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Gene COL17A1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
299 supporting clones for gene COL17A1 back to top
cDNA accession
Links to the sequence		 Tissue

most 5' clones
in red		 Match
mRNA		 From bp
to bp
in mRNA		 From bp
to bp
in accs.		 Clone encodes
complete protein
(with AA variation)		 Features Anomalies
detected by
AceView		 Accession
match over
(% length)		 Base differences
relative to genome
(% identity)
AA366091 Pancreas .a 4080 to 4358 1 to 282       282/282
(100 %)		 3 diff
(99.0 %id)
AA366395 Pancreas .a 3718 to 4060 1 to 346       346/346
(100 %)		 10 diff
(97.2 %id)
AA366989 Pancreas .a 4297 to 4590 1 to 296       296/296
(100 %)		 3 diff
(99.0 %id)
AF136185   .a 4683 to 5687 1 to 1005   tiling clone,   1005/1005
(100 %)		 0 diff
(100 %id)
AF136186   .f 698 to 1092 1 to 395       395/395
(100 %)		 0 diff
(100 %id)
AK300117 placenta .a 159 to 2114 1 to 1956       1956/2100
(93 %)		 7 diff
(99.7 %id)
AK300226 placenta .b 1 to 1923 1 to 1923 E10G E50A T228M G446S G639C ... tiling clone,   1923/2249
(85 %)		 9 diff
(99.6 %id)
AK309940 placenta .d 1 to 1513 1 to 1513 E141G T210M tiling clone,   1513/1513
(100 %)		 4 diff
(99.8 %id)
AW365596 head_neck .j-u 11 to 437 1 to 427 F26I C67L tiling clone,   427/427
(100 %)		 6 diff
(98.6 %id)
AW365782 head_neck .j-u 129 to 437 1 to 312 P2A C19F F26I A36G G48W ...     312/312
(100 %)		 11 diff
(96.5 %id)
AW365809 head_neck .j-u 1 to 437 1 to 437 F26I C67W tiling clone,   437/437
(100 %)		 6 diff
(98.7 %id)
AW365859 head_neck .j-u 12 to 437 1 to 426 F26I tiling clone,   426/426
(100 %)		 2 diff
(99.6 %id)
AW377762 head_neck .a 4241 to 4484 244 to 1       244/244
(100 %)		 2 diff
(99.2 %id)
AW384280 head_neck .a 5220 to 5566 1 to 348       348/348
(100 %)		 3 diff
(99.2 %id)
AW384468 head_neck .a 5013 to 5113 1 to 100       100/100
(100 %)		 1 diff
(99.0 %id)
AW384483 head_neck .a 5013 to 5113 100 to 1       100/100
(100 %)		 1 diff
(99.0 %id)
AW384487 head_neck .a 5013 to 5113 100 to 1       100/100
(100 %)		 1 diff
(99.0 %id)
BE183374 head_neck .d 1478 to 1822 345 to 2     Submitted on the opposite strand 344/357
(96 %)		 0 diff
(100 %id)
BE703136 nervous_normal .a 5197 to 5559 363 to 1       363/371
(97 %)		 4 diff
(99.0 %id)
BE711155 head_neck .g 1 to 420 420 to 1 D2A D16A S17A M18W D19X tiling clone,   420/422
(99 %)		 4 diff
(99.1 %id)
BE713257 head_neck .a 4801 to 5096 312 to 12       301/312
(96 %)		 0 diff
(100 %id)
BE713281 head_neck .a 4780 to 5108 329 to 1       329/329
(100 %)		 8 diff
(97.6 %id)
BE713283 head_neck .a 4771 to 5112 351 to 1       351/355
(98 %)		 33 diff
(90.8 %id)
BE713419 head_neck .a 4767 to 5100 1 to 332       332/332
(100 %)		 8 diff
(97.6 %id)
BE713420 head_neck .a 4780 to 5109 334 to 5       330/334
(98 %)		 0 diff
(100 %id)
BE713423 head_neck .a 4783 to 5112 330 to 1       330/331
(99 %)		 8 diff
(97.6 %id)
BE713426 head_neck .a 4771 to 5112 345 to 4       342/356
(96 %)		 0 diff
(100 %id)
BE713427 head_neck .a 4768 to 5100 1 to 334       334/334
(100 %)		 7 diff
(98.0 %id)
BE713428 head_neck .a 4790 to 5100 1 to 311       311/311
(100 %)		 2 diff
(99.4 %id)
BE713439 head_neck .a 4771 to 5100 7 to 337       331/337
(98 %)		 6 diff
(98.3 %id)
BE713441 head_neck .a 4771 to 5106 1 to 336       336/336
(100 %)		 6 diff
(98.3 %id)
BE713448 head_neck .a 4767 to 5100 1 to 335       335/335
(100 %)		 9 diff
(97.4 %id)
BE713456 head_neck .a 4772 to 5100 1 to 330       330/330
(100 %)		 6 diff
(98.2 %id)
BE713468 head_neck .a 4766 to 5106 1 to 341       341/342
(99 %)		 9 diff
(97.4 %id)
BE713481 head_neck .a 4772 to 5106 1 to 335       335/336
(99 %)		 5 diff
(98.6 %id)
BE713484 head_neck .a 4780 to 5106 330 to 2       329/330
(99 %)		 0 diff
(100 %id)
BE713487 head_neck .a 4767 to 5100 1 to 334       334/334
(100 %)		 9 diff
(97.4 %id)
BE713490 head_neck .a 4780 to 5109 336 to 4       333/336
(99 %)		 0 diff
(100 %id)
BE713527 head_neck .a 4780 to 5109 335 to 6       330/335
(98 %)		 0 diff
(100 %id)
BE713528 head_neck .a 4767 to 5100 1 to 333       333/333
(100 %)		 6 diff
(98.2 %id)
BE713530 head_neck .a 4780 to 5110 336 to 4       333/336
(99 %)		 0 diff
(100 %id)
BE713533 head_neck .a 4780 to 5109 336 to 7       330/336
(98 %)		 0 diff
(100 %id)
BE713535 head_neck .a 4780 to 5114 353 to 19       335/353
(94 %)		 0 diff
(100 %id)
BE713536 head_neck .a 4780 to 5106 334 to 7       328/334
(98 %)		 0 diff
(100 %id)
BE713540 head_neck .a 4780 to 5103 322 to 1       322/322
(100 %)		 17 diff
(94.8 %id)
BE713542 head_neck .a 4780 to 5109 334 to 5       330/334
(98 %)		 0 diff
(100 %id)
BE713553 head_neck .a 4771 to 5100 6 to 336       331/336
(98 %)		 6 diff
(98.3 %id)
BE713580 head_neck .a 4780 to 5114 335 to 2       334/335
(99 %)		 0 diff
(100 %id)
BE713583 head_neck .a 4771 to 5100 19 to 348       330/348
(94 %)		 6 diff
(98.3 %id)
BE713585 head_neck .a 4771 to 5100 18 to 347       330/347
(95 %)		 6 diff
(98.3 %id)
BE713588 head_neck .a 4766 to 5100 1 to 335       335/335
(100 %)		 7 diff
(98.0 %id)
BE713596 head_neck .a 4766 to 5101 1 to 335       335/335
(100 %)		 8 diff
(97.7 %id)
BE713597 head_neck .a 4780 to 5109 332 to 4       329/332
(99 %)		 0 diff
(100 %id)
BE713598 head_neck .a 4771 to 5113 344 to 2       343/348
(98 %)		 0 diff
(100 %id)
BE713648 head_neck .a 4766 to 5100 1 to 335       335/335
(100 %)		 10 diff
(97.1 %id)
BE713653 head_neck .a 4823 to 4981 32 to 195       164/199
(82 %)		 16 diff
(92.0 %id)
BE713675 head_neck .a 4766 to 5100 1 to 336       336/336
(100 %)		 7 diff
(98.0 %id)
BE713692 head_neck .a 4780 to 5100 1 to 321       321/321
(100 %)		 2 diff
(99.4 %id)
BE713694 head_neck .a 4774 to 5100 1 to 327       327/327
(100 %)		 2 diff
(99.4 %id)
BE713695 head_neck .a 4771 to 5100 4 to 332       329/332
(99 %)		 6 diff
(98.2 %id)
BE713700 head_neck .a 4774 to 5100 1 to 327       327/327
(100 %)		 3 diff
(99.1 %id)
BE713703 head_neck .a 4780 to 5113 334 to 1       334/334
(100 %)		 8 diff
(97.7 %id)
BE713714 head_neck .a 4780 to 5113 334 to 1       334/334
(100 %)		 10 diff
(97.1 %id)
BE713716 head_neck .a 4771 to 5100 331 to 1       331/332
(99 %)		 6 diff
(98.2 %id)
BE713717 head_neck .a 4780 to 5113 336 to 2       335/336
(99 %)		 0 diff
(100 %id)
BE713739 head_neck .a 4766 to 5100 1 to 335       335/335
(100 %)		 7 diff
(98.0 %id)
BE713740 head_neck .a 4771 to 5100 1 to 330       330/330
(100 %)		 4 diff
(98.8 %id)
BE713742 head_neck .a 4780 to 5100 321 to 1       321/321
(100 %)		 2 diff
(99.4 %id)
BE713743 head_neck .a 4771 to 5100 18 to 347       330/347
(95 %)		 6 diff
(98.3 %id)
BE713745 head_neck .a 4780 to 5114 336 to 2       335/336
(99 %)		 0 diff
(100 %id)
BE713746 head_neck .a 4766 to 5100 1 to 334       334/334
(100 %)		 10 diff
(97.1 %id)
BE713748 head_neck .a 4780 to 5113 335 to 2       334/335
(99 %)		 0 diff
(100 %id)
BE713749 head_neck .a 4780 to 5109 350 to 21       330/350
(94 %)		 0 diff
(100 %id)
BE713751 head_neck .a 4780 to 5114 335 to 1       335/335
(100 %)		 9 diff
(97.4 %id)
BE713756 head_neck .a 4765 to 5100 1 to 337       337/337
(100 %)		 13 diff
(96.2 %id)
BE713790 head_neck .a 4780 to 5100 1 to 320       320/320
(100 %)		 4 diff
(98.8 %id)
BE713791 head_neck .a 4767 to 5104 1 to 338       338/338
(100 %)		 6 diff
(98.3 %id)
BE713796 head_neck .a 4780 to 5109 336 to 7       330/336
(98 %)		 0 diff
(100 %id)
BE713801 head_neck .a 4767 to 5100 1 to 333       333/333
(100 %)		 6 diff
(98.2 %id)
BE713815 head_neck .a 4767 to 5100 1 to 336       336/336
(100 %)		 9 diff
(97.4 %id)
BE713827 head_neck .a 4771 to 5100 9 to 337       329/337
(97 %)		 6 diff
(98.3 %id)
BE713828 head_neck .a 4783 to 5109 330 to 4       327/332
(98 %)		 0 diff
(100 %id)
BE713834 head_neck .a 4780 to 5114 335 to 1       335/335
(100 %)		 6 diff
(98.3 %id)
BE713835 head_neck .a 4771 to 5100 1 to 330       330/330
(100 %)		 2 diff
(99.4 %id)
BE713837 head_neck .a 4780 to 5109 335 to 6       330/335
(98 %)		 0 diff
(100 %id)
BE713838 head_neck .a 4771 to 5100 330 to 1       330/334
(98 %)		 0 diff
(100 %id)
BE713839 head_neck .a 4780 to 5109 335 to 5       331/335
(98 %)		 0 diff
(100 %id)
BE713841 head_neck .a 4771 to 5113 346 to 4       343/349
(98 %)		 0 diff
(100 %id)
BE713842 head_neck .a 4780 to 5114 336 to 2       335/336
(99 %)		 0 diff
(100 %id)
BE713844 head_neck .a 4780 to 5114 336 to 2       335/336
(99 %)		 0 diff
(100 %id)
BE713845 head_neck .a 4780 to 5100 1 to 319       319/319
(100 %)		 3 diff
(99.1 %id)
BE713846 head_neck .a 4766 to 5100 1 to 335       335/335
(100 %)		 7 diff
(98.0 %id)
BE713850 head_neck .a 4780 to 5100 321 to 1       321/321
(100 %)		 1 diff
(99.7 %id)
BE713851 head_neck .a 4780 to 5109 335 to 6       330/335
(98 %)		 0 diff
(100 %id)
BE713852 head_neck .a 4767 to 5100 1 to 334       334/334
(100 %)		 4 diff
(98.9 %id)
BE713853 head_neck .a 4780 to 5109 335 to 5       331/335
(98 %)		 0 diff
(100 %id)
BE713854 head_neck .a 4780 to 5100 321 to 1       321/321
(100 %)		 4 diff
(98.8 %id)
BE713855 head_neck .a 4780 to 5106 330 to 3       328/330
(99 %)		 0 diff
(100 %id)
BE713874 head_neck .a 4769 to 5101 1 to 333       333/333
(100 %)		 10 diff
(97.0 %id)
BE713896 head_neck .a 4780 to 5104 338 to 7       332/344
(96 %)		 0 diff
(100 %id)
BE713928 head_neck .a 4780 to 5113 1 to 334       334/337
(99 %)		 9 diff
(97.4 %id)
BE713930 head_neck .a 4771 to 5100 14 to 343       330/343
(96 %)		 6 diff
(98.3 %id)
BE713931 head_neck .a 4776 to 5109 337 to 4       334/337
(99 %)		 0 diff
(100 %id)
BE713961 head_neck .a 4766 to 5100 1 to 336       336/336
(100 %)		 9 diff
(97.4 %id)
BE713969 head_neck .a 4779 to 5109 1 to 333       333/338
(98 %)		 12 diff
(96.5 %id)
BE713970 head_neck .a 4768 to 5106 1 to 339       339/339
(100 %)		 8 diff
(97.7 %id)
BE713972 head_neck .a 4781 to 5109 332 to 4       329/333
(98 %)		 0 diff
(100 %id)
BE713984 head_neck .a 4771 to 5100 7 to 337       331/337
(98 %)		 7 diff
(98.0 %id)
BE714003 head_neck .a 4768 to 5100 1 to 333       333/333
(100 %)		 8 diff
(97.6 %id)
BE714037 head_neck .a 4766 to 5100 1 to 346       346/406
(85 %)		 35 diff
(91.4 %id)
BE714047 head_neck .a 4766 to 5106 1 to 341       341/342
(99 %)		 10 diff
(97.1 %id)
BE714048 head_neck .a 4780 to 5109 337 to 7       331/337
(98 %)		 0 diff
(100 %id)
BE714058 head_neck .a 4768 to 5100 1 to 333       333/333
(100 %)		 6 diff
(98.2 %id)
BE827330 lung_tumor .a 4861 to 5100 1 to 241       241/241
(100 %)		 3 diff
(98.8 %id)
BF088058 head_neck .f 749 to 975 240 to 13       228/240
(95 %)		 1 diff
(99.6 %id)
BF353989 head_neck .a 4771 to 5100 7 to 336       330/336
(98 %)		 6 diff
(98.3 %id)
BF353994 head_neck .a 4780 to 5106 1 to 327       327/327
(100 %)		 4 diff
(98.8 %id)
BF736937 bladder_tumor .a 4580 to 4757 1 to 183       183/183
(100 %)		 15 diff
(91.9 %id)
BF738086 bladder_tumor .f 103 to 208 8 to 113       106/113
(93 %)		 6 diff
(94.7 %id)
BF760200 colon .k-u 1 to 299 10 to 306 R28G D29P P30K K31G V32D ... tiling clone,   297/312
(95 %)		 8 diff
(97.5 %id)
BF834468 head_neck .a 4944 to 5347 406 to 4     Submitted on the opposite strand 403/406
(99 %)		 0 diff
(100 %id)
BF843346 head_neck .a 1121 to 1348 232 to 2     Submitted on the opposite strand 231/234
(98 %)		 7 diff
(97.1 %id)
BF844215 head_neck .a 1130 to 1305 188 to 14     Submitted on the opposite strand 175/188
(93 %)		 6 diff
(96.9 %id)
BF903746 marrow .a 4561 to 4922 365 to 2     Submitted on the opposite strand 364/366
(99 %)		 6 diff
(98.4 %id)
BG990761 head_neck .a 1139 to 1329 190 to 1       190/190
(100 %)		 16 diff
(91.6 %id)
BG991306 head_neck .a 1134 to 1370 1 to 238       238/238
(100 %)		 4 diff
(98.4 %id)
BG991519 head_neck .a 1139 to 1349 211 to 1       211/211
(100 %)		 8 diff
(96.3 %id)
BG991685 head_neck .a 4944 to 5347 406 to 4       403/406
(99 %)		 0 diff
(100 %id)
BG991722 head_neck .a 1140 to 1256 1 to 121       120/121
(99 %)		 6 diff
(95.1 %id)
BG991733 head_neck .a 1158 to 1297 146 to 9       138/146
(94 %)		 5 diff
(96.6 %id)
BQ300411 bladder_tumor .a 4562 to 4933 375 to 3       371/377
(98 %)		 5 diff
(98.7 %id)
BQ358755 head_neck .a 4948 to 5342 395 to 1       395/395
(100 %)		 0 diff
(100 %id)
BQ368645 placenta_normal .a 606 to 1131 1 to 526       526/530
(99 %)		 9 diff
(98.4 %id)
C00407   .a 5004 to 5312 1 to 309       309/310
(99 %)		 1 diff
(99.7 %id)
CD636083   .a 1561 to 1930 328 to 691       364/370
(98 %)		 23 diff
(93.8 %id)
CD636084   .a 1684 to 2419 750 to 20       731/754
(96 %)		 13 diff
(98.3 %id)
CN429512 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 99 to 806 1 to 708       708/708
(100 %)		 1 diff
(99.9 %id)
CN429513 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2678 to 3320 1 to 643   tiling clone,   643/644
(99 %)		 5 diff
(99.3 %id)
CN429514 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3783 to 4434 9 to 660       652/660
(98 %)		 0 diff
(100 %id)
AU076442   .a 78 to 296 1 to 219     Submitted on the opposite strand 219/219
(100 %)		 0 diff
(100 %id)
DA424867 colon .a 79 to 636 2 to 558   capped   557/558
(99 %)		 3 diff
(99.5 %id)
DA425187 colon .e 1 to 571 2 to 573 T4A K118E P119A C120M V121C ... tiling clone, capped   572/572
(100 %)		 2 diff
(99.7 %id)
CU442809 epidermis .a 4757 to 5452 706 to 11     Submitted on the opposite strand 696/706
(98 %)		 0 diff
(100 %id)
CU443609 epidermis .a 4508 to 5123 11 to 626       616/637
(96 %)		 10 diff
(98.5 %id)
CU444257 epidermis .a 1282 to 1995 736 to 23     Submitted on the opposite strand 714/736
(97 %)		 3 diff
(99.6 %id)
CU444302 epidermis .a 4508 to 5123 11 to 626       616/639
(96 %)		 10 diff
(98.5 %id)
CU444582 epidermis .a 1218 to 1995 800 to 23     Submitted on the opposite strand 778/801
(97 %)		 4 diff
(99.6 %id)
CU444803 epidermis .a 4679 to 4952 290 to 17     Submitted on the opposite strand 274/293
(93 %)		 0 diff
(100 %id)
CU446106 epidermis .a 4349 to 4953 618 to 14     Submitted on the opposite strand 605/640
(94 %)		 0 diff
(100 %id)
CU446344 epidermis .a 4945 to 5123 192 to 14     Submitted on the opposite strand 179/192
(93 %)		 0 diff
(100 %id)
CU446491 epidermis .a 3842 to 4585 753 to 10     Submitted on the opposite strand 744/753
(98 %)		 0 diff
(100 %id)
CU446748 epidermis .a 628 to 958 345 to 15     Submitted on the opposite strand 331/347
(95 %)		 5 diff
(98.6 %id)
CU448260 epidermis .a 1394 to 1995 624 to 23     Submitted on the opposite strand 602/624
(96 %)		 1 diff
(99.9 %id)
CU450686 epidermis .a 3692 to 4351 660 to 2     Submitted on the opposite strand 659/660
(99 %)		 1 diff
(99.9 %id)
CU450806 epidermis .a 628 to 965 383 to 46     Submitted on the opposite strand 338/385
(87 %)		 5 diff
(98.8 %id)
CU451364 epidermis .a 628 to 968 414 to 75     Submitted on the opposite strand 340/416
(81 %)		 12 diff
(97.2 %id)
CU451512 epidermis .a 4508 to 5123 11 to 626       616/639
(96 %)		 12 diff
(98.2 %id)
CU452024 epidermis .a 4508 to 5123 629 to 14     Submitted on the opposite strand 616/639
(96 %)		 2 diff
(99.7 %id)
CU452055 epidermis .a 4683 to 5452 780 to 11     Submitted on the opposite strand 770/781
(98 %)		 0 diff
(100 %id)
CU452170 epidermis .a 4508 to 5123 629 to 14     Submitted on the opposite strand 616/639
(96 %)		 2 diff
(99.7 %id)
CU452444 epidermis .a 4508 to 5132 11 to 635       625/638
(97 %)		 15 diff
(97.7 %id)
CU453831 epidermis .a 4550 to 4952 19 to 421       403/437
(92 %)		 8 diff
(98.2 %id)
CU454026 epidermis .a 4822 to 5583 777 to 16     Submitted on the opposite strand 762/777
(98 %)		 0 diff
(100 %id)
CU454258 epidermis .a 1258 to 1995 760 to 23     Submitted on the opposite strand 738/760
(97 %)		 4 diff
(99.5 %id)
CU455059 epidermis .a 4004 to 4795 25 to 816       792/821
(96 %)		 8 diff
(99.1 %id)
CU456571 epidermis .a 1309 to 1995 709 to 23     Submitted on the opposite strand 687/709
(96 %)		 1 diff
(99.9 %id)
CU456653 epidermis .a 4711 to 5165 472 to 18     Submitted on the opposite strand 455/495
(91 %)		 0 diff
(100 %id)
CV353092 bladder_tumor .m-u 1 to 156 25 to 179 P4Q M5V T18H S20L L21S ... tiling clone,   155/179
(86 %)		 6 diff
(96.7 %id)
CV379308 bladder_tumor .l-u 1 to 259 43 to 298 P5Q N6T N7T M8W A9R ... tiling clone,   256/298
(85 %)		 6 diff
(98.0 %id)
CV396868 head_neck .a 4305 to 4838 1 to 534       534/534
(100 %)		 1 diff
(99.9 %id)
D63465   .a 91 to 144 1 to 54       54/54
(100 %)		 0 diff
(100 %id)
AL041597 testis .f 799 to 1079 281 to 1       281/282
(99 %)		 0 diff
(100 %id)
EL950002 eyeball .a 5074 to 5628 1 to 555       555/555
(100 %)		 4 diff
(99.3 %id)
DB446292 testis .i 1 to 448 1 to 448 G12W A13S M14H P16T G18R ... tiling clone,   448/448
(100 %)		 6 diff
(98.7 %id)
DB511404 testis .a 5246 to 5685 1 to 433     Submitted on the opposite strand 433/433
(100 %)		 12 diff
(97.3 %id)
DB446845 testis .i 1 to 223 1 to 223   tiling clone,   223/223
(100 %)		 5 diff
(97.8 %id)
BY800148 eye .a 4642 to 5286 4 to 650       647/650
(99 %)		 8 diff
(98.8 %id)
W73349 heart .f 755 to 1090 338 to 1   fully sequenced,   336/336
(100 %)		 5 diff
(98.6 %id)
W73469 heart .f 721 to 1089 19 to 386   fully sequenced,   368/386
(95 %)		 7 diff
(98.2 %id)
W79203 heart .a 4913 to 5362 1 to 453       453/453
(100 %)		 4 diff
(99.2 %id)
AA036676 heart .a 4885 to 5395 1 to 518       518/520
(99 %)		 13 diff
(97.5 %id)
AA033913 liver and spleen .a 5043 to 5467 1 to 430   fully sequenced,   430/430
(100 %)		 3 diff
(99.4 %id)
AA034033 liver and spleen .a 5437 to 5689 258 to 1   fully sequenced,   258/258
(100 %)		 1 diff
(99.7 %id)
AA680357 liver and spleen .a 1012 to 1410 399 to 1   tiling clone,   399/399
(100 %)		 4 diff
(99.0 %id)
AA044571 uterus .a 5015 to 5360 1 to 350   fully sequenced,   350/350
(100 %)		 2 diff
(99.5 %id)
AA044893 uterus .a 5330 to 5695 364 to 3   fully sequenced,   362/364
(99 %)		 5 diff
(98.7 %id)
AA128560 uterus .a 5015 to 5345 1 to 330   fully sequenced,   330/330
(100 %)		 2 diff
(99.4 %id)
AA128561 uterus .a 5315 to 5688 376 to 1   tiling clone, fully sequenced,   376/376
(100 %)		 2 diff
(99.5 %id)
AA418412 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 827 to 1409 583 to 1   fully sequenced,   583/583
(100 %)		 3 diff
(99.5 %id)
AA418509 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 611 to 884 1 to 274   fully sequenced,   274/274
(100 %)		 1 diff
(99.7 %id)
AA602441   .a 4588 to 4980 9 to 398       390/398
(97 %)		 9 diff
(97.8 %id)
AA640586 invasive tumor (cell line), Prostate .a 5280 to 5373 94 to 1       94/94
(100 %)		 1 diff
(99.0 %id)
AA641352 epithelium (cell line), Prostate .a 5248 to 5539 292 to 1       292/292
(100 %)		 0 diff
(100 %id)
AA658228   .f 832 to 1063 1 to 233       233/233
(100 %)		 2 diff
(99.2 %id)
AA926883 squamous cell carcinoma from base of tongue, tongue .f 647 to 1092 445 to 1   tiling clone,   445/445
(100 %)		 4 diff
(99.2 %id)
AA926678 pooled .h-u 31 to 475 444 to 1   tiling clone,   444/446
(99 %)		 9 diff
(98.0 %id)
AA922167 pooled .h-u 1 to 475 477 to -1 R4E P20Q A37Q T51M     477/479
(99 %)		 11 diff
(97.8 %id)
AI373447 uterus .a 5296 to 5685 406 to 17   AAA   390/390
(100 %)		 0 diff
(100 %id)
AI373457 uterus .a 5224 to 5685 478 to 17   AAA   462/462
(100 %)		 1 diff
(99.8 %id)
AI572644 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 5292 to 5688 418 to 22   AAA   397/397
(100 %)		 2 diff
(99.5 %id)
AI637697 pooled germ cell tumors .f 787 to 1091 305 to 1       305/305
(100 %)		 0 diff
(100 %id)
AI671290 pooled germ cell tumors .f 586 to 1091 503 to 1       503/510
(98 %)		 7 diff
(98.7 %id)
AI688441 colon .a 5288 to 5676 400 to 12       389/400
(97 %)		 0 diff
(100 %id)
AI827484 pooled .f 644 to 1092 451 to 3   tiling clone,   449/451
(99 %)		 0 diff
(100 %id)
AI865748 normal prostate, Prostate .f 611 to 1092 490 to 5       486/501
(97 %)		 9 diff
(98.3 %id)
AI955803 adenocarcinoma, Pancreas .f 579 to 1090 513 to 1       513/516
(99 %)		 5 diff
(99.1 %id)
AW083397 colon, moderately differentiated adenocarcinoma .a 5101 to 5432 332 to 1       332/332
(100 %)		 0 diff
(100 %id)
AW573197 pooled .h-u -8 to 475 484 to 1 P20X T51M tiling clone,   484/484
(100 %)		 2 diff
(99.6 %id)
BF588625 breast, lobullar carcinoma in situ .f 556 to 814 261 to 3       259/265
(97 %)		 15 diff
(94.4 %id)
BE615666 adenocarcinoma, Pancreas .a 3892 to 4611 1 to 731       729/856
(85 %)		 28 diff
(96.8 %id)
BE615848 adenocarcinoma, Pancreas .a 3891 to 4513 1 to 622       622/622
(100 %)		 3 diff
(99.6 %id)
BE615162 adenocarcinoma, Pancreas .a 3891 to 4615 1 to 725       725/916
(79 %)		 16 diff
(98.3 %id)
BC004478 Pancreas, adenocarcinoma .a 96 to 1425 1 to 1330   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1330/1332
(99 %)		 6 diff
(99.6 %id)
BE563325 adenocarcinoma, Pancreas .a 116 to 978 1 to 854   available from MGC,   854/1113
(76 %)		 25 diff
(97.8 %id)
BG272585 head/neck, nasopharyngeal carcinoma .f 831 to 1092 265 to 4       262/265
(98 %)		 0 diff
(100 %id)
BG255941 adenocarcinoma, cell line, Prostate .a 3188 to 3911 1 to 716       715/998
(71 %)		 27 diff
(97.3 %id)
BG290444 bladder, transitional cell papilloma, cell line .a 4044 to 4686 1 to 641       641/1119
(57 %)		 7 diff
(99.4 %id)
BG248167 adenocarcinoma cell line, colon .a 3757 to 4471 1 to 705       707/708
(99 %)		 22 diff
(96.9 %id)
BG328037 adenocarcinoma cell line, colon .a 3086 to 3163 1 to 78       78/78
(100 %)		 3 diff
(96.2 %id)
BG338743 leiomyosarcoma cell line, uterus .a 3012 to 3754 1 to 737       737/737
(100 %)		 14 diff
(98.2 %id)
BG338792 leiomyosarcoma cell line, uterus .a 1793 to 2578 1 to 793       771/890
(86 %)		 34 diff
(96.2 %id)
BG676835 skin, squamous cell carcinoma .a 3414 to 4205 1 to 786       786/786
(100 %)		 22 diff
(97.3 %id)
BG676959 skin, squamous cell carcinoma .a 4790 to 5687 1 to 903       903/903
(100 %)		 12 diff
(98.7 %id)
BG678664 skin, squamous cell carcinoma .a 4915 to 5687 1 to 774       774/960
(80 %)		 8 diff
(99.2 %id)
BG678709 skin, squamous cell carcinoma .a 3568 to 4183 1 to 615       615/615
(100 %)		 1 diff
(99.9 %id)
BG680544 skin, squamous cell carcinoma .a 4705 to 5520 1 to 823       823/962
(85 %)		 16 diff
(98.4 %id)
BG698306 skin .a 5297 to 5685 1 to 389   AAA   389/389
(100 %)		 0 diff
(100 %id)
BI085553 astrocytoma grade IV, cell line, brain .a 4464 to 4988 1 to 538       428/715
(59 %)		 12 diff
(98.4 %id)
BM020362 astrocytoma grade IV, cell line, brain .a 2125 to 2395 1 to 271       271/271
(100 %)		 2 diff
(99.3 %id)
BM908273 astrocytoma grade IV, cell line, brain .a 2109 to 2762 1 to 655       655/1118
(58 %)		 6 diff
(99.5 %id)
BC044628 Brain, astrocytoma, grade IV .c 1 to 1610 1 to 1610 T232M I233V tiling clone, AAA   1610/4157
(38 %)		 5 diff
(99.9 %id)
BM908545 astrocytoma grade IV, cell line, brain .a 181 to 854 1 to 673       673/1077
(62 %)		 4 diff
(99.7 %id)
BM908872 astrocytoma grade IV, cell line, brain .a 2392 to 3144 17 to 769       753/1148
(65 %)		 14 diff
(98.8 %id)
BM809933 astrocytoma grade IV, cell line, brain .a 2117 to 3141 16 to 1033       1018/1120
(90 %)		 32 diff
(97.2 %id)
BM477807 leiomyosarcoma, uterus .a 3311 to 3958 2 to 663       671/1131
(59 %)		 28 diff
(97.6 %id)
CA487632   .a 4383 to 5163 1 to 787       787/914
(86 %)		 12 diff
(98.7 %id)
CA488866   .a 3347 to 4179 1 to 842       842/893
(94 %)		 21 diff
(97.7 %id)
CA488912   .a 4436 to 5324 1 to 901       901/910
(99 %)		 22 diff
(97.6 %id)
TI_59386614   .a 3870 to 4425 60 to 631       570/573
(99 %)		 18 diff
(96.9 %id)
TI_59391147   .a 2125 to 2852 105 to 828       722/764
(94 %)		 15 diff
(98.1 %id)
CB120762 Liver .a 5060 to 5659 1 to 600       600/600
(100 %)		 0 diff
(100 %id)
M63730   .a 1768 to 2812 1 to 1045       1045/1047
(99 %)		 1 diff
(100.0 %id)
M91669 foreskin .a 142 to 4810 1 to 4669 G428S S905F tiling clone,   4669/4669
(100 %)		 9 diff
(99.9 %id)
DA646288 mammary gland .a 78 to 853 2 to 777   capped   776/851
(91 %)		 5 diff
(99.5 %id)
DB360945 mammary gland .a 1511 to 2081 585 to 12   tiling clone,   574/595
(96 %)		 30 diff
(95.0 %id)
DA668262 esophagus .a 128 to 686 2 to 562   capped   561/561
(100 %)		 5 diff
(99.2 %id)
NM_000494.3   .a 78 to 5687 1 to 5610 exact RefSeq,   5610/5610
(100 %)		 0 diff
(100 %id)
DA713932   .a 79 to 644 2 to 567   capped   566/566
(100 %)		 0 diff
(100 %id)
DA713948   .a 79 to 644 2 to 567   capped   566/566
(100 %)		 0 diff
(100 %id)
DA762070 tongue .a 79 to 610 2 to 532   capped   531/531
(100 %)		 1 diff
(99.9 %id)
DA762844 tongue .a 81 to 650 2 to 571   capped   570/570
(100 %)		 1 diff
(99.9 %id)
CV569119 cornea, eye .a 886 to 1487 1 to 602       602/602
(100 %)		 1 diff
(99.9 %id)
CV572387 cornea, eye .a 159 to 779 1 to 621       621/621
(100 %)		 1 diff
(99.9 %id)
CV572718 cornea, eye .a 1084 to 1709 1 to 627       627/627
(100 %)		 3 diff
(99.6 %id)
CV572907 cornea, eye .a 1737 to 2325 1 to 589       589/589
(100 %)		 0 diff
(100 %id)
CV572996 cornea, eye .a 2830 to 3413 1 to 584   tiling clone,   584/584
(100 %)		 3 diff
(99.5 %id)
CV573210 cornea, eye .a 171 to 790 1 to 620       620/620
(100 %)		 0 diff
(100 %id)
CV573337 cornea, eye .a 100 to 724 1 to 625       625/625
(100 %)		 0 diff
(100 %id)
CV571398 cornea, eye .a 4833 to 5424 1 to 591       591/591
(100 %)		 2 diff
(99.7 %id)
CV573998 cornea, eye .a 570 to 1211 1 to 642       642/643
(99 %)		 2 diff
(99.7 %id)
CV574419 cornea, eye .a 5060 to 5687 634 to 8     Submitted on the opposite strand 627/634
(98 %)		 0 diff
(100 %id)
CV574871 cornea, eye .a 4084 to 4696 1 to 613       613/613
(100 %)		 0 diff
(100 %id)
CV575613 cornea, eye .a 4237 to 4852 1 to 616       616/616
(100 %)		 1 diff
(99.9 %id)
DA835647 placenta .a 99 to 647 2 to 550   capped   549/549
(100 %)		 0 diff
(100 %id)
DA836266 placenta .a 80 to 619 2 to 541   capped   540/540
(100 %)		 2 diff
(99.7 %id)
DA836776 placenta .a 78 to 634 2 to 558   capped   557/557
(100 %)		 1 diff
(99.9 %id)
DC380256 placenta .a 27 to 574 1 to 548       548/548
(100 %)		 1 diff
(99.9 %id)
DA839417 placenta .a 160 to 698 2 to 540   capped   539/539
(100 %)		 1 diff
(99.9 %id)
DA840090 placenta .a 79 to 623 2 to 546   capped   545/552
(98 %)		 2 diff
(99.7 %id)
DA840203 placenta .a 158 to 711 2 to 555   capped   554/554
(100 %)		 0 diff
(100 %id)
DA843596 placenta .a 79 to 665 2 to 588   capped   587/587
(100 %)		 3 diff
(99.5 %id)
DA844050 placenta .a 79 to 639 2 to 562   capped   561/561
(100 %)		 0 diff
(100 %id)
DA845634 placenta .a 79 to 643 2 to 566   capped   565/565
(100 %)		 1 diff
(99.9 %id)
DA845663 placenta .a 158 to 708 2 to 552   capped   551/551
(100 %)		 0 diff
(100 %id)
DA845920 placenta .a 78 to 638 2 to 562   capped   561/561
(100 %)		 1 diff
(99.9 %id)
DC381003 placenta .b 1 to 578 1 to 578       578/578
(100 %)		 2 diff
(99.7 %id)
DA848580 placenta .a 79 to 645 2 to 568   capped   567/567
(100 %)		 0 diff
(100 %id)
DA848928 placenta .a 158 to 737 2 to 581   capped   580/580
(100 %)		 0 diff
(100 %id)
DC381178 placenta .a 1 to 562 1 to 562   tiling clone,   562/563
(99 %)		 2 diff
(99.7 %id)
DA861059 placenta .a 82 to 660 2 to 581   capped   580/580
(100 %)		 1 diff
(99.9 %id)
DA861351 placenta .a 133 to 700 2 to 569   capped   568/568
(100 %)		 2 diff
(99.7 %id)
DC385362 rectum .a 36 to 609 1 to 574       574/574
(100 %)		 1 diff
(99.9 %id)
DC385452 rectum .a 35 to 585 1 to 551       551/551
(100 %)		 0 diff
(100 %id)
BM742296 stomach .a 2940 to 3547 1 to 608       608/608
(100 %)		 6 diff
(99.1 %id)
BM743046 stomach .a 2940 to 3567 1 to 628       628/628
(100 %)		 4 diff
(99.4 %id)
BM765978 stomach .f 1 to 420 1 to 420       420/420
(100 %)		 1 diff
(99.8 %id)
BM772041 stomach .a 2940 to 3568 1 to 628       628/628
(100 %)		 4 diff
(99.4 %id)
BM773425 stomach .f 1 to 649 1 to 649   tiling clone,   649/649
(100 %)		 1 diff
(99.9 %id)
BM837978 Ascites, stomach .a 161 to 805 1 to 645       645/645
(100 %)		 0 diff
(100 %id)
BM839106 Ascites, stomach .a 49 to 498 1 to 450       450/450
(100 %)		 1 diff
(99.8 %id)
T29336 Pancreas .a 4403 to 4666 1 to 264       264/264
(100 %)		 1 diff
(99.7 %id)
DB010537 colon, tumor tissue .a 78 to 541 2 to 466   capped   465/465
(100 %)		 2 diff
(99.6 %id)
DB123429 thymus .a 82 to 600 2 to 520   capped   519/519
(100 %)		 0 diff
(100 %id)
DB123538 thymus .a 88 to 630 2 to 544   capped   543/543
(100 %)		 1 diff
(99.9 %id)
DB130346 thymus .a 160 to 695 2 to 537   capped   536/536
(100 %)		 0 diff
(100 %id)
DB158105 thymus .d 1464 to 2038 2 to 576   tiling clone, capped   575/575
(100 %)		 0 diff
(100 %id)
DB346648 thymus .d 2728 to 3261 534 to 1   tiling clone,   534/534
(100 %)		 0 diff
(100 %id)
TI_149313953   .a 4797 to 5685 971 to 89   AAA   883/962
(91 %)		 21 diff
(97.9 %id)
TI_154003400   .a 854 to 1425 641 to 77   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 565/1006
(56 %)		 30 diff
(97.1 %id)
TI_158434314   .a 5171 to 5685 603 to 86   AAA   518/967
(53 %)		 12 diff
(98.8 %id)
CF528808 placenta .a 5234 to 5685 469 to 18   AAA   452/452
(100 %)		 1 diff
(99.8 %id)
CB305772 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5222 to 5685 483 to 19   AAA   465/465
(100 %)		 2 diff
(99.6 %id)
BM675955 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5219 to 5685 485 to 19   AAA   467/467
(100 %)		 2 diff
(99.6 %id)
BM674586 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5121 to 5685 583 to 19   AAA   565/565
(100 %)		 1 diff
(99.9 %id)
BM701587 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4645 to 5106 1 to 462       462/462
(100 %)		 2 diff
(99.6 %id)
TI_151741988   .a 1054 to 1299 378 to 133   fully sequenced,   246/378
(65 %)		 0 diff
(100 %id)
TI_153957898   .a 776 to 1302 80 to 605   fully sequenced,   526/605
(86 %)		 16 diff
(97.4 %id)
TI_1065986800   .a 4237 to 4852 1 to 616     This clone was ignored 616/616
(100 %)		 1 diff
(99.9 %id)
DA835647 placenta .a 99 to 647 2 to 550   capped   549/549
(100 %)		 0 diff
(100 %id)
DA836266 placenta .a 80 to 619 2 to 541   capped   540/540
(100 %)		 2 diff
(99.7 %id)
DA836776 placenta .a 78 to 634 2 to 558   capped   557/557
(100 %)		 1 diff
(99.9 %id)
DC380256 placenta .a 27 to 574 1 to 548       548/548
(100 %)		 1 diff
(99.9 %id)
DA839417 placenta .a 160 to 698 2 to 540   capped   539/539
(100 %)		 1 diff
(99.9 %id)
DA840090 placenta .a 79 to 623 2 to 546   capped   545/552
(98 %)		 2 diff
(99.7 %id)
DA840203 placenta .a 158 to 711 2 to 555   capped   554/554
(100 %)		 0 diff
(100 %id)
DA843596 placenta .a 79 to 665 2 to 588   capped   587/587
(100 %)		 3 diff
(99.5 %id)
DA844050 placenta .a 79 to 639 2 to 562   capped   561/561
(100 %)		 0 diff
(100 %id)
DA845634 placenta .a 79 to 643 2 to 566   capped   565/565
(100 %)		 1 diff
(99.9 %id)
DA845663 placenta .a 158 to 708 2 to 552   capped   551/551
(100 %)		 0 diff
(100 %id)
DA845920 placenta .a 78 to 638 2 to 562   capped   561/561
(100 %)		 1 diff
(99.9 %id)
DC381003 placenta .b 1 to 578 1 to 578       578/578
(100 %)		 2 diff
(99.7 %id)
DA848580 placenta .a 79 to 645 2 to 568   capped   567/567
(100 %)		 0 diff
(100 %id)
DA848928 placenta .a 158 to 737 2 to 581   capped   580/580
(100 %)		 0 diff
(100 %id)
DC381178 placenta .a 1 to 562 1 to 562   tiling clone,   562/563
(99 %)		 2 diff
(99.7 %id)
DA861059 placenta .a 82 to 660 2 to 581   capped   580/580
(100 %)		 1 diff
(99.9 %id)
DA861351 placenta .a 133 to 700 2 to 569   capped   568/568
(100 %)		 2 diff
(99.7 %id)
DC385362 rectum .a 36 to 609 1 to 574       574/574
(100 %)		 1 diff
(99.9 %id)
DC385452 rectum .a 35 to 585 1 to 551       551/551
(100 %)		 0 diff
(100 %id)
BM742296 stomach .a 2940 to 3547 1 to 608       608/608
(100 %)		 6 diff
(99.1 %id)
BM743046 stomach .a 2940 to 3567 1 to 628       628/628
(100 %)		 4 diff
(99.4 %id)
BM765978 stomach .f 1 to 420 1 to 420       420/420
(100 %)		 1 diff
(99.8 %id)
BM772041 stomach .a 2940 to 3568 1 to 628       628/628
(100 %)		 4 diff
(99.4 %id)
BM773425 stomach .f 1 to 649 1 to 649   tiling clone,   649/649
(100 %)		 1 diff
(99.9 %id)
BM837978 Ascites, stomach .a 161 to 805 1 to 645       645/645
(100 %)		 0 diff
(100 %id)
BM837978 Ascites, stomach .a 161 to 805 1 to 645       645/645
(100 %)		 0 diff
(100 %id)
BM839106 Ascites, stomach .a 49 to 498 1 to 450       450/450
(100 %)		 1 diff
(99.8 %id)
BM839106 Ascites, stomach .a 49 to 498 1 to 450       450/450
(100 %)		 1 diff
(99.8 %id)
T29336 Pancreas .a 4403 to 4666 1 to 264       264/264
(100 %)		 1 diff
(99.7 %id)
DB010537 colon, tumor tissue .a 78 to 541 2 to 466   capped   465/465
(100 %)		 2 diff
(99.6 %id)
DB123429 thymus .a 82 to 600 2 to 520   capped   519/519
(100 %)		 0 diff
(100 %id)
DB123538 thymus .a 88 to 630 2 to 544   capped   543/543
(100 %)		 1 diff
(99.9 %id)
DB130346 thymus .a 160 to 695 2 to 537   capped   536/536
(100 %)		 0 diff
(100 %id)
DB158105 thymus .d 1464 to 2038 2 to 576   tiling clone, capped   575/575
(100 %)		 0 diff
(100 %id)
DB346648 thymus .d 2728 to 3261 534 to 1   tiling clone,   534/534
(100 %)		 0 diff
(100 %id)
TI_149313953   .a 4797 to 5685 971 to 89   AAA   883/962
(91 %)		 21 diff
(97.9 %id)
TI_154003400   .a 854 to 1425 641 to 77   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 565/1006
(56 %)		 30 diff
(97.1 %id)
TI_158434314   .a 5171 to 5685 603 to 86   AAA   518/967
(53 %)		 12 diff
(98.8 %id)
CF528808 placenta .a 5234 to 5685 469 to 18   AAA   452/452
(100 %)		 1 diff
(99.8 %id)
CB305772 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5222 to 5685 483 to 19   AAA   465/465
(100 %)		 2 diff
(99.6 %id)
CB305772 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5222 to 5685 483 to 19   AAA   465/465
(100 %)		 2 diff
(99.6 %id)
BM675955 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5219 to 5685 485 to 19   AAA   467/467
(100 %)		 2 diff
(99.6 %id)
BM675955 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5219 to 5685 485 to 19   AAA   467/467
(100 %)		 2 diff
(99.6 %id)
BM674586 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5121 to 5685 583 to 19   AAA   565/565
(100 %)		 1 diff
(99.9 %id)
BM674586 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5121 to 5685 583 to 19   AAA   565/565
(100 %)		 1 diff
(99.9 %id)
BM701587 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4645 to 5106 1 to 462       462/462
(100 %)		 2 diff
(99.6 %id)
BM701587 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4645 to 5106 1 to 462       462/462
(100 %)		 2 diff
(99.6 %id)
TI_151741988   .a 1054 to 1299 378 to 133   fully sequenced,   246/378
(65 %)		 0 diff
(100 %id)
TI_153957898   .a 776 to 1302 80 to 605   fully sequenced,   526/605
(86 %)		 16 diff
(97.4 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j-u, .k-u, .l-u, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI