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Gene ACN9TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
132 supporting clones for gene ACN9 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA316159 colon .a 1142 to 1664 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
AF201933   .a 1120 to 2063 1 to 944 exact AAA   944/944
(100 %)
4 diff
(99.6 %id)
AW902384 nervous_normal .a 1604 to 1923 322 to 3       320/322
(99 %)
0 diff
(100 %id)
BG941704 blood .a 1674 to 2065 410 to 19       392/410
(95 %)
0 diff
(100 %id)
BC020621 Liver .a 1127 to 2063 1 to 937 exact available from MGC, AAA   937/937
(100 %)
0 diff
(100 %id)
BC022858 Bone marrow, chronic myelogenous leukemia .a 1119 to 1616 1 to 498 exact available from MGC, AAA   498/498
(100 %)
3 diff
(99.4 %id)
BE932323 head_neck .a 1312 to 1580 10 to 276       267/276
(96 %)
6 diff
(97.9 %id)
BE932336 head_neck .a 1312 to 1580 29 to 298       270/298
(90 %)
6 diff
(98.0 %id)
BE932351 head_neck .a 1312 to 1580 10 to 276       267/276
(96 %)
6 diff
(97.9 %id)
BE932364 head_neck .a 1312 to 1580 29 to 298       270/298
(90 %)
6 diff
(98.0 %id)
BE933037 head_neck .a 1716 to 2032 1 to 315       315/326
(96 %)
6 diff
(98.2 %id)
BF087927 head_neck .a 1312 to 1580 33 to 300       268/300
(89 %)
6 diff
(98.0 %id)
BF830919 head_neck .a 1682 to 2016 1 to 333       333/333
(100 %)
3 diff
(99.1 %id)
BG182661   .a 1311 to 2061 1 to 752   AAA   752/752
(100 %)
8 diff
(99.0 %id)
BG184216   .a 1311 to 2065 1 to 753       753/780
(96 %)
17 diff
(97.9 %id)
BG185276   .a 1310 to 2063 1 to 753   AAA   753/753
(100 %)
19 diff
(97.5 %id)
BG192600   .a 1357 to 2063 40 to 745   AAA   706/745
(94 %)
6 diff
(99.2 %id)
BG193645   .a 1511 to 2042 533 to 1     Submitted on the opposite strand 533/913
(58 %)
14 diff
(98.5 %id)
BG195698   .a 1349 to 2063 34 to 745   AAA   712/745
(95 %)
6 diff
(99.2 %id)
BG196205   .f 1 to 646 36 to 672 S4L L7* tiling clone,   637/922
(69 %)
38 diff
(95.9 %id)
BG198726   .a 1357 to 2063 40 to 745   AAA   706/745
(94 %)
6 diff
(99.2 %id)
BG200287   .a 1308 to 2065 1 to 750       750/887
(84 %)
25 diff
(97.2 %id)
BG200898   .a 1311 to 2061 1 to 749   AAA   749/749
(100 %)
11 diff
(98.6 %id)
BG202874   .a 1308 to 2061 1 to 753       753/914
(82 %)
9 diff
(99.1 %id)
BG203391   .a 1308 to 2063 1 to 758   AAA   758/758
(100 %)
11 diff
(98.6 %id)
BG203861   .a 1312 to 2061 1 to 746       746/746
(100 %)
14 diff
(98.2 %id)
BG203862   .c 54 to 780 54 to 780   tiling clone, AAA   727/780
(93 %)
43 diff
(94.5 %id)
BG210169   .a 1308 to 1904 1 to 597   AAA   597/597
(100 %)
6 diff
(99.0 %id)
BG215484   .a 1309 to 1793 1 to 486       486/526
(92 %)
12 diff
(97.8 %id)
BG215485   .a 1312 to 2042 727 to 1     Submitted on the opposite strand 727/902
(80 %)
24 diff
(97.4 %id)
BG217616   .c 1 to 778 1 to 775 S5L R7E E8K K9T E10R ... tiling clone,   775/785
(98 %)
48 diff
(93.9 %id)
BG220616   .a 1338 to 2063 22 to 744   AAA   723/744
(97 %)
15 diff
(98.0 %id)
BX096064   .a 1134 to 1823 1 to 690 exact     690/690
(100 %)
1 diff
(99.9 %id)
BF726604 eye, lens .a 1076 to 1572 1 to 497 exact     497/497
(100 %)
0 diff
(100 %id)
CB151905 cervix, Uterine .a 1433 to 1993 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
CD683991 normal nasopharynx .a 1312 to 1538 157 to 383       227/383
(59 %)
6 diff
(98.5 %id)
CN428712 embryonic stem cells, DMSO-treated H9 cellline .a 1145 to 1597 1 to 454       454/454
(100 %)
5 diff
(98.9 %id)
CR745195 multiple sclerosis lesions .a 1129 to 1828 1 to 700 exact     700/700
(100 %)
1 diff
(99.9 %id)
AV713314   .b 1 to 579 1 to 578 G3L tiling clone,   578/630
(91 %)
13 diff
(98.0 %id)
BP227431   .a 1108 to 1690 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
DW467029 Liver .d-u 1117 to 1447 18 to 348 exact tiling clone,   331/348
(95 %)
6 diff
(98.3 %id)
R57922   .a 1197 to 1462 1 to 262       262/262
(100 %)
5 diff
(98.1 %id)
FN097616 breast carcinoma .a 1586 to 1688 102 to 1     Submitted on the opposite strand 102/102
(100 %)
1 diff
(99.1 %id)
FN113510 breast carcinoma .a 1445 to 1530 1 to 85       85/86
(98 %)
2 diff
(97.7 %id)
FN132641 breast carcinoma .d-u 1131 to 1210 1 to 79       79/79
(100 %)
4 diff
(95.0 %id)
FN174236 breast carcinoma .a 1857 to 1968 1 to 110       110/110
(100 %)
4 diff
(96.4 %id)
DB446644 testis .a 1450 to 1868 1 to 420       420/420
(100 %)
1 diff
(99.8 %id)
DB494499 hypothalamus .a 1123 to 1642 1 to 519 exact     519/519
(100 %)
4 diff
(99.3 %id)
DB565552 hypothalamus .a 1600 to 2062 1 to 463     Submitted on the opposite strand 463/464
(99 %)
2 diff
(99.6 %id)
DB503635 hypothalamus .a 1123 to 1592 1 to 469 exact     469/469
(100 %)
4 diff
(99.2 %id)
DB574872 hypothalamus .a 1592 to 2062 1 to 471     Submitted on the opposite strand 471/472
(99 %)
2 diff
(99.6 %id)
BP388687 pancreatic islet .a 1542 to 2049 1 to 510     Submitted on the opposite strand 510/511
(99 %)
3 diff
(99.5 %id)
BP389990 pancreatic islet .a 1625 to 2065 1 to 441     Submitted on the opposite strand 441/446
(98 %)
3 diff
(99.4 %id)
N20048 melanocyte .a 1657 to 2065 414 to 4       411/417
(98 %)
0 diff
(100 %id)
N42495 melanocyte .a 1156 to 1360 1 to 204       204/204
(100 %)
2 diff
(99.1 %id)
N71709 melanocyte .a 1862 to 2061 214 to 15   AAA   200/202
(99 %)
1 diff
(99.6 %id)
N99659 melanocyte .a 1154 to 1314 35 to 195       161/200
(80 %)
1 diff
(99.5 %id)
AA720010 pineal gland .a 1398 to 1674 285 to 9       277/285
(97 %)
0 diff
(100 %id)
AA416955   .a 1599 to 2067 474 to 6       469/474
(98 %)
0 diff
(100 %id)
AA469906   .a 1132 to 1537 14 to 417 P2R R4G H5R V6F R8S ...     404/417
(96 %)
6 diff
(98.6 %id)
AA430160   .a 1674 to 2065 397 to 6       392/397
(98 %)
0 diff
(100 %id)
AA729991 pooled germ cell tumors .a 1741 to 2066 326 to 1       326/326
(100 %)
1 diff
(99.7 %id)
AA810407 germinal center B cell .a 1607 to 2063 470 to 14   AAA   457/457
(100 %)
1 diff
(99.8 %id)
AA889020 parathyroid gland, parathyroid tumor .a 1621 to 2065 449 to 5       445/449
(99 %)
0 diff
(100 %id)
AI142321   .a 1126 to 1586 1 to 460 P2A H5T V6F S7L R8E ...     460/460
(100 %)
8 diff
(98.3 %id)
AI142357   .a 1126 to 1614 1 to 487 P2R R4G H5R V6F R8S ...     487/487
(100 %)
6 diff
(98.8 %id)
AI147351   .a 1680 to 2061 400 to 19   AAA   382/382
(100 %)
1 diff
(99.8 %id)
AI277087 adenocarcinoma, colon .a 1682 to 2063 382 to 1       382/386
(98 %)
1 diff
(99.8 %id)
AI277092 adenocarcinoma, colon .a 1752 to 2063 312 to 1       312/312
(100 %)
0 diff
(100 %id)
AI418404 brain, glioblastoma (pooled) .a 1619 to 2056 438 to 1       438/438
(100 %)
1 diff
(99.8 %id)
AI640867 Kidney .a 1617 to 2063 447 to 1       447/447
(100 %)
2 diff
(99.6 %id)
AI873845 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1642 to 2067 426 to 2       425/426
(99 %)
0 diff
(100 %id)
AW006468 colon .a 1557 to 2065 516 to 8       509/516
(98 %)
0 diff
(100 %id)
AW262617 brain, three pooled meningiomas .a 1655 to 2065 411 to 1       411/411
(100 %)
1 diff
(99.8 %id)
AW404075 lymph .a 1114 to 1533 1 to 420 exact     420/420
(100 %)
5 diff
(98.9 %id)
BF590127 pooled .a 1589 to 2058 472 to 1       472/472
(100 %)
18 diff
(96.2 %id)
BF431067 pooled .a 1686 to 2065 381 to 2       380/381
(99 %)
0 diff
(100 %id)
BF195933 Kidney .a 1534 to 2065 533 to 2       532/533
(99 %)
0 diff
(100 %id)
BE565822 bladder, carcinoma, cell line .e 34 to 538 1 to 513 Y2V L3S K4E R5Q K6E ...     513/774
(66 %)
30 diff
(96.2 %id)
BE565961 bladder, carcinoma, cell line .a 1174 to 1759 1 to 575       575/847
(67 %)
39 diff
(95.4 %id)
BE567066 bladder, carcinoma, cell line .a 1135 to 1814 1 to 678 H5T V6F R8S V9P R10G ...     678/820
(82 %)
55 diff
(93.3 %id)
BE893588 melanotic melanoma, skin .a 1156 to 1932 1 to 774       774/831
(93 %)
25 diff
(97.0 %id)
BE866368 bladder, carcinoma, cell line .e 24 to 655 1 to 629 F42L I59M G60W Q61T L62V ... tiling clone,   629/848
(74 %)
21 diff
(97.6 %id)
BF184509 bone marrow, from chronic myelogenous leukemia .a 1113 to 1814 1 to 689 F81L G82A T83P F84S L85S ...     689/719
(95 %)
29 diff
(96.0 %id)
BF692952 muscle (skeletal) .a 1122 to 1759 1 to 638 L12C Y13T K14S R15A V16S ...     638/902
(70 %)
24 diff
(97.4 %id)
BF693410 muscle (skeletal) .a 1113 to 1828 1 to 716 H5T V6F R8S V9P R10G ...     716/717
(99 %)
52 diff
(92.8 %id)
BF698878 brain, primitive neuroectoderm .a 1172 to 1729 1 to 554   AAA   554/809
(68 %)
21 diff
(97.5 %id)
BF696861 brain, primitive neuroectoderm .e 7 to 645 1 to 638 K6T F7L L8S F9V H10S ... tiling clone,   638/814
(78 %)
36 diff
(95.6 %id)
BF977052 melanotic melanoma, high MDR, skin .a 1123 to 1815 1 to 693 L27S K28N S29P L30W G31A ...     693/900
(77 %)
19 diff
(97.9 %id)
BF977430 melanotic melanoma, high MDR, skin .a 1119 to 1815 1 to 685 L27S K28N S29P L30W G31A ...     685/855
(80 %)
23 diff
(97.4 %id)
BF691011 melanotic melanoma, high MDR, skin .e 1 to 754 1 to 754 T44H F45L L46P E48R E49R ... tiling clone,   754/800
(94 %)
34 diff
(95.8 %id)
BG166197 hypernephroma, cell line, Kidney .a 1360 to 2068 1 to 708       708/737
(96 %)
10 diff
(98.7 %id)
BG260124 bladder, transitional cell papilloma, cell line .a 1592 to 2065 1 to 475       475/546
(86 %)
3 diff
(99.5 %id)
BG260388 bladder, transitional cell papilloma, cell line .a 1593 to 2063 1 to 469   AAA   469/469
(100 %)
3 diff
(99.4 %id)
BG431422 Kidney .a 1122 to 1964 1 to 832 L12C Y13T K14S R15A V16S ...     832/836
(99 %)
24 diff
(97.2 %id)
BG530419 embryonal carcinoma, testis .a 1175 to 1849 1 to 675       675/676
(99 %)
4 diff
(99.5 %id)
BG547100 lung .a 1122 to 1848 1 to 722 F81L G82A T83P F84S L85S ...     722/722
(100 %)
7 diff
(99.1 %id)
BG568335 Liver .a 1161 to 1772 1 to 611       611/611
(100 %)
2 diff
(99.7 %id)
BG618011 Liver .a 1126 to 1932 1 to 803 exact     803/804
(99 %)
18 diff
(97.8 %id)
BC028409 testis .a 1 to 2061 1 to 2061 exact tiling clone, available from MGC, AAA   2061/2061
(100 %)
6 diff
(99.8 %id)
BG716933 testis .d-u 1 to 644 1 to 644   tiling clone, available from MGC,   644/644
(100 %)
6 diff
(99.1 %id)
BI255401 cervical carcinoma cell line, cervix .a 1134 to 1894 1 to 779 exact     779/780
(99 %)
20 diff
(97.5 %id)
BI757307 brain .a 1127 to 1967 1 to 839 exact     839/841
(99 %)
9 diff
(99.0 %id)
BI858390 breast, mammary adenocarcinoma, cell line .a 1145 to 1862 1 to 718       718/718
(100 %)
1 diff
(99.9 %id)
BM449806 melanotic melanoma, skin .a 1136 to 2034 1 to 903 exact     903/906
(99 %)
14 diff
(98.5 %id)
BM478276 eye, retinoblastoma .a 1134 to 1612 1 to 481 G3L H5Y N112H P123S     481/1256
(38 %)
30 diff
(97.7 %id)
BQ278235 mixed (pool of 40 RNAs) .a 1114 to 1886 1 to 783 exact     783/893
(87 %)
19 diff
(97.9 %id)
BU784747 Pancreas, Purified pancreatic islet .a 1694 to 2071 378 to 1   fully sequenced,   378/378
(100 %)
9 diff
(97.7 %id)
BU786476 Pancreas, Purified pancreatic islet .a 1132 to 1724 1 to 593 K14Q fully sequenced,   593/593
(100 %)
4 diff
(99.4 %id)
BQ898406 sympathetic trunk .a 1132 to 1701 1 to 569 exact     569/855
(66 %)
23 diff
(97.4 %id)
BU598591 mixed (pool of 40 RNAs) .a 1137 to 1886 1 to 757 exact     757/820
(92 %)
13 diff
(98.5 %id)
CA941314 Pancreas, Purified pancreatic islet .a 1720 to 2065 352 to 7       346/356
(97 %)
0 diff
(100 %id)
CA941608 Pancreas, Purified pancreatic islet .a 1237 to 1688 1 to 451       451/451
(100 %)
3 diff
(99.4 %id)
BU851962 mixed (pool of 40 RNAs) .a 1121 to 1548 1 to 428 exact     428/432
(99 %)
2 diff
(99.6 %id)
BU853979 testis .a 1141 to 1760 1 to 638       638/784
(81 %)
38 diff
(95.2 %id)
BU927619 mixed (pool of 40 RNAs) .a 1167 to 1912 1 to 749       749/795
(94 %)
11 diff
(98.7 %id)
BU932717 mixed (pool of 40 RNAs) .a 1476 to 2068 1 to 593       593/836
(70 %)
8 diff
(99.1 %id)
BU933161 mixed (pool of 40 RNAs) .a 1111 to 1620 1 to 516 exact     516/804
(64 %)
13 diff
(98.4 %id)
CA453447 mixed (pool of 40 RNAs) .a 1111 to 1802 1 to 704 M105V     704/806
(87 %)
20 diff
(97.6 %id)
CD557710 testis .d-u 66 to 946 27 to 912   tiling clone,   886/916
(96 %)
6 diff
(99.4 %id)
TI_57220519   .a 1118 to 1967 30 to 877 exact     848/879
(96 %)
14 diff
(98.5 %id)
TI_57187021   .a 1145 to 1862 58 to 775       718/718
(100 %)
1 diff
(99.9 %id)
NM_020186.2   .a 9 to 2063 1 to 2055 exact RefSeq, AAA   2055/2055
(100 %)
0 diff
(100 %id)
BM738825 Ascites, stomach .a 1754 to 2063 1 to 310   AAA   310/310
(100 %)
2 diff
(99.4 %id)
BM821258 stomach .e 9 to 405 1 to 397       397/397
(100 %)
1 diff
(99.8 %id)
DN991666 brain, whole brain .a 1100 to 1857 1 to 758 L104P     758/758
(100 %)
6 diff
(99.3 %id)
TI_154140949   .a 1120 to 1677 78 to 635 exact     558/560
(99 %)
3 diff
(99.5 %id)
TI_157608958   .a 1556 to 2065 627 to 118       510/628
(81 %)
0 diff
(100 %id)
TI_157609622   .a 1486 to 2063 683 to 107   AAA   577/578
(99 %)
11 diff
(98.1 %id)
BQ010788 placenta .a 1589 to 2063 492 to 18   AAA   475/475
(100 %)
3 diff
(99.4 %id)
BQ012414 placenta .a 1665 to 2063 417 to 19   AAA   399/399
(100 %)
1 diff
(99.8 %id)
CF529807 placenta .a 1576 to 2063 506 to 19   AAA   488/488
(100 %)
1 diff
(99.8 %id)
CF529956 placenta .a 1632 to 2063 448 to 17   AAA   432/432
(100 %)
1 diff
(99.8 %id)
BM704439.
matches multiple genes
eye, Retina Foveal and Macular .a 1137 to 1593 1 to 457 exact   Submitted on the opposite strand, also hits gene PLOD2 457/457
(100 %)
1 diff
(99.8 %id)
BU625859 cell lines, Enchondroma .a 1229 to 1953 743 to 19   AAA   725/725
(100 %)
0 diff
(100 %id)
BF681562 Prostate .a 1694 to 2071 378 to 1     Suspected internal deletion, this clone was ignored 378/378
(100 %)
9 diff
(97.7 %id)
BM829769 stomach .a 1132 to 1724 1 to 593     Suspected internal deletion, this clone was ignored 593/593
(100 %)
4 diff
(99.4 %id)
BU786476 Pancreas, Purified pancreatic islet .a 1132 to 1724 1 to 593 K14Q fully sequenced,   593/593
(100 %)
4 diff
(99.4 %id)
BQ898406 sympathetic trunk .a 1132 to 1701 1 to 569 exact     569/855
(66 %)
23 diff
(97.4 %id)
BU598591 mixed (pool of 40 RNAs) .a 1137 to 1886 1 to 757 exact     757/820
(92 %)
13 diff
(98.5 %id)
CA941314 Pancreas, Purified pancreatic islet .a 1720 to 2065 352 to 7       346/356
(97 %)
0 diff
(100 %id)
CA941314 Pancreas, Purified pancreatic islet .a 1720 to 2065 352 to 7       346/356
(97 %)
0 diff
(100 %id)
CA941608 Pancreas, Purified pancreatic islet .a 1237 to 1688 1 to 451       451/451
(100 %)
3 diff
(99.4 %id)
CA941608 Pancreas, Purified pancreatic islet .a 1237 to 1688 1 to 451       451/451
(100 %)
3 diff
(99.4 %id)
BU851962 mixed (pool of 40 RNAs) .a 1121 to 1548 1 to 428 exact     428/432
(99 %)
2 diff
(99.6 %id)
BU853979 testis .a 1141 to 1760 1 to 638       638/784
(81 %)
38 diff
(95.2 %id)
BU927619 mixed (pool of 40 RNAs) .a 1167 to 1912 1 to 749       749/795
(94 %)
11 diff
(98.7 %id)
BU932717 mixed (pool of 40 RNAs) .a 1476 to 2068 1 to 593       593/836
(70 %)
8 diff
(99.1 %id)
BU933161 mixed (pool of 40 RNAs) .a 1111 to 1620 1 to 516 exact     516/804
(64 %)
13 diff
(98.4 %id)
CA453447 mixed (pool of 40 RNAs) .a 1111 to 1802 1 to 704 M105V     704/806
(87 %)
20 diff
(97.6 %id)
CD557710 testis .d-u 66 to 946 27 to 912   tiling clone,   886/916
(96 %)
6 diff
(99.4 %id)
TI_57220519   .a 1118 to 1967 30 to 877 exact     848/879
(96 %)
14 diff
(98.5 %id)
TI_57187021   .a 1145 to 1862 58 to 775       718/718
(100 %)
1 diff
(99.9 %id)
NM_020186.2   .a 9 to 2063 1 to 2055 exact RefSeq, AAA   2055/2055
(100 %)
0 diff
(100 %id)
BM738825 Ascites, stomach .a 1754 to 2063 1 to 310   AAA   310/310
(100 %)
2 diff
(99.4 %id)
BM738825 Ascites, stomach .a 1754 to 2063 1 to 310   AAA   310/310
(100 %)
2 diff
(99.4 %id)
BM821258 stomach .e 9 to 405 1 to 397       397/397
(100 %)
1 diff
(99.8 %id)
DN991666 brain, whole brain .a 1100 to 1857 1 to 758 L104P     758/758
(100 %)
6 diff
(99.3 %id)
DN991666 brain, whole brain .a 1100 to 1857 1 to 758 L104P     758/758
(100 %)
6 diff
(99.3 %id)
TI_154140949   .a 1120 to 1677 78 to 635 exact     558/560
(99 %)
3 diff
(99.5 %id)
TI_157608958   .a 1556 to 2065 627 to 118       510/628
(81 %)
0 diff
(100 %id)
TI_157609622   .a 1486 to 2063 683 to 107   AAA   577/578
(99 %)
11 diff
(98.1 %id)
BQ010788 placenta .a 1589 to 2063 492 to 18   AAA   475/475
(100 %)
3 diff
(99.4 %id)
BQ012414 placenta .a 1665 to 2063 417 to 19   AAA   399/399
(100 %)
1 diff
(99.8 %id)
CF529807 placenta .a 1576 to 2063 506 to 19   AAA   488/488
(100 %)
1 diff
(99.8 %id)
CF529956 placenta .a 1632 to 2063 448 to 17   AAA   432/432
(100 %)
1 diff
(99.8 %id)
BM704439.
matches multiple genes
eye, Retina Foveal and Macular .a 1137 to 1593 1 to 457 exact   Submitted on the opposite strand, also hits gene PLOD2 457/457
(100 %)
1 diff
(99.8 %id)
BM704439.
matches multiple genes
eye, Retina Foveal and Macular .a 1137 to 1593 1 to 457 exact   Submitted on the opposite strand, also hits gene PLOD2 457/457
(100 %)
1 diff
(99.8 %id)
BU625859 cell lines, Enchondroma .a 1229 to 1953 743 to 19   AAA   725/725
(100 %)
0 diff
(100 %id)
BU625859 cell lines, Enchondroma .a 1229 to 1953 743 to 19   AAA   725/725
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C