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Gene CPT2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
258 supporting clones for gene CPT2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA003908   .a 454 to 1005 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
AK223052   .a 758 to 2820 1 to 2063   AAA Possibly primed on the genome, locally A rich (22/24 A in genome downstream of last aligned base) 2063/2063
(100 %)
6 diff
(99.8 %id)
AK312687   .a 397 to 2492 1 to 2096 exact     2096/2096
(100 %)
1 diff
(100.0 %id)
DA025407   .a 399 to 972 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA027611   .a 410 to 968 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BC002445 Skin, melanotic melanoma. .a 392 to 2820 1 to 2429 S113L V368I M647V available from MGC, AAA Possibly primed on the genome, locally A rich (22/24 A in genome downstream of last aligned base) 2429/2429
(100 %)
3 diff
(99.9 %id)
BC005172 Uterus, endometrium adenocarcinoma .a 392 to 2820 1 to 2429   available from MGC, AAA Possibly primed on the genome, locally A rich (22/24 A in genome downstream of last aligned base) 2429/2429
(100 %)
3 diff
(99.9 %id)
BE093354 breast .a 708 to 1001 1 to 294       294/294
(100 %)
7 diff
(97.7 %id)
BE440189 Trabecular meshwork .b 1068 to 1440 1 to 374       374/374
(100 %)
5 diff
(98.7 %id)
BE762833 nervous_tumor .a 894 to 1141 1 to 246       246/246
(100 %)
1 diff
(99.6 %id)
BE765274 nervous_tumor .a 703 to 940 238 to 1       238/240
(99 %)
4 diff
(98.4 %id)
BE925038 amnion_normal .a 970 to 1202 1 to 233       233/249
(93 %)
11 diff
(95.6 %id)
BF336195 colon .a 837 to 1100 270 to 6       265/270
(98 %)
0 diff
(100 %id)
BF754960 colon .b 1111 to 1471 1 to 363       363/375
(96 %)
10 diff
(97.4 %id)
BI335912 skin .a 1339 to 1793 1 to 455       455/455
(100 %)
1 diff
(99.8 %id)
DA039033 bladder .a 400 to 951 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA042930 bladder .a 373 to 921 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AV757087 bone marrow .b 872 to 1143 90 to 361   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 272/288
(94 %)
0 diff
(100 %id)
DA047752   .a 424 to 809 2 to 387   capped   386/386
(100 %)
0 diff
(100 %id)
DA050796   .a 424 to 985 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA080079 cerebellum .a 400 to 894 2 to 497   capped   496/496
(100 %)
3 diff
(99.4 %id)
DA151977 amygdala .a 400 to 985 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA252345 caudate nucleus .a 1042 to 1635 2 to 595   capped   594/594
(100 %)
3 diff
(99.5 %id)
DA310702 hippocampus .a 765 to 1340 2 to 577   capped   576/577
(99 %)
1 diff
(99.9 %id)
DA389612 thalamus .a 399 to 968 2 to 571   capped   570/571
(99 %)
1 diff
(99.9 %id)
BF727372 eye, lens .b 405 to 848 1 to 444       444/444
(100 %)
4 diff
(99.1 %id)
CD698715 normal nasopharynx .a 1459 to 1838 26 to 405       380/405
(93 %)
6 diff
(98.6 %id)
CN291075 embryonic stem cells, DMSO-treated H9 cellline .a 649 to 1116 1 to 468       468/468
(100 %)
0 diff
(100 %id)
CN291076 embryonic stem cells, cell lines H1, H7, andH9 .a 1290 to 1902 13 to 625       613/625
(98 %)
6 diff
(99.1 %id)
CN291077 embryonic stem cells, cell lines H1, H7, andH9 .a 412 to 805 1 to 394       394/394
(100 %)
0 diff
(100 %id)
CN291078 embryonic stem cells, cell lines H1, H7, andH9 .a 374 to 531 1 to 160       160/160
(100 %)
5 diff
(96.9 %id)
CN291079 embryonic stem cells, cell lines H1, H7, andH9 .a 1243 to 1858 49 to 664       616/664
(92 %)
6 diff
(99.1 %id)
CN291080 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 472 to 840 1 to 369       369/369
(100 %)
0 diff
(100 %id)
CR598552 B cells (Ramos cell line) Cot 25-normalized .a 417 to 3057 1 to 2641 exact tiling clone,   2641/2641
(100 %)
0 diff
(100 %id)
BX436051 T cells (Jurkat cell line) .b 239 to 1129 895 to 1       895/896
(99 %)
25 diff
(97.3 %id)
BX445772 T cells (Jurkat cell line) .b 43 to 1091 1046 to 4       1043/1081
(96 %)
17 diff
(98.5 %id)
BX445773 T cells (Jurkat cell line) .a 378 to 1413 1 to 1027       1027/1027
(100 %)
15 diff
(98.6 %id)
BX462692 T cells (Jurkat cell line) .a 378 to 1038 1 to 659       659/659
(100 %)
6 diff
(99.1 %id)
BX336655 Placenta Cot 25-normalized .a 2035 to 3036 1001 to 1       1001/1124
(89 %)
26 diff
(97.7 %id)
BX336656 Placenta Cot 25-normalized .a 387 to 724 12 to 348       337/348
(96 %)
16 diff
(95.5 %id)
BX337849 Placenta Cot 25-normalized .a 410 to 1178 17 to 783       766/783
(97 %)
11 diff
(98.6 %id)
BX398043 Placenta Cot 25-normalized .a 2252 to 3058 805 to 1       805/805
(100 %)
13 diff
(98.4 %id)
BX363919   .a 2032 to 3050 1021 to 1       1021/1021
(100 %)
4 diff
(99.7 %id)
BX363920   .a 417 to 1375 1 to 959       959/959
(100 %)
5 diff
(99.5 %id)
BX372303   .a 1276 to 2160 881 to 1       881/884
(99 %)
13 diff
(98.6 %id)
BX386798   .a 2077 to 3057 983 to 1       983/983
(100 %)
5 diff
(99.5 %id)
BX386799   .a 417 to 1396 1 to 977       977/977
(100 %)
4 diff
(99.6 %id)
BX390948   .a 1226 to 2127 1 to 900       900/901
(99 %)
15 diff
(98.4 %id)
BX406445 fetal liver, Liver .a 410 to 1325 1 to 911       911/911
(100 %)
33 diff
(96.4 %id)
CA395055 eye, RPE/choroid .a 630 to 911 1 to 282       282/282
(100 %)
7 diff
(97.6 %id)
DA450081 tongue, tumor tissue .a 401 to 963 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA467348 cord Blood .a 419 to 761 2 to 344   capped   343/343
(100 %)
0 diff
(100 %id)
D12096 Liver .b 1022 to 1138 1 to 118       118/123
(95 %)
2 diff
(98.4 %id)
DA476612   .a 424 to 987 2 to 565   capped   564/565
(99 %)
1 diff
(99.9 %id)
AL041298 testis .a 529 to 1259 1 to 731       731/731
(100 %)
3 diff
(99.6 %id)
AL041337 testis .a 523 to 834 66 to 378       313/381
(82 %)
7 diff
(98.2 %id)
DA481636   .a 417 to 984 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA495390 brain .a 380 to 897 2 to 519   capped   518/518
(100 %)
1 diff
(99.9 %id)
DA497784 brain .a 381 to 947 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA514682 brain .a 383 to 939 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
FN092933 breast carcinoma .b 1396 to 1469 1 to 74       74/75
(98 %)
1 diff
(98.7 %id)
FN109573 breast carcinoma .b 1284 to 1344 1 to 61       61/62
(98 %)
1 diff
(98.4 %id)
FN162522 breast carcinoma .b 1052 to 1138 1 to 88       88/99
(88 %)
4 diff
(96.0 %id)
D56299   .b 1 to 227 1 to 226   tiling clone,   226/226
(100 %)
1 diff
(99.6 %id)
AV686683 hepatocellular carcinoma .b 219 to 581 1 to 354   tiling clone,   354/356
(99 %)
7 diff
(98.1 %id)
DB453042 testis .a 345 to 837 1 to 494       494/494
(100 %)
6 diff
(98.8 %id)
DB534353.
matches multiple genes
hippocampus .b 1085 to 1489 405 to 1   tiling clone, also hits gene MAGOHandC1orf123 405/405
(100 %)
6 diff
(98.6 %id)
DB556111.
matches multiple genes
hypothalamus .b 1050 to 1500 453 to 1   tiling clone, also hits gene MAGOHandC1orf123 453/453
(100 %)
10 diff
(97.8 %id)
BP236171 coronary artery .a 1131 to 1726 1 to 595       595/595
(100 %)
4 diff
(99.4 %id)
BQ640769 eye, retina .a 1764 to 2278 1 to 515       515/517
(99 %)
9 diff
(98.3 %id)
DA565989 heart .a 419 to 974 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
BP243715 Liver .a 399 to 969 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DA586815 lung .a 400 to 937 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BJ994295 hepatoblastoma .b 488 to 859 373 to 1       373/373
(100 %)
13 diff
(96.6 %id)
W58236.
matches multiple genes
heart .b 839 to 1143 305 to 1     also hits gene smerbla 305/390
(78 %)
2 diff
(99.5 %id)
AA758131 pineal gland .b 387 to 876 490 to 1       490/490
(100 %)
0 diff
(100 %id)
AA179662 brain, neuroepithelial cells .a 416 to 760 1 to 352       352/369
(95 %)
22 diff
(94.1 %id)
AA179663 brain, neuroepithelial cells .a 2404 to 2826 425 to 3       423/425
(99 %)
0 diff
(100 %id)
AA531596 invasive prostate tumor, Prostate .b 473 to 851 68 to 442       375/444
(84 %)
19 diff
(95.8 %id)
AA641442 epithelium (cell line), Prostate .b 289 to 595 308 to 1       308/308
(100 %)
7 diff
(97.8 %id)
AA747628 Ewing's sarcoma .b 1047 to 1402 9 to 364       356/364
(97 %)
6 diff
(98.4 %id)
AI365625 brain, oligodendroglioma .b 597 to 1070 474 to 1       474/477
(99 %)
2 diff
(99.6 %id)
AI494182 Kidney .b 1048 to 1440 1 to 393   tiling clone,   393/394
(99 %)
1 diff
(99.8 %id)
AI637641 pooled germ cell tumors .b 823 to 1143 322 to 1       322/322
(100 %)
2 diff
(99.4 %id)
AI654698 pooled germ cell tumors .b 905 to 1133 240 to 12       229/240
(95 %)
0 diff
(100 %id)
AI872000 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 526 to 879 354 to 1       354/354
(100 %)
0 diff
(100 %id)
AW007247 adenocarcinoma, Pancreas .b 305 to 879 574 to 1       574/574
(100 %)
4 diff
(99.4 %id)
AW003595 brain, four pooled pituitary adenomas .b 292 to 879 586 to 1       586/586
(100 %)
9 diff
(98.5 %id)
AW003612 brain, four pooled pituitary adenomas .b 295 to 879 583 to 1       583/583
(100 %)
2 diff
(99.7 %id)
AW148613 brain, tumor, 5 pooled (see description) .b 861 to 1143 315 to 32   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 284/284
(100 %)
16 diff
(94.4 %id)
AW194077 adenocarcinoma, Pancreas .b 412 to 879 466 to 1       466/466
(100 %)
4 diff
(99.2 %id)
AW207663   .b 919 to 1143 243 to 18   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 226/226
(100 %)
1 diff
(99.6 %id)
BE275874 melanotic melanoma, skin .a 411 to 1067 1 to 659       659/698
(94 %)
14 diff
(98.0 %id)
BF939459 brain, glioblastoma (pooled) .b 298 to 871 574 to 1       574/574
(100 %)
0 diff
(100 %id)
BE542163 cervix .a 1759 to 2433 1 to 684       684/871
(78 %)
18 diff
(98.0 %id)
BE387787 endometrium, adenocarcinoma cell line, uterus .a 413 to 1061 8 to 666       659/717
(91 %)
24 diff
(96.7 %id)
BE391171 endometrium, adenocarcinoma cell line, uterus .b 525 to 1137 1 to 611       611/614
(99 %)
8 diff
(98.7 %id)
BE409661 choriocarcinoma, placenta .a 393 to 1067 1 to 672       672/673
(99 %)
15 diff
(97.8 %id)
BE410986 choriocarcinoma, placenta .a 424 to 856 69 to 501       433/504
(85 %)
11 diff
(97.9 %id)
BE409380 choriocarcinoma, placenta .a 410 to 1110 1 to 695       695/709
(98 %)
23 diff
(96.8 %id)
BE747133 adenocarcinoma cell line, ovary .a 1575 to 2054 1 to 480       480/480
(100 %)
1 diff
(99.8 %id)
BE731353 choriocarcinoma, placenta .a 427 to 1155 1 to 733       733/916
(80 %)
21 diff
(97.8 %id)
BE735221 choriocarcinoma, placenta .a 398 to 1244 1 to 857       857/860
(99 %)
30 diff
(96.6 %id)
BE889932 leiomyosarcoma, uterus .a 455 to 1218 1 to 759       759/860
(88 %)
24 diff
(97.3 %id)
BE792176 lung, small cell carcinoma .a 1372 to 2053 41 to 721       681/721
(94 %)
6 diff
(99.2 %id)
BE799817 lung, small cell carcinoma .a 384 to 1246 8 to 907       652/1037
(62 %)
38 diff
(96.4 %id)
BE898681 adenocarcinoma cell line, ovary .a 1088 to 1800 1 to 704       704/874
(80 %)
11 diff
(98.8 %id)
BE899289 adenocarcinoma cell line, ovary .a 1089 to 1791 1 to 701       701/701
(100 %)
5 diff
(99.3 %id)
BF026359 melanotic melanoma, skin .a 858 to 1563 1 to 705       705/705
(100 %)
3 diff
(99.6 %id)
BF027277 melanotic melanoma, skin .a 846 to 1688 10 to 877       868/966
(89 %)
6 diff
(99.4 %id)
BF239331 bone marrow, from chronic myelogenous leukemia .b 304 to 890 1 to 586       586/746
(78 %)
45 diff
(94.0 %id)
BF340187 brain, glioblastoma with EGFR amplification .a 404 to 1175 12 to 771       760/944
(80 %)
28 diff
(97.1 %id)
BF666792 brain, primitive neuroectoderm .a 1954 to 2673 1 to 708       708/886
(79 %)
37 diff
(95.9 %id)
BF667157 brain, primitive neuroectoderm .a 1954 to 2674 1 to 706       706/858
(82 %)
22 diff
(97.5 %id)
BF700908 brain, primitive neuroectoderm .a 1954 to 2654 1 to 692       692/773
(89 %)
30 diff
(96.2 %id)
BF979381 testis .a 396 to 993 7 to 602       596/602
(99 %)
9 diff
(98.6 %id)
BG169856 hypernephroma, cell line, Kidney .b 940 to 1141 1 to 226   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 226/226
(100 %)
23 diff
(89.9 %id)
BG256940 embryonal carcinoma, cell line, testis .a 432 to 1261 1 to 827       827/982
(84 %)
41 diff
(95.9 %id)
BG429450 Kidney .a 1411 to 2051 1 to 647       647/647
(100 %)
14 diff
(97.9 %id)
BG485018 lung .a 1305 to 2098 1 to 797       797/797
(100 %)
44 diff
(94.5 %id)
BG830129 epithelioid carcinoma cell line, Pancreas .a 1636 to 2074 1 to 439       439/439
(100 %)
0 diff
(100 %id)
BI258682 cervical carcinoma cell line, cervix .a 1105 to 1856 1 to 752       752/1289
(58 %)
10 diff
(99.3 %id)
BI765567 pooled colon, kidney, stomach .a 406 to 1015 26 to 662       618/662
(93 %)
30 diff
(95.5 %id)
BI759433 pooled colon, kidney, stomach .a 1234 to 1919 1 to 686       686/686
(100 %)
0 diff
(100 %id)
BI868420 adenocarcinoma, cell line, Liver .a 1891 to 2576 1 to 689       689/689
(100 %)
3 diff
(99.6 %id)
BM043019 carcinoma, cell line, Prostate .a 1243 to 1966 1 to 726       726/856
(84 %)
20 diff
(97.7 %id)
BM043895 carcinoma, cell line, Prostate .a 1873 to 2074 1 to 202       202/202
(100 %)
1 diff
(99.6 %id)
BM012384 brain, neuroblastoma, cell line .b 864 to 1143 1 to 284   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 284/284
(100 %)
5 diff
(98.3 %id)
BM551811 astrocytoma grade IV, cell line, brain .a 469 to 1483 1 to 1034       1034/1103
(93 %)
35 diff
(96.9 %id)
BM457066 embryonal carcinoma, cell line, testis .a 411 to 1242 1 to 841       841/905
(92 %)
22 diff
(97.6 %id)
CA337107 posterior rhombomeres 5-8 (4 pooled) .b 966 to 1143 1 to 178   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 178/178
(100 %)
0 diff
(100 %id)
BQ278546 mixed (pool of 40 RNAs) .b 530 to 1143 1 to 621       621/974
(63 %)
19 diff
(98.1 %id)
BQ218031 epithelioid carcinoma, Pancreas .a 1008 to 1837 1 to 844       844/893
(94 %)
22 diff
(97.6 %id)
BQ223733 embryonal carcinoma, cell line, testis .a 402 to 1177 1 to 786       786/870
(90 %)
14 diff
(98.4 %id)
BU167554 melanotic melanoma, skin .a 1121 to 1929 1 to 812       812/812
(100 %)
4 diff
(99.6 %id)
BQ899331 sciatic nerve .a 1092 to 1946 1 to 870       870/897
(96 %)
30 diff
(96.7 %id)
BQ706157 Spleen .a 470 to 1366 13 to 921       909/940
(96 %)
44 diff
(95.4 %id)
BQ709551 Spleen .a 379 to 1009 17 to 654       638/858
(74 %)
23 diff
(97.4 %id)
BQ890386 eye, normal pigmented retinal epithelium .a 412 to 1298 1 to 899       899/904
(99 %)
23 diff
(97.5 %id)
BQ887542 carcinoma, cell line, Prostate .a 393 to 1278 1 to 896       896/914
(98 %)
24 diff
(97.4 %id)
BU588347 mixed (pool of 40 RNAs) .b 739 to 1150 1 to 413       413/1053
(39 %)
12 diff
(98.9 %id)
BU538700 adenocarcinoma, cell line, breast .a 1990 to 2828 862 to 18   AAA Submitted on the opposite strand 845/845
(100 %)
8 diff
(99.1 %id)
BU540531 large cell carcinoma, lung .a 402 to 1273 1 to 884       884/916
(96 %)
19 diff
(98.0 %id)
BU552787 ovary, teratocarcinoma, cell line .a 418 to 1268 1 to 861       861/901
(95 %)
27 diff
(97.1 %id)
BU553443 ovary, teratocarcinoma, cell line .a 418 to 1209 1 to 799       799/907
(88 %)
7 diff
(99.3 %id)
BU931477 ovary, teratocarcinoma, cell line .a 418 to 1294 1 to 881       881/882
(99 %)
17 diff
(98.1 %id)
CB987945 Human Placenta, placenta .c 1 to 732 20 to 753 V2T L3R tiling clone,   734/813
(90 %)
17 diff
(98.0 %id)
CD109535 Human Placenta, placenta .c 1 to 740 20 to 764 V2T L3R F13Y F114I tiling clone,   745/768
(97 %)
13 diff
(98.4 %id)
CB960675 Human Placenta, placenta .c 1 to 655 20 to 679 V2T L3R tiling clone,   660/818
(80 %)
14 diff
(98.3 %id)
CO248052 Chondrosarcoma Lung Metastasis cell lines, lung .a 394 to 1118 1 to 720       720/812
(88 %)
19 diff
(97.7 %id)
DA606075   .a 363 to 906 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA616208   .a 383 to 852 2 to 471   capped   470/470
(100 %)
1 diff
(99.8 %id)
TI_57147665   .a 406 to 1015 26 to 662       618/662
(93 %)
30 diff
(95.5 %id)
TI_57149435   .a 1234 to 1919 70 to 755       686/755
(90 %)
6 diff
(99.3 %id)
TI_57228080   .a 1891 to 2576 55 to 743       689/689
(100 %)
3 diff
(99.6 %id)
BP268311 thyroid .a 906 to 1487 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP271577   .a 758 to 1387 1 to 630       630/630
(100 %)
5 diff
(99.3 %id)
BP274748 Kidney .a 906 to 1487 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP275283 Kidney .a 400 to 978 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
BP276479 Kidney .a 398 to 962 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DA621970 Kidney .a 419 to 957 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA625278 Kidney .a 399 to 945 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA625882 Kidney .a 400 to 957 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA631432 Kidney .a 334 to 909 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA632408 Kidney .a 398 to 956 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA633851 Kidney .a 410 to 986 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
CB144750 Liver .a 1399 to 1658 1 to 260       260/260
(100 %)
3 diff
(98.9 %id)
CB164643 Liver .b 294 to 844 1 to 551       551/551
(100 %)
1 diff
(99.9 %id)
DA638018 Liver .a 908 to 1248 2 to 342   capped   341/341
(100 %)
0 diff
(100 %id)
M58581 Liver .a 415 to 2669 1 to 2254 exact     2254/2255
(99 %)
2 diff
(100.0 %id)
AU121876 mammary gland .a 400 to 1259 2 to 862   capped   861/862
(99 %)
11 diff
(98.8 %id)
AU147607 mammary gland .a 2521 to 3092 577 to 1       577/578
(99 %)
15 diff
(97.5 %id)
DA648580   .a 400 to 938 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA654561   .a 400 to 968 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA655133   .a 400 to 962 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA655203   .a 380 to 961 2 to 584   capped   583/583
(100 %)
3 diff
(99.5 %id)
D19885   .b 1082 to 1193 112 to 1       112/112
(100 %)
0 diff
(100 %id)
BP297732   .a 1188 to 1758 1 to 571       571/571
(100 %)
3 diff
(99.5 %id)
BP302300   .a 1255 to 1816 1 to 562       562/562
(100 %)
4 diff
(99.3 %id)
DA666154   .a 424 to 971 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA678509   .a 397 to 948 2 to 553   capped   552/553
(99 %)
1 diff
(99.9 %id)
BG938476 Bone, Hip .d 1 to 584 1 to 584 exact tiling clone,   584/584
(100 %)
4 diff
(99.4 %id)
NM_000098.2   .a 1 to 3092 1 to 3092 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 3092/3092
(100 %)
0 diff
(100 %id)
DA692494   .a 400 to 948 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA693483   .a 381 to 953 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA702903   .a 400 to 961 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA703478   .a 400 to 881 2 to 484   capped   483/483
(100 %)
1 diff
(99.8 %id)
DA704847   .a 424 to 957 2 to 535   capped   534/534
(100 %)
4 diff
(99.3 %id)
DA708240   .a 400 to 894 2 to 496   capped   495/495
(100 %)
1 diff
(99.8 %id)
DA711416   .a 398 to 968 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA712110   .a 461 to 993 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA717067   .a 382 to 933 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA718281   .a 401 to 915 2 to 517   capped   516/516
(100 %)
2 diff
(99.7 %id)
DA719384   .a 424 to 990 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
DA729150   .a 367 to 1025 2 to 665   capped   664/705
(94 %)
8 diff
(98.9 %id)
DB354185   .a 2288 to 2827 547 to 3       545/558
(97 %)
0 diff
(100 %id)
AU127652   .a 380 to 1217 2 to 848   capped   847/847
(100 %)
28 diff
(96.7 %id)
DB364593   .a 2362 to 2820 463 to 1       463/465
(99 %)
27 diff
(94.2 %id)
AU127755   .a 383 to 1169 2 to 796   capped   795/836
(95 %)
22 diff
(97.4 %id)
AU128124   .a 383 to 856 2 to 476   capped   475/514
(92 %)
9 diff
(98.3 %id)
AU150437   .a 2595 to 3092 494 to 1       494/540
(91 %)
5 diff
(99.1 %id)
AU132249   .a 370 to 1153 2 to 790   capped   789/794
(99 %)
16 diff
(98.0 %id)
AU153811   .a 2272 to 2828 554 to 1       554/555
(99 %)
15 diff
(97.3 %id)
AU132375   .a 389 to 1187 2 to 805   capped   804/806
(99 %)
7 diff
(99.2 %id)
DA743795   .a 371 to 888 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
BP315434 mammary gland .a 839 to 1420 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP318086 pericardium .a 2045 to 2617 1 to 574       574/583
(98 %)
4 diff
(99.4 %id)
DA815366   .a 362 to 891 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
DA818812   .a 401 to 954 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA820266 pericardium .a 401 to 711 2 to 312   capped   311/311
(100 %)
0 diff
(100 %id)
DA820853 pericardium .a 489 to 899 2 to 412   capped   411/411
(100 %)
3 diff
(99.3 %id)
AU136735 placenta .a 945 to 1724 2 to 785   capped   784/789
(99 %)
11 diff
(98.7 %id)
DB375545 placenta .a 2373 to 2817 447 to 4       444/447
(99 %)
0 diff
(100 %id)
AU137702 placenta .a 400 to 1168 2 to 768   capped   767/769
(99 %)
8 diff
(99.0 %id)
DB377080 placenta .a 2215 to 2817 608 to 12       597/609
(98 %)
0 diff
(100 %id)
AU139760 placenta .a 424 to 1203 2 to 788   capped   787/891
(88 %)
14 diff
(98.5 %id)
AU158163 placenta .a 2540 to 3092 554 to 1       554/554
(100 %)
16 diff
(97.2 %id)
AU139935 placenta .a 470 to 1056 2 to 589   capped   588/588
(100 %)
4 diff
(99.4 %id)
DB380532 placenta .a 2522 to 3092 575 to 1   tiling clone,   575/577
(99 %)
36 diff
(93.8 %id)
DA835853 placenta .a 397 to 862 2 to 468   capped   467/467
(100 %)
2 diff
(99.6 %id)
DA836098 placenta .a 422 to 973 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA866143 Prostate .a 383 to 923 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA867960 Prostate .a 383 to 886 2 to 506   capped   505/505
(100 %)
2 diff
(99.7 %id)
DA870063 Prostate .a 380 to 912 2 to 534   capped   533/533
(100 %)
2 diff
(99.7 %id)
DA872425 Prostate .a 399 to 753 2 to 356   capped   355/355
(100 %)
0 diff
(100 %id)
BP326320 prostata .a 1201 to 1782 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DA884476   .a 400 to 960 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BM742689 Ascites, stomach .a 406 to 1038 1 to 634       634/634
(100 %)
5 diff
(99.3 %id)
BM765154 Ascites, stomach .a 406 to 980 1 to 575       575/575
(100 %)
0 diff
(100 %id)
BM829569 Ascites, stomach .a 908 to 1547 1 to 640       640/640
(100 %)
0 diff
(100 %id)
BM850833 stomach .a 1440 to 1650 1 to 211       211/211
(100 %)
7 diff
(96.7 %id)
BM818530 stomach .a 899 to 1231 1 to 333       333/333
(100 %)
1 diff
(99.7 %id)
DA911696   .a 424 to 985 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA920876 small intestine .a 371 to 743 2 to 374   capped   373/373
(100 %)
0 diff
(100 %id)
DA921641 small intestine .a 459 to 1034 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA921770 small intestine .a 424 to 911 2 to 489   capped   488/488
(100 %)
1 diff
(99.8 %id)
DA922986 small intestine .a 400 to 978 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA931851 Spleen .a 397 to 897 2 to 502   capped   501/501
(100 %)
0 diff
(100 %id)
DA934931 Spleen .a 402 to 985 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA960312 Spleen .a 400 to 980 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA961098 Spleen .a 383 to 933 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA964388 stomach .a 399 to 961 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA995042 synovial membrane tissue from rheumatioidarthritis .a 400 to 944 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
BP346623 brain .a 762 to 1341 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DB000372 breast, tumor tissue .a 400 to 897 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DB002298 breast, tumor tissue .a 419 to 954 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DN992040 brain, whole brain .a 417 to 1004 9 to 596       588/596
(98 %)
6 diff
(99.0 %id)
DB027854 testis .a 399 to 712 2 to 315   capped   314/314
(100 %)
1 diff
(99.7 %id)
DB031369 testis .a 398 to 1004 2 to 608   capped   607/607
(100 %)
1 diff
(99.9 %id)
DB044902 testis .a 373 to 928 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB046559 testis .a 382 to 933 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB046877 testis .a 397 to 953 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB069435 testis .a 373 to 903 2 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
DB119614 thymus .a 399 to 936 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
TI_154066772   .a 1489 to 2010 579 to 58       522/579
(90 %)
0 diff
(100 %id)
TI_154135028   .b 305 to 1143 911 to 77   tiling clone, AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 835/926
(90 %)
14 diff
(98.5 %id)
TI_154195041   .a 379 to 1268 51 to 933       883/1035
(85 %)
24 diff
(97.7 %id)
TI_154196061   .a 416 to 1133 15 to 734       720/1036
(69 %)
50 diff
(95.2 %id)
TI_154196075   .a 416 to 1312 29 to 914       886/1044
(84 %)
28 diff
(97.4 %id)
TI_154197693   .a 410 to 1400 52 to 1028       977/990
(98 %)
40 diff
(96.0 %id)
TI_154197707   .a 410 to 1198 66 to 854       789/997
(79 %)
54 diff
(94.6 %id)
DB182199 liver, tumor tissue .a 401 to 971 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB192156 ovary, tumor tissue .a 844 to 1375 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DB204312 trachea .a 382 to 944 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
U09648   .a 1 to 3092 1 to 3090 exact tiling clone,   3090/3090
(100 %)
7 diff
(99.8 %id)
CA423665 cell lines, Chondrosarcoma .b 281 to 879 617 to 19   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 599/599
(100 %)
2 diff
(99.7 %id)
BU629852 cell lines, Chondrosarcoma .b 486 to 1143 676 to 19   AAA Possibly primed on the genome, locally A rich (15/16 A in genome downstream of last aligned base) 658/658
(100 %)
1 diff
(99.9 %id)
DB254485 uterus .a 382 to 894 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
DB291852 uterus .a 1162 to 1735 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
AU077344   .a 400 to 565 1 to 165       165/165
(100 %)
3 diff
(98.2 %id)
DA818812   .a 401 to 954 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA820266 pericardium .a 401 to 711 2 to 312   capped   311/311
(100 %)
0 diff
(100 %id)
DA820853 PERIC2000673 CPT2.aAug10 899 412 PERIC2000673     411 3
AU136735 PLACE1004967 CPT2.aAug10 1724 785 PLACE1004967     784 11
DB375545 PLACE1004967 CPT2.aAug10 2817 4 PLACE1004967     444 0
AU137702 PLACE1007037 CPT2.aAug10 1168 768 PLACE1007037     767 8
DB377080 PLACE1007037 CPT2.aAug10 2817 12 PLACE1007037     597 0
AU139760 PLACE1011278 CPT2.aAug10 1203 788 PLACE1011278     787 14
AU158163 PLACE1011278 CPT2.aAug10 3092 1 PLACE1011278     554 16
AU139935 PLACE1011629 CPT2.aAug10 1056 589 PLACE1011629     588 4
DB380532 PLACE1011629 CPT2.aAug10 3092 1 PLACE1011629     575 36
DA835853 PLACE6001265 CPT2.aAug10 862 468 PLACE6001265     467 2
DA836098 PLACE6001616 CPT2.aAug10 973 553 PLACE6001616     552 0
DA866143 PROST2000731 CPT2.aAug10 923 542 PROST2000731     541 0
DA867960 PROST2003107 CPT2.aAug10 886 506 PROST2003107     505 2
DA870063 PROST2006068 CPT2.aAug10 912 534 PROST2006068     533 2
DA872425 PROST2009338 CPT2.aAug10 753 356 PROST2009338     355 0
BP326320 PRS02308 CPT2.aAug10 1782 583 PRS02308     583 4
DA884476 PUAEN2004350 CPT2.aAug10 960 562 PUAEN2004350     561 0
BM742689 S3SNU16-9-H10 CPT2.aAug10 1038 634 S3SNU16-9-H10     634 5
BM742689 S3SNU16-9-H10 CPT2.aAug10 1038 634 S3SNU16-9-H10     634 5
BM765154 S3SNU16s1-10-H11 CPT2.aAug10 980 575 S3SNU16s1-10-H11     575 0
BM765154 S3SNU16s1-10-H11 CPT2.aAug10 980 575 S3SNU16s1-10-H11     575 0
BM829569 S9SNU601-59-H07 CPT2.aAug10 1547 640 S9SNU601-59-H07     640 0
BM829569 S9SNU601-59-H07 CPT2.aAug10 1547 640 S9SNU601-59-H07     640 0
BM850833 S21SNU520-50-D01 CPT2.aAug10 1650 211 S21SNU520-50-D01     211 7
BM818530 S21SNU520s1-4-B03 CPT2.aAug10 1231 333 S21SNU520s1-4-B03     333 1
DA911696 SKNSH2005175 CPT2.aAug10 985 563 SKNSH2005175     562 0
DA920876 SMINT2006407 CPT2.aAug10 743 374 SMINT2006407     373 0
DA921641 SMINT2007380 CPT2.aAug10 1034 577 SMINT2007380     576 0
DA921770 SMINT2007538 CPT2.aAug10 911 489 SMINT2007538     488 1
DA922986 SMINT2009120 CPT2.aAug10 978 580 SMINT2009120     579 0
DA931851 SPLEN2001012 CPT2.aAug10 897 502 SPLEN2001012     501 0
DA934931 SPLEN2005987 CPT2.aAug10 985 586 SPLEN2005987     585 1
DA960312 SPLEN2040700 CPT2.aAug10 980 582 SPLEN2040700     581 0
DA961098 SPLEN2041756 CPT2.aAug10 933 552 SPLEN2041756     551 0
DA964388 STOMA2002467 CPT2.aAug10 961 564 STOMA2002467     563 1
DA995042 SYNOV4008041 CPT2.aAug10 944 546 SYNOV4008041     545 0
BP346623 SZB00859 CPT2.aAug10 1341 582 SZB00859     582 3
DB000372 TBAES2002020 CPT2.aAug10 897 499 TBAES2002020     498 0
DB002298 TBAES2004443 CPT2.aAug10 954 537 TBAES2004443     536 0
DN992040 TC119663 CPT2.aAug10 1004 596 TC119663     588 6
DN992040 TC119663 CPT2.aAug10 1004 596 TC119663     588 6
DB027854 TESTI2010519 CPT2.aAug10 712 315 TESTI2010519     314 1
DB031369 TESTI2015339 CPT2.aAug10 1004 608 TESTI2015339     607 1
DB044902 TESTI2032986 CPT2.aAug10 928 557 TESTI2032986     556 1
DB046559 TESTI2035143 CPT2.aAug10 933 553 TESTI2035143     552 0
DB046877 TESTI2035536 CPT2.aAug10 953 558 TESTI2035536     557 0
DB069435 TESTI4011673 CPT2.aAug10 903 532 TESTI4011673     531 1
DB119614 THYMU2027339 CPT2.aAug10 936 539 THYMU2027339     538 0
TI_154066772 TI_154066772 CPT2.aAug10 2010 58 TI_154066772     522 0
TI_154135028 TI_154135028 CPT2.bAug10 1143 77 TI_154135028   Anomalous_clone 835 14
TI_154195041 TI_154195041 CPT2.aAug10 1268 933 TI_154195041     883 24
TI_154196061 TI_154196061 CPT2.aAug10 1133 734 TI_154196061     720 50
TI_154196075 TI_154196075 CPT2.aAug10 1312 914 TI_154196075     886 28
TI_154197693 TI_154197693 CPT2.aAug10 1400 1028 TI_154197693     977 40
TI_154197707 TI_154197707 CPT2.aAug10 1198 854 TI_154197707     789 54
DB182199 TLIVE2001146 CPT2.aAug10 971 572 TLIVE2001146     571 0
DB192156 TOVAR2000195 CPT2.aAug10 1375 533 TOVAR2000195     532 0
DB204312 TRACH2015607 CPT2.aAug10 944 564 TRACH2015607     563 0
U09648 U09648 CPT2.aAug10 3092 3090 U09648     3090 7
CA423665 UI-H-FL0-bdl-k-13-0-UI CPT2.bAug10 879 19 UI-H-FL0-bdl-k-13-0-UI   Anomalous_clone 599 2
CA423665 UI-H-FL0-bdl-k-13-0-UI CPT2.bAug10 879 19 UI-H-FL0-bdl-k-13-0-UI   Anomalous_clone 599 2
BU629852 UI-H-FL0-bdm-m-22-0-UI CPT2.bAug10 1143 19 UI-H-FL0-bdm-m-22-0-UI   Anomalous_clone 658 1
BU629852 UI-H-FL0-bdm-m-22-0-UI CPT2.bAug10 1143 19 UI-H-FL0-bdm-m-22-0-UI   Anomalous_clone 658 1
DB254485 UTERU2009458 CPT2.aAug10 894 515 UTERU2009458     514 1
DB291852 UTERU3022369 CPT2.aAug10 1735 575 UTERU3022369     574 1
AU077344 Zrv6c925 CPT2.aAug10 565 165 Zrv6c925     165 3
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC