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Gene MAGIXTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
85 supporting clones for gene MAGIX back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AV703475 adrenal gland .e 621 to 1042 1 to 422   AAA   422/422
(100 %)
2 diff
(99.6 %id)
AK025340 colon .b 1 to 2974 2 to 2975 H53R V114L F264L tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 2975/2975
(100 %)
4 diff
(99.9 %id)
AK094251 cerebellum .f 1 to 1756 2 to 1757 F10S H45R V106L F251L tiling clone, available from FLJ,   1757/1757
(100 %)
5 diff
(99.8 %id)
AK096058 Kidney .d 1 to 2303 60 to 2365 H53R V114L F259L tiling clone, available from FLJ,   2306/2365
(97 %)
10 diff
(99.6 %id)
DA057738 cerebellum .f 1 to 458 2 to 459   capped   458/458
(100 %)
0 diff
(100 %id)
DB296729 cerebellum .f 1303 to 1756 455 to 1       455/455
(100 %)
3 diff
(99.4 %id)
DA072017 cerebellum .a 220 to 798 2 to 580   tiling clone, capped   579/579
(100 %)
2 diff
(99.7 %id)
DA192982 amygdala .b 10 to 580 2 to 571   capped   570/581
(98 %)
4 diff
(99.4 %id)
BX104543 parathyroid gland, parathyroid tumor .e 688 to 1043 362 to 7     Submitted on the opposite strand 356/362
(98 %)
0 diff
(100 %id)
BP221564 colon .b 1 to 570 2 to 571       571/571
(100 %)
6 diff
(99.0 %id)
DQ884401   .d 1258 to 2070 1 to 813 H53R V114L F259L     813/813
(100 %)
3 diff
(99.7 %id)
AV661501 corresponding non cancerous liver tissue .b 2039 to 2664 1 to 624     Submitted on the opposite strand 624/624
(100 %)
1 diff
(99.9 %id)
AV720636 corresponding non cancerous liver tissue .b 2387 to 2974 586 to 1   tiling clone, Submitted on the opposite strand 586/586
(100 %)
7 diff
(98.9 %id)
AF147307   .j-u 1 to 395 398 to 4   tiling clone, Submitted on the opposite strand 395/398
(99 %)
0 diff
(100 %id)
T49766 ovary .j-u 27 to 377 1 to 353     Submitted on the opposite strand 353/356
(99 %)
8 diff
(97.8 %id)
R64587 placenta .e 354 to 573 220 to 1       220/222
(99 %)
2 diff
(99.1 %id)
R76528 placenta .d 1451 to 1853 420 to 5       416/488
(85 %)
25 diff
(94.9 %id)
W04719 parathyroid gland, parathyroid tumor .e 655 to 942 1 to 284     Submitted on the opposite strand 284/285
(99 %)
14 diff
(95.1 %id)
W31821 parathyroid gland, parathyroid tumor .e 648 to 1043 405 to 8     Submitted on the opposite strand 398/405
(98 %)
0 diff
(100 %id)
W37449 parathyroid gland, parathyroid tumor .a 490 to 832 347 to 1   tiling clone,   347/354
(98 %)
7 diff
(98.1 %id)
W37891 parathyroid gland, parathyroid tumor .a 501 to 832 334 to 1       334/334
(100 %)
5 diff
(98.6 %id)
AA524219 colon .e 655 to 1042 1 to 383   tiling clone, AAA Submitted on the opposite strand 383/383
(100 %)
11 diff
(97.2 %id)
AA564422 colon .e 655 to 1017 1 to 361     Submitted on the opposite strand 361/361
(100 %)
7 diff
(98.1 %id)
AA724788 pooled .c 478 to 606 129 to 1       129/129
(100 %)
0 diff
(100 %id)
AA885354 pooled .a 526 to 833 309 to 1       309/309
(100 %)
3 diff
(99.1 %id)
AI073869 pooled .a 444 to 666 223 to 1       223/223
(100 %)
2 diff
(99.2 %id)
AI091223 pooled .a 376 to 859 484 to 1       484/484
(100 %)
2 diff
(99.6 %id)
AI215824 carcinoid, lung .e 674 to 1027 1 to 354     Submitted on the opposite strand 354/354
(100 %)
1 diff
(99.8 %id)
AI300636 carcinoid, lung .e 384 to 590 207 to 1       207/207
(100 %)
0 diff
(100 %id)
AI362839 anaplastic oligodendroglioma, brain .e 252 to 590 339 to 1       339/340
(99 %)
2 diff
(99.5 %id)
AI369342 anaplastic oligodendroglioma, brain .i 63 to 510 448 to 1       448/448
(100 %)
1 diff
(99.8 %id)
AI493491 anaplastic oligodendroglioma, brain .a 393 to 833 441 to 1       441/441
(100 %)
3 diff
(99.4 %id)
AI380333 B-cell, chronic lymphotic leukemia .d 1437 to 1851 415 to 1       415/415
(100 %)
4 diff
(99.1 %id)
AI802971 pooled .a 362 to 859 498 to 1   tiling clone,   498/498
(100 %)
3 diff
(99.4 %id)
AI564863 anaplastic oligodendroglioma, brain .d 1540 to 1851 312 to 1       312/312
(100 %)
2 diff
(99.4 %id)
AI560982 anaplastic oligodendroglioma, brain .d 1402 to 1851 450 to 1       450/450
(100 %)
2 diff
(99.6 %id)
AI692385 carcinoid, lung .e 655 to 1027 1 to 373     Submitted on the opposite strand 373/373
(100 %)
2 diff
(99.5 %id)
AI800878 pooled .e 655 to 1004 1 to 350     Submitted on the opposite strand 350/350
(100 %)
1 diff
(99.8 %id)
AI761706 pooled .a 370 to 833 464 to 1       464/464
(100 %)
2 diff
(99.6 %id)
AI768110 pooled .a 362 to 833 472 to 1       472/472
(100 %)
2 diff
(99.6 %id)
AI884782 anaplastic oligodendroglioma, brain .i 1 to 510 510 to 1   tiling clone,   510/510
(100 %)
1 diff
(99.9 %id)
AI937551 anaplastic oligodendroglioma, brain .i 36 to 510 475 to 1       475/475
(100 %)
2 diff
(99.6 %id)
AI951639 fibrotheoma, ovary .e 655 to 1184 1 to 530   tiling clone, Submitted on the opposite strand 530/530
(100 %)
1 diff
(99.9 %id)
AW051988 pooled .a 371 to 833 463 to 1       463/468
(98 %)
3 diff
(99.4 %id)
AW167555 cervix .j-u 187 to 606 419 to 1       419/419
(100 %)
7 diff
(98.4 %id)
AW296791   .e 628 to 969 1 to 342     Submitted on the opposite strand 342/345
(99 %)
6 diff
(98.3 %id)
AW451187   .i 138 to 553 416 to 1   tiling clone,   416/425
(97 %)
2 diff
(99.6 %id)
AW418579 serous papillary carcinoma, high grade, 2pooled tumors, uterus .j-u 181 to 650 470 to 2 H23D T26R V28G K29G G30E ... tiling clone,   469/470
(99 %)
0 diff
(100 %id)
AW299510 Kidney .a 375 to 833 458 to 1       458/458
(100 %)
3 diff
(99.4 %id)
AW514302 lung, two pooled squamous cell carcinomas .a 423 to 877 455 to 1       455/455
(100 %)
16 diff
(96.5 %id)
BF509291   .e 628 to 1010 1 to 384     Submitted on the opposite strand 384/394
(97 %)
3 diff
(99.3 %id)
BF436176 pooled .a 491 to 859 369 to 1       369/369
(100 %)
1 diff
(99.8 %id)
BF060968 pooled .a 366 to 833 468 to 1       468/468
(100 %)
6 diff
(98.8 %id)
BG413572 pooled .a 313 to 833 521 to 1       521/521
(100 %)
3 diff
(99.5 %id)
BF592072 Kidney .j-u 280 to 606 326 to 1   tiling clone,   326/335
(97 %)
17 diff
(95.0 %id)
BC027995 Brain, Lung, Testis, adult, pooled whole .e 32 to 625 1 to 594   tiling clone, available from MGC,   594/594
(100 %)
7 diff
(98.9 %id)
BI819849 pooled brain, lung, testis .e 32 to 626 1 to 594   available from MGC,   594/594
(100 %)
8 diff
(98.7 %id)
BI759240 pooled colon, kidney, stomach .h 1 to 642 1 to 641   tiling clone,   641/641
(100 %)
3 diff
(99.6 %id)
BI761071 pooled colon, kidney, stomach .g -10 to 448 59 to 517   tiling clone,   459/517
(88 %)
9 diff
(98.3 %id)
BQ707366 Spleen .j-u 356 to 1230 1 to 880   tiling clone,   880/919
(95 %)
20 diff
(97.9 %id)
BC067800 Placenta, pre-eclamptic .c 1 to 1058 1 to 1058 S4* tiling clone, available from MGC, AAA   1058/1058
(100 %)
12 diff
(98.9 %id)
CB994420 placenta, pre-eclamptic placenta .c 2 to 564 29 to 589   available from MGC,   561/638
(87 %)
12 diff
(98.2 %id)
BC114943 PCR rescued clones .d 1199 to 3168 1 to 1971 H53R V114L A256G A257S Q258A ... tiling clone,   1971/1971
(100 %)
8 diff
(99.6 %id)
TI_57202943   .e 32 to 634 35 to 636       602/893
(67 %)
10 diff
(98.9 %id)
TI_57146065   .h 1 to 650 63 to 711 G55V K56R A57H H58V S59V ... tiling clone,   649/921
(70 %)
10 diff
(99.0 %id)
TI_57146756   .g -10 to 448 92 to 550     Suspected internal deletion 459/550
(83 %)
9 diff
(98.4 %id)
DA630560.
matches multiple genes
Kidney .d 75 to 428 135 to 491   tiling clone, capped also hits gene hute 357/490
(72 %)
6 diff
(98.8 %id)
DB320823.
matches multiple genes
Kidney .d 2097 to 2303 207 to 1     also hits gene hute 207/207
(100 %)
1 diff
(99.6 %id)
NM_024859.2   .a 1 to 2150 1 to 2150 H127R V188L F338L RefSeq,   2150/2150
(100 %)
3 diff
(99.9 %id)
NM_001099680.1   .f 1 to 2621 2 to 2622 H45R V106L F251L RefSeq,   2622/2622
(100 %)
3 diff
(99.9 %id)
NM_001099681.1   .c 2 to 1923 1 to 1922   RefSeq,   1922/1922
(100 %)
2 diff
(99.9 %id)
NM_001099682.1   .e 1 to 1907 1 to 1907 V112L F257L RefSeq,   1907/1907
(100 %)
2 diff
(99.9 %id)
AV749991 Pituitary .e 362 to 945 13 to 592   tiling clone,   580/594
(97 %)
15 diff
(97.5 %id)
DA718710   .k 1 to 553 2 to 556 S12X V50L tiling clone, capped   555/555
(100 %)
3 diff
(99.5 %id)
D20173   .f 535 to 846 312 to 1   tiling clone,   312/313
(99 %)
0 diff
(100 %id)
BM788543 stomach .b 1 to 580 2 to 582       582/587
(99 %)
5 diff
(99.2 %id)
TI_149314475   .a 371 to 1285 983 to 86   tiling clone, AAA   898/971
(92 %)
24 diff
(97.6 %id)
TI_149315407   .a 395 to 1285 971 to 93   AAA   879/971
(90 %)
17 diff
(98.3 %id)
DB239849 trachea .d 1046 to 1409 172 to 535   tiling clone, capped Suspected internal deletion 364/534
(68 %)
7 diff
(98.7 %id)
CB306035 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 346 to 1058 730 to 19   AAA   712/712
(100 %)
2 diff
(99.8 %id)
BQ045295 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 391 to 1058 685 to 19   AAA   667/667
(100 %)
2 diff
(99.8 %id)
BQ186555 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .j-u 233 to 642 1 to 409 H23D T26R V28G K29G G30E ... tiling clone,   409/409
(100 %)
9 diff
(97.8 %id)
BQ188957 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 1225 to 1837 1 to 613       613/613
(100 %)
2 diff
(99.7 %id)
BQ187140 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g 136 to 711 1 to 576   tiling clone,   576/576
(100 %)
4 diff
(99.4 %id)
TI_151809405   .c 244 to 650 76 to 482   tiling clone,   407/1061
(38 %)
3 diff
(99.8 %id)
TI_151733767   .d 1219 to 1895 723 to 47       677/1009
(67 %)
5 diff
(99.6 %id)
TI_151733815   .f 774 to 1348 622 to 48       575/1040
(55 %)
3 diff
(99.8 %id)
NM_024859.2   .a 1 to 2150 1 to 2150 H127R V188L F338L RefSeq,   2150/2150
(100 %)
3 diff
(99.9 %id)
NM_001099680.1   .f 1 to 2621 2 to 2622 H45R V106L F251L RefSeq,   2622/2622
(100 %)
3 diff
(99.9 %id)
NM_001099681.1 NM_001099681 MAGIX.cAug10 1923 1922 NM_001099681     1922 2
NM_001099682.1 NM_001099682 MAGIX.eAug10 1907 1907 NM_001099682     1907 2
AV749991 NPCBHC07 MAGIX.eAug10 945 592 NPCBHC07     580 15
DA718710 NT2RI2027011 MAGIX.kAug10 553 556 NT2RI2027011     555 3
D20173 pm1668 MAGIX.fAug10 846 1 pm1668     312 0
BM788543 S11SNU1-24-C01 MAGIX.bAug10 580 582 S11SNU1-24-C01     582 5
TI_149314475 TI_149314475 MAGIX.aAug10 1285 86 TI_149314475     898 24
TI_149315407 TI_149315407 MAGIX.aAug10 1285 93 TI_149315407     879 17
DB239849 TRACH3036186 MAGIX.dAug10 1409 535 TRACH3036186   Anomalous_clone 364 7
CB306035 UI-CF-EN1-aeh-b-05-0-UI MAGIX.cAug10 1058 19 UI-CF-EN1-aeh-b-05-0-UI     712 2
CB306035 UI-CF-EN1-aeh-b-05-0-UI MAGIX.cAug10 1058 19 UI-CF-EN1-aeh-b-05-0-UI     712 2
BQ045295 UI-CF-EN1-aei-m-02-0-UI MAGIX.cAug10 1058 19 UI-CF-EN1-aei-m-02-0-UI     667 2
BQ045295 UI-CF-EN1-aei-m-02-0-UI MAGIX.cAug10 1058 19 UI-CF-EN1-aei-m-02-0-UI     667 2
BQ186555 UI-E-EJ1-ajr-b-05-0-UI MAGIX.jAug10-unspliced 642 409 UI-E-EJ1-ajr-b-05-0-UI     409 9
BQ186555 UI-E-EJ1-ajr-b-05-0-UI MAGIX.jAug10-unspliced 642 409 UI-E-EJ1-ajr-b-05-0-UI     409 9
BQ188957 UI-E-EJ1-ajx-p-22-0-UI MAGIX.dAug10 1837 613 UI-E-EJ1-ajx-p-22-0-UI     613 2
BQ188957 UI-E-EJ1-ajx-p-22-0-UI MAGIX.dAug10 1837 613 UI-E-EJ1-ajx-p-22-0-UI     613 2
BQ187140 UI-E-EJ1-ajz-g-21-0-UI MAGIX.gAug10 711 576 UI-E-EJ1-ajz-g-21-0-UI     576 4
BQ187140 UI-E-EJ1-ajz-g-21-0-UI MAGIX.gAug10 711 576 UI-E-EJ1-ajz-g-21-0-UI     576 4
TI_151809405 UIACBCB_UI-E-EJ1-ajq-p-16-0-UI MAGIX.cAug10 650 482 UIACBCB_UI-E-EJ1-ajq-p-16-0-UI     407 3
TI_151733767 UIACBCB_UI-E-EJ1-ajx-p-22-0-UI MAGIX.dAug10 1895 47 UIACBCB_UI-E-EJ1-ajx-p-22-0-UI     677 5
TI_151733815 UIACBCB_UI-E-EJ1-ajz-g-21-0-UI MAGIX.fAug10 1348 48 UIACBCB_UI-E-EJ1-ajz-g-21-0-UI     575 3
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C