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Report for CCDS28419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28419.1 Public Mus musculus 17 Fpr2 23 108 98 CCDS HistoryNCBI Gene:14289Re-query CCDS DB by CCDS ID:28419.1Re-query CCDS DB by GeneID:14289See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28419.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064068.4 ENSMUSP00000065799.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064068.4Link to Ensembl Protein Viewer:ENSMUSP00000065799.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000064068Re-query CCDS DB by Protein ID:ENSMUSP00000065799
Original member Current member NCBI NM_008039.2 NP_032065.1 Accepted alive Link to Nucleotide Sequence:NM_008039.2Link to Protein Sequence:NP_032065.1Re-query CCDS DB by Nucleotide ID:NM_008039Re-query CCDS DB by Protein ID:NP_032065Link to BLAST:NP_032065.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032065.1 351 O88536 351 100% 0 0

Chromosomal Locations for CCDS 28419.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 17892744 17893799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGGAATCCAACTACTCCATCCATCTGAATGGATCAGAAGTGGTGGTTTATGATTCTACCATCTCCAGAG
TTCTGTGGATCCTCTCAATGGTGGTTGTCTCCATCACTTTCTTCCTTGGTGTGCTGGGCAATGGACTAGT
GATTTGGGTAGCTGGATTCCGGATGCCACACACTGTCACCACTATCTGGTATCTGAATCTAGCATTGGCT
GACTTTTCTTTCACAGCAACTCTACCATTCCTTCTTGTTGAAATGGCTATGAAAGAAAAATGGCCTTTTG
GCTGGTTCCTGTGTAAATTAGTTCACATTGTGGTAGATGTAAACCTGTTTGGAAGTGTCTTCTTGATTGC
TCTCATTGCCTTGGACCGCTGCATTTGTGTTCTGCATCCAGTCTGGGCTCAGAACCACCGCACTGTGAGC
CTGGCTAGGAAGGTGGTTGTTGGGCCCTGGATTTTTGCTCTGATTCTCACTTTGCCCATTTTTATTTTCT
TGACTACTGTTAGAATTCCTGGAGGAGATGTGTATTGTACATTCAACTTTGGATCCTGGGCTCAAACTGA
TGAAGAAAAGTTGAACACAGCTATCACTTTTGTAACAACTAGAGGGATCATCAGGTTCCTTATTGGTTTC
AGCATGCCCATGTCAATTGTTGCTGTTTGCTATGGACTCATTGCTGTCAAGATCAACAGAAGAAACCTTG
TTAATTCCAGCCGTCCTTTACGAGTCCTTACAGCAGTTGTGGCTTCCTTCTTTATCTGCTGGTTTCCCTT
TCAGCTTGTGGCCCTTTTGGGCACAGTCTGGTTTAAAGAGACATTGCTTAGTGGTAGTTATAAAATTCTT
GACATGTTTGTTAACCCAACAAGCTCATTGGCTTACTTCAATAGTTGTCTCAATCCGATGCTCTATGTTT
TCATGGGCCAGGACTTTCGTGAGAGATTTATTCATTCCCTGCCTTATAGTCTTGAGAGAGCCCTGAGTGA
GGATTCTGGTCAAACCAGTGATTCAAGCACCAGTTCTACTTCACCTCCTGCAGACATTGAGTTAAAGGCC
CCATGA

Translation (351 aa):
MESNYSIHLNGSEVVVYDSTISRVLWILSMVVVSITFFLGVLGNGLVIWVAGFRMPHTVTTIWYLNLALA
DFSFTATLPFLLVEMAMKEKWPFGWFLCKLVHIVVDVNLFGSVFLIALIALDRCICVLHPVWAQNHRTVS
LARKVVVGPWIFALILTLPIFIFLTTVRIPGGDVYCTFNFGSWAQTDEEKLNTAITFVTTRGIIRFLIGF
SMPMSIVAVCYGLIAVKINRRNLVNSSRPLRVLTAVVASFFICWFPFQLVALLGTVWFKETLLSGSYKIL
DMFVNPTSSLAYFNSCLNPMLYVFMGQDFRERFIHSLPYSLERALSEDSGQTSDSSTSSTSPPADIELKA
P


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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