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Gene TOMM40LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
315 supporting clones for gene TOMM40L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA324625 brain, cerebellum .c 679 to 1069 1 to 391       391/391
(100 %)
1 diff
(99.8 %id)
BP199622 brain .m 1 to 582 1 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
AK022832   .h 1 to 2396 1 to 2396 exact tiling clone, available from FLJ,   2396/2396
(100 %)
2 diff
(100.0 %id)
AK027704   .b 117 to 2762 1 to 2646 exact tiling clone, available from FLJ,   2646/2646
(100 %)
2 diff
(100.0 %id)
AK297848 heart .e 1 to 1201 1 to 1201 exact tiling clone,   1201/1201
(100 %)
1 diff
(100.0 %id)
DC299891   .b 57 to 630 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
DA032265   .b 129 to 695 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
AW964730   .c 680 to 1074 1 to 395       395/395
(100 %)
18 diff
(95.5 %id)
BC014946 Skin, melanotic melanoma, high MDR. .a 66 to 2698 1 to 2633 exact tiling clone, available from MGC, AAA   2633/2633
(100 %)
1 diff
(100.0 %id)
BE073453 breast .c 820 to 1174 1 to 355       355/356
(99 %)
16 diff
(95.6 %id)
BF904511 marrow .g 674 to 888 247 to 32   tiling clone, Submitted on the opposite strand 216/247
(87 %)
0 diff
(100 %id)
BF913284 uterus_tumor .d 827 to 1303 484 to 8     Submitted on the opposite strand 477/484
(98 %)
1 diff
(99.8 %id)
BF913388 uterus_tumor .c 585 to 848 12 to 271       260/271
(95 %)
8 diff
(97.1 %id)
BF917590 uterus_tumor .d 817 to 1303 494 to 8   tiling clone, Submitted on the opposite strand 487/500
(97 %)
3 diff
(99.4 %id)
BF917894 uterus_tumor .d 817 to 1303 494 to 8     Submitted on the opposite strand 487/500
(97 %)
3 diff
(99.4 %id)
BF917968 uterus_tumor .d 1100 to 1434 335 to 1     Submitted on the opposite strand 335/335
(100 %)
9 diff
(97.4 %id)
BF917969 uterus_tumor .c 825 to 1227 403 to 1     Submitted on the opposite strand 403/414
(97 %)
11 diff
(97.4 %id)
BI059754 uterus_tumor .d 817 to 1303 494 to 8       487/500
(97 %)
3 diff
(99.4 %id)
DA049523   .b 123 to 682 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA051670   .b 121 to 693 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BQ362619 stomach .d 1468 to 1714 1 to 247       247/258
(95 %)
16 diff
(93.8 %id)
DA057755 cerebellum .g 118 to 684 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA067282 cerebellum .b 125 to 691 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA120460 cerebellum .l 1 to 553 2 to 554 exact tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
DC312361 alzheimer cortex .e 1 to 582 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA145372 amygdala .p 1 to 562 4 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DA146239 amygdala .b 128 to 669 2 to 546   capped   545/554
(98 %)
4 diff
(99.3 %id)
DA149081 amygdala .b 118 to 603 2 to 486   capped   485/485
(100 %)
2 diff
(99.6 %id)
DC314227 amygdala .b 1 to 489 6 to 494   tiling clone,   494/494
(100 %)
1 diff
(99.8 %id)
DA158204 amygdala .g 152 to 698 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA160426 amygdala .b 101 to 687 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA173097 amygdala .b 118 to 674 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA182060 amygdala .c 25 to 580 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA199234 brain .g 1 to 546 6 to 551   tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
DC319446 brain .e 4 to 571 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DA206648 brain .g 125 to 692 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DC329183 corpus callosum .e 10 to 581 9 to 580       572/572
(100 %)
0 diff
(100 %id)
DA287901 corpus callosum .b 113 to 672 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DA290202 hippocampus .n 1 to 581 4 to 584 exact tiling clone, capped   583/583
(100 %)
0 diff
(100 %id)
DA295382 hippocampus .c 58 to 635 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA308465 hippocampus .g 63 to 622 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA342729 substantia nigra .b 118 to 694 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA386673 thalamus .b 125 to 693 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA389061 thalamus .m 9 to 596 2 to 589 exact tiling clone, capped   588/588
(100 %)
0 diff
(100 %id)
DA389781 thalamus .b 118 to 609 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
DA392900 thalamus .g 68 to 656 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA394852 thalamus .g 125 to 706 2 to 583   tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
DA395310 thalamus .a 109 to 616 2 to 509   capped   508/508
(100 %)
0 diff
(100 %id)
DA396664 thalamus .b 125 to 702 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DC341974 thalamus .e 11 to 603 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
BX537951 human retina .c 1 to 3376 1 to 3376 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 3376/3376
(100 %)
3 diff
(100.0 %id)
Z38960 brain, total brain .b 2496 to 2762 267 to 1       267/267
(100 %)
0 diff
(100 %id)
Z42823 brain, total brain .b 1007 to 1317 1 to 311       311/311
(100 %)
0 diff
(100 %id)
Z45632 brain, total brain .d 1515 to 1831 1 to 317       317/317
(100 %)
0 diff
(100 %id)
DA419718 cord Blood .b 115 to 657 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
CD176611 embryonic trophoblasts, made from WA01 stemcells .b 2630 to 2762 18 to 150   AAA   133/150
(88 %)
6 diff
(96.0 %id)
CD633696   .c 286 to 939 1 to 653       653/655
(99 %)
9 diff
(98.7 %id)
CD633697   .c 285 to 916 632 to 1       630/634
(99 %)
10 diff
(98.5 %id)
DA422669 cervix .b 121 to 676 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
BX404059 neuroblastoma .c 17 to 960 1 to 943       943/943
(100 %)
1 diff
(99.9 %id)
CR735337 blood, natural killer cells, cell line .d 1823 to 2322 37 to 536       500/536
(93 %)
6 diff
(98.9 %id)
AL516241 brain, neuroblastoma, neuroblastoma cells .c 1827 to 2594 768 to 1       768/805
(95 %)
20 diff
(97.6 %id)
AL516242 brain, neuroblastoma, neuroblastoma cells .c 9 to 893 1 to 885       885/885
(100 %)
6 diff
(99.4 %id)
AL521362 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 1754 to 2731 980 to 4       977/980
(99 %)
0 diff
(100 %id)
AL521363 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 131 to 1036 1 to 906       906/906
(100 %)
0 diff
(100 %id)
AL523459 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .f 1 to 1024 1 to 1012 F72X P216L L217C P218L V219S ... tiling clone,   1012/1086
(93 %)
17 diff
(98.5 %id)
AL557813 T cells from T cell leukemia .b 139 to 1116 1 to 977       975/977
(99 %)
12 diff
(98.8 %id)
AL579776 T cells from T cell leukemia .b 1967 to 2869 891 to 1       891/970
(91 %)
24 diff
(97.6 %id)
BX401280   .b 1674 to 2734 1059 to 9       1051/1101
(95 %)
0 diff
(100 %id)
BX401281   .b 129 to 1017 1 to 883       883/883
(100 %)
26 diff
(97.1 %id)
BX405645 fetal liver, Liver .b 1664 to 2732 1053 to 1       1053/1120
(94 %)
28 diff
(97.5 %id)
BX405646 fetal liver, Liver .b 138 to 1126 1 to 987       987/1080
(91 %)
13 diff
(98.8 %id)
BX452463 fetal liver, Liver .c 738 to 1586 1 to 841       841/953
(88 %)
13 diff
(98.7 %id)
BX456241 fetal liver, Liver .b 1961 to 2767 812 to 1       812/933
(87 %)
26 diff
(97.3 %id)
BX463272 fetal liver, Liver .c 21 to 992 1 to 964       964/964
(100 %)
15 diff
(98.5 %id)
DC346729 tongue, tumor tissue .m 1 to 560 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
DA451448 tongue, tumor tissue .b 118 to 677 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA453917 tongue, tumor tissue .b 121 to 693 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA480425   .b 121 to 673 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
AL599528   .c 615 to 977 1 to 363       363/363
(100 %)
0 diff
(100 %id)
AL712055 human skeletal muscle .c 1 to 666 1 to 667       667/667
(100 %)
2 diff
(99.8 %id)
BX488384   .b 119 to 585 1 to 467       467/467
(100 %)
5 diff
(99.0 %id)
DT217832 brain .d 1566 to 2023 1 to 457       457/457
(100 %)
1 diff
(99.8 %id)
EL733551 mixed .c 211 to 867 1 to 657       658/661
(99 %)
7 diff
(99.0 %id)
EL954941 eyeball .d 1852 to 2180 2 to 329       328/329
(99 %)
8 diff
(97.6 %id)
DA481326   .b 118 to 655 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
BP230178 brain .d 108 to 691 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DA483031 brain .b 118 to 868 2 to 751   capped   750/778
(96 %)
13 diff
(98.4 %id)
DA488018 brain .g 125 to 684 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA497805 brain .b 118 to 690 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA500441 brain .b 121 to 678 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA500688 brain .d 1 to 570 2 to 571   tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
DA503754 brain .b 118 to 675 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA503760 brain .b 118 to 674 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA513302 brain .g 125 to 696 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DC352346 brain .e 4 to 575 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DA516453 brain .b 118 to 670 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA516501 brain .d 118 to 664 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DC352964 brain .b 110 to 622 1 to 513       513/513
(100 %)
2 diff
(99.7 %id)
DA530883 brain .d 117 to 710 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
FN071313 breast carcinoma .d 2437 to 2540 1 to 105       105/105
(100 %)
1 diff
(99.1 %id)
GD136132   .b 2551 to 2757 5 to 210       206/214
(96 %)
5 diff
(97.7 %id)
DB463352.
matches multiple genes
hippocampus .b 127 to 564 1 to 439     also hits gene NR1I3 439/439
(100 %)
9 diff
(98.0 %id)
DA555531   .b 109 to 665 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA559063   .b 121 to 671 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BP235096 coronary artery .c 756 to 1337 1 to 584       584/592
(98 %)
14 diff
(97.7 %id)
DC356517 heart .m 25 to 589 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DC356718 heart .e 1 to 574 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DA563530 heart .b 116 to 593 2 to 482   capped   481/481
(100 %)
4 diff
(99.2 %id)
BP242726 Liver .b 117 to 681 1 to 567       567/570
(99 %)
20 diff
(96.5 %id)
BP243421 Liver .b 117 to 696 1 to 580       580/580
(100 %)
0 diff
(100 %id)
T05534   .d 1793 to 2162 1 to 370       370/371
(99 %)
1 diff
(99.8 %id)
DC357758   .b 57 to 635 1 to 581       581/581
(100 %)
4 diff
(99.4 %id)
DA580437   .b 118 to 692 2 to 577   capped   576/576
(100 %)
3 diff
(99.5 %id)
DA587852 lung .b 121 to 702 2 to 584   capped   583/583
(100 %)
3 diff
(99.5 %id)
DA588573 lung .d 118 to 693 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BP260020 heart .b 101 to 681 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
R13401 whole brain .b 1524 to 1899 1 to 387       387/387
(100 %)
14 diff
(96.4 %id)
R40915 whole brain .b 2338 to 2781 464 to 11       454/464
(97 %)
0 diff
(100 %id)
H62738 liver and spleen .d 1592 to 2017 1 to 434       434/437
(99 %)
12 diff
(97.3 %id)
N49945 multiple sclerosis lesions .b 2301 to 2763 463 to 1   fully sequenced,   463/463
(100 %)
2 diff
(99.6 %id)
N52727 multiple sclerosis lesions .b 1994 to 2331 1 to 348   fully sequenced,   348/348
(100 %)
8 diff
(97.8 %id)
N99071 senescent fibroblast .b 2409 to 2767 362 to 5       358/435
(82 %)
0 diff
(100 %id)
W30679 senescent fibroblast .b 1595 to 1818 17 to 241       225/247
(91 %)
4 diff
(98.4 %id)
AA733067 heart .b 2546 to 2761 218 to 3       216/218
(99 %)
0 diff
(100 %id)
AA004303 liver and spleen .b 2399 to 2762 375 to 1       375/405
(92 %)
13 diff
(96.8 %id)
AA084755   .b 2212 to 2448 1 to 237   fully sequenced,   237/237
(100 %)
3 diff
(98.8 %id)
AA085370   .b 2418 to 2771 355 to 1   fully sequenced,   355/355
(100 %)
0 diff
(100 %id)
AA160608 Pancreas .b 1331 to 1885 1 to 539       539/598
(90 %)
24 diff
(96.0 %id)
AA161467 Pancreas .b 2338 to 2762 433 to 11   AAA   423/426
(99 %)
2 diff
(99.6 %id)
AA626300 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2603 to 2770 165 to 1       165/165
(100 %)
1 diff
(99.4 %id)
AA447727 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2258 to 2747 490 to 1       490/490
(100 %)
0 diff
(100 %id)
AA447889 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1282 to 1781 1 to 498       498/498
(100 %)
2 diff
(99.6 %id)
AA773321 lung, lung carcinoma .b 2437 to 2763 327 to 1       327/327
(100 %)
0 diff
(100 %id)
AA594687 colon, colon tumor RER+ .b 2342 to 2761 420 to 1       420/420
(100 %)
0 diff
(100 %id)
AA902696 carcinoid, lung .b 2156 to 2769 618 to 4       615/619
(99 %)
0 diff
(100 %id)
AA987535 carcinoid, lung .b 2354 to 2763 410 to 1       410/410
(100 %)
0 diff
(100 %id)
AI081566 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2288 to 2763 476 to 1       476/476
(100 %)
0 diff
(100 %id)
AI079865 senescent fibroblast .b 2410 to 2773 368 to 5       364/368
(98 %)
0 diff
(100 %id)
AI096402 heart .b 2310 to 2762 453 to 1       453/453
(100 %)
0 diff
(100 %id)
AI298532 carcinoid, lung .b 2408 to 2762 367 to 13   AAA   355/355
(100 %)
1 diff
(99.8 %id)
AI343626 2 pooled tumors (clear cell type), Kidney .b 2294 to 2764 470 to 1       470/470
(100 %)
4 diff
(99.2 %id)
AI379554 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2312 to 2762 451 to 1       451/451
(100 %)
1 diff
(99.8 %id)
AI742751 pooled .b 2409 to 2762 372 to 18   AAA   355/355
(100 %)
4 diff
(98.9 %id)
AW028065 brain, glioblastoma (pooled) .b 2196 to 2762 567 to 1       567/567
(100 %)
0 diff
(100 %id)
AW170123 cervix, tumor .b 2293 to 2778 486 to 1       486/486
(100 %)
1 diff
(99.8 %id)
AW138294   .b 2263 to 2762 517 to 18   AAA   500/500
(100 %)
1 diff
(99.8 %id)
BE019730 adenocarcinoma cell line, ovary .b 718 to 1117 1 to 392       392/520
(75 %)
8 diff
(98.5 %id)
BE206329 adenocarcinoma cell line, ovary .b 2377 to 2775 413 to 15   AAA   399/399
(100 %)
5 diff
(98.8 %id)
BE271652 adenocarcinoma cell line, ovary .c 548 to 1257 1 to 711       711/797
(89 %)
5 diff
(99.4 %id)
BE262030 brain, neuroblastoma .c 193 to 729 1 to 537       537/537
(100 %)
0 diff
(100 %id)
BE313902 brain, neuroblastoma .c 195 to 819 1 to 625       625/682
(91 %)
9 diff
(98.7 %id)
BE314094 brain, neuroblastoma .c 193 to 815 1 to 624       624/669
(93 %)
3 diff
(99.6 %id)
BF941397 dorsal root ganglia .b 2324 to 2759 434 to 1       434/434
(100 %)
8 diff
(98.2 %id)
BF055538 pooled .b 2331 to 2763 434 to 1       434/434
(100 %)
2 diff
(99.6 %id)
BF477530 brain, glioblastoma (pooled) .b 2324 to 2747 441 to 18   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 424/424
(100 %)
0 diff
(100 %id)
BE295655 muscle, rhabdomyosarcoma .d 1689 to 2295 1 to 607       607/607
(100 %)
0 diff
(100 %id)
BE798432 lung, small cell carcinoma .c 774 to 1555 19 to 800       782/883
(88 %)
29 diff
(96.8 %id)
BF304844 muscle, rhabdomyosarcoma .d 1367 to 2193 1 to 820       820/934
(87 %)
47 diff
(95.0 %id)
BF684371 leiomyosarcoma cell line, uterus .d 1203 to 1876 11 to 679       669/778
(85 %)
20 diff
(97.5 %id)
BF972648 leiomyosarcoma cell line, uterus .d 1193 to 1895 1 to 712       712/945
(75 %)
17 diff
(98.3 %id)
BG116861 duodenal adenocarcinoma, cell line, small intestine .c 22 to 685 24 to 680       657/680
(96 %)
15 diff
(97.8 %id)
BG337239 leiomyosarcoma cell line, uterus .d 1193 to 1965 1 to 766       766/822
(93 %)
12 diff
(98.6 %id)
BG337877 leiomyosarcoma cell line, uterus .d 1203 to 1965 11 to 764       754/914
(82 %)
29 diff
(96.9 %id)
BG760492 melanotic melanoma, high MDR (cell line), skin .c 706 to 1510 1 to 807       807/808
(99 %)
18 diff
(97.8 %id)
BI093893 cervix .d 1754 to 2610 1 to 856   tiling clone,   856/858
(99 %)
13 diff
(98.5 %id)
BI252145 hepatocellular carcinoma, cell line, Liver .c 166 to 687 1 to 534       534/786
(67 %)
23 diff
(97.1 %id)
BI819082 pooled brain, lung, testis .c 12 to 673 1 to 669       669/669
(100 %)
12 diff
(98.3 %id)
BI752487 brain .c 13 to 648 1 to 648       648/1069
(60 %)
28 diff
(97.4 %id)
BI766961 pooled lung and spleen .e 14 to 628 1 to 622       622/689
(90 %)
17 diff
(97.6 %id)
BI833962 pooled pancreas and spleen .c 17 to 677 1 to 680       680/680
(100 %)
28 diff
(95.9 %id)
BI916936 brain .e 31 to 690 1 to 664       664/664
(100 %)
10 diff
(98.5 %id)
BI913751 brain .c 747 to 1482 1 to 739       739/739
(100 %)
7 diff
(99.1 %id)
BM048226 carcinoma, cell line, Prostate .c 817 to 1522 7 to 715       709/716
(99 %)
26 diff
(96.4 %id)
BM917040 blood, natural killer cells, cell line .b 1736 to 2767 1 to 1037   tiling clone, AAA   1037/1076
(96 %)
25 diff
(97.7 %id)
BM904090 lymph, lymphoma, cell line .c 18 to 895 1 to 895       873/1036
(84 %)
15 diff
(98.6 %id)
BM449557 melanotic melanoma, skin .c 176 to 814 7 to 643       637/1005
(63 %)
18 diff
(98.3 %id)
BM467326 duodenal adenocarcinoma, cell line, small intestine .c 346 to 976 1 to 633       633/1266
(50 %)
15 diff
(98.9 %id)
BM809022 brain, hippocampus .c 13 to 674 14 to 683       670/975
(68 %)
20 diff
(98.0 %id)
BM919025 pooled pancreas and spleen .c 13 to 894 25 to 917       891/1108
(80 %)
37 diff
(96.7 %id)
BQ067870 brain .e 172 to 893 1 to 729       683/1035
(65 %)
22 diff
(97.9 %id)
BQ233507 large cell carcinoma, lung .c 838 to 1678 1 to 861       861/1078
(79 %)
46 diff
(95.8 %id)
BQ050680 leiomyosarcoma, uterus .d 1472 to 2279 1 to 816       816/1057
(77 %)
11 diff
(99.0 %id)
BQ059000 lymph, lymphoma, cell line .c 22 to 996 1 to 989       989/1064
(92 %)
17 diff
(98.5 %id)
BQ001244 lung, Metastatic Chondrosarcoma .b 2213 to 2762 568 to 19   AAA   550/551
(99 %)
8 diff
(98.6 %id)
BQ069997 brain, neuroblastoma, cell line .d 1581 to 2298 1 to 723       723/1078
(67 %)
23 diff
(97.9 %id)
BQ070087 brain, neuroblastoma, cell line .c 179 to 994 1 to 824       824/1057
(77 %)
25 diff
(97.7 %id)
BQ053725 blood, natural killer cells, cell line .d 1475 to 2393 1 to 949       949/1023
(92 %)
33 diff
(96.8 %id)
BQ231143 epithelioid carcinoma, Pancreas .c 431 to 1305 1 to 881       881/915
(96 %)
17 diff
(98.2 %id)
BQ212707 melanotic melanoma, skin .c 173 to 993 12 to 839       828/899
(92 %)
19 diff
(97.9 %id)
BU149549 melanotic melanoma, cell line, skin .d 1195 to 2056 1 to 864       864/900
(96 %)
10 diff
(98.9 %id)
BU173587 melanotic melanoma, cell line, skin .d 1203 to 1755 19 to 582       564/1077
(52 %)
39 diff
(96.4 %id)
BU160292 melanotic melanoma, skin .c 193 to 895 1 to 708       708/869
(81 %)
8 diff
(99.1 %id)
BQ933530 sciatic nerve .c 232 to 993 11 to 780       768/978
(78 %)
22 diff
(97.8 %id)
BQ674832 epidermoid carcinoma, cell line, salivary gland .b 1879 to 2771 1 to 892   AAA   892/892
(100 %)
22 diff
(97.6 %id)
BQ681335 melanotic melanoma, cell line, skin .d 1195 to 2169 1 to 981       981/992
(98 %)
10 diff
(99.0 %id)
BQ684804 ductal carcinoma, cell line, Pancreas .d 1326 to 2128 23 to 830       808/920
(87 %)
8 diff
(99.2 %id)
BU168678 melanotic melanoma, cell line, skin .d 1203 to 2027 9 to 844       836/951
(87 %)
15 diff
(98.5 %id)
BU197197 epidermoid carcinoma, cell line, salivary gland .b 1878 to 2773 1 to 905   AAA   905/905
(100 %)
27 diff
(97.1 %id)
BQ670706 epidermoid carcinoma, cell line, salivary gland .d 1965 to 2644 25 to 704       680/970
(70 %)
67 diff
(93.1 %id)
BU163181 melanotic melanoma, cell line, skin .d 1203 to 1894 9 to 713       705/876
(80 %)
18 diff
(98.0 %id)
BQ646811 hepatocellular carcinoma, cell line, Liver .d 1276 to 2195 1 to 929   tiling clone,   929/931
(99 %)
21 diff
(97.8 %id)
BQ682586 melanotic melanoma, cell line, skin .d 1203 to 2084 9 to 901       893/952
(93 %)
29 diff
(97.0 %id)
BQ676057 melanotic melanoma, cell line, skin .d 1203 to 2145 9 to 954       946/957
(98 %)
42 diff
(95.7 %id)
BQ643880 hepatocellular carcinoma, cell line, Liver .d 1276 to 2174 1 to 906       906/983
(92 %)
35 diff
(96.5 %id)
BQ652287 hepatocellular carcinoma, cell line, Liver .d 1276 to 2244 1 to 980       980/988
(99 %)
73 diff
(92.7 %id)
BQ647315 hepatocellular carcinoma, cell line, Liver .d 1271 to 2130 1 to 882       882/1017
(86 %)
25 diff
(97.6 %id)
BQ645794 hepatocellular carcinoma, cell line, Liver .d 1276 to 2052 1 to 802       802/938
(85 %)
46 diff
(95.1 %id)
BQ680608 melanotic melanoma, cell line, skin .d 1203 to 1931 29 to 759       731/971
(75 %)
11 diff
(98.9 %id)
BQ677186 melanotic melanoma, cell line, skin .d 1203 to 2010 9 to 820       812/961
(84 %)
25 diff
(97.4 %id)
BQ644868 hepatocellular carcinoma, cell line, Liver .c 169 to 896 1 to 737       736/949
(77 %)
19 diff
(98.0 %id)
BQ649517 hepatocellular carcinoma, cell line, Liver .c 169 to 794 1 to 627       627/843
(74 %)
11 diff
(98.7 %id)
BQ887472 carcinoma, cell line, Prostate .c 813 to 1637 1 to 831   tiling clone,   831/911
(91 %)
21 diff
(97.7 %id)
BU940944 mixed (pool of 40 RNAs) .d 1910 to 2351 1 to 442       442/813
(54 %)
10 diff
(98.8 %id)
CX166282 human embryonic stem cells differentiated toan early endodermal cell type .c 279 to 1101 1 to 822       822/822
(100 %)
1 diff
(99.9 %id)
CB989817 Human Placenta, placenta .d 120 to 892 28 to 803   tiling clone,   776/889
(87 %)
10 diff
(98.9 %id)
TI_57219167   .c 13 to 648 34 to 681       648/1102
(58 %)
32 diff
(97.1 %id)
TI_57196706   .c 12 to 673 35 to 703       669/703
(95 %)
15 diff
(97.9 %id)
TI_57178695   .e 14 to 628 46 to 667       622/734
(84 %)
20 diff
(97.3 %id)
TI_57164435   .c 17 to 677 33 to 712       680/712
(95 %)
29 diff
(96.0 %id)
TI_57239458   .e 28 to 690 23 to 689       667/689
(96 %)
14 diff
(98.0 %id)
TI_57241751   .c 747 to 1482 31 to 769       739/769
(96 %)
13 diff
(98.4 %id)
BP275551 Kidney .d 120 to 701 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DA623718 Kidney .b 118 to 658 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA644196   .b 118 to 681 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
AV760755 bone marrow .c 351 to 1035 1 to 676       676/677
(99 %)
14 diff
(98.0 %id)
DA654363   .d 121 to 660 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA656689   .b 118 to 684 2 to 568   capped   567/569
(99 %)
3 diff
(99.5 %id)
DA666080   .b 121 to 665 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA666274   .c 335 to 884 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
NM_032174.4   .b 100 to 2775 1 to 2676 exact RefSeq, AAA   2676/2676
(100 %)
0 diff
(100 %id)
DA686800   .g 118 to 653 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DC365849   .b 124 to 604 1 to 482       482/490
(98 %)
1 diff
(99.8 %id)
DA690024   .b 118 to 660 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DC366112   .b 57 to 592 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DA710679   .o 1 to 548 7 to 554 Q26R tiling clone, capped   553/553
(100 %)
1 diff
(99.9 %id)
DA710728   .b 120 to 668 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA711004   .b 124 to 666 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DA717505   .b 109 to 656 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
AU127584   .h 2 to 554 2 to 556   capped   555/569
(97 %)
13 diff
(97.8 %id)
AU150131   .h 1902 to 2396 495 to 1       495/510
(97 %)
11 diff
(97.9 %id)
DC424326   .a 1 to 362 1 to 364   tiling clone,   364/366
(99 %)
9 diff
(97.6 %id)
DC427170   .a 2099 to 2670 569 to 1       569/572
(99 %)
18 diff
(96.9 %id)
DA737477   .b 118 to 835 2 to 722   capped   721/726
(99 %)
13 diff
(98.3 %id)
DB370087   .b 2235 to 2762 527 to 1       527/531
(99 %)
4 diff
(99.3 %id)
DA737985   .b 121 to 850 2 to 730   capped   729/729
(100 %)
3 diff
(99.6 %id)
DB370600   .b 2225 to 2770 546 to 1       546/546
(100 %)
3 diff
(99.5 %id)
DA745093   .d 118 to 663 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA746168   .k 1 to 566 7 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA746677   .b 123 to 693 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
DA747999   .b 118 to 682 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA769768 brain .g 59 to 645 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA776953 brain .b 117 to 684 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA788745 brain .i 1 to 580 2 to 581 exact tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
DA789049 brain .b 109 to 694 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DA793694 brain .b 118 to 603 2 to 487   capped   486/486
(100 %)
0 diff
(100 %id)
DA795740 brain .b 125 to 677 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BP312857 mammary gland .c 21 to 613 1 to 593       593/593
(100 %)
3 diff
(99.5 %id)
BP312872 mammary gland .c 21 to 604 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
BP313464 mammary gland .c 21 to 603 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DA819279   .b 121 to 644 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DA822119 pericardium .b 125 to 697 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA825418 pericardium .b 123 to 693 2 to 573   capped   572/573
(99 %)
3 diff
(99.5 %id)
DA867987 Prostate .d 125 to 666 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA873983 Prostate .b 121 to 685 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA887917   .j 1 to 569 4 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA889735   .b 117 to 673 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BM772356 stomach .b 2149 to 2756 1 to 608       608/610
(99 %)
1 diff
(99.9 %id)
BM772403 stomach .b 2149 to 2748 1 to 600       600/600
(100 %)
0 diff
(100 %id)
BM822078 stomach .c 5 to 274 1 to 269       269/269
(100 %)
4 diff
(98.6 %id)
BM793386 Ascites, stomach .b 2289 to 2760 1 to 472       472/472
(100 %)
0 diff
(100 %id)
BM823664 Ascites, stomach .c 815 to 1313 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
TI_1948242279   .c 211 to 383 132 to 304       173/201
(86 %)
6 diff
(97.1 %id)
TI_1948242280   .c 211 to 817 131 to 738       608/1493
(40 %)
10 diff
(99.4 %id)
TI_1948242545   .c 211 to 1133 139 to 1064       926/1380
(67 %)
26 diff
(98.2 %id)
TI_1948242546   .c 211 to 1133 127 to 1043       917/1373
(66 %)
29 diff
(97.9 %id)
TI_1948242547   .c 213 to 1136 1058 to 128       927/1283
(72 %)
27 diff
(97.9 %id)
TI_1948242548   .c 487 to 1136 772 to 122       651/1451
(44 %)
8 diff
(99.5 %id)
TI_1948242835   .c 211 to 370 132 to 291       160/188
(85 %)
9 diff
(95.3 %id)
TI_1948242836   .c 211 to 891 134 to 816       683/1394
(48 %)
34 diff
(97.6 %id)
TI_1948242838   .c 485 to 1136 778 to 126       653/1360
(48 %)
18 diff
(98.7 %id)
TI_1948243121   .c 211 to 396 127 to 312       186/213
(87 %)
6 diff
(97.2 %id)
TI_1948243122   .c 211 to 930 134 to 858       725/1443
(50 %)
17 diff
(98.9 %id)
TI_1948243124   .c 324 to 1136 945 to 123       822/1327
(61 %)
25 diff
(98.2 %id)
DA924769 small intestine .b 118 to 690 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BP346323 synovial membrane .b 127 to 706 1 to 580       580/581
(99 %)
3 diff
(99.5 %id)
DB002735 breast, tumor tissue .d 117 to 681 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DR006060 Prostate .c 105 to 663 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
BP358601 mammary gland .c 212 to 794 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BP358638 mammary gland .c 211 to 795 1 to 586       586/586
(100 %)
10 diff
(98.3 %id)
DB049041 testis .b 121 to 681 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DB056570 testis .g 118 to 544 2 to 428   capped   427/427
(100 %)
1 diff
(99.8 %id)
BP361791 thalamus .d 2079 to 2660 1 to 582   tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
DB109038 thymus .b 117 to 693 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB124157 thymus .b 125 to 694 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB142383 thymus .b 117 to 593 2 to 479   capped   478/478
(100 %)
2 diff
(99.6 %id)
BP365304 lung .d 1197 to 1779 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
TI_149313959   .b 1889 to 2762 939 to 86   AAA   854/954
(89 %)
24 diff
(97.5 %id)
TI_154111352   .b 1938 to 2762 875 to 62   AAA   814/940
(86 %)
16 diff
(98.3 %id)
TI_154127997   .b 2020 to 2770 830 to 86   AAA   745/943
(79 %)
16 diff
(98.4 %id)
TI_154195626   .b 78 to 709 65 to 702       636/1002
(63 %)
64 diff
(93.7 %id)
TI_154196874   .b 63 to 703 7 to 650       644/1102
(58 %)
32 diff
(97.1 %id)
TI_154197258   .b 78 to 868 94 to 886       697/1013
(68 %)
35 diff
(96.6 %id)
DC411468 kidney, tumor tissue .b 62 to 561 1 to 501       501/501
(100 %)
3 diff
(99.5 %id)
DC412094 kidney, tumor tissue .m 4 to 557 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DB180902 kidney, tumor tissue .b 121 to 676 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB189467 lung, tumor tissue .b 125 to 657 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DB205447 trachea .c 3 to 361 2 to 360   capped   359/359
(100 %)
1 diff
(99.8 %id)
DB210443 trachea .b 121 to 686 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
BM975658 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2365 to 2747 398 to 16   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 383/383
(100 %)
0 diff
(100 %id)
CB305777 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 1983 to 2762 791 to 19   AAA   773/775
(99 %)
7 diff
(99.1 %id)
BM696582 eye, lens .b 2097 to 2693 1 to 597       597/597
(100 %)
0 diff
(100 %id)
BM698751 eye, fetal eyes .b 1381 to 1867 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
BU737204 eye, fetal eyes .b 2347 to 2775 447 to 19   AAA   429/439
(97 %)
0 diff
(100 %id)
CA448384 Chondrosarcoma, Left Pubic Bone .b 2144 to 2762 637 to 19   AAA   619/619
(100 %)
0 diff
(100 %id)
CA411898 Chondrosarcoma Grade II, Left Pelvis .b 2177 to 2904 746 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 728/728
(100 %)
3 diff
(99.6 %id)
BU619497 Cell Line, Chondrosarcoma .b 2090 to 2770 698 to 19   AAA   680/687
(98 %)
1 diff
(99.9 %id)
CB529715 Aveolar Macrophage, lung .b 2090 to 2762 690 to 19   AAA   672/679
(98 %)
2 diff
(99.8 %id)
DB248117 uterus .d 118 to 637 2 to 521   capped   520/520
(100 %)
2 diff
(99.7 %id)
DB260949 uterus .b 118 to 671 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB266371 uterus .b 118 to 686 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DB267938 uterus .b 122 to 682 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
W27353 eye, retina .d 1207 to 1623 433 to 17       417/433
(96 %)
0 diff
(100 %id)
AK130732 synovial membrane (knee) .o 1 to 548 7 to 554   tiling clone, available from FLJ, AAA This clone was ignored 553/553
(100 %)
1 diff
(99.9 %id)
AK297831 heart .b 120 to 668 2 to 550     Suspected internal deletion, this clone was ignored 549/549
(100 %)
1 diff
(99.9 %id)
DA171164 amygdala .b 124 to 666 2 to 547   capped Suspected internal deletion, this clone was ignored 546/546
(100 %)
3 diff
(99.5 %id)
BX364104   .b 109 to 656 2 to 550       549/549
(100 %)
2 diff
(99.7 %id)
DA533529 brain .h 2 to 554 2 to 556   capped Suspected internal deletion, this clone was ignored 555/569
(97 %)
13 diff
(97.8 %id)
AV653515 corresponding non cancerous liver tissue .h 1902 to 2396 495 to 1     Suspected internal deletion, this clone was ignored 495/510
(97 %)
11 diff
(97.9 %id)
AI080696 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1 to 362 1 to 364   tiling clone, Suspected internal deletion, this clone was ignored 364/366
(99 %)
9 diff
(97.6 %id)
BQ051746 blood, natural killer cells, cell line .a 2099 to 2670 569 to 1       569/572
(99 %)
18 diff
(96.9 %id)
DA710464   .b 118 to 835 2 to 722   capped Suspected internal deletion, this clone was ignored 721/726
(99 %)
13 diff
(98.3 %id)
TI_149299404   .b 2235 to 2762 527 to 1   AAA   527/531
(99 %)
4 diff
(99.3 %id)
DA737985   .b 121 to 850 2 to 730   capped   729/729
(100 %)
3 diff
(99.6 %id)
DB370600   .b 2225 to 2770 546 to 1       546/546
(100 %)
3 diff
(99.5 %id)
DA745093   .d 118 to 663 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA746168   .k 1 to 566 7 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA746677   .b 123 to 693 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
DA747999   .b 118 to 682 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA769768 brain .g 59 to 645 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA776953 brain .b 117 to 684 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA788745 brain .i 1 to 580 2 to 581 exact tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
DA789049 brain .b 109 to 694 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DA793694 brain .b 118 to 603 2 to 487   capped   486/486
(100 %)
0 diff
(100 %id)
DA795740 brain .b 125 to 677 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BP312857 mammary gland .c 21 to 613 1 to 593       593/593
(100 %)
3 diff
(99.5 %id)
BP312872 mammary gland .c 21 to 604 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
BP313464 mammary gland .c 21 to 603 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DA819279   .b 121 to 644 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DA822119 pericardium .b 125 to 697 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA825418 pericardium .b 123 to 693 2 to 573   capped   572/573
(99 %)
3 diff
(99.5 %id)
DA867987 Prostate .d 125 to 666 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA873983 Prostate .b 121 to 685 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA887917   .j 1 to 569 4 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA889735   .b 117 to 673 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BM772356 stomach .b 2149 to 2756 1 to 608       608/610
(99 %)
1 diff
(99.9 %id)
BM772403 stomach .b 2149 to 2748 1 to 600       600/600
(100 %)
0 diff
(100 %id)
BM822078 stomach .c 5 to 274 1 to 269       269/269
(100 %)
4 diff
(98.6 %id)
BM793386 Ascites, stomach .b 2289 to 2760 1 to 472       472/472
(100 %)
0 diff
(100 %id)
BM793386 Ascites, stomach .b 2289 to 2760 1 to 472       472/472
(100 %)
0 diff
(100 %id)
BM823664 Ascites, stomach .c 815 to 1313 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
BM823664 Ascites, stomach .c 815 to 1313 1 to 499       499/499
(100 %)
1 diff
(99.8 %id)
TI_1948242279   .c 211 to 383 132 to 304       173/201
(86 %)
6 diff
(97.1 %id)
TI_1948242280   .c 211 to 817 131 to 738       608/1493
(40 %)
10 diff
(99.4 %id)
TI_1948242545   .c 211 to 1133 139 to 1064       926/1380
(67 %)
26 diff
(98.2 %id)
TI_1948242546   .c 211 to 1133 127 to 1043       917/1373
(66 %)
29 diff
(97.9 %id)
TI_1948242547   .c 213 to 1136 1058 to 128       927/1283
(72 %)
27 diff
(97.9 %id)
TI_1948242548   .c 487 to 1136 772 to 122       651/1451
(44 %)
8 diff
(99.5 %id)
TI_1948242835   .c 211 to 370 132 to 291       160/188
(85 %)
9 diff
(95.3 %id)
TI_1948242836   .c 211 to 891 134 to 816       683/1394
(48 %)
34 diff
(97.6 %id)
TI_1948242838   .c 485 to 1136 778 to 126       653/1360
(48 %)
18 diff
(98.7 %id)
TI_1948243121   .c 211 to 396 127 to 312       186/213
(87 %)
6 diff
(97.2 %id)
TI_1948243122   .c 211 to 930 134 to 858       725/1443
(50 %)
17 diff
(98.9 %id)
TI_1948243124   .c 324 to 1136 945 to 123       822/1327
(61 %)
25 diff
(98.2 %id)
DA924769 small intestine .b 118 to 690 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BP346323 synovial membrane .b 127 to 706 1 to 580       580/581
(99 %)
3 diff
(99.5 %id)
DB002735 breast, tumor tissue .d 117 to 681 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DR006060 Prostate .c 105 to 663 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
BP358601 mammary gland .c 212 to 794 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BP358638 mammary gland .c 211 to 795 1 to 586       586/586
(100 %)
10 diff
(98.3 %id)
DB049041 testis .b 121 to 681 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DB056570 testis .g 118 to 544 2 to 428   capped   427/427
(100 %)
1 diff
(99.8 %id)
BP361791 thalamus .d 2079 to 2660 1 to 582   tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
DB109038 thymus .b 117 to 693 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB124157 thymus .b 125 to 694 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB142383 thymus .b 117 to 593 2 to 479   capped   478/478
(100 %)
2 diff
(99.6 %id)
BP365304 lung .d 1197 to 1779 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
TI_149313959   .b 1889 to 2762 939 to 86   AAA   854/954
(89 %)
24 diff
(97.5 %id)
TI_154111352   .b 1938 to 2762 875 to 62   AAA   814/940
(86 %)
16 diff
(98.3 %id)
TI_154127997   .b 2020 to 2770 830 to 86   AAA   745/943
(79 %)
16 diff
(98.4 %id)
TI_154195626   .b 78 to 709 65 to 702       636/1002
(63 %)
64 diff
(93.7 %id)
TI_154196874   .b 63 to 703 7 to 650       644/1102
(58 %)
32 diff
(97.1 %id)
TI_154197258   .b 78 to 868 94 to 886       697/1013
(68 %)
35 diff
(96.6 %id)
DC411468 kidney, tumor tissue .b 62 to 561 1 to 501       501/501
(100 %)
3 diff
(99.5 %id)
DC412094 kidney, tumor tissue .m 4 to 557 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DB180902 kidney, tumor tissue .b 121 to 676 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB189467 lung, tumor tissue .b 125 to 657 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DB205447 trachea .c 3 to 361 2 to 360   capped   359/359
(100 %)
1 diff
(99.8 %id)
DB210443 trachea .b 121 to 686 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
BM975658 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2365 to 2747 398 to 16   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 383/383
(100 %)
0 diff
(100 %id)
BM975658 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2365 to 2747 398 to 16   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 383/383
(100 %)
0 diff
(100 %id)
CB305777 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 1983 to 2762 791 to 19   AAA   773/775
(99 %)
7 diff
(99.1 %id)
CB305777 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 1983 to 2762 791 to 19   AAA   773/775
(99 %)
7 diff
(99.1 %id)
BM696582 eye, lens .b 2097 to 2693 1 to 597       597/597
(100 %)
0 diff
(100 %id)
BM696582 eye, lens .b 2097 to 2693 1 to 597       597/597
(100 %)
0 diff
(100 %id)
BM698751 eye, fetal eyes .b 1381 to 1867 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
BM698751 eye, fetal eyes .b 1381 to 1867 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
BU737204 eye, fetal eyes .b 2347 to 2775 447 to 19   AAA   429/439
(97 %)
0 diff
(100 %id)
BU737204 eye, fetal eyes .b 2347 to 2775 447 to 19   AAA   429/439
(97 %)
0 diff
(100 %id)
CA448384 Chondrosarcoma, Left Pubic Bone .b 2144 to 2762 637 to 19   AAA   619/619
(100 %)
0 diff
(100 %id)
CA448384 Chondrosarcoma, Left Pubic Bone .b 2144 to 2762 637 to 19   AAA   619/619
(100 %)
0 diff
(100 %id)
CA411898 Chondrosarcoma Grade II, Left Pelvis .b 2177 to 2904 746 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 728/728
(100 %)
3 diff
(99.6 %id)
CA411898 Chondrosarcoma Grade II, Left Pelvis .b 2177 to 2904 746 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 728/728
(100 %)
3 diff
(99.6 %id)
BU619497 Cell Line, Chondrosarcoma .b 2090 to 2770 698 to 19   AAA   680/687
(98 %)
1 diff
(99.9 %id)
BU619497 Cell Line, Chondrosarcoma .b 2090 to 2770 698 to 19   AAA   680/687
(98 %)
1 diff
(99.9 %id)
CB529715 Aveolar Macrophage, lung .b 2090 to 2762 690 to 19   AAA   672/679
(98 %)
2 diff
(99.8 %id)
CB529715 Aveolar Macrophage, lung .b 2090 to 2762 690 to 19   AAA   672/679
(98 %)
2 diff
(99.8 %id)
DB248117 uterus .d 118 to 637 2 to 521   capped   520/520
(100 %)
2 diff
(99.7 %id)
DB260949 uterus .b 118 to 671 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB266371 uterus .b 118 to 686 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DB267938 uterus .b 122 to 682 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
W27353 eye, retina .d 1207 to 1623 433 to 17       417/433
(96 %)
0 diff
(100 %id)
W27353 eye, retina .d 1207 to 1623 433 to 17       417/433
(96 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C