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Report for CCDS19382.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19382.1 Public Mus musculus 5 Ugt2b1 23 108 98 CCDS HistoryNCBI Gene:71773Re-query CCDS DB by CCDS ID:19382.1Re-query CCDS DB by GeneID:71773See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 19382.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031183.2 ENSMUSP00000031183.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031183.2Link to Ensembl Protein Viewer:ENSMUSP00000031183.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000031183Re-query CCDS DB by Protein ID:ENSMUSP00000031183
Original member Current member NCBI NM_152811.1 NP_690024.1 Accepted alive Link to Nucleotide Sequence:NM_152811.1Link to Protein Sequence:NP_690024.1Re-query CCDS DB by Nucleotide ID:NM_152811Re-query CCDS DB by Protein ID:NP_690024Link to BLAST:NP_690024.1

Chromosomal Locations for CCDS 19382.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 86917589 86917865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 86919250 86919469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 86919605 86919692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 86921876 86922007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 86924548 86924696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 86925775 86926498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGTCTATGAAACAGGCTTCAGTTTTTCTGTTGATACAGTTCATATGCTATATTAGACCTGGAGCCTGTG
GGAAAGTGCTGGTGTGGCCTACAGAATACAGCCATTGGATAAATATGAAAATAATCCTGGATGAACTTGT
CCAGAGAGGTCATGACGTCACCGTTCTCATATCTTCTGCTTCCATCCTCATTGGGCCGAGCAATGAATCT
TCTATTAATTTTGAAATTTATTCTGCACCTTTGAGTAAAGATGATCTTGAATATGCTTTTGAAAAATGGG
TAGGAAACTGGACATACGAATTAAAAAAACTTCCATTTTGGACATCTTATTCAAAACTGCAAAAAATCTC
CAGTGAATATTCAGACATGATTGAAAGTTTCTGCAAAGCAGTAGTTTGGAACAAGAGCCTCATGAAAAAA
CTCCAAGGATCTAAGTTTGATGTCGTTCTAGCAGATGCCTTGGTTCCCTGTGGTGAGCTGCTATCAGAAC
TGCTTAAGACACCTTTAGTATACAGTCTCCGCTTCTGTCCTGGATACAAATGTGAAAAGTACAGTGGGGG
CCTTCCACTCCCCCCTTCCTATGTGCCTGTGGTTCTGTCAGAACTAAGTGACCACATGACATTTGCAGAA
AGGGTGAAGAATATGTTGCAGGTGTTGCTTTTTGACTTTTGGTTTCAAACATTTAACGAGAAATCCTGGA
ATCAGTTTTACAGTGATGTTCTAGGGAGACCTACAACATTAACTGAGATGATGGGGAAGGCAGACATATG
GCTCGTTCGAACCTTCTGGGACTTGAAATTTCCTCACCCTTTCTTGCCTAATTTTGACTTTGTTGGAGGA
CTCCATTGTAAACCAGCCAAACCACTGCCTAAGGAAATGGAAGAATTTGTTCAGAGCTCTGGAGAACATG
GTGTGGTGGTGTTTTCTCTGGGATCAATGGTTAAAAACATTAAAGAAGAAAAGGCCAATGTAGTTGCTTC
TGCTCTTGCCCAGATTCCACAGAAGGTTCTGTGGAGATTTGATGGTAAGAAACCAGACACCTTAGGATCC
AACACTCGGCTCTACAAGTGGATCCCCCAGAATGACCTTCTTGGTCATCCAAAAACCAAAGCTTTTATAG
CTCATGGTGGAACCAATGGCATCTATGAGGCGATCTACCATGGCATTCCTATTGTTGGTATTCCCTTGTT
TGGGGATCAACCTGATAATATTAACCACATAGTAGCCAAGGGAGCAGCTGTTAGAGTGGACTTTGATACA
ATGTCAACTACAGACCTTCTCACTGCCTTGAAGACTGTCATTAATGACCCTTCCTATAAAGAGAATGCCA
TGAGATTATCCAGAATCCACCATGACCAGCCAATGAAGCCCTTGGACCGAGCTGTCTTCTGGATCGAGTA
TGTCATGCGCAACAAGGGAGCCAAGCACCTTCGCCCAGCTCTGCATGACCTTACCTGGTTCCAGTACCAC
TCTCTGGATGTGATTGGGTTCCTATTGGTCTGTGTGGTAGCTGTGGTATTCATCATTGCAAAATGTTGCC
TCTTTTGTTGCCATAAGACTGCTAACATGGGAAAGAAGAAAAAAGAGTAG

Translation (529 aa):
MSMKQASVFLLIQFICYIRPGACGKVLVWPTEYSHWINMKIILDELVQRGHDVTVLISSASILIGPSNES
SINFEIYSAPLSKDDLEYAFEKWVGNWTYELKKLPFWTSYSKLQKISSEYSDMIESFCKAVVWNKSLMKK
LQGSKFDVVLADALVPCGELLSELLKTPLVYSLRFCPGYKCEKYSGGLPLPPSYVPVVLSELSDHMTFAE
RVKNMLQVLLFDFWFQTFNEKSWNQFYSDVLGRPTTLTEMMGKADIWLVRTFWDLKFPHPFLPNFDFVGG
LHCKPAKPLPKEMEEFVQSSGEHGVVVFSLGSMVKNIKEEKANVVASALAQIPQKVLWRFDGKKPDTLGS
NTRLYKWIPQNDLLGHPKTKAFIAHGGTNGIYEAIYHGIPIVGIPLFGDQPDNINHIVAKGAAVRVDFDT
MSTTDLLTALKTVINDPSYKENAMRLSRIHHDQPMKPLDRAVFWIEYVMRNKGAKHLRPALHDLTWFQYH
SLDVIGFLLVCVVAVVFIIAKCCLFCCHKTANMGKKKKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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