NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS47064.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47064.1 Public Homo sapiens 4 GNRHR 24 110 108 CCDS HistoryNCBI Gene:2798Re-query CCDS DB by CCDS ID:47064.1Re-query CCDS DB by GeneID:2798See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47064.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000420975.2 ENSP00000397561.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420975.2Link to Ensembl Protein Viewer:ENSP00000397561.2Re-query CCDS DB by Nucleotide ID:ENST00000420975Re-query CCDS DB by Protein ID:ENSP00000397561
Original member Current member NCBI NM_001012763.2 NP_001012781.1 Accepted alive Link to Nucleotide Sequence:NM_001012763.2Link to Protein Sequence:NP_001012781.1Re-query CCDS DB by Nucleotide ID:NM_001012763Re-query CCDS DB by Protein ID:NP_001012781Link to BLAST:NP_001012781.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012781.1 249 P30968-2 249 100% 0 0

Chromosomal Locations for CCDS 47064.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 67740589 67740724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67744568 67744659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67753814 67754335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGGCAAACAGTGCCTCTCCTGAACAGAATCAAAATCACTGTTCAGCCATCAACAACAGCATCCCACTGA
TG
CAGGGCAACCTCCCCACTCTGACCTTGTCTGGAAAGATCCGAGTGACGGTTACTTTCTTCCTTTTTCT
G
CTCTCTGCGACCTTTAATGCTTCTTTCTTGTTGAAACTTCAGAAGTGGACACAGAAGAAAGAGAAAGGG
AAA
AAGCTCTCAAGAATGAAGCTGCTCTTAAAACATCTGACCTTAGCCAACCTGTTGGAGACTCTGATTG
TC
ATGCCACTGGATGGGATGTGGAACATTACAGTCCAATGGTATGCTGGAGAGTTACTCTGCAAAGTTCT
C
AGTTATCTAAAGCTTTTCTCCATGTATGCCCCAGCCTTCATGATGGTGGTGATCAGCCTGGACCGCTCC
CTG
GCTATCACGAGGCCCCTAGCTTTGAAAAGCAACAGCAAAGTCGGACAGTCCATGGTTGGCCTGGCCT
GG
ATCCTCAGTAGTGTCTTTGCAGGACCACAGCTGCCTCTTCATCATCCCTCTTTTCATCATGCTGATCT
G
CAATGCAAAAATCATCTTCACCCTGACACGGGTCCTTCATCAGGACCCCCACGAACTACAACTGAATCA
GTC
CAAGAACAATATACCAAGAGCACGGCTGAAGACTCTAAAAATGACGGTTGCATTTGCCACTTCATTT
AC
TGTCTGCTGGACTCCCTACTATGTCCTAGGAATTTGGTATTGGTTTGA


Translation (249 aa):
MANSASPEQNQNHCSAINNSIPLMQGNLPTLTLSGKIRVTVTFFLFLLSATFNASFLLKLQKWTQKKEKG
K
KLSRMKLLLKHLTLANLLETLIVMPLDGMWNITVQWYAGELLCKVLSYLKLFSMYAPAFMMVVISLDRS
L
AITRPLALKSNSKVGQSMVGLAWILSSVFAGPQ
LPLHHPSFHHADLQCKNHLHPDTGPSSGPPRTTTES
V
QEQYTKSTAEDSKNDGCICHFIYCLLDSLLCPRNLVLV




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser