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Report for CCDS61694.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61694.1 Public Homo sapiens 15 LRRC49 24 110 108 CCDS HistoryNCBI Gene:54839Re-query CCDS DB by CCDS ID:61694.1Re-query CCDS DB by GeneID:54839See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61694.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544974.6 ENSP00000439600.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544974.6Link to Ensembl Protein Viewer:ENSP00000439600.2Re-query CCDS DB by Nucleotide ID:ENST00000544974Re-query CCDS DB by Protein ID:ENSP00000439600
Original member Current member NCBI NM_001284357.2 NP_001271286.1 Accepted alive Link to Nucleotide Sequence:NM_001284357.2Link to Protein Sequence:NP_001271286.1Re-query CCDS DB by Nucleotide ID:NM_001284357Re-query CCDS DB by Protein ID:NP_001271286Link to BLAST:NP_001271286.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271286.1 676 Q8IUZ0-4 676 100% 0 0

Chromosomal Locations for CCDS 61694.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 70873206 70873223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70893584 70893640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70895849 70895936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70900922 70901024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70904552 70904755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70911532 70911598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70919050 70919193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70936761 70936822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70963785 70963932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70980101 70980184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70984094 70984257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71008379 71008616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71009807 71009992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71012804 71012913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71037179 71037332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71049409 71049612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2031 nt):
ATGGATTGCCAAGCTGAGGTGAACTGCGGGCTTCATCTGGTTATTCAAACATCATCGCTTCCTGAAAAAA
ACAAAGTTGAATTCAAGCTAAATAAAGACACATCGTCATTCCCCGGTAGACTTTTACAACATGACCTTGA
AAGAAACTACTCAAGTAGGCAAGGTGATCATATTAATTTGGTGAGCTCATCATTGTCATCATTTCCTATT
CTTCAACGTTCTTCTGAAGAGAAAATTCTTTACTCAGACAGGTTGAGCCTAGAAAGACAAAAGCTGACCG
TATGTCCTATCATCAATGGGGAAGACCACCTTCGTTTGTTGAACTTTCAACACAATTTTATAACTCGGAT
ACAAAATATTTCTAATCTACAGAAGTTAATATCGTTGGATTTATATGATAACCAGATTGAAGAAATTAGT
GGGCTTTCGACTCTGAGATGTCTTCGTGTCCTTCTGTTGGGGAAAAACAGAATCAAGAAAATCTCAAATC
TGGAGAATCTAAAAAGCTTAGATGTCTTGGATCTTCATGGAAATCAGATTACCAAAATTGAAAATATTAA
TCATTTGTGTGAGTTGAGAGTTTTAAATCTTGCCAGGAACTTTTTAAGTCATGTTGATAATCTTAATGGG
CTGGATTCACTAACTGAACTTAACTTGCGACACAATCAAATCACTTTCGTGAGAGATGTGGATAATTTGC
CCTGCCTCCAACATCTCTTTCTCAGCTTTAACAATATATCTAGTTTTGACAGTGTTTCCTGCCTTGCTGA
CTCTTCTTCCCTCTCGGACATCACCTTTGATGGCAATCCCATAGCTCAAGAGTCATGGTACAAACACACT
GTCCTTCAGAATATGATGCAGCTGCGCCAGCTAGATATGAAGAGAATCACGGAAGAAGAAAGGCGTATGG
CATCTGTTTTAGCCAAAAAAGAGGAAGAGAAGAAGCGGGAAAGTCATAAACAATCTTTGCTTAAGGAGAA
GAAAAGGTTAACAATTAACAACGTAGCTCGACAGTGGGACTTGCAACAACAACGAGTAGCCAATATTGCT
ACAAATGAAGATAGAAAAGATTCTGACTCTCCTCAGGACCCCTGTCAGATTGATGGAAGCACCCTCTCTG
CATTCCCAGAGGAAACAGGGCCTCTAGACTCAGGACTCAACAATGCTTTACAAGGTTTATCTGTCATAGA
CACATACCTTGTTGAAGTGGACGGGGATACACTTTCCCTATATGGCTCAGGAGCACTGGAATCTCTGGAT
AGGAATTGGAGTGTTCAAACAGCAGGAATGATCACAACAGTCTCCTTCACTTTCATAGAATTTGATGAAA
TCGTCCAAGTGCTTCCTAAACTGAAGATTAAGTTTCCTAATTCTCTGCACCTTAAATTCAAGGAAACAAA
TCTTGTAATGCTGCAGCAATTTAACGCACTAGCCCAACTCCGTCGTATTGACCAGTTGACAATTGATCCT
CAAGGAAATCCAGTTGTCAATTTTACACTCTGGAAATACTATGTACTGTTTAGGCTAAGCCATTTCAGTA
TGCAGAAAATAAATGGAACAGAGGTGACACAGAATGATATGATAATGGCTGAAAGGCTCTTTGGAATCCT
AGCACATGTAGCATCTTCTGAGTTACCCCAGTATCGTCTGATTTCCATTCTGGGTGATGCCAGGAAAAAG
CAATTTCGGTATCTACTAGAATCCAAAGGAAAAAAACCTGGTATTATCAACGAAGAAAATAATGACAGCA
AAAGACTTGTAGGAGAAAACACAAATCGTGCTACATTAAATTATACTACAAGAGACTTTTATAATGAAAA
GCTAGAGGAAATAAAGGAAAAGAAGAAATTCTGTAAAACATATATAGAAGACCTTGTGAAGGAAGCCACA
GAAATCAACATGAAAAATGAGGCTTTGCAGAAGCTTTGGCCACAGATGTTCATTGAGCTTGTTAGGGATG
CAGTCATAGAAATTCGCAATAAAAATTCCTATATGAAGCTCTGCCTACAGCAGATAACAGACCAAAAATA
A

Translation (676 aa):
MDCQAEVNCGLHLVIQTSSLPEKNKVEFKLNKDTSSFPGRLLQHDLERNYSSRQGDHINLVSSSLSSFPI
LQRSSEEKILYSDRLSLERQKLTVCPIINGEDHLRLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEIS
GLSTLRCLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNG
LDSLTELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQESWYKHT
VLQNMMQLRQLDMKRITEEERRMASVLAKKEEEKKRESHKQSLLKEKKRLTINNVARQWDLQQQRVANIA
TNEDRKDSDSPQDPCQIDGSTLSAFPEETGPLDSGLNNALQGLSVIDTYLVEVDGDTLSLYGSGALESLD
RNWSVQTAGMITTVSFTFIEFDEIVQVLPKLKIKFPNSLHLKFKETNLVMLQQFNALAQLRRIDQLTIDP
QGNPVVNFTLWKYYVLFRLSHFSMQKINGTEVTQNDMIMAERLFGILAHVASSELPQYRLISILGDARKK
QFRYLLESKGKKPGIINEENNDSKRLVGENTNRATLNYTTRDFYNEKLEEIKEKKKFCKTYIEDLVKEAT
EINMKNEALQKLWPQMFIELVRDAVIEIRNKNSYMKLCLQQITDQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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