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Gene C9orf84TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
65 supporting clones for gene C9orf84 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK057341 testis .e 2 to 1909 1 to 1908 exact tiling clone, available from FLJ,   1908/1908
(100 %)
0 diff
(100 %id)
AK126055 testis .b 1 to 5059 2 to 5058 L361A P362Y T363E K364S V365A ... tiling clone, available from FLJ,   5058/5058
(100 %)
9 diff
(99.9 %id)
AL833535 human testis .a 1 to 4611 3 to 4612 F94L V95* tiling clone, available from DKFZ, AAA   4612/4612
(100 %)
11 diff
(99.8 %id)
TI_2194695894   .e 1 to 1059 70 to 1122       1053/1276
(82 %)
20 diff
(98.5 %id)
TI_2194695900   .b 3780 to 4721 1045 to 105       941/1253
(75 %)
1 diff
(100.0 %id)
TI_2194697839   .b 4298 to 4721 6 to 427       422/1257
(33 %)
7 diff
(99.5 %id)
TI_2194697840   .d 2571 to 3628 1052 to 1       1052/1264
(83 %)
14 diff
(98.9 %id)
TI_2194697841   .d 509 to 1658 1 to 1128       1132/1242
(91 %)
25 diff
(98.0 %id)
TI_2194697842   .d 2238 to 3311 1074 to 5       1102/1258
(87 %)
17 diff
(98.7 %id)
TI_2194697843   .d 1010 to 2064 11 to 1059       1049/1257
(83 %)
17 diff
(98.7 %id)
TI_2194697844   .d 1797 to 2910 1110 to 9       1102/1279
(86 %)
11 diff
(99.2 %id)
TI_2194697845   .d 1220 to 2322 1097 to 6       1092/1275
(85 %)
16 diff
(98.8 %id)
TI_2194697848   .d 773 to 1827 1048 to 1       1048/1250
(83 %)
12 diff
(99.1 %id)
TI_2194697849   .d 314 to 1374 1067 to 9       1059/1311
(80 %)
2 diff
(99.9 %id)
TI_2194697850   .e 1 to 848 860 to 13       848/1257
(67 %)
6 diff
(99.6 %id)
TI_2194697851   .d 3122 to 4263 1142 to 9       1134/1301
(87 %)
12 diff
(99.1 %id)
TI_2194697852   .d 1533 to 2559 13 to 1034       1022/1253
(81 %)
10 diff
(99.3 %id)
TI_2194697853   .d 2250 to 2884 70 to 703       634/1298
(48 %)
51 diff
(96.1 %id)
TI_2194697856   .d 2535 to 3649 1 to 1104       1104/1266
(87 %)
17 diff
(98.7 %id)
TI_2194697857   .d 3520 to 4576 12 to 1059       1048/1260
(83 %)
14 diff
(98.9 %id)
TI_2194697858   .b 3957 to 4721 1 to 763       763/1265
(60 %)
5 diff
(99.7 %id)
TI_2194697888   .d 1753 to 2936 1183 to 12       1172/1306
(89 %)
20 diff
(98.5 %id)
TI_2194697889   .d 1334 to 2433 1106 to 11       1096/1276
(85 %)
6 diff
(99.6 %id)
TI_2194699143   .e 1 to 1100 71 to 1159       1089/1283
(84 %)
21 diff
(98.4 %id)
TI_2194699521   .b 3656 to 4721 1153 to 104       1050/1262
(83 %)
9 diff
(99.3 %id)
BG189555   .d 4460 to 4709 6 to 256   AAA   251/256
(98 %)
6 diff
(97.7 %id)
BG190093   .d 4455 to 4709 1 to 253   AAA   253/254
(99 %)
7 diff
(97.3 %id)
BG199216   .d 4455 to 4709 1 to 254   AAA   254/255
(99 %)
11 diff
(95.7 %id)
BX108004   .d 3540 to 4245 1 to 706       706/706
(100 %)
2 diff
(99.8 %id)
AL704322 human skeletal muscle .d 1 to 633 1 to 633   tiling clone,   633/633
(100 %)
1 diff
(99.9 %id)
DN916036   .i 482 to 805 325 to 1   tiling clone,   325/325
(100 %)
3 diff
(99.1 %id)
DN916037   .h 493 to 973 1 to 481   tiling clone,   481/481
(100 %)
2 diff
(99.6 %id)
DN920510   .h 493 to 958 1 to 466   tiling clone,   466/466
(100 %)
0 diff
(100 %id)
DR007965 pooled .d 3421 to 4104 1 to 684       684/684
(100 %)
2 diff
(99.8 %id)
DR007966 pooled .d 3773 to 4488 725 to 11     Submitted on the opposite strand 715/725
(98 %)
2 diff
(99.8 %id)
DR731159 pooled .d 3420 to 4133 1 to 714       714/714
(100 %)
3 diff
(99.6 %id)
DR731160 pooled .d 3743 to 4498 756 to 1     Submitted on the opposite strand 756/756
(100 %)
4 diff
(99.5 %id)
AA629020   .d 4279 to 4709 441 to 11   AAA   431/431
(100 %)
0 diff
(100 %id)
BE041500 pooled .d 4387 to 4710 328 to 4       325/328
(99 %)
2 diff
(99.4 %id)
CB046438 2 pooled tumors (clear cell type), Kidney .c 3897 to 4486 622 to 33   AAA   590/590
(100 %)
0 diff
(100 %id)
CB046439 2 pooled tumors (clear cell type), Kidney .c 1936 to 2393 10 to 467       458/467
(98 %)
8 diff
(98.3 %id)
BG722717 testis .b 20 to 553 10 to 548       543/548
(99 %)
15 diff
(97.3 %id)
BC041858 testis .c 1 to 4486 5 to 4488 C371V L372* tiling clone, available from MGC, AAA   4486/4484
(100 %)
13 diff
(99.8 %id)
BI460805 testis .b 20 to 617 10 to 612   tiling clone, available from MGC,   607/619
(98 %)
21 diff
(96.7 %id)
BQ435547 testis .d 3251 to 4033 1 to 787       787/790
(99 %)
20 diff
(97.5 %id)
BU568951 testis .g 1 to 674 1 to 679 N62X K64X K87X H108R S132F ... tiling clone, AAA   679/763
(88 %)
14 diff
(98.2 %id)
BC144680 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .d 78 to 4812 1 to 4735 L35F tiling clone,   4735/4735
(100 %)
2 diff
(100.0 %id)
BC112357 PCR rescued clones .e 9 to 1824 1 to 1816 exact     1816/1816
(100 %)
0 diff
(100 %id)
DA624668 Kidney .m 1 to 546 2 to 544   tiling clone, capped   543/543
(100 %)
4 diff
(99.3 %id)
NM_173521.3   .a 1 to 4611 8 to 4618 exact RefSeq, AAA   4618/4618
(100 %)
0 diff
(100 %id)
NM_001080551.1   .b 1 to 4610 2 to 4611 exact RefSeq, AAA   4611/4611
(100 %)
0 diff
(100 %id)
DB021483 testis .e 3 to 494 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
DB335952 testis .e 1383 to 1909 528 to 1       528/528
(100 %)
1 diff
(99.9 %id)
DB060619 testis .i 1 to 565 2 to 566   tiling clone, capped   565/569
(99 %)
1 diff
(99.9 %id)
DB064614 testis .f 1 to 594 2 to 597 L93P C153L M154Y D155G K156* tiling clone, capped   596/596
(100 %)
3 diff
(99.5 %id)
DB066092 testis .a 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DB066382 testis .j 1 to 528 8 to 535 exact tiling clone, capped   534/534
(100 %)
0 diff
(100 %id)
DB071244 testis .d 19 to 551 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DB076176 testis .l 6 to 555 2 to 551 exact tiling clone, capped   550/550
(100 %)
1 diff
(99.9 %id)
DB082005 testis .l 1 to 549 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
DB083826 testis .a 1 to 540 3 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DB088747 testis .b 1 to 547 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DB341280 testis .b 4519 to 5059 543 to 1       543/543
(100 %)
4 diff
(99.3 %id)
DB090401 testis .k 1 to 578 2 to 580 exact tiling clone, capped   579/579
(100 %)
2 diff
(99.7 %id)
DB097240 testis .e 3 to 597 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DB233486 trachea .h 1 to 577 2 to 579   tiling clone, capped   578/578
(100 %)
1 diff
(99.9 %id)
TI_837040456   .d 3409 to 3993 18 to 595   fully sequenced,   578/595
(97 %)
8 diff
(98.7 %id)
TI_837040457   .d 3963 to 4507 567 to 26   fully sequenced,   542/567
(95 %)
3 diff
(99.5 %id)
TI_891526480   .d 3982 to 4515 534 to 8   fully sequenced,   527/534
(98 %)
1 diff
(99.9 %id)
TI_891526481   .d 3409 to 4012 14 to 608   fully sequenced,   595/608
(97 %)
8 diff
(98.7 %id)
TI_891526480   .d 3982 to 4515 534 to 8   fully sequenced,   527/534
(98 %)
1 diff
(99.9 %id)
TI_891526481   .d 3409 to 4012 14 to 608   fully sequenced,   595/608
(97 %)
8 diff
(98.7 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C