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Gene CETPTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
70 supporting clones for gene CETP back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK291586 placenta .a 114 to 1790 1 to 1677 S243P V422I     1677/1677
(100 %)
2 diff
(99.9 %id)
AK297699 lung .b 1 to 1541 1 to 1541 V362I tiling clone,   1541/1541
(100 %)
4 diff
(99.8 %id)
BC025739 Pancreas, Spleen, adult pooled .a 115 to 1790 1 to 1676 V422I available from MGC, AAA   1676/1676
(100 %)
1 diff
(100.0 %id)
BI041061 nervous_tumor .e-u 1 to 375 1 to 375 exact tiling clone,   375/375
(100 %)
0 diff
(100 %id)
BT020064   .b 62 to 1363 1 to 1302 V362I Q430K     1302/1302
(100 %)
2 diff
(99.9 %id)
BU580567 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .a 1169 to 1789 621 to 1       621/621
(100 %)
1 diff
(99.9 %id)
BU581023 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .a 923 to 1553 1 to 631       631/631
(100 %)
1 diff
(99.9 %id)
BX110628 liver and spleen .a 950 to 1139 1 to 193       193/197
(97 %)
8 diff
(96.0 %id)
CD687574 normal nasopharynx .a 124 to 719 37 to 632       596/632
(94 %)
6 diff
(99.1 %id)
CD709307 normal nasopharynx .a 100 to 591 19 to 510       492/510
(96 %)
7 diff
(98.7 %id)
CR599646 Placenta Cot 25-normalized .a 122 to 1787 1 to 1666 exact     1666/1666
(100 %)
0 diff
(100 %id)
CR622658 Placenta Cot 25-normalized .a 107 to 1759 1 to 1653 exact     1653/1653
(100 %)
0 diff
(100 %id)
BX459929 brain, fetal brain .a 144 to 1108 1 to 963       963/967
(99 %)
3 diff
(99.7 %id)
AL546493 placenta, Placenta Cot 25-normalized .a 107 to 1060 1 to 951       951/951
(100 %)
3 diff
(99.7 %id)
AL571820 placenta, Placenta Cot 25-normalized .a 788 to 1733 972 to 28       945/975
(96 %)
15 diff
(98.5 %id)
BX343861 Placenta Cot 25-normalized .a 785 to 1755 973 to 1       971/973
(99 %)
15 diff
(98.5 %id)
BX343862 Placenta Cot 25-normalized .a 107 to 1047 1 to 936       936/936
(100 %)
10 diff
(99.0 %id)
BX345751 Placenta Cot 25-normalized .a 119 to 1190 31 to 1092       1062/1117
(95 %)
24 diff
(97.9 %id)
AL552260 placenta, Placenta Cot 25-normalized .a 122 to 1109 1 to 987       987/987
(100 %)
9 diff
(99.1 %id)
AL575608 placenta, Placenta Cot 25-normalized .a 743 to 1756 1006 to 1       1006/1014
(99 %)
9 diff
(99.2 %id)
BX369344 Placenta Cot 25-normalized .a 991 to 1662 1 to 670       523/720
(72 %)
40 diff
(94.5 %id)
BX369345 Placenta Cot 25-normalized .a 991 to 1783 1 to 790       790/793
(99 %)
45 diff
(94.4 %id)
CV029484 mixed .a 131 to 763 1 to 633       633/633
(100 %)
0 diff
(100 %id)
DC354668 lung .a 74 to 651 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BJ995061 hepatoblastoma .a 101 to 700 1 to 600       600/600
(100 %)
0 diff
(100 %id)
BJ995062 hepatoblastoma .a 1400 to 1759 360 to 1       360/360
(100 %)
0 diff
(100 %id)
R89105 liver and spleen .a 1498 to 1778 281 to 1       281/281
(100 %)
2 diff
(99.3 %id)
R89213 liver and spleen .a 664 to 929 20 to 286       267/286
(93 %)
14 diff
(95.2 %id)
AA843190 parathyroid gland, parathyroid tumor .a 1054 to 1551 1 to 497     Submitted on the opposite strand 497/497
(100 %)
3 diff
(99.4 %id)
AA999853 Kidney .a 1102 to 1790 688 to 1   tiling clone,   688/814
(84 %)
12 diff
(98.6 %id)
AI022473 parathyroid gland, parathyroid tumor .a 1021 to 1507 1 to 486     Submitted on the opposite strand 486/486
(100 %)
7 diff
(98.6 %id)
AI021886 liver and spleen .a 1330 to 1790 459 to 1       459/492
(93 %)
12 diff
(97.6 %id)
AI074687 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d-u 1 to 472 473 to 1 I26S tiling clone,   473/473
(100 %)
5 diff
(99.0 %id)
AI095029 brain, glioblastoma (pooled) .a 1303 to 1791 492 to 6   tiling clone,   487/492
(98 %)
1 diff
(99.8 %id)
AI089788 brain, glioblastoma (pooled) .a 1383 to 1790 424 to 19   AAA   406/406
(100 %)
1 diff
(99.8 %id)
AI628058 Kidney .a 1389 to 1791 406 to 4       403/409
(98 %)
0 diff
(100 %id)
AI671147 pooled germ cell tumors .a 1595 to 1790 209 to 14   AAA   196/196
(100 %)
2 diff
(99.0 %id)
AI964062 pooled germ cell tumors .a 1596 to 1791 209 to 14   AAA   196/196
(100 %)
3 diff
(98.5 %id)
AW196951 pooled germ cell tumors .a 1596 to 1790 208 to 14   AAA   195/195
(100 %)
0 diff
(100 %id)
AW291164   .a 1320 to 1790 487 to 18   AAA   470/470
(100 %)
3 diff
(99.4 %id)
AW294938   .a 1352 to 1790 453 to 18   AAA   436/438
(99 %)
4 diff
(99.1 %id)
AW450046   .a 1425 to 1790 383 to 18   AAA   366/366
(100 %)
2 diff
(99.5 %id)
AW592688 pooled .a 1204 to 1789 589 to 6       584/589
(99 %)
17 diff
(97.2 %id)
BF515223   .a 1352 to 1790 453 to 15   AAA   439/439
(100 %)
2 diff
(99.6 %id)
BI819550 pooled brain, lung, testis .a 148 to 1067 1 to 925       925/1090
(84 %)
22 diff
(98.0 %id)
BI766164 pooled lung and spleen .a 127 to 957 1 to 829       829/830
(99 %)
8 diff
(99.1 %id)
BI772169 pooled lung and spleen .a 122 to 657 1 to 542       542/754
(71 %)
10 diff
(98.7 %id)
BI771118 pooled lung and spleen .c 1 to 784 1 to 783 F214L V215S Q216R T217Q R218G ... tiling clone,   783/783
(100 %)
2 diff
(99.8 %id)
BI834490 pooled pancreas and spleen .a 115 to 727 1 to 616       616/1150
(53 %)
6 diff
(99.5 %id)
BM007900 Spleen .a 288 to 855 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
BM914637 Spleen .a 118 to 655 1 to 538       538/968
(55 %)
1 diff
(99.9 %id)
BM919861 pooled pancreas and spleen .a 560 to 1452 1 to 892       894/1008
(88 %)
19 diff
(98.2 %id)
BQ068239 brain .a 87 to 966 1 to 886       886/979
(90 %)
11 diff
(98.9 %id)
BQ879525 dorsal root ganglia .a 119 to 1007 1 to 896       896/927
(96 %)
11 diff
(98.9 %id)
BQ710590 Spleen .a 301 to 1213 1 to 920       896/964
(92 %)
33 diff
(96.6 %id)
TI_57199408   .a 141 to 1113 27 to 1006       980/1123
(87 %)
28 diff
(97.6 %id)
TI_57177947   .a 124 to 957 108 to 939       832/940
(88 %)
13 diff
(98.7 %id)
TI_57180228   .a 115 to 657 48 to 596       549/808
(67 %)
15 diff
(98.2 %id)
TI_57182977   .c 1 to 784 91 to 873 F214L V215S Q216R T217Q R218G ...     783/873
(89 %)
8 diff
(99.1 %id)
TI_57164127   .a 115 to 727 36 to 651       616/1185
(51 %)
10 diff
(99.2 %id)
TI_59383293   .a 289 to 855 114 to 680       567/567
(100 %)
0 diff
(100 %id)
M30185 Liver .a 1 to 1787 1 to 1787 V422I tiling clone,   1787/1787
(100 %)
1 diff
(100.0 %id)
M83573 Liver .b 85 to 1541 1 to 1457       1457/1457
(100 %)
1 diff
(100.0 %id)
NM_000078.2   .a 74 to 1790 1 to 1717 exact RefSeq,   1717/1717
(100 %)
0 diff
(100 %id)
DA844927 placenta .a 115 to 661 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
TI_1948080522   .a 130 to 849 125 to 844   fully sequenced,   720/844
(85 %)
6 diff
(99.3 %id)
TI_1948080523   .a 819 to 1618 922 to 123   fully sequenced,   800/922
(86 %)
6 diff
(99.4 %id)
TI_1948080698   .a 130 to 819 133 to 822   fully sequenced,   690/822
(83 %)
6 diff
(99.3 %id)
TI_1948080699   .a 758 to 1618 979 to 119   fully sequenced,   861/979
(87 %)
6 diff
(99.4 %id)
TI_1948080878   .a 130 to 849 131 to 850   fully sequenced,   720/850
(84 %)
6 diff
(99.3 %id)
TI_1948080879   .a 819 to 1618 919 to 120   fully sequenced,   800/919
(87 %)
11 diff
(98.9 %id)
DR007200 Spleen .a 86 to 723 1 to 637       637/637
(100 %)
6 diff
(99.1 %id)
TI_154101554   .a 1150 to 1790 720 to 79   AAA   596/785
(75 %)
31 diff
(96.1 %id)
BU753737 placenta .a 1564 to 1787 241 to 18   AAA   224/224
(100 %)
2 diff
(99.2 %id)
BM694301 eye, RPE and Choroid .a 770 to 1307 1 to 538   fully sequenced,   538/538
(100 %)
1 diff
(99.9 %id)
BU730419 eye, RPE and Choroid .a 1246 to 1790 562 to 19   fully sequenced, AAA   544/544
(100 %)
3 diff
(99.5 %id)
TI_1948080523   .a 819 to 1618 922 to 123   fully sequenced,   800/922
(86 %)
6 diff
(99.4 %id)
TI_1948080698   .a 130 to 819 133 to 822   fully sequenced,   690/822
(83 %)
6 diff
(99.3 %id)
TI_1948080699 SC_11012_3_G7 CETP.aAug10 1618 119 SC_11012_3_G7     861 6
TI_1948080878 SC_11012_4_G7 CETP.aAug10 849 850 SC_11012_4_G7     720 6
TI_1948080879 SC_11012_4_G7 CETP.aAug10 1618 120 SC_11012_4_G7     800 11
DR007200 TC124106 CETP.aAug10 723 637 TC124106     637 6
TI_154101554 TI_154101554 CETP.aAug10 1790 79 TI_154101554     596 31
BU753737 UI-1-BB1p-aki-e-02-0-UI CETP.aAug10 1787 18 UI-1-BB1p-aki-e-02-0-UI     224 2
BM694301 UI-E-CI1-afp-i-12-0-UI CETP.aAug10 1307 538 UI-E-CI1-afp-i-12-0-UI     538 1
BM694301 UI-E-CI1-afp-i-12-0-UI CETP.aAug10 1307 538 UI-E-CI1-afp-i-12-0-UI     538 1
BU730419 UI-E-CI1-afp-i-12-0-UI CETP.aAug10 1790 19 UI-E-CI1-afp-i-12-0-UI     544 3
BU730419 UI-E-CI1-afp-i-12-0-UI CETP.aAug10 1790 19 UI-E-CI1-afp-i-12-0-UI     544 3
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI