390135 stomach .f 1263 to 1777 513 to 1       513/514
(99 %)
24 diff
(95.4 %id)
AW860458 colon .d 531 to 805 12 to 286       275/286
(96 %)
6 diff
(98.0 %id)
AY297110 corpus callosum .f 388 to 1173 1 to 786       786/786
(100 %)
0 diff
(100 %id)
AY789474   .f 163 to 505 1 to 343       343/343
(100 %)
2 diff
(99.5 %id)
AY789475 hair follicle .a 163 to 630 1 to 468       468/468
(100 %)
2 diff
(99.6 %id)
AY789476 hair follicle .k 1 to 537 1 to 537 exact tiling clone,   537/537
(100 %)
2 diff
(99.7 %id)
BC038934 Brain, adult, 6 pooled whole brains .e 306 to 2071 1 to 1766 exact tiling clone, available from MGC, AAA   1766/1766
(100 %)
1 diff
(100.0 %id)
BE149306 head_neck .d 498 to 814 1 to 319       319/328
(97 %)
12 diff
(96.4 %id)
BE149572 head_neck .f 385 to 909 15 to 539       525/559
(93 %)
2 diff
(99.7 %id)
BE149762 head_neck .f 388 to 909 40 to 560       521/567
(91 %)
2 diff
(99.7 %id)
BE181310 head_neck .f 1195 to 1616 1 to 422       422/422
(100 %)
3 diff
(99.3 %id)
BE181335 head_neck .f 1200 to 1486 1 to 287       287/287
(100 %)
3 diff
(99.0 %id)
BE185135 head_neck .f 1312 to 1679 10 to 377       368/377
(97 %)
6 diff
(98.5 %id)
BE185192 head_neck .f 1263 to 1642 381 to 2     Submitted on the opposite strand 380/396
(95 %)
0 diff
(100 %id)
BE185488 head_neck .f 1402 to 1800 409 to 11     Submitted on the opposite strand 399/409
(97 %)
0 diff
(100 %id)
BE706463 head_neck .f 736 to 827 101 to 11       91/103
(88 %)
0 diff
(100 %id)
BE710647 head_neck .f 712 to 876 24 to 186       163/186
(87 %)
9 diff
(95.2 %id)
BE714716 head_neck .f 1478 to 1800 10 to 331       322/345
(93 %)
10 diff
(97.2 %id)
BE714754 head_neck .f 1478 to 1786 10 to 318       309/327
(94 %)
6 diff
(98.2 %id)
BF096149 uterus_tumor .f 1478 to 1800 10 to 329       320/337
(94 %)
11 diff
(96.8 %id)
BF096154 uterus_tumor .f 1489 to 1800 314 to 4       311/323
(96 %)
0 diff
(100 %id)
BG946123 bladder_tumor .h-u 1 to 562 565 to 7 N14S tiling clone,   559/569
(98 %)
0 diff
(100 %id)
BQ353859 head_neck .f 795 to 1069 283 to 3       281/297
(94 %)
0 diff
(100 %id)
BQ358800 head_neck .a 268 to 550 13 to 295       283/297
(95 %)
13 diff
(95.7 %id)
DC302269 cerebellum .e 254 to 776 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
DA066003 cerebellum .g 83 to 642 2 to 561 exact tiling clone, capped   560/561
(99 %)
1 diff
(99.9 %id)
DC303644 cerebellum .e 257 to 822 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC304252 cerebellum .e 256 to 831 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DA076384 cerebellum .e 305 to 876 8 to 579   capped   572/572
(100 %)
0 diff
(100 %id)
DC311036 alzheimer cortex .e 284 to 842 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC311271 alzheimer cortex .e 284 to 833 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC311360 alzheimer cortex .e 256 to 796 1 to 541       541/541
(100 %)
0 diff
(100 %id)
DC311464 alzheimer cortex .e 273 to 823 1 to 552       552/552
(100 %)
4 diff
(99.3 %id)
DC311529 alzheimer cortex .e 253 to 780 1 to 528       528/528
(100 %)
0 diff
(100 %id)
DC311623 alzheimer cortex .e 284 to 844 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DC311739 alzheimer cortex .e 284 to 827 1 to 543       543/543
(100 %)
2 diff
(99.7 %id)
DC311812 alzheimer cortex .e 256 to 773 1 to 518       518/518
(100 %)
0 diff
(100 %id)
DA136206 alzheimer cortex .f 182 to 816 2 to 636   capped   635/635
(100 %)
0 diff
(100 %id)
DC312063 alzheimer cortex .f 169 to 731 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DC312081 alzheimer cortex .e 256 to 805 1 to 550       550/550
(100 %)
1 diff
(99.9 %id)
DC312092 alzheimer cortex .e 294 to 837 1 to 545       545/545
(100 %)
2 diff
(99.7 %id)
DC312131 alzheimer cortex .e 256 to 826 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC312137 alzheimer cortex .e 272 to 816 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
DC312151 alzheimer cortex .e 284 to 806 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
DA138901 alzheimer cortex .d 623 to 1163 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DC312318 alzheimer cortex .e 284 to 817 1 to 534       534/534
(100 %)
1 diff
(99.9 %id)
DC312543 alzheimer cortex .e 284 to 917 1 to 634       634/634
(100 %)
0 diff
(100 %id)
DC312557 alzheimer cortex .e 284 to 843 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
DC312661 alzheimer cortex .e 256 to 807 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC312770 alzheimer cortex .e 295 to 862 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
DC313183 amygdala .e 260 to 713 1 to 454       454/454
(100 %)
1 diff
(99.8 %id)
DC314812 amygdala .e 260 to 789 1 to 530       530/530
(100 %)
0 diff
(100 %id)
DA165219 amygdala .d 281 to 670 2 to 391   capped   390/390
(100 %)
0 diff
(100 %id)
DC316824 amygdala .a 162 to 742 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC319144 brain .e 110 to 675 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC319458 brain .e 284 to 774 1 to 491       491/491
(100 %)
0 diff
(100 %id)
DC319507 brain .e 256 to 840 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DC320391 brain .e 260 to 825 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC326052 caudate nucleus .e 254 to 807 1 to 554       554/554
(100 %)
1 diff
(99.9 %id)
DC326091 caudate nucleus .e 284 to 759 1 to 476       476/476
(100 %)
0 diff
(100 %id)
DC326618 caudate nucleus .e 256 to 814 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC327007 caudate nucleus .e 284 to 838 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC336327 substantia nigra .e 273 to 765 1 to 493       493/493
(100 %)
0 diff
(100 %id)
DC337465 substantia nigra .e 1 to 570 1 to 570   tiling clone,   570/570
(100 %)
0 diff
(100 %id)
DC338101 subthalamic nucleus .e 284 to 848 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC338395 subthalamic nucleus .e 260 to 831 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC338494 subthalamic nucleus .e 284 to 847 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC338677 subthalamic nucleus .e 224 to 793 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC338848 subthalamic nucleus .j 1 to 555 1 to 555 exact tiling clone,   555/555
(100 %)
0 diff
(100 %id)
DC338983 subthalamic nucleus .e 295 to 591 1 to 298       298/298
(100 %)
1 diff
(99.7 %id)
DC339387 subthalamic nucleus .e 284 to 836 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BX109705 adenocarcinoma, Pancreas .f 1452 to 1897 460 to 15   AAA   446/446
(100 %)
0 diff
(100 %id)
BX435107 brain, fetal brain .f 1069 to 1894 826 to 1       826/910
(90 %)
39 diff
(95.8 %id)
BX441414 brain, fetal brain .a 84 to 859 26 to 801   tiling clone,   776/801
(96 %)
5 diff
(99.4 %id)
CV030650 mixed .f 388 to 1111 1 to 719       719/722
(99 %)
9 diff
(98.8 %id)
BP226496   .e 284 to 865 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP227986   .f 79 to 662 1 to 584   tiling clone,   584/584
(100 %)
0 diff
(100 %id)
BP228254   .e 284 to 854 1 to 571       571/580
(98 %)
15 diff
(97.5 %id)
BP228391   .a 208 to 792 1 to 585       585/585
(100 %)
3 diff
(99.5 %id)
DT215445 brain .f 931 to 1682 1 to 752       752/752
(100 %)
2 diff
(99.8 %id)
DC352702 brain .a 169 to 633 1 to 466       466/466
(100 %)
1 diff
(99.8 %id)
DA517203 brain .a 170 to 495 2 to 328   capped   327/332
(98 %)
3 diff
(99.1 %id)
DC353451 brain .i 1 to 572 1 to 572 exact tiling clone,   572/572
(100 %)
1 diff
(99.9 %id)
DC353506 brain .e 284 to 789 1 to 506       506/506
(100 %)
0 diff
(100 %id)
DB506589 hypothalamus .d 378 to 851 1 to 474       474/474
(100 %)
1 diff
(99.8 %id)
DB577868 hypothalamus .f 1428 to 1902 1 to 475     Submitted on the opposite strand 475/475
(100 %)
0 diff
(100 %id)
DA570734 whole embryo, mainly head .f 1609 to 1897 2 to 290   fully sequenced, capped, AAA   289/289
(100 %)
1 diff
(99.7 %id)
DB357528 whole embryo, mainly head .f 1771 to 1897 127 to 1   fully sequenced,   127/127
(100 %)
1 diff
(99.3 %id)
N64339 cochlea, ear .f 1603 to 1906 310 to 5   tiling clone,   306/310
(98 %)
0 diff
(100 %id)
AI569513 serous papillary carcinoma, high grade, 2pooled tumors, uterus .f 1653 to 1904 253 to 2   tiling clone,   252/253
(99 %)
0 diff
(100 %id)
AI694073 adenocarcinoma, Pancreas .f 1457 to 1899 443 to 2       442/443
(99 %)
0 diff
(100 %id)
BG286709 bladder, transitional cell papilloma, cell line .f 1026 to 1699 1 to 675   AAA   675/1195
(56 %)
8 diff
(99.4 %id)
BG678911 skin, squamous cell carcinoma .f 493 to 1223 1 to 731   tiling clone,   731/732
(99 %)
1 diff
(99.9 %id)
BG682360 skin, squamous cell carcinoma .f 776 to 1593 1 to 816       816/816
(100 %)
10 diff
(98.8 %id)
BI753411 brain .e 306 to 1065 1 to 760       760/761
(99 %)
2 diff
(99.8 %id)
BM549069 astrocytoma grade IV, cell line, brain .a 95 to 817 1 to 737       737/1203
(61 %)
16 diff
(98.7 %id)
BM910179 astrocytoma grade IV, cell line, brain .a 96 to 753 1 to 661       661/1170
(56 %)
13 diff
(98.9 %id)
BM045089 carcinoma, cell line, Prostate .g 139 to 520 1 to 380       380/380
(100 %)
6 diff
(98.5 %id)
BM927223 brain .f 84 to 901 17 to 836       820/1074
(76 %)
25 diff
(97.7 %id)
CF453597 peripheral nervous system .f 1023 to 1785 25 to 787   tiling clone,   763/787
(96 %)
6 diff
(99.3 %id)
TI_57218042   .e 306 to 1065 30 to 789       760/790
(96 %)
8 diff
(99.0 %id)
NM_006783.4   .e 1 to 2071 1 to 2071 exact RefSeq, AAA   2071/2071
(100 %)
0 diff
(100 %id)
NM_001110219.2   .d 198 to 2336 1 to 2139 exact RefSeq, AAA   2139/2139
(100 %)
0 diff
(100 %id)
NM_001110220.2   .a 1 to 2029 1 to 2029 exact RefSeq, AAA   2029/2029
(100 %)
0 diff
(100 %id)
NM_001110221.2   .f 1 to 1905 1 to 1905 exact RefSeq, AAA   1905/1905
(100 %)
0 diff
(100 %id)
BP307376 brain .e 284 to 862 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BP309452 brain .e 256 to 835 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DC373270 tongue .a 83 to 603 1 to 520       520/520
(100 %)
1 diff
(99.9 %id)
CV570379 cornea, eye .f 1090 to 1704 1 to 615       615/615
(100 %)
1 diff
(99.9 %id)
CV570590 cornea, eye .g 1 to 532 1 to 532   tiling clone,   532/532
(100 %)
0 diff
(100 %id)
CV571132 cornea, eye .d 545 to 1169 1 to 625       625/625
(100 %)
0 diff
(100 %id)
CV575215 cornea, eye .a 243 to 835 1 to 593       593/593
(100 %)
0 diff
(100 %id)
CV575256 cornea, eye .h-u 118 to 609 1 to 492   tiling clone,   492/492
(100 %)
0 diff
(100 %id)
CV575718 cornea, eye .a 93 to 714 1 to 621   tiling clone,   621/621
(100 %)
1 diff
(99.9 %id)
TI_1948090508   .f 388 to 737 127 to 476       350/378
(92 %)
10 diff
(97.4 %id)
TI_1948090586   .f 382 to 767 119 to 505       387/409
(94 %)
6 diff
(98.6 %id)
TI_1948090685   .f 388 to 777 130 to 519       390/419
(93 %)
6 diff
(98.6 %id)
DC295086 synovial membrane tissue from rheumatioidarthritis .a 79 to 537 1 to 460   tiling clone,   460/460
(100 %)
1 diff
(99.8 %id)
DA981723 synovial membrane tissue from rheumatioidarthritis .d 1 to 278 2 to 280   tiling clone, capped   279/279
(100 %)
1 diff
(99.7 %id)
DB334878 synovial membrane tissue from rheumatioidarthritis .d 1784 to 2328 545 to 1   tiling clone,   545/545
(100 %)
1 diff
(99.9 %id)
DC295663 synovial membrane tissue from rheumatioidarthritis .d 276 to 839 1 to 565   tiling clone,   565/565
(100 %)
1 diff
(99.9 %id)
DC295753 synovial membrane tissue from rheumatioidarthritis .a 83 to 591 1 to 509       509/509
(100 %)
1 diff
(99.9 %id)
DN998505 bone marrow .d 196 to 920 1 to 725   tiling clone,   725/725
(100 %)
3 diff
(99.6 %id)
DN992553 brain, whole brain .e 304 to 594 202 to 492       291/492
(59 %)
7 diff
(98.6 %id)
DC396278 testis .b 1 to 585 1 to 585 exact tiling clone,   585/585
(100 %)
2 diff
(99.7 %id)
DB166087 thyroid gland .d 367 to 1084 2 to 719   capped   718/720
(99 %)
5 diff
(99.4 %id)
DB382021 thyroid gland .d 1820 to 2335 515 to 1       515/544
(94 %)
14 diff
(97.5 %id)
DC420777 uterus .c 1 to 564 6 to 570 exact tiling clone,   570/570
(100 %)
1 diff
(99.9 %id)
CB985877 Pooled-Glandular .h-u 118 to 609 1 to 492   tiling clone, Suspected internal deletion, this clone was ignored 492/492
(100 %)
0 diff
(100 %id)
DB066203 testis .h-u 118 to 609 1 to 492   tiling clone, capped This clone was ignored 492/492
(100 %)
0 diff
(100 %id)
DB339720 testis .a 93 to 714 1 to 621   tiling clone, This clone was ignored 621/621
(100 %)
1 diff
(99.9 %id)
CV575718 cornea, eye .a 93 to 714 1 to 621   tiling clone,   621/621
(100 %)
1 diff
(99.9 %id)
TI_1948090508   .f 388 to 737 127 to 476       350/378
(92 %)
10 diff
(97.4 %id)
TI_1948090586   .f 382 to 767 119 to 505       387/409
(94 %)
6 diff
(98.6 %id)
TI_1948090685   .f 388 to 777 130 to 519       390/419
(93 %)
6 diff
(98.6 %id)
DC295086 synovial membrane tissue from rheumatioidarthritis .a 79 to 537 1 to 460   tiling clone,   460/460
(100 %)
1 diff
(99.8 %id)
DA981723 synovial membrane tissue from rheumatioidarthritis .d 1 to 278 2 to 280   tiling clone, capped   279/279
(100 %)
1 diff
(99.7 %id)
DB334878 synovial membrane tissue from rheumatioidarthritis .d 1784 to 2328 545 to 1   tiling clone,   545/545
(100 %)
1 diff
(99.9 %id)
DC295663 synovial membrane tissue from rheumatioidarthritis .d 276 to 839 1 to 565   tiling clone,   565/565
(100 %)
1 diff
(99.9 %id)
DC295753 synovial membrane tissue from rheumatioidarthritis .a 83 to 591 1 to 509       509/509
(100 %)
1 diff
(99.9 %id)
DN998505 bone marrow .d 196 to 920 1 to 725   tiling clone,   725/725
(100 %)
3 diff
(99.6 %id)
DN992553 brain, whole brain .e 304 to 594 202 to 492       291/492
(59 %)
7 diff
(98.6 %id)
DN992553 brain, whole brain .e 304 to 594 202 to 492       291/492
(59 %)
7 diff
(98.6 %id)
DC396278 testis .b 1 to 585 1 to 585 exact tiling clone,   585/585
(100 %)
2 diff
(99.7 %id)
DB166087 thyroid gland .d 367 to 1084 2 to 719   capped   718/720
(99 %)
5 diff
(99.4 %id)
DB382021 thyroid gland .d 1820 to 2335 515 to 1       515/544
(94 %)
14 diff
(97.5 %id)
DC420777 uterus .c 1 to 564 6 to 570 exact tiling clone,   570/570
(100 %)
1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI