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Report for CCDS33055.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33055.1 Public Homo sapiens 19 MYPOP 24 110 108 CCDS HistoryNCBI Gene:339344Re-query CCDS DB by CCDS ID:33055.1Re-query CCDS DB by GeneID:339344See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33055.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322217.6 ENSP00000325402.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322217.6Link to Ensembl Protein Viewer:ENSP00000325402.4Re-query CCDS DB by Nucleotide ID:ENST00000322217Re-query CCDS DB by Protein ID:ENSP00000325402
Original member Current member NCBI NM_001012643.4 NP_001012661.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012643.4Link to Protein Sequence:NP_001012661.1Re-query CCDS DB by Nucleotide ID:NM_001012643Re-query CCDS DB by Protein ID:NP_001012661Link to BLAST:NP_001012661.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012661.1 399 Q86VE0 399 100% 0 0

Chromosomal Locations for CCDS 33055.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45890623 45891323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45901275 45901773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1200 nt):
ATGGCCTCGGCGGCGGCGGGCGAAGCGGAGGAAACCACCCGGTTGCGCAAGCCGCGCTTCTCATTCGAAG
AGAACCAGATCCTGATCCGCGAGGTGCGCGCCCACTACCCGCAGCTCTACGGCGCGCAGAGCCGTCGGGT
GAGCGTGGCAGAGCGGCGGCGCGTGTGGGACGGCATCGCCGCCAAGATCAACGGTATCACCAGCTGGAAG
CGCACGGGCCAGGAGGTGCAGAAGCGCTGGAACGACTTCAAGCGCCGCACCAAGGAGAAGCTCGCTCGCG
TGCCGCACTCCACGCAGGGCGCCGGGCCCGCCGCGGAGGACGCTTTCTCCGCGGAAGAGGAGACCATTTT
TGCCATCCTGGGGCCAGGTGTGGCGGCGCCGGGGGCAGGTGCTGGGGCGGAGGAGCCCCCTGCGGCCCCC
TCTTCACAGCCGCCGCCCCCAAGCGCCTGCCCTCAGCGCTACGTGTTGTCGGAAGACCGCCGGGAGGACC
GACGTGCAGATACATCAGCCCACAGCAAGGCGGGCTCCAGCAGCCCGGAGCCATGGGCCCGGCCCTCCTG
CACTCCCCAGGAAGGGGGCTGCCCACGGCCCAAGGAGCGTGAGTCACCACCCCCTTCGGCCCTGCAGCCG
GTCCAGCTGCCTCGCCTGGCCTTGTCTCCACCACCCCCAGCCCCTCCACTGCCACCCCCACCGCCACTGG
CCCAAGTGGCACCCTCACCCCCTAGCCCCCCACCCCCTCCTCGGCCTCCACCCACGCTCTCGGCCTCAGA
CCCCTCCCTGGACTTCCTGCGGGCCCAGCAGGAGACTGCCAACGCCATCCGGGAGCTGGCCGGCACCCTT
CGACAGGGACTGGCCAAACTGAGCGAGGCCCTCAGCGCTCTGCTGCCCCTTCTGCCAGGAACCCCAGTTG
ACTCCCTGCCTCCACCTCTGCCCCCACCCCCACCCCCACCGCCACCTCCCAGGCCTGTCCTGCCCCCACC
GGCCCCCAAGGTGGAGATCACCCCAGAGCCCGTGTCCGTGGTGGCTGCTGTGGTGGACGGGGCAGTGGTG
GCAGCCAGGGGAGTGATCATTGCCCCAAGGAGCGAGGAGGGGGCACCCCGGCCCCCCCCAGCCCCGCTCC
CTCCGCACGACTCCCCCCCACACAAGCGGAGAAAAGGTTTCCCTACACGGAAAAGGCGCGGCCGATGGAA
ATCTCCGTGA

Translation (399 aa):
MASAAAGEAEETTRLRKPRFSFEENQILIREVRAHYPQLYGAQSRRVSVAERRRVWDGIAAKINGITSWK
RTGQEVQKRWNDFKRRTKEKLARVPHSTQGAGPAAEDAFSAEEETIFAILGPGVAAPGAGAGAEEPPAAP
SSQPPPPSACPQRYVLSEDRREDRRADTSAHSKAGSSSPEPWARPSCTPQEGGCPRPKERESPPPSALQP
VQLPRLALSPPPPAPPLPPPPPLAQVAPSPPSPPPPPRPPPTLSASDPSLDFLRAQQETANAIRELAGTL
RQGLAKLSEALSALLPLLPGTPVDSLPPPLPPPPPPPPPPRPVLPPPAPKVEITPEPVSVVAAVVDGAVV
AARGVIIAPRSEEGAPRPPPAPLPPHDSPPHKRRKGFPTRKRRGRWKSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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