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Gene CCNYL1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
187 supporting clones for gene CCNYL1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
C16861   .c 3149 to 3564 1 to 419       419/419
(100 %)
4 diff
(99.1 %id)
AA813500   .c 3388 to 3642 256 to 1       256/257
(99 %)
8 diff
(96.9 %id)
AA091782   .c 2155 to 2410 1 to 250       250/250
(100 %)
11 diff
(95.6 %id)
AA095924   .c 2908 to 3218 1 to 299       299/326
(91 %)
17 diff
(94.8 %id)
AA333446 Embryo, 8 weeks .c 1636 to 1797 1 to 162       162/162
(100 %)
0 diff
(100 %id)
AA345130 gall bladder .c 2895 to 3159 1 to 265       265/265
(100 %)
0 diff
(100 %id)
AA382892 testis .c 1958 to 2089 132 to 1       132/132
(100 %)
0 diff
(100 %id)
AK026922 colon .c 2048 to 3780 1 to 1733   tiling clone, available from FLJ, AAA   1733/1733
(100 %)
9 diff
(99.5 %id)
AK095479   .d 561 to 2699 1 to 2139   tiling clone, available from FLJ,   2139/2139
(100 %)
6 diff
(99.8 %id)
AK097751 testis .d 1 to 1951 2 to 1953 exact tiling clone, available from FLJ,   1953/1953
(100 %)
1 diff
(100.0 %id)
AW952522   .c 1645 to 2098 1 to 462       462/515
(89 %)
14 diff
(97.3 %id)
AW958216   .c 3462 to 3780 1 to 319   AAA   319/319
(100 %)
0 diff
(100 %id)
AW961734   .c 2604 to 3100 1 to 497       497/497
(100 %)
10 diff
(98.0 %id)
BC067253 Uterus, leiomyosarcoma .c 236 to 2854 1 to 2617 V47G V48G E49A P50C A51R ... tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 2617/2617
(100 %)
9 diff
(99.7 %id)
BE812334 amnion_normal .f 1 to 559 1 to 559 exact tiling clone,   559/559
(100 %)
1 diff
(99.9 %id)
BE834335 ovary .c 1521 to 1900 1 to 382       382/386
(98 %)
13 diff
(96.7 %id)
BE938705 testis_normal .c 920 to 1439 515 to 1       515/515
(100 %)
11 diff
(97.9 %id)
BF326702 breast_normal .c 2975 to 3315 1 to 342       342/359
(95 %)
16 diff
(95.6 %id)
BF767077 colon_normal .c 4003 to 4441 1 to 436       436/436
(100 %)
11 diff
(97.5 %id)
BF818623 colon_ins .d 351 to 568 29 to 246       218/246
(88 %)
7 diff
(97.2 %id)
BI016737 lung_tumor .c 1333 to 1743 32 to 441       410/441
(92 %)
6 diff
(98.7 %id)
DA043723 bladder .a 133 to 669 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA161839 amygdala .h-u 1 to 518 2 to 520 V6R M7H P9T S10F S11I ... tiling clone, capped   519/519
(100 %)
4 diff
(99.3 %id)
BX117451 whole brain .c 3295 to 3780 502 to 15   AAA   488/489
(99 %)
2 diff
(99.6 %id)
BX280895 brain, medulla .c 941 to 1467 1 to 527       527/527
(100 %)
0 diff
(100 %id)
F10719 brain, total brain .c 3465 to 3780 316 to 1       316/316
(100 %)
1 diff
(99.7 %id)
BP205569 coronary artery .c 1734 to 2271 1 to 538       538/584
(92 %)
11 diff
(98.2 %id)
BP206801 coronary artery .c 1616 to 2197 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CN266321 embryonic stem cells, cell lines H1, H7, andH9 .c 434 to 571 12 to 147       136/147
(92 %)
6 diff
(96.0 %id)
CN342913 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g 128 to 709 1 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
CN342914 embryonic stem cells, cell lines H1, H7, andH9 .g 1 to 693 1 to 693 N12T P13L S14L D15T H16I ... tiling clone,   693/693
(100 %)
4 diff
(99.5 %id)
CN342915 embryonic stem cells, cell lines H1, H7, andH9 .b 209 to 905 1 to 697   tiling clone,   697/697
(100 %)
0 diff
(100 %id)
CN342916 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 262 to 707 1 to 446       446/446
(100 %)
2 diff
(99.6 %id)
CN342917 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 433 to 1059 1 to 627       627/627
(100 %)
2 diff
(99.7 %id)
CR739338 parathyroid gland, parathyroid tumor .c 2140 to 2391 1 to 253       253/255
(99 %)
6 diff
(97.7 %id)
CR745372   .c 2947 to 3249 1 to 303       303/303
(100 %)
0 diff
(100 %id)
DA474162   .d 562 to 1137 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
AL693123   .h-u 49 to 591 10 to 552 exact tiling clone,   543/543
(100 %)
1 diff
(99.9 %id)
BX478963   .c 2996 to 3614 1 to 619       619/619
(100 %)
4 diff
(99.4 %id)
EH344272   .c 1590 to 1670 1 to 80       80/80
(100 %)
1 diff
(98.8 %id)
D78739 placenta .c 3149 to 3486 1 to 343       343/343
(100 %)
9 diff
(97.4 %id)
DB455765 testis .c 1 to 261 2 to 262       262/262
(100 %)
1 diff
(99.7 %id)
DB521197 testis .c 1659 to 2089 1 to 432     Submitted on the opposite strand 432/432
(100 %)
1 diff
(99.8 %id)
DB528023 testis .c 1590 to 2073 1 to 484     Submitted on the opposite strand 484/484
(100 %)
0 diff
(100 %id)
DA553140   .d 563 to 1113 2 to 553   capped   550/552
(99 %)
1 diff
(99.9 %id)
BP264096 small intestine .c 960 to 1509 1 to 550       550/550
(100 %)
5 diff
(99.1 %id)
DA597712   .d 570 to 1128 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA599258   .c 730 to 1303 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
CN482952 eye .a 10 to 628 1 to 619       619/619
(100 %)
5 diff
(99.2 %id)
H15884 whole brain .c 2529 to 2988 66 to 530       465/530
(87 %)
6 diff
(98.9 %id)
H29597 whole brain .c 3300 to 3784 504 to 6       499/506
(98 %)
0 diff
(100 %id)
H29683 whole brain .c 2572 to 2943 1 to 382       382/407
(93 %)
14 diff
(96.6 %id)
H38119 eye, retina .c 1512 to 1881 14 to 390     Submitted on the opposite strand 377/456
(82 %)
6 diff
(98.7 %id)
H67945 liver and spleen .c 2766 to 3111 1 to 351       351/354
(99 %)
12 diff
(96.7 %id)
N51608 multiple sclerosis lesions .c 1773 to 2076 309 to 1       309/312
(99 %)
5 diff
(98.4 %id)
N53903 multiple sclerosis lesions .c 1089 to 1385 1 to 298       298/301
(99 %)
2 diff
(99.4 %id)
N90447 parathyroid gland, parathyroid tumor .c 3519 to 3782 264 to 1       264/267
(98 %)
0 diff
(100 %id)
W74172 Pancreas, pancreatic islet .c 2530 to 2936 1 to 411       411/413
(99 %)
9 diff
(97.9 %id)
AA015602 eye, retina .c 2601 to 2975 380 to 1     Submitted on the opposite strand 380/472
(80 %)
10 diff
(97.9 %id)
AA015603 eye, retina .c 1500 to 1795 1 to 298     Submitted on the opposite strand 298/432
(68 %)
3 diff
(99.4 %id)
W86537 liver and spleen .i 1 to 456 459 to 3 S31* tiling clone, Submitted on the opposite strand 457/460
(99 %)
0 diff
(100 %id)
W86630 liver and spleen .c 1490 to 1952 1 to 468     Submitted on the opposite strand 468/469
(99 %)
6 diff
(98.8 %id)
AA194719 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 3330 to 3780 453 to 1   fully sequenced,   453/453
(100 %)
3 diff
(99.4 %id)
AA195560 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 2969 to 3360 1 to 393   fully sequenced,   393/393
(100 %)
3 diff
(99.3 %id)
AA416724   .c 1677 to 2091 418 to 3       416/418
(99 %)
0 diff
(100 %id)
AA416803   .c 1089 to 1493 1 to 407       407/407
(100 %)
4 diff
(99.1 %id)
AA478380 ovarian tumor, ovary .c 3427 to 3776 350 to 1       350/350
(100 %)
0 diff
(100 %id)
AA629680 lung, lung carcinoma .c 1617 to 1968 352 to 1       352/352
(100 %)
0 diff
(100 %id)
AA551049 Schwannoma tumor .c 3387 to 3741 355 to 1       355/355
(100 %)
0 diff
(100 %id)
AA779541   .c 1783 to 2095 315 to 2       314/315
(99 %)
0 diff
(100 %id)
AA731590 germinal center B cell .c 2392 to 2832 441 to 1   tiling clone,   441/441
(100 %)
1 diff
(99.8 %id)
AA846223 parathyroid gland, parathyroid tumor .c 3613 to 3784 174 to 3       172/174
(98 %)
0 diff
(100 %id)
AA873367 2 pooled tumors (clear cell type), Kidney .c 3426 to 3783 358 to 1       358/358
(100 %)
0 diff
(100 %id)
AA903705 pooled germ cell tumors .c 1499 to 1647 12 to 160     Submitted on the opposite strand 149/160
(93 %)
6 diff
(96.3 %id)
AI014496 pooled .c 3307 to 3784 476 to 2       475/476
(99 %)
0 diff
(100 %id)
AI050814 Kidney .c 3348 to 3780 450 to 18   AAA   433/433
(100 %)
0 diff
(100 %id)
AI041031   .c 3277 to 3783 507 to 1       507/507
(100 %)
1 diff
(99.9 %id)
AI262000 adenocarcinoma, colon .c 3340 to 3784 449 to 5       445/449
(99 %)
0 diff
(100 %id)
AI306496 carcinoid, lung .c 3350 to 3784 435 to 1       435/440
(98 %)
0 diff
(100 %id)
AI302952 2 pooled tumors (clear cell type), Kidney .c 3627 to 3783 157 to 1       157/157
(100 %)
1 diff
(99.4 %id)
AI272986 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 1743 to 2091 349 to 1       349/350
(99 %)
0 diff
(100 %id)
AI862403 colon, colon tumor, RER+ .c 3237 to 3781 544 to 1       544/544
(100 %)
1 diff
(99.9 %id)
AI609753 brain, glioblastoma (pooled) .b 782 to 1383 602 to 1   tiling clone,   602/602
(100 %)
2 diff
(99.7 %id)
AI452728 pooled .c 3239 to 3781 543 to 1       543/543
(100 %)
1 diff
(99.9 %id)
AI681132 carcinoid, lung .c 3335 to 3780 467 to 21   AAA   447/447
(100 %)
16 diff
(96.5 %id)
AI681780 carcinoid, lung .c 3278 to 3784 517 to 1       517/517
(100 %)
19 diff
(96.4 %id)
AI627872 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .c 1705 to 2095 394 to 4       391/394
(99 %)
0 diff
(100 %id)
AI914625 pooled .c 2066 to 2363 1 to 300     Submitted on the opposite strand 300/300
(100 %)
8 diff
(97.4 %id)
AW043835 pooled .c 3236 to 3784 553 to 5       549/553
(99 %)
0 diff
(100 %id)
AW085622 esophagus, squamous cell carcinoma .c 1677 to 2090 431 to 18   AAA   414/414
(100 %)
5 diff
(98.8 %id)
AW130333 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 3277 to 3780 505 to 1       505/505
(100 %)
5 diff
(99.1 %id)
AW135279   .c 1645 to 2083 456 to 18   AAA   439/439
(100 %)
1 diff
(99.8 %id)
AW771419 colon, juvenile granulosa tumor .c 1499 to 1955 1 to 458     Submitted on the opposite strand 458/458
(100 %)
1 diff
(99.8 %id)
BU428889 lymph .a 219 to 656 1 to 438       438/438
(100 %)
3 diff
(99.4 %id)
BU430131 lymph .d 375 to 824 1 to 450       450/450
(100 %)
5 diff
(98.9 %id)
BF594533 colon, colon tumor, RER+ .c 3351 to 3781 431 to 1       431/431
(100 %)
0 diff
(100 %id)
BF594556 colon, colon tumor, RER+ .c 3259 to 3736 485 to 8       478/485
(98 %)
0 diff
(100 %id)
BE538673 cervix .c 2139 to 2885 1 to 741   tiling clone,   741/753
(98 %)
46 diff
(93.9 %id)
BE548488 cervical carcinoma cell line, cervix .c 1501 to 1665 163 to 1     Submitted on the opposite strand 163/163
(100 %)
2 diff
(98.8 %id)
BF223648 carcinoid, lung .c 1496 to 2009 1 to 514     Submitted on the opposite strand 514/514
(100 %)
3 diff
(99.5 %id)
BE897889 melanotic melanoma, skin .c 2687 to 3471 1 to 773       773/970
(79 %)
25 diff
(97.5 %id)
BF102603 adenocarcinoma, Prostate .c 2147 to 2837 1 to 677       677/824
(82 %)
42 diff
(95.0 %id)
BF381880 brain, primitive neuroectoderm .c 2623 to 3327 1 to 694       694/853
(81 %)
23 diff
(97.4 %id)
BF183911 bone marrow, from chronic myelogenous leukemia .c 2622 to 3220 1 to 605       605/733
(82 %)
25 diff
(96.6 %id)
BF102903 adenocarcinoma, Prostate .c 2147 to 2811 1 to 652       652/851
(76 %)
29 diff
(96.6 %id)
BF102731 adenocarcinoma, Prostate .c 2146 to 2631 1 to 509       509/930
(54 %)
35 diff
(96.3 %id)
BF240847 bone marrow, from acute myelogenous leukemia .c 3032 to 3592 1 to 560       560/560
(100 %)
12 diff
(97.9 %id)
BF215711 brain, glioblastoma .d 518 to 1177 1 to 658       658/874
(75 %)
35 diff
(96.0 %id)
BF216679 brain, glioblastoma .c 2421 to 3011 1 to 587       587/731
(80 %)
15 diff
(98.0 %id)
BF210713 bone marrow, from chronic myelogenous leukemia .c 2711 to 3212 1 to 511       511/828
(61 %)
11 diff
(98.7 %id)
BF669996 brain, primitive neuroectoderm .c 2144 to 2838 1 to 682       682/867
(78 %)
35 diff
(96.0 %id)
BF699679 brain, primitive neuroectoderm .c 2220 to 2918 1 to 699       699/868
(80 %)
34 diff
(96.1 %id)
BF697484 brain, primitive neuroectoderm .c 2462 to 3031 1 to 575       575/861
(66 %)
28 diff
(96.8 %id)
BG171114 hypernephroma, cell line, Kidney .c 1526 to 2235 1 to 704       704/755
(93 %)
15 diff
(98.1 %id)
BG771242 adenocarcinoma, Prostate .c 1896 to 2628 1 to 740       740/813
(91 %)
31 diff
(96.2 %id)
BG820284 anaplastic oligodendroglioma with 1p/19qloss, brain .c 4008 to 4590 598 to 1   tiling clone, Submitted on the opposite strand 598/777
(76 %)
16 diff
(98.0 %id)
BI830899 brain, medulla .c 941 to 1756 1 to 815       815/815
(100 %)
7 diff
(99.2 %id)
BI459948 testis .c 1 to 414 7 to 420   tiling clone,   420/421
(99 %)
5 diff
(98.9 %id)
BI860908 breast, mammary adenocarcinoma, cell line .c 1556 to 2075 1 to 520   AAA   520/520
(100 %)
5 diff
(99.1 %id)
BM460297 eye, retinoblastoma .c 3633 to 4442 1 to 811   tiling clone,   811/1039
(78 %)
8 diff
(99.3 %id)
BC047293 Uterus, leiomyosarcoma .e 16 to 966 1 to 951   tiling clone, available from MGC, AAA   951/951
(100 %)
0 diff
(100 %id)
BM454972 leiomyosarcoma, uterus .e 1 to 629 23 to 654 S2T Q3R T4P S5V Q6S ... available from MGC,   632/1295
(48 %)
20 diff
(98.5 %id)
BM803004 duodenal adenocarcinoma, cell line, small intestine .c 1730 to 2075 1 to 347   AAA   347/347
(100 %)
2 diff
(99.5 %id)
BQ020197 Chondrosarcoma, Left Pubic Bone .c 2246 to 2823 595 to 19   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 577/577
(100 %)
8 diff
(98.7 %id)
BQ016415 lung, Metastatic Chondrosarcoma .c 3105 to 3780 697 to 19   AAA   679/679
(100 %)
3 diff
(99.6 %id)
BQ219308 epithelioid carcinoma, Pancreas .c 1482 to 2045 564 to 1     Submitted on the opposite strand 564/578
(97 %)
1 diff
(99.9 %id)
BQ431086 melanotic melanoma, skin .c 2817 to 3467 1 to 661   tiling clone,   661/920
(71 %)
21 diff
(97.8 %id)
BU149234 sympathetic trunk .c 178 to 602 1 to 425   tiling clone, available from MGC,   425/1105
(38 %)
2 diff
(99.9 %id)
BQ921171 leiomyosarcoma, uterus .c 2474 to 3384 12 to 920       909/925
(98 %)
12 diff
(98.8 %id)
BQ961627 leiomyosarcoma, uterus .c 238 to 1024 1 to 793       793/908
(87 %)
28 diff
(97.0 %id)
BU567039 mixed (pool of 40 RNAs) .c 1836 to 2093 1 to 258       258/294
(87 %)
2 diff
(99.4 %id)
BU567925 testis .d 432 to 1074 4 to 645       642/827
(77 %)
20 diff
(97.6 %id)
CX165195 human embryonic stem cells differentiated toan early endodermal cell type .c 2070 to 2266 1 to 197       197/197
(100 %)
1 diff
(99.5 %id)
TI_57177393   .c 941 to 1756 65 to 879       815/879
(92 %)
10 diff
(98.9 %id)
TI_57192315   .c 1555 to 2076 50 to 582       533/1112
(47 %)
28 diff
(97.5 %id)
TI_57192402   .c 1555 to 2075 57 to 577   AAA   521/521
(100 %)
5 diff
(99.1 %id)
CB114407 Liver .c 1567 to 2236 668 to 1     Submitted on the opposite strand 668/668
(100 %)
1 diff
(99.9 %id)
CB158832 Liver .c 2119 to 2511 1 to 392       392/392
(100 %)
3 diff
(99.3 %id)
CB158848 Liver .c 2118 to 2528 1 to 409       409/409
(100 %)
3 diff
(99.3 %id)
BP428976   .c 2696 to 3086 1 to 391       391/391
(100 %)
2 diff
(99.5 %id)
BP430313   .c 2694 to 3078 1 to 385       385/385
(100 %)
4 diff
(99.0 %id)
DA650519   .c 1225 to 1768 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB321684   .c 3254 to 3780 527 to 1       527/527
(100 %)
0 diff
(100 %id)
NM_152523.2   .d 1 to 3656 2 to 3657 exact RefSeq, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 3657/3657
(100 %)
0 diff
(100 %id)
NM_001142300.1   .c 25 to 3780 1 to 3756 exact RefSeq, AAA   3756/3756
(100 %)
0 diff
(100 %id)
DB362744   .c 1499 to 2062 1 to 557     Submitted on the opposite strand 557/561
(99 %)
26 diff
(95.4 %id)
DA737368   .a 1 to 770 2 to 776   tiling clone, capped   775/851
(91 %)
8 diff
(99.1 %id)
DB369961   .a 3356 to 3806 451 to 1   tiling clone,   451/453
(99 %)
1 diff
(99.8 %id)
CT000112 T-Lymphocytes .b 1 to 923 1 to 924   tiling clone,   924/924
(100 %)
4 diff
(99.6 %id)
CR984569 T-Lymphocytes .c 135 to 540 1 to 406       406/407
(99 %)
1 diff
(99.8 %id)
BM772734 Ascites, stomach .c 1730 to 2411 683 to 1     Submitted on the opposite strand 683/683
(100 %)
2 diff
(99.8 %id)
BM844761 lymph node, stomach .c 2078 to 2456 1 to 378       378/378
(100 %)
12 diff
(96.9 %id)
T32758 heart .c 2603 to 2899 1 to 295       295/307
(96 %)
8 diff
(97.4 %id)
T35697 small intestine .c 3461 to 3780 320 to 1       320/321
(99 %)
0 diff
(100 %id)
T35698 small intestine .c 3461 to 3713 1 to 253       253/254
(99 %)
1 diff
(99.7 %id)
DN996802 breast cancer, Mammary gland (cancer tissue) .a 226 to 764 1 to 539   tiling clone,   539/539
(100 %)
5 diff
(99.1 %id)
DN992603 brain, whole brain .d 350 to 994 9 to 652       644/652
(98 %)
7 diff
(99.0 %id)
DB019314 esophageal, tumor tissue .c 1395 to 1961 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB029448 testis .c 1 to 240 2 to 242   capped   241/241
(100 %)
2 diff
(99.2 %id)
DB336895 testis .c 1535 to 2093 562 to 1       562/562
(100 %)
3 diff
(99.5 %id)
DB049823 testis .d 1 to 571 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
DB338486 testis .d 1389 to 1951 566 to 1       566/566
(100 %)
4 diff
(99.3 %id)
TI_149285929   .c 1310 to 2075 846 to 82   AAA   765/826
(92 %)
27 diff
(96.8 %id)
TI_154149776   .a 225 to 704 77 to 556       480/480
(100 %)
0 diff
(100 %id)
TI_154151402   .d 382 to 911 81 to 610       530/534
(99 %)
5 diff
(99.1 %id)
TI_157605543   .c 1571 to 2075 595 to 90   AAA   506/507
(99 %)
6 diff
(98.9 %id)
DB348367 trachea .c 1499 to 2029 1 to 531     Submitted on the opposite strand 531/531
(100 %)
1 diff
(99.9 %id)
BQ013802 placenta .c 2403 to 2991 602 to 14   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 589/602
(97 %)
2 diff
(99.7 %id)
CF529703 placenta .c 1663 to 2075 432 to 19   AAA   414/414
(100 %)
2 diff
(99.6 %id)
BM971772 lung .c 1544 to 2075 548 to 17   AAA   532/532
(100 %)
3 diff
(99.5 %id)
CA450191 Human Lung Epithelial cells, lung .c 1499 to 2006 19 to 527     Submitted on the opposite strand 509/536
(94 %)
11 diff
(98.0 %id)
BM669486 eye, fetal eyes .c 3264 to 3778 535 to 21   fully sequenced,   515/535
(96 %)
0 diff
(100 %id)
BM699271 eye, fetal eyes .c 2823 to 3294 1 to 472   fully sequenced,   472/472
(100 %)
0 diff
(100 %id)
CK300719 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1478 to 2073 616 to 21   AAA   596/606
(98 %)
0 diff
(100 %id)
BU617668 Bone, Subchondral Bone .c 3672 to 4320 9 to 657     Submitted on the opposite strand 649/657
(98 %)
9 diff
(98.7 %id)
CA420811 Bone, Enchondroma cell line .c 3116 to 3780 683 to 19   AAA   665/665
(100 %)
0 diff
(100 %id)
BU627624 Bone, Enchondroma cell line .c 3100 to 3780 699 to 19   AAA   681/681
(100 %)
0 diff
(100 %id)
TI_151734396   .c 1478 to 2075 676 to 79   AAA   598/956
(62 %)
0 diff
(100 %id)
DB256329 uterus .c 1863 to 2282 2 to 421   capped   420/420
(100 %)
3 diff
(99.3 %id)
Z20895   .c 1654 to 1779 1 to 126       126/126
(100 %)
2 diff
(98.5 %id)
AA329698   .c 2817 to 3467 1 to 661   tiling clone, This clone was ignored 661/920
(71 %)
21 diff
(97.8 %id)
AA344279 gall bladder .c 2817 to 3467 1 to 661   tiling clone,   661/920
(71 %)
21 diff
(97.8 %id)
T10006   .c 178 to 602 1 to 425   tiling clone, available from MGC, This clone was ignored 425/1105
(38 %)
2 diff
(99.9 %id)
T10007   .c 2474 to 3384 12 to 920     This clone was ignored 909/925
(98 %)
12 diff
(98.8 %id)
BF846690 lung_normal .c 2474 to 3384 12 to 920       909/925
(98 %)
12 diff
(98.8 %id)
BF846836 lung_normal .c 238 to 1024 1 to 793     Submitted on the opposite strand 793/908
(87 %)
28 diff
(97.0 %id)
BF846841 lung_normal .c 238 to 1024 1 to 793       793/908
(87 %)
28 diff
(97.0 %id)
DA188499 amygdala .c 1836 to 2093 1 to 258   capped   258/294
(87 %)
2 diff
(99.4 %id)
DB303263 amygdala .d 432 to 1074 4 to 645       642/827
(77 %)
20 diff
(97.6 %id)
DA227154 brain .c 2070 to 2266 1 to 197   capped This clone was ignored 197/197
(100 %)
1 diff
(99.5 %id)
DB305259 brain .c 941 to 1756 65 to 879     This clone was ignored 815/879
(92 %)
10 diff
(98.9 %id)
R38670 whole brain .c 1555 to 2076 50 to 582     This clone was ignored 533/1112
(47 %)
28 diff
(97.5 %id)
T75301 whole brain .c 1555 to 2075 57 to 577     This clone was ignored 521/521
(100 %)
5 diff
(99.1 %id)
AA026686 heart .c 1567 to 2236 668 to 1     Submitted on the opposite strand, submitted on the opposite strand 668/668
(100 %)
1 diff
(99.9 %id)
BF028196 bladder, carcinoma, cell line .c 2119 to 2511 1 to 392       392/392
(100 %)
3 diff
(99.3 %id)
CX755526 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 2118 to 2528 1 to 409     Submitted on the opposite strand, submitted on the opposite strand 409/409
(100 %)
3 diff
(99.3 %id)
CK429544 eye, lacrimal gland .c 2696 to 3086 1 to 391     Submitted on the opposite strand, submitted on the opposite strand 391/391
(100 %)
2 diff
(99.5 %id)
TI_149291428   .c 2694 to 3078 1 to 385   AAA This clone was ignored 385/385
(100 %)
4 diff
(99.0 %id)
DB210627 trachea .c 1225 to 1768 2 to 545   capped This clone was ignored 544/544
(100 %)
1 diff
(99.9 %id)
DB348755 trachea .c 3254 to 3780 527 to 1     This clone was ignored 527/527
(100 %)
0 diff
(100 %id)
BM974048 lung .d 1 to 3656 2 to 3657   RefSeq, AAA This clone was ignored 3657/3657
(100 %)
0 diff
(100 %id)
NM_001142300.1   .c 25 to 3780 1 to 3756 exact RefSeq, AAA   3756/3756
(100 %)
0 diff
(100 %id)
DB362744   .c 1499 to 2062 1 to 557     Submitted on the opposite strand 557/561
(99 %)
26 diff
(95.4 %id)
DA737368   .a 1 to 770 2 to 776   tiling clone, capped   775/851
(91 %)
8 diff
(99.1 %id)
DB369961   .a 3356 to 3806 451 to 1   tiling clone,   451/453
(99 %)
1 diff
(99.8 %id)
CT000112 T-Lymphocytes .b 1 to 923 1 to 924   tiling clone,   924/924
(100 %)
4 diff
(99.6 %id)
CR984569 T-Lymphocytes .c 135 to 540 1 to 406       406/407
(99 %)
1 diff
(99.8 %id)
BM772734 Ascites, stomach .c 1730 to 2411 683 to 1     Submitted on the opposite strand 683/683
(100 %)
2 diff
(99.8 %id)
BM772734 Ascites, stomach .c 1730 to 2411 683 to 1     Submitted on the opposite strand 683/683
(100 %)
2 diff
(99.8 %id)
BM844761 lymph node, stomach .c 2078 to 2456 1 to 378       378/378
(100 %)
12 diff
(96.9 %id)
BM844761 lymph node, stomach .c 2078 to 2456 1 to 378       378/378
(100 %)
12 diff
(96.9 %id)
T32758 heart .c 2603 to 2899 1 to 295       295/307
(96 %)
8 diff
(97.4 %id)
T35697 small intestine .c 3461 to 3780 320 to 1       320/321
(99 %)
0 diff
(100 %id)
T35698 small intestine .c 3461 to 3713 1 to 253       253/254
(99 %)
1 diff
(99.7 %id)
DN996802 breast cancer, Mammary gland (cancer tissue) .a 226 to 764 1 to 539   tiling clone,   539/539
(100 %)
5 diff
(99.1 %id)
DN996802 breast cancer, Mammary gland (cancer tissue) .a 226 to 764 1 to 539   tiling clone,   539/539
(100 %)
5 diff
(99.1 %id)
DN992603 brain, whole brain .d 350 to 994 9 to 652       644/652
(98 %)
7 diff
(99.0 %id)
DN992603 brain, whole brain .d 350 to 994 9 to 652       644/652
(98 %)
7 diff
(99.0 %id)
DB019314 esophageal, tumor tissue .c 1395 to 1961 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB029448 testis .c 1 to 240 2 to 242   capped   241/241
(100 %)
2 diff
(99.2 %id)
DB336895 testis .c 1535 to 2093 562 to 1       562/562
(100 %)
3 diff
(99.5 %id)
DB049823 testis .d 1 to 571 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
DB338486 testis .d 1389 to 1951 566 to 1       566/566
(100 %)
4 diff
(99.3 %id)
TI_149285929   .c 1310 to 2075 846 to 82   AAA   765/826
(92 %)
27 diff
(96.8 %id)
TI_154149776   .a 225 to 704 77 to 556       480/480
(100 %)
0 diff
(100 %id)
TI_154151402   .d 382 to 911 81 to 610       530/534
(99 %)
5 diff
(99.1 %id)
TI_157605543   .c 1571 to 2075 595 to 90   AAA   506/507
(99 %)
6 diff
(98.9 %id)
DB348367 trachea .c 1499 to 2029 1 to 531     Submitted on the opposite strand 531/531
(100 %)
1 diff
(99.9 %id)
BQ013802 placenta .c 2403 to 2991 602 to 14   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 589/602
(97 %)
2 diff
(99.7 %id)
CF529703 placenta .c 1663 to 2075 432 to 19   AAA   414/414
(100 %)
2 diff
(99.6 %id)
BM971772 lung .c 1544 to 2075 548 to 17   AAA   532/532
(100 %)
3 diff
(99.5 %id)
CA450191 Human Lung Epithelial cells, lung .c 1499 to 2006 19 to 527     Submitted on the opposite strand 509/536
(94 %)
11 diff
(98.0 %id)
CA450191 Human Lung Epithelial cells, lung .c 1499 to 2006 19 to 527     Submitted on the opposite strand 509/536
(94 %)
11 diff
(98.0 %id)
BM669486 eye, fetal eyes .c 3264 to 3778 535 to 21   fully sequenced,   515/535
(96 %)
0 diff
(100 %id)
BM669486 eye, fetal eyes .c 3264 to 3778 535 to 21   fully sequenced,   515/535
(96 %)
0 diff
(100 %id)
BM699271 eye, fetal eyes .c 2823 to 3294 1 to 472   fully sequenced,   472/472
(100 %)
0 diff
(100 %id)
BM699271 eye, fetal eyes .c 2823 to 3294 1 to 472   fully sequenced,   472/472
(100 %)
0 diff
(100 %id)
CK300719 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1478 to 2073 616 to 21   AAA   596/606
(98 %)
0 diff
(100 %id)
CK300719 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1478 to 2073 616 to 21   AAA   596/606
(98 %)
0 diff
(100 %id)
BU617668 Bone, Subchondral Bone .c 3672 to 4320 9 to 657     Submitted on the opposite strand 649/657
(98 %)
9 diff
(98.7 %id)
BU617668 Bone, Subchondral Bone .c 3672 to 4320 9 to 657     Submitted on the opposite strand 649/657
(98 %)
9 diff
(98.7 %id)
CA420811 Bone, Enchondroma cell line .c 3116 to 3780 683 to 19   AAA   665/665
(100 %)
0 diff
(100 %id)
CA420811 Bone, Enchondroma cell line .c 3116 to 3780 683 to 19   AAA   665/665
(100 %)
0 diff
(100 %id)
BU627624 Bone, Enchondroma cell line .c 3100 to 3780 699 to 19   AAA   681/681
(100 %)
0 diff
(100 %id)
BU627624 Bone, Enchondroma cell line .c 3100 to 3780 699 to 19   AAA   681/681
(100 %)
0 diff
(100 %id)
TI_151734396   .c 1478 to 2075 676 to 79   AAA   598/956
(62 %)
0 diff
(100 %id)
DB256329 uterus .c 1863 to 2282 2 to 421   capped   420/420
(100 %)
3 diff
(99.3 %id)
Z20895   .c 1654 to 1779 1 to 126       126/126
(100 %)
2 diff
(98.5 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C