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Gene FAM172AandPOU5F2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
298 supporting clones for gene FAM172AandPOU5F2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK097970 thymus .c-u 6294 to 8420 1 to 2127   tiling clone, available from FLJ,   2127/2127
(100 %)
2 diff
(100.0 %id)
AK098546 testis .c-u 37 to 1331 1 to 1295 exact tiling clone, available from FLJ,   1295/1295
(100 %)
0 diff
(100 %id)
AK295127 brain .f 1 to 1352 1 to 1352 N15D tiling clone,   1352/1392
(97 %)
7 diff
(99.5 %id)
AK295879 hippocampus .e 52 to 1438 1 to 1390 exact tiling clone,   1390/1390
(100 %)
1 diff
(100.0 %id)
AK296683 tongue, tumor tissue .o 1 to 901 1 to 901 exact tiling clone,   901/901
(100 %)
0 diff
(100 %id)
AK296986 tongue, tumor tissue .b 24 to 1392 1 to 1369 exact tiling clone,   1369/1369
(100 %)
1 diff
(100.0 %id)
AK297471 brain .i 239 to 1269 1 to 1031 exact     1031/1031
(100 %)
0 diff
(100 %id)
AK309742   .q 172 to 1152 1 to 980 exact tiling clone,   980/980
(100 %)
1 diff
(99.9 %id)
AK312930 placenta .a 96 to 1458 1 to 1363 exact     1363/1363
(100 %)
0 diff
(100 %id)
AL136630 brain .g 1 to 982 9 to 990 E236V tiling clone, available from DKFZ, AAA   986/990
(99 %)
3 diff
(99.7 %id)
BP201305 amygdala .b 37 to 618 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
AW977952   .i 1167 to 1749 584 to 1     Submitted on the opposite strand 584/584
(100 %)
27 diff
(95.4 %id)
BG940862 blood .b 460 to 779 325 to 8   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 318/325
(97 %)
0 diff
(100 %id)
BG940863 blood .i 106 to 415 1 to 310       310/398
(77 %)
1 diff
(99.8 %id)
BC020584 Duodenum, adenocarcinoma .a 199 to 4374 1 to 4177 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 4177/4177
(100 %)
2 diff
(100.0 %id)
BC029532 testis .c-u 77 to 1331 1 to 1255 A2D available from MGC, AAA   1255/1255
(100 %)
1 diff
(100.0 %id)
BF845188 head_neck .i 1673 to 2198 526 to 3     Submitted on the opposite strand 524/526
(99 %)
0 diff
(100 %id)
BG209859   .i 1021 to 1782 1 to 758       758/766
(98 %)
20 diff
(97.4 %id)
DA073417 cerebellum .n-u 1 to 555 2 to 556 S99P tiling clone, capped   555/555
(100 %)
2 diff
(99.7 %id)
DA146073 amygdala .q 147 to 694 2 to 550 exact capped   549/549
(100 %)
1 diff
(99.9 %id)
DA149217 amygdala .i 1060 to 1536 2 to 479   capped   478/480
(99 %)
2 diff
(99.6 %id)
DA167529 amygdala .i 618 to 1177 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DC318062 amygdala .f 143 to 731 1 to 590       588/590
(99 %)
2 diff
(99.7 %id)
DA193169 amygdala .q 114 to 619 2 to 507 exact capped   506/506
(100 %)
0 diff
(100 %id)
DC320905 brain .e 96 to 563 1 to 469       469/469
(100 %)
2 diff
(99.6 %id)
DC322045 brain .p 86 to 451 1 to 365   tiling clone,   365/365
(100 %)
1 diff
(99.8 %id)
DC322985 brain .a 96 to 633 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DC324758 brain .f 1 to 592 1 to 592       592/592
(100 %)
2 diff
(99.7 %id)
DA298042 hippocampus .i 1599 to 2175 2 to 581   capped   580/580
(100 %)
3 diff
(99.5 %id)
DC333078 hippocampus .a 49 to 588 1 to 540       540/540
(100 %)
0 diff
(100 %id)
DC333523 hippocampus .a 46 to 596 1 to 551       551/551
(100 %)
2 diff
(99.7 %id)
DC333697 hippocampus .f 32 to 540 1 to 508       508/508
(100 %)
2 diff
(99.7 %id)
DC333894 hippocampus .a 29 to 579 1 to 551   tiling clone,   551/551
(100 %)
1 diff
(99.9 %id)
DC334483 hippocampus .e 91 to 646 1 to 556       556/556
(100 %)
0 diff
(100 %id)
DC335038 hippocampus .a 54 to 626 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC335415 hippocampus .a 96 to 669 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
DC336124 hippocampus .a 66 to 640 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC336147 hippocampus .e 52 to 629 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BX279883 brain .b 112 to 588 1 to 477       477/477
(100 %)
0 diff
(100 %id)
BX280740 duodenal adenocarcinoma, cell line, small intestine .a 199 to 669 1 to 471       471/471
(100 %)
0 diff
(100 %id)
BX641019 human uterus .c-u 517 to 6811 1 to 6293   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 6293/6293
(100 %)
7 diff
(99.9 %id)
C21572   .m 207 to 491 1 to 287       287/334
(85 %)
4 diff
(98.9 %id)
CD692442 normal nasopharynx .p 1 to 334 1 to 336   tiling clone,   336/336
(100 %)
3 diff
(99.2 %id)
DC344646 cervix .a 96 to 666 1 to 571       571/571
(100 %)
0 diff
(100 %id)
BX425619 neuroblastoma .m 1 to 1003 1 to 1002 P59H F60L V61F F62L N63T ... tiling clone,   1002/1002
(100 %)
4 diff
(99.7 %id)
CN289941 embryonic stem cells, DMSO-treated H9 cellline .i 729 to 1186 1 to 459       459/461
(99 %)
3 diff
(99.4 %id)
AL545682 placenta, Placenta Cot 25-normalized .q 149 to 1177 1 to 1023 A8X E13X Y17* tiling clone,   1023/1118
(91 %)
25 diff
(97.8 %id)
BX371535 Placenta Cot 25-normalized .i 1623 to 2522 909 to 18       892/910
(98 %)
0 diff
(100 %id)
BX427890 fetal liver, Liver .d 1018 to 1907 891 to 1   tiling clone, to resequence,   891/986
(90 %)
6 diff
(99.4 %id)
BX427891 fetal liver, Liver .d 37 to 981 1 to 942   tiling clone, to resequence,   942/951
(99 %)
5 diff
(99.5 %id)
CA389793 eye, RPE/choroid .i 1649 to 2175 1 to 527       527/527
(100 %)
8 diff
(98.5 %id)
DC345414 tongue, tumor tissue .o 1 to 516 1 to 516       516/516
(100 %)
0 diff
(100 %id)
DC348219 tongue, tumor tissue .b 24 to 572 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
CV023940 mixed .a 208 to 761 1 to 555       555/555
(100 %)
9 diff
(98.4 %id)
CV024707 mixed .c-u 149 to 799 1 to 647       647/651
(99 %)
8 diff
(98.8 %id)
CV348836 head_neck .va-u 1 to 537 1 to 536 C18A R20G V21S S22Q A23Q ... tiling clone,   536/536
(100 %)
8 diff
(98.6 %id)
DA472431   .i 843 to 1381 2 to 543   capped   542/543
(99 %)
2 diff
(99.7 %id)
DB314788   .i 2722 to 3261 542 to 1       542/542
(100 %)
4 diff
(99.3 %id)
AL134467 brain .i 1631 to 2223 1 to 593       593/593
(100 %)
0 diff
(100 %id)
BX642263   .s 1 to 723 1 to 724 exact tiling clone,   724/724
(100 %)
2 diff
(99.8 %id)
AL708240 human skeletal muscle .t 1 to 638 1 to 640 exact tiling clone,   640/640
(100 %)
5 diff
(99.3 %id)
DW417599 Liver .r 1 to 287 19 to 305 exact tiling clone,   288/305
(94 %)
1 diff
(99.7 %id)
DW457871 Liver .e 166 to 307 18 to 159       142/159
(89 %)
1 diff
(99.4 %id)
DC352125 brain .i 239 to 799 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DA521461 brain .q 105 to 656 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DA526489 brain .i 484 to 1056 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA526835 brain .q 113 to 688 2 to 580 E73V R74E T75R P76T S77P ... capped   579/579
(100 %)
2 diff
(99.7 %id)
FN060608 breast carcinoma .i 2128 to 2246 1 to 113       113/113
(100 %)
5 diff
(95.6 %id)
FN061491 breast carcinoma .i 2409 to 2522 1 to 114       114/115
(99 %)
1 diff
(99.2 %id)
FN081462 breast carcinoma .i 2409 to 2522 1 to 113       113/114
(99 %)
4 diff
(96.5 %id)
FN096275 breast carcinoma .i 518 to 631 1 to 114       114/114
(100 %)
0 diff
(100 %id)
FN172121 breast carcinoma .i 61 to 149 1 to 87       87/89
(97 %)
6 diff
(93.3 %id)
DB445717 testis .c-u 1 to 421 1 to 421   tiling clone,   421/423
(99 %)
5 diff
(98.9 %id)
DB510741 testis .c-u 1054 to 1369 1 to 316   AAA Submitted on the opposite strand 316/316
(100 %)
2 diff
(99.4 %id)
DB449260.
matches multiple genes
testis .vc 58 to 371 1 to 320   AAA also hits gene flawsnubu 320/320
(100 %)
8 diff
(97.5 %id)
DB451647 testis .c-u 77 to 577 1 to 501       501/501
(100 %)
1 diff
(99.9 %id)
DB517128 testis .c-u 893 to 1331 1 to 439     Submitted on the opposite strand 439/439
(100 %)
0 diff
(100 %id)
DB462940 hippocampus .a 293 to 774 1 to 483       483/483
(100 %)
1 diff
(99.8 %id)
DB464528.
matches multiple genes
hippocampus .vc 1 to 433 1 to 438 P6G R7E V10S I11*   also hits gene shysnubu 438/438
(100 %)
15 diff
(96.6 %id)
DB465209 hippocampus .vc 26 to 434 1 to 411       411/411
(100 %)
7 diff
(98.3 %id)
DB467479 hippocampus .vc 1 to 461 1 to 458 E53S L54S F55L N56I F57L ... tiling clone,   458/476
(96 %)
10 diff
(97.9 %id)
DB472604 hippocampus .vb 1 to 485 1 to 485 exact tiling clone,   485/485
(100 %)
0 diff
(100 %id)
DB472804 hippocampus .b 65 to 526 1 to 462       462/462
(100 %)
1 diff
(99.8 %id)
DB473243 hippocampus .a 293 to 767 1 to 475       475/475
(100 %)
0 diff
(100 %id)
DB478414.
matches multiple genes
hippocampus .a 65 to 531 1 to 467     also hits gene shysnubu 467/467
(100 %)
1 diff
(99.8 %id)
DB480051 hippocampus .i 65 to 259 1 to 195       195/195
(100 %)
0 diff
(100 %id)
DB481213 hippocampus .f 69 to 499 1 to 431       431/431
(100 %)
0 diff
(100 %id)
DB481268 hippocampus .vc 1 to 438 1 to 438 exact tiling clone,   438/438
(100 %)
1 diff
(99.8 %id)
DB483091 hippocampus .q 130 to 617 1 to 488 exact     488/488
(100 %)
1 diff
(99.8 %id)
DB489489 hypothalamus .q 113 to 578 1 to 468 Q30S L31S P32L E33K A34P ...     468/468
(100 %)
7 diff
(98.6 %id)
DB497583 hypothalamus .q 113 to 623 1 to 511 exact     511/511
(100 %)
1 diff
(99.9 %id)
DB568683 hypothalamus .i 1292 to 1793 1 to 504     Submitted on the opposite strand 504/504
(100 %)
3 diff
(99.5 %id)
BY797080 eye .b 51 to 678 1 to 628       628/628
(100 %)
0 diff
(100 %id)
T73757 Liver .i 2127 to 2447 14 to 344       331/344
(96 %)
5 diff
(98.6 %id)
T73764 Liver .i 2118 to 2429 1 to 316       316/316
(100 %)
8 diff
(97.5 %id)
AA576409 breast, breast tumor .b 429 to 830 407 to 6       402/407
(98 %)
0 diff
(100 %id)
AA770478 pooled .i 1437 to 1769 334 to 1       334/334
(100 %)
6 diff
(98.3 %id)
AA811351 germinal center B cell .i 1314 to 1804 494 to 1       494/494
(100 %)
12 diff
(97.6 %id)
AA938719 germinal center B cell .i 1408 to 1804 398 to 1       398/398
(100 %)
7 diff
(98.3 %id)
AA806375 germinal center B cell .i 1320 to 1804 486 to 1       486/486
(100 %)
13 diff
(97.4 %id)
AI017211 pooled .i 1347 to 1795 450 to 1       450/450
(100 %)
1 diff
(99.8 %id)
AI224844 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .i 1728 to 2181 454 to 1       454/454
(100 %)
0 diff
(100 %id)
AI350662   .i 2070 to 2370 301 to 1       301/303
(99 %)
0 diff
(100 %id)
AW628639 pooled .i 1485 to 1795 314 to 1       314/314
(100 %)
3 diff
(99.1 %id)
BE535982 cervix .i 1298 to 1870 1 to 570       570/833
(68 %)
51 diff
(93.9 %id)
BE780096 eye, retinoblastoma .q 197 to 413 1 to 218       218/218
(100 %)
4 diff
(98.2 %id)
BE891701 melanotic melanoma, skin .a 280 to 775 1 to 493       493/914
(53 %)
8 diff
(99.2 %id)
BF979742 testis .c-u 22 to 721 1 to 695   fully sequenced,   695/695
(100 %)
14 diff
(98.0 %id)
BF980039 testis .c-u 691 to 1265 684 to 73   fully sequenced,   612/684
(89 %)
61 diff
(91.1 %id)
BF966420 brain, hippocampus .a 60 to 734 1 to 668       668/891
(74 %)
20 diff
(97.8 %id)
BF983923 duodenal adenocarcinoma, cell line, small intestine .a 199 to 775 12 to 587       576/939
(61 %)
8 diff
(99.2 %id)
BG389642 embryonal carcinoma, cell line, testis .b 94 to 654 1 to 561       561/631
(88 %)
2 diff
(99.7 %id)
BC012007 Testis, embryonal carcinoma .i 1318 to 2817 1 to 1503   available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 1503/1503
(100 %)
2 diff
(99.9 %id)
BG392222 embryonal carcinoma, cell line, testis .i 1319 to 1924 1 to 610   available from MGC,   610/610
(100 %)
12 diff
(98.1 %id)
BI754123 brain .b 81 to 833 1 to 754       754/763
(98 %)
6 diff
(99.3 %id)
BI909147 leukocyte .i 861 to 1628 1 to 778       778/869
(89 %)
16 diff
(98.2 %id)
BI916568 brain .q 206 to 912 1 to 707 exact     707/707
(100 %)
0 diff
(100 %id)
BI559739 testis .c-u 72 to 896 1 to 824       824/826
(99 %)
13 diff
(98.5 %id)
BI601121 brain, hypothalamus .q 109 to 874 1 to 764 exact     764/981
(77 %)
11 diff
(98.9 %id)
BM463668 leiomyosarcoma, uterus .i 1014 to 1864 79 to 940       862/1038
(83 %)
32 diff
(97.0 %id)
BM801927 duodenal adenocarcinoma, cell line, small intestine .q 128 to 928 1 to 811 exact tiling clone,   811/989
(82 %)
9 diff
(99.1 %id)
BM555117 duodenal adenocarcinoma, cell line, small intestine .q 134 to 1126 1 to 1021 exact     1021/1064
(95 %)
40 diff
(96.3 %id)
BQ271435 Pancreas, Purified pancreatic islet .i 1739 to 2139 1 to 400       400/400
(100 %)
6 diff
(98.5 %id)
BU160451 melanotic melanoma, skin .i 1093 to 1775 1 to 696       696/960
(72 %)
29 diff
(97.0 %id)
BQ428058 leiomyosarcoma, uterus .q 1 to 567 1 to 575 E73V R74Q T75R P76T S77P ... tiling clone,   571/944
(60 %)
25 diff
(97.4 %id)
BQ720126 sympathetic trunk .i 714 to 1551 1 to 850       850/953
(89 %)
20 diff
(98.0 %id)
BQ709766 Spleen .c-u 6828 to 7713 1 to 894   tiling clone,   894/927
(96 %)
19 diff
(98.0 %id)
CB995721 placenta, pre-eclamptic placenta .a 65 to 763 28 to 736       709/840
(84 %)
23 diff
(97.3 %id)
TI_57219094   .b 76 to 833 54 to 811       758/820
(92 %)
12 diff
(98.6 %id)
TI_57236711   .i 861 to 1628 31 to 808       778/899
(86 %)
22 diff
(97.6 %id)
TI_57240033   .q 202 to 912 28 to 739 exact     712/739
(96 %)
6 diff
(99.2 %id)
TI_45214245   .q 115 to 874 87 to 844 exact     758/1061
(71 %)
15 diff
(98.6 %id)
TI_44347999   .c-u 77 to 896 93 to 911       819/913
(89 %)
11 diff
(98.8 %id)
CB141470 Liver .b 228 to 698 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
BP290594 lung .i 1757 to 2123 1 to 365       365/554
(65 %)
10 diff
(98.2 %id)
BP293839 lung .i 1829 to 2389 1 to 561       561/561
(100 %)
4 diff
(99.3 %id)
AV761918 bone marrow .c-u 6437 to 6833 1 to 398   tiling clone,   398/503
(79 %)
5 diff
(99.1 %id)
NM_032042.5   .a 1 to 4720 1 to 4720 exact RefSeq,   4720/4720
(100 %)
0 diff
(100 %id)
NM_153216.1   .c-u 37 to 1331 1 to 1295 exact RefSeq,   1295/1295
(100 %)
0 diff
(100 %id)
NM_001163417.1   .b 1 to 4596 1 to 4596 exact RefSeq,   4596/4596
(100 %)
0 diff
(100 %id)
NM_001163418.1   .e 1 to 4404 1 to 4404 exact RefSeq,   4404/4404
(100 %)
0 diff
(100 %id)
AV749691 Pituitary .p 100 to 447 1 to 339   tiling clone,   339/343
(98 %)
11 diff
(96.8 %id)
NR_028080.1   .i 1 to 4427 1 to 4427 exact RefSeq, tiling clone,   4427/4427
(100 %)
0 diff
(100 %id)
DC367836   .k 1 to 561 1 to 561 exact tiling clone,   561/561
(100 %)
0 diff
(100 %id)
DA709749   .q 144 to 695 2 to 557 H3A R4P P5D S6R R7H ... capped   556/556
(100 %)
8 diff
(98.6 %id)
DA758305   .q 173 to 714 2 to 543 exact capped   542/542
(100 %)
0 diff
(100 %id)
DC372675   .a 169 to 669 1 to 502       500/502
(99 %)
3 diff
(99.5 %id)
DC374283 brain .f 16 to 591 1 to 576   tiling clone,   576/576
(100 %)
0 diff
(100 %id)
DC376817 brain .u 1 to 564 4 to 568 V59C V60C R61Q A62G G63R ... tiling clone,   568/568
(100 %)
2 diff
(99.7 %id)
DA798808 brain .h 1 to 534 2 to 537   tiling clone, capped   536/536
(100 %)
2 diff
(99.7 %id)
DC376842 brain .u 1 to 535 4 to 539       539/539
(100 %)
2 diff
(99.7 %id)
DA802666 brain .b 636 to 1181 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA807790 brain .f 394 to 986 2 to 599   capped   598/598
(100 %)
6 diff
(99.0 %id)
DC382654 placenta .a 96 to 689 1 to 594       594/594
(100 %)
0 diff
(100 %id)
CR992522 T-Lymphocytes .j 1 to 879 1 to 878 C231X tiling clone,   878/878
(100 %)
4 diff
(99.6 %id)
TI_1948093543   .a 208 to 775 135 to 704       570/1405
(40 %)
13 diff
(99.1 %id)
TI_1948093700   .a 201 to 775 123 to 698       576/1232
(46 %)
7 diff
(99.5 %id)
TI_1948093861   .a 208 to 979 136 to 913       778/1287
(60 %)
29 diff
(97.8 %id)
TI_1948094029   .a 208 to 775 126 to 693       568/1380
(41 %)
7 diff
(99.5 %id)
TI_1948094030   .a 988 to 1454 603 to 137       467/1487
(31 %)
8 diff
(99.5 %id)
TI_1948103567   .c-u 317 to 1062 879 to 126       754/1119
(67 %)
0 diff
(100 %id)
TI_1948103703   .c-u 498 to 1062 687 to 121       567/1278
(44 %)
0 diff
(100 %id)
TI_1948103843   .c-u 142 to 885 131 to 879       749/1297
(57 %)
23 diff
(98.3 %id)
TI_1948103981   .c-u 142 to 1061 127 to 1054   fully sequenced,   928/1054
(88 %)
36 diff
(96.6 %id)
TI_1948103982   .c-u 447 to 1067 748 to 120   fully sequenced,   629/748
(84 %)
15 diff
(98.0 %id)
BP339019 Spleen .i 1267 to 1745 1 to 477       477/583
(81 %)
15 diff
(97.5 %id)
DA995031 synovial membrane tissue from rheumatioidarthritis .i 950 to 1481 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DN993480 brain, whole brain .a 76 to 705 9 to 638       630/638
(98 %)
6 diff
(99.1 %id)
DB113643 thymus .c-u 6295 to 6897 2 to 605   capped   604/604
(100 %)
1 diff
(99.9 %id)
DB343502 thymus .c-u 7906 to 8420 515 to 1       515/515
(100 %)
0 diff
(100 %id)
DB130736 thymus .h 504 to 1059 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DC408309 thymus .a 54 to 589 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DC408669 thymus .d 1 to 555 1 to 555   tiling clone,   555/555
(100 %)
0 diff
(100 %id)
DB159620 thymus .b 405 to 988 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB161301 thymus .i 846 to 1411 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
TI_149312189   .b 77 to 779 786 to 86   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 701/1033
(67 %)
3 diff
(99.8 %id)
TI_154111319   .l 1 to 755 767 to 13 G3V S4L P5L E6K E7N ... tiling clone,   755/1001
(75 %)
2 diff
(99.9 %id)
BP369993 testis .c-u 37 to 591 1 to 555       555/555
(100 %)
11 diff
(98.1 %id)
BU689532 lung .b 115 to 772 658 to 1       658/658
(100 %)
8 diff
(98.8 %id)
DB267194 uterus .i 1562 to 2150 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DC422868 uterus .a 54 to 600 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DB282255 uterus .i 608 to 1151 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DC423175 uterus .b 37 to 581 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
DC423235 uterus .b 29 to 564 1 to 536   tiling clone,   536/536
(100 %)
0 diff
(100 %id)
DC423756 uterus .a 30 to 611 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
Z21965 skeletal muscle .c-u 577 to 838 1 to 262       262/262
(100 %)
0 diff
(100 %id)
AA328689   .i 1267 to 1745 1 to 477       477/583
(81 %)
15 diff
(97.5 %id)
AA333100 Embryo, 8 weeks .i 950 to 1481 2 to 533       532/532
(100 %)
0 diff
(100 %id)
AV709489 adrenal gland .a 76 to 705 9 to 638     Suspected internal deletion, this clone was ignored 630/638
(98 %)
6 diff
(99.1 %id)
AF070617 brain .a 76 to 705 9 to 638   AAA   630/638
(98 %)
6 diff
(99.1 %id)
AW956055   .c-u 6295 to 6897 2 to 605       604/604
(100 %)
1 diff
(99.9 %id)
AW958085   .c-u 7906 to 8420 515 to 1       515/515
(100 %)
0 diff
(100 %id)
AW961395   .h 504 to 1059 2 to 557   tiling clone,   556/556
(100 %)
0 diff
(100 %id)
BX107074 parathyroid gland, parathyroid tumor .a 54 to 589 1 to 536       536/536
(100 %)
0 diff
(100 %id)
CR605117 Placenta Cot 25-normalized .d 1 to 555 1 to 555   tiling clone,   555/555
(100 %)
0 diff
(100 %id)
CR743651   .b 405 to 988 2 to 585       584/584
(100 %)
0 diff
(100 %id)
AL571301 placenta, Placenta Cot 25-normalized .i 846 to 1411 2 to 567       566/566
(100 %)
1 diff
(99.9 %id)
AL599880   .b 77 to 779 786 to 86       701/1033
(67 %)
3 diff
(99.8 %id)
AL599881   .l 1 to 755 767 to 13   tiling clone,   755/1001
(75 %)
2 diff
(99.9 %id)
AL042965 testis .c-u 37 to 591 1 to 555       555/555
(100 %)
11 diff
(98.1 %id)
AL036489 brain .b 115 to 772 658 to 1     This clone was ignored 658/658
(100 %)
8 diff
(98.8 %id)
AL036490 brain .i 1562 to 2150 2 to 591     This clone was ignored 590/590
(100 %)
1 diff
(99.9 %id)
AL353958 amygdala .a 54 to 600 1 to 547       547/547
(100 %)
0 diff
(100 %id)
AL353959 amygdala .i 608 to 1151 2 to 546       545/545
(100 %)
1 diff
(99.9 %id)
FN062412 breast carcinoma .b 37 to 581 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
DB528416 hippocampus .b 29 to 564 1 to 536   tiling clone, Submitted on the opposite strand 536/536
(100 %)
0 diff
(100 %id)
DB528631 hippocampus .a 30 to 611 1 to 581     Submitted on the opposite strand 581/581
(100 %)
1 diff
(99.9 %id)
DB530511 hippocampus .c-u 577 to 838 1 to 262     Submitted on the opposite strand 262/262
(100 %)
0 diff
(100 %id)
DB531747 hippocampus Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
DB534490 hippocampus Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
DB541362 hippocampus Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
DB541549 hippocampus Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
DB542014 hippocampus Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
DB548782 hippocampus Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
DB550084 hippocampus Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
DB551975 hippocampus Gene FAM172AandPOU5F2, variant not shown       AAA Submitted on the opposite strand    
DB558872 hypothalamus Gene FAM172AandPOU5F2, variant not shown       AAA Submitted on the opposite strand    
DB559027 hypothalamus Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
BP396221 pancreatic islet Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
BP257215 heart Gene FAM172AandPOU5F2, variant not shown              
BP398089 pancreatic islet Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
T80494 whole brain Gene FAM172AandPOU5F2, variant not shown              
R38851 whole brain Gene FAM172AandPOU5F2, variant not shown       AAA      
H12050 whole brain Gene FAM172AandPOU5F2, variant not shown              
H12051 whole brain Gene FAM172AandPOU5F2, variant not shown       AAA      
H38443 brain Gene FAM172AandPOU5F2, variant not shown              
H38477 brain Gene FAM172AandPOU5F2, variant not shown              
H99444 melanocyte Gene FAM172AandPOU5F2, variant not shown              
H99445 melanocyte Gene FAM172AandPOU5F2, variant not shown              
N63467 multiple sclerosis lesions Gene FAM172AandPOU5F2, variant not shown              
N94760 multiple sclerosis lesions Gene FAM172AandPOU5F2, variant not shown              
N63477 multiple sclerosis lesions Gene FAM172AandPOU5F2, variant not shown              
N94775 multiple sclerosis lesions Gene FAM172AandPOU5F2, variant not shown              
N62933 multiple sclerosis lesions Gene FAM172AandPOU5F2, variant not shown              
W01193 multiple sclerosis lesions Gene FAM172AandPOU5F2, variant not shown              
W16500 lung Gene FAM172AandPOU5F2, variant not shown              
W15296 parathyroid gland, parathyroid tumor Gene FAM172AandPOU5F2, variant not shown              
W39313 parathyroid gland, parathyroid tumor Gene FAM172AandPOU5F2, variant not shown              
AA129634 lung, lung carcinoma Gene FAM172AandPOU5F2, variant not shown              
AA133896 lung, lung carcinoma Gene FAM172AandPOU5F2, variant not shown              
AA522762 metastatic prostate bone lesion Gene FAM172AandPOU5F2, variant not shown              
AA603316 normal prostate, Prostate Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
AA639221 Ewing's sarcoma Gene FAM172AandPOU5F2, variant not shown              
AA731904 germinal center B cell Gene FAM172AandPOU5F2, variant not shown       AAA      
AA729720 alveolar rhabdomyosarcoma Gene FAM172AandPOU5F2, variant not shown              
AA903812 leiomyosarcoma, soft tissue Gene FAM172AandPOU5F2, variant not shown              
AA912410 pooled Gene FAM172AandPOU5F2, variant not shown              
AA939280 pooled germ cell tumors Gene FAM172AandPOU5F2, variant not shown              
AA947660 pooled germ cell tumors Gene FAM172AandPOU5F2, variant not shown              
AI051733   Gene FAM172AandPOU5F2, variant not shown              
AI095685 uterus Gene FAM172AandPOU5F2, variant not shown       AAA      
AI095910 uterus Gene FAM172AandPOU5F2, variant not shown       AAA      
AI139910   Gene FAM172AandPOU5F2, variant not shown              
AI200153 placenta Gene FAM172AandPOU5F2, variant not shown              
AI868466 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene FAM172AandPOU5F2, variant not shown              
AI868565 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene FAM172AandPOU5F2, variant not shown              
AI434236 lymph node, lymphoma, follicular mixed small and largecell Gene FAM172AandPOU5F2, variant not shown              
AI554298 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus Gene FAM172AandPOU5F2, variant not shown              
AI637652 pooled germ cell tumors Gene FAM172AandPOU5F2, variant not shown              
AI685452 Prostate Gene FAM172AandPOU5F2, variant not shown       AAA      
AI675508 Prostate Gene FAM172AandPOU5F2, variant not shown              
AI808271 pooled Gene FAM172AandPOU5F2, variant not shown              
AI888506 poorly differentiated adenocarcinoma withsignet ring cell features, stomach Gene FAM172AandPOU5F2, variant not shown              
AI927701 Kidney Gene FAM172AandPOU5F2, variant not shown              
AW022679 cochlea, ear Gene FAM172AandPOU5F2, variant not shown              
AI983620 adenocarcinoma, Pancreas Gene FAM172AandPOU5F2, variant not shown              
AW015345   Gene FAM172AandPOU5F2, variant not shown              
AW473080 lymph node, lymphoma, follicular mixed small and largecell Gene FAM172AandPOU5F2, variant not shown       AAA      
AW518893 adenocarcinoma, Pancreas Gene FAM172AandPOU5F2, variant not shown              
AW594592 pooled germ cell tumors Gene FAM172AandPOU5F2, variant not shown              
AW772138 Kidney Gene FAM172AandPOU5F2, variant not shown              
CF134892 CNCAP(3)T-225 cell line, Prostate Gene FAM172AandPOU5F2, variant not shown              
CB052433 leiomyosarcoma, soft tissue Gene FAM172AandPOU5F2, variant not shown              
CB052434 leiomyosarcoma, soft tissue Gene FAM172AandPOU5F2, variant not shown              
CB054071 brain, glioblastoma (pooled) Gene FAM172AandPOU5F2, variant not shown       fully sequenced, AAA      
CB054072 brain, glioblastoma (pooled) Gene FAM172AandPOU5F2, variant not shown       fully sequenced,      
BF445124 carcinoid, lung Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
BG054651 Kidney Gene FAM172AandPOU5F2, variant not shown       AAA      
BF434875 Kidney Gene FAM172AandPOU5F2, variant not shown              
BF223631 carcinoid, lung Gene FAM172AandPOU5F2, variant not shown              
BE620151 large cell carcinoma, undifferentiated, lung Gene FAM172AandPOU5F2, variant not shown              
BE620579 large cell carcinoma, undifferentiated, lung Gene FAM172AandPOU5F2, variant not shown              
BF984760 duodenal adenocarcinoma, cell line, small intestine Gene FAM172AandPOU5F2, variant not shown              
BG118787 adenocarcinoma, cell line, Liver Gene FAM172AandPOU5F2, variant not shown       AAA      
BG431121 Kidney Gene FAM172AandPOU5F2, variant not shown              
BM995314 Chondrosarcoma, Left Pubic Bone Gene FAM172AandPOU5F2, variant not shown       AAA      
BQ014673 Chondrosarcoma, Left Pubic Bone Gene FAM172AandPOU5F2, variant not shown       AAA      
BQ002473 Chondrosarcoma, Left Pelvis Gene FAM172AandPOU5F2, variant not shown       AAA      
CB215800 normal endometrium, late proliferativephase, cycle day 13, uterus Gene FAM172AandPOU5F2, variant not shown              
BQ632481 Pancreas, Purified pancreatic islet Gene FAM172AandPOU5F2, variant not shown              
BQ632770 Pancreas, Purified pancreatic islet Gene FAM172AandPOU5F2, variant not shown              
BQ929402 leiomyosarcoma, uterus Gene FAM172AandPOU5F2, variant not shown              
BU536542 mixed (pool of 40 RNAs) Gene FAM172AandPOU5F2, variant not shown       AAA      
BP289213 lung Gene FAM172AandPOU5F2, variant not shown              
AV746857 Pituitary Gene FAM172AandPOU5F2, variant not shown              
DB374047 placenta Gene FAM172AandPOU5F2, variant not shown              
DA830264 placenta Gene FAM172AandPOU5F2, variant not shown       capped      
DB375355 placenta Gene FAM172AandPOU5F2, variant not shown              
BM789633 stomach Gene FAM172AandPOU5F2, variant not shown              
BP343069 stomach mucosa Gene FAM172AandPOU5F2, variant not shown              
BM145006 leukopheresis Gene FAM172AandPOU5F2, variant not shown              
TI_149302125   Gene FAM172AandPOU5F2, variant not shown       AAA      
TI_149305356   Gene FAM172AandPOU5F2, variant not shown              
TI_149310934   Gene FAM172AandPOU5F2, variant not shown       AAA      
TI_154162999   Gene FAM172AandPOU5F2, variant not shown              
BU685633 lung, Primary Lung Epithelial Cells Gene FAM172AandPOU5F2, variant not shown              
BU689105 lung Gene FAM172AandPOU5F2, variant not shown       AAA      
BM980381 lung, Primary Lung Cystic Fibrosis EpithelialCells Gene FAM172AandPOU5F2, variant not shown       AAA      
CA313260 Human Lung Epithelial cells, lung Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
CA314421 Human Lung Epithelial cells, lung Gene FAM172AandPOU5F2, variant not shown       AAA Submitted on the opposite strand    
CA503121 Human Lung Epithelial cells, lung Gene FAM172AandPOU5F2, variant not shown       AAA Submitted on the opposite strand    
CB242911 Human Lung Epithelial cells, lung Gene FAM172AandPOU5F2, variant not shown       AAA      
BM676590 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene FAM172AandPOU5F2, variant not shown       fully sequenced, AAA      
BM714214 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene FAM172AandPOU5F2, variant not shown       fully sequenced,      
BQ185662 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
BQ188207 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene FAM172AandPOU5F2, variant not shown         Submitted on the opposite strand    
BQ186863 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene FAM172AandPOU5F2, variant not shown       AAA      
CK299965 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene FAM172AandPOU5F2, variant not shown              
TI_151753615   Gene FAM172AandPOU5F2, variant not shown              
Z19775   Gene FAM172AandPOU5F2, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p, .q, .r, .s, .t, .u, .va-u, .vb, .vc Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC