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Report for CCDS54329.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54329.1 Public Homo sapiens 19 ZNF135 24 110 108 CCDS HistoryNCBI Gene:7694Re-query CCDS DB by CCDS ID:54329.1Re-query CCDS DB by GeneID:7694See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54329.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000401053.8 ENSP00000441410.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401053.8Link to Ensembl Protein Viewer:ENSP00000441410.1Re-query CCDS DB by Nucleotide ID:ENST00000401053Re-query CCDS DB by Protein ID:ENSP00000441410
Original member Current member NCBI NM_007134.1 NP_009065.1 Accepted alive Link to Nucleotide Sequence:NM_007134.1Link to Protein Sequence:NP_009065.1Re-query CCDS DB by Nucleotide ID:NM_007134Re-query CCDS DB by Protein ID:NP_009065Link to BLAST:NP_009065.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009065.1 682 P52742-4 682 100% 0 0

Chromosomal Locations for CCDS 54329.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58059242 58059310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58061580 58061706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58063446 58063541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58066705 58068461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2049 nt):
ATGGAGTTAGGCTCGCGCCGGCGCAGTGTCGGCTGCCGGTGCCGCGGCCTTTGTCTCGCAGTCAGGAGGG
AG
CAAGTGACGTTTGAGGACGTGGTAGTGGGCTTCAGCCAGGAGGAGTGGGGGCAGCTGAAGCCTGCCCA
G
AGGACCCTGTACCGTGATGTAATGCTGGACACCTTCAGGCTTCTGGTCTCTGTGGGACATTGGTTACCG
AAG
CCGAATGTCATCTCCCTGCTGGAGCAAGAGGCAGAGCTGTGGGCGGTGGAGTCTAGACTTCCCCAAG
GC
GTGTACCCAGAGATTAAGGGACATTTCCAGTTTTTGCTTCTTTCAGACTTGGAAACTAGACCCAAAGT
C
AAACTGTCAGTTCTAAAGCAAGGCATCTCTGAAGAAATATCCAACAGTGTCATCTTGGTAGAAAGATTC
CTG
TGGGATGGTCTGTGGTACTGCAGGGGTGAGGACACTGAGGGCCACTGGGAATGGAGTTGTGAGAGTC
TA
GAGAGCCTGGCAGTGCCGGTGGCCTTCACGCCTGTGAAGACGCCTGTTCTGGAGCAGTGGCAGAGGAA
T
GGGTTTGGGGAAAACATAAGTCTGAACCCTGATCTCCCACATCAACCAATGACTCCTGAAAGACAAAGC
CCC
CACACATGGGGAACACGTGGAAAAAGGGAGAAGCCAGACCTAAATGTTTTACAGAAAACCTGTGTAA
AA
GAGAAACCCTACAAATGTCAGGAATGCGGAAAGGCCTTTAGTCACAGCTCAGCACTTATCGAACACCA
C
CGGACGCACACAGGAGAGAGACCTTACGAATGTCACGAATGCTTAAAAGGCTTCCGGAACAGCTCGGCA
CTT
ACCAAACACCAGAGAATCCATACTGGGGAGAAACCCTATAAATGCACTCAGTGTGGGAGGACCTTCA
AC
CAAATTGCCCCACTGATCCAGCACCAGAGAACTCACACAGGTGAGAAGCCCTATGAATGCAGCGAATG
T
GGGAAATCCTTCAGTTTTAGGTCCTCCTTCAGCCAGCACGAGCGAACTCACACAGGCGAGAAGCCCTAC
GAG
TGCAGTGAGTGTGGGAAAGCCTTCCGGCAAAGCATCCACCTCACCCAGCATCTGCGAATCCACACTG
GG
GAGAAACCCTATCAGTGTGGTGAGTGTGGCAAGGCCTTCAGCCACAGCTCATCCTTGACCAAACACCA
G
CGAATCCACACAGGGGAGAAGCCCTACGAGTGCCATGAGTGTGGAAAAGCCTTCACCCAGATCACACCA
CTG
ATTCAGCACCAGAGGACCCACACAGGAGAAAAGCCCTATGAGTGTGGTGAGTGTGGGAAAGCCTTCA
GT
CAGAGCACACTCCTGACCGAGCATCGGAGGATTCACACAGGAGAGAAGCCCTATGGATGCAACGAGTG
T
GGGAAAACCTTCAGCCACAGCTCCTCACTCAGCCAGCATGAGCGGACACACACAGGAGAGAAGCCCTAT
GAG
TGCAGTCAGTGTGGGAAGGCCTTCCGGCAGAGCACACACCTCACCCAACACCAGCGAATCCACACAG
GG
GAGAAGCCCTATGAATGCAATGACTGCGGCAAGGCATTCAGTCACAGCTCGTCCCTCACCAAACATCA
G
CGAATCCACACTGGGGAGAAGCCCTACGAATGCAACCAGTGTGGCAGAGCCTTCAGCCAGCTTGCTCCC
CTC
ATTCAGCATCAGAGGATCCACACAGGAGAGAAACCCTATGAATGTAACCAGTGTGGCAGAGCCTTCA
GC
CAGAGCTCCCTTCTCATCGAACACCAGAGGATTCACACCAAGGAAAAGCCGTATGGGTGCAATGAGTG
T
GGGAAATCCTTCAGCCACAGCTCCTCGCTCAGCCAGCACGAAAGGACGCACACTGGGGAAAAGCCCTAT
GAG
TGTCACGATTGCGGAAAGTCCTTTAGGCAGAGCACCCACCTCACTCAGCACCGGAGGATCCACACAG
GA
GAGAAGCCATATGCATGCAGGGACTGTGGAAAGGCCTTTACCCACAGCTCCTCCCTTACCAAGCACCA
G
AGAACTCACACTGGATAA


Translation (682 aa):
MELGSRRRSVGCRCRGLCLAVRREQVTFEDVVVGFSQEEWGQLKPAQRTLYRDVMLDTFRLLVSVGHWLP
K
PNVISLLEQEAELWAVESRLPQGVYP
EIKGHFQFLLLSDLETRPKVKLSVLKQGISEEISNSVILVERF
L
WDGLWYCRGEDTEGHWEWSCESLESLAVPVAFTPVKTPVLEQWQRNGFGENISLNPDLPHQPMTPERQS
P
HTWGTRGKREKPDLNVLQKTCVKEKPYKCQECGKAFSHSSALIEHHRTHTGERPYECHECLKGFRNSSA
L
TKHQRIHTGEKPYKCTQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPY
E
CSECGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECHECGKAFTQITP
L
IQHQRTHTGEKPYECGECGKAFSQSTLLTEHRRIHTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKPY
E
CSQCGKAFRQSTHLTQHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRIHTGEKPYECNQCGRAFSQLAP
L
IQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPY
E
CHDCGKSFRQSTHLTQHRRIHTGEKPYACRDCGKAFTHSSSLTKHQRTHTG




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser