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Report for CCDS16559.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16559.1 Public Mus musculus 2 Fmn1 23 108 98 CCDS HistoryNCBI Gene:14260Re-query CCDS DB by CCDS ID:16559.1Re-query CCDS DB by GeneID:14260See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16559.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102547.9 ENSMUSP00000099606.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102547.9Link to Ensembl Protein Viewer:ENSMUSP00000099606.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000102547Re-query CCDS DB by Protein ID:ENSMUSP00000099606
Original member Current member NCBI NM_010230.2 NP_034360.2 Accepted alive Link to Nucleotide Sequence:NM_010230.2Link to Protein Sequence:NP_034360.2Re-query CCDS DB by Nucleotide ID:NM_010230Re-query CCDS DB by Protein ID:NP_034360Link to BLAST:NP_034360.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034360.2 1466 Q05860-1 1466 100% 0 0

Chromosomal Locations for CCDS 16559.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 113363957 113365829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113429637 113429812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113444342 113444459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113478902 113478963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113525151 113525941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113529313 113529463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113563283 113563370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113582098 113582159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113584031 113584119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113593087 113593216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113595023 113595169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113596333 113596392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113599569 113599676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113603169 113603289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113636732 113636824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113688109 113688160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113693009 113693158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113707863 113707947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113709416 113709460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4401 nt):
ATGGAAGGCACTCACTGCACCCTCCAGCTGCATAACCCCATTGCCGAACTCTGCTATATCAGCTTCTATC
TTCCAAAAGGGGAAGTCAGAGGATTTTCATACAAGGGCACTGTAACTCTAGACAGATCCAATAACGCTTT
CCATAACTGCTACCAAGTCAGGGAGGGGCCAGACATCACCAGCCTCAGCCAGCAGCCAAACGAACATCCA
GGCGACATATTTTTCAAACAGACTCCCACAAAAAACATCCTGACAGAGCTATACAAGCTCACAGCAGAGA
AGGAGAGGCTGCTGGACAGTCTGCTGAGGTCAGACAACATCCTCGGTGTTTCAATGGGGAGCCAGGAGGG
AAAGTTGCAGGAGCTGTCAGTAATCCTTGCCACTGGGGATGAGTATTTCCAGAGTGCTGGCAACTGGCGC
AGAGAACTCCCTGTGAGCTCTCTCATTAGGAGGAGCACCCAAGAGAACAAAAAGCCCCGGAGGTCTGGCA
GGAGGAGAGAGAGCCCGGAGGAGCTCCGGCAGAAGAGAACCAGGAGGAAAGGGCGTGGCTGCCAGGAGTC
AGCATTTCAGATGGGGAAGGACCAGGTCTGTTCCAGTAGCTCCCTTTCTTTTCGAGCTCGGCCTAATCTC
CGGCTCCTAGAAGAAAGAGGAAATTTAGTTCCTCGGGGAACGCTTACCTCTTCGCTACGGAGAAGAGAGA
GCTGCCCAGCCAACATCCTCAGGACACCGGATGCAGACCTGGCCTTCGGAAACTCTGGGAGAACCTCAGA
GGACACTGATCTTGAAGGACCTCTGTCCCCTGACAGCAGCCCCACTGAGGTAGGAGATGCTGATGTGGGA
GGGCAGCTCAAGAGTTCTCACCAGCAGGAGCCCCCACAACCAAATGTGTCTGAAAGCCATGGGAAACATG
CAGGGGCAGAGAGGTGGAGCAGCAGGACTCGGAAGTCAAAGTCATTGGAGAGGACTTGCAGTAAGAAACC
TGTTTCCAAAGTGGTGGCCAAGATTCAGGAACCATCTGCCCCAGTAAAACGAATAGTTAGGGCGCATCAT
GACGGCAAGGGAAGGGTTGCCTATGGCCCAGAGACCCAAACTGAGTTTATCCCAAAAGCTGACTTCCTCA
CCCTCCCAGGAGGTGAAACTGAGACTCATAGTTCCGGGAGGCTGGAGGAGGAGCAGCCAGGGATCAAGTC
ATTGCGGTCCTCAGCCCCAGAAAGAGCCTCCATTACCAAAGAACCAGCCAGCACCGAGGCCGCTGTGAAC
AAGGTTCTCCGCAAGGTGATAGAGAGTGAGAAGTTAGACGAAGCTACAGAGGGGAAAAGGTTGGGCTTCT
CTCTCAACACAAGGGCCACCCACACTTTCCCAGAAACTCGAAGCCAAAGGAAGGCTGGGCTACCGCAGAG
TGGCCATAAATTCTTGCTTCTGGATCTGCCGCACACGGTAGGTCCTGATTCCCCACAACCCAAATGCGAT
GAGAAGAAGCCAACCCCCCAGGTTCCAACAGCTCTTGGCATGGTATTTAATAATTCATCGCCTCAGTCCA
GCGCACACAAACGGCTGTCACCTGTTCCCTCGCCTCTGTCTCCAAGGTGTCCCAGTCCACAGCAGCATCA
TAGGATCCTTCTGCTCCCACCACTGCCTAGTGAGGGAGAAGTTGTTTTTAATGAGTACCCTAGTAGAAAG
AACGACGTCTCCTCTGGGTTCCCCTCTGCTGACACCTTGGAGCCATCATCTACTACGAAGGTCACGGAGA
CCAAAGGAGCCAGCCCGACTTCCCTCAGAGCAAGCCAAACTTGGCTGGTGTCTGAGGAAGCTTCCGAAAA
AGGCTTGGGGCCAGAGAAGATCACAGCTCCACCCCAGCACCAGTTGCCACCAGGTATTGCCTCTGAAGGC
TTTCCCTGTGACAACTTCAAAGAGCAGACGGCAAAAGACCTTCCCAATAAGGATGGAGGGGTTTGGGTCC
CTGGTTACAGAGCCGGACCACCCTGTCCATTTCTGCTCCATGAAGAGAAAGAGAAGACAAGTAGAAGTGA
ATTGTACTTGGATCTCAACCCTGACCAGAGCCCCACAGAGCAGGACGACAGGACTCCAGGCAGACTCCAA
GCTGTCTGGCCACCCCCAAAGACAAAGGACACAGAAGAAAAAGTGGGACTGAAGTACACTGAAGCAGAAT
ACCAGGCTGCTATCCTACATCTGAAGAGGGAGCACAAAGAAGAAATCGAAACCCTGCAGGCTCAGTTTGA
ACTCAAGACATTTCACATCCGGGGTGAGCACGCATTAGTAACAGCAAGACTTGAAGAAGCCATTGAAAAT
CTCAAGCAACAGTTAGGAAAGCGCCGGGAAGGATGTGAAGAGATGAGAGATGTGTGCATTTCCACAGATG
ATGACTGCTCTCCAAAGGCTTTCAGAAATGTGTGCATCCAGACAGACAGAGAGACCTTCCTCAAGCCCTG
TGATGCTGAAAGCAAAGCAACCAGAAGCAGCCAGATAGTACCCAAGAAGCTGACTATCTCCTTAACCCAG
CTCTCTCCCTCAAAAGACAGCAAAGACATCCACGCCCCATTCCAGACAAGAGAAGGCACCTCCTCATCTA
GTCAGCATAAGATATCCCCTCCAGCTCCCCCCACGCCACCACCACTCCCTCCACCTCTCATTCCTCCACC
TCCGCCCCTCCCACCTGGACTTGGACCTTTGCCTCCAGCACCACCCATACCACCTGTGTGTCCTGTGTCG
CCACCGCCACCTCCTCCGCCTCCTCCTCCAACTCCCGTGCCTCCAAGTGATGGACCACCACCACCACCAC
CTCCTCCACCACCACTTCCCAATGTCCTAGCTCTTCCTAACAGTGGAGGTCCTCCTCCTCCTCCACCTCC
TCCTCCGCCAGGACTTGCACCCCCACCTCCTCCTGGACTGTCCTTTGGACTCAGCTCTTCTTCCAGCCAG
TATCCTCGTAAACCAGCCATTGAGCCCAGCTGTCCTATGAAACCTTTGTATTGGACCAGAATACAAATAA
ATGATAAAAGCCAAGACGCCGCACCAACTTTATGGGACTCCTTAGAAGAGCCTCATATTAGGGACACAAG
TGAATTTGAATATTTATTCTCCAAGGACACAACTCAACAGAAGAAAAAACCCCTGTCAGAGGCCTACGAA
AAGAAGAACAAAGTCAAAAAGATCATCAAGTTATTGGATGGAAAGCGATCTCAAACTGTGGGAATCTTGA
TATCTAGTTTACATCTAGAAATGAAAGATATTCAACAGGCCATATTTACTGTGGATGACTCCGTGGTTGA
CCTGGAGACCTTAGCAGCCTTATATGAAAATCGAGCCCAGGAGGATGAACTGACTAAAATAAGAAAGTAC
TATGAGACATCCAAAGAAGAAGACTTGAAACTGCTGGACAAACCTGAACAATTTTTGCATGAGTTAGCCC
AGATTCCCAATTTTGCCGAACGTGCCCAGTGCATAATCTTCAGGGCTGTATTTTCTGAGGGTATCACATC
CTTACATCGAAAAGTAGAGATTGTCACACGGGCCTCGAAGGGCTTGTTGCACATGAAGAGTGTGAAGGAT
ATCTTAGCTCTCATTCTGGCTTTTGGAAACTACATGAATGGAGGAAACAGGACGCGAGGGCAAGCAGACG
GATATAGTTTAGAAATTCTGCCCAAACTCAAAGACGTCAAAAGTCGGGACAATGGGATGAATCTGGTGGA
CTATGTTGTGAAGTACTACCTGCGATACTATGATCAGTGCAAACATCATGACCAAGAAGCAAGTTGCAGA
GGAAAGGATTTATTCAGCTTATACTTCCACATTGCTGTTCATCCCCAAAGGAAGTCAGGACTGGAACTCA
AGCAGGAAGCTGGAACAGACAAGAGTGTTTTCCCGCTGCCTGAACCACAGGATTTCTTCCTGGCCTCTCA
AGTCAAGTTTGAAGACCTCCTAAAGGATTTGAGGAAGCTGAAGCGTCAACTAGAAGCAAGTGAGCAACAG
ATGAAGCTGGTGTGCAAGGAGTCCCCAAGGGAGTACCTGCAGCCTTTCAAGGACAAACTGGAGGAGTTCT
TCAAGAAAGCCAAAAAAGAGCACAAGATGGAAGAAAGTCACTTGGAGAATGCACAGAAAAGTTTTGAAAC
AACAGTGGGATATTTTGGAATGAAGCCAAAGACTGGAGAGAAGGAGGTCACCCCCAGCTATGTGTTTATG
GTGTGGTTTGAGTTCTGCAGTGACTTCAAGACCATTTGGAAGCGGGAGAGTAAGAACATATCTAAAGAAA
GATTGAAAATGGCTCAGGCATCCGTCAGCAAACTGACATCAGAGAAGAAAGTGGAGACAAAGAAAATCAA
TCCCACCGCTAGTCTGAAAGAAAGACTGCGTCAGAAGGAAGCCAGCGTGGCCACCAACTAA

Translation (1466 aa):
MEGTHCTLQLHNPIAELCYISFYLPKGEVRGFSYKGTVTLDRSNNAFHNCYQVREGPDITSLSQQPNEHP
GDIFFKQTPTKNILTELYKLTAEKERLLDSLLRSDNILGVSMGSQEGKLQELSVILATGDEYFQSAGNWR
RELPVSSLIRRSTQENKKPRRSGRRRESPEELRQKRTRRKGRGCQESAFQMGKDQVCSSSSLSFRARPNL
RLLEERGNLVPRGTLTSSLRRRESCPANILRTPDADLAFGNSGRTSEDTDLEGPLSPDSSPTEVGDADVG
GQLKSSHQQEPPQPNVSESHGKHAGAERWSSRTRKSKSLERTCSKKPVSKVVAKIQEPSAPVKRIVRAHH
DGKGRVAYGPETQTEFIPKADFLTLPGGETETHSSGRLEEEQPGIKSLRSSAPERASITKEPASTEAAVN
KVLRKVIESEKLDEATEGKRLGFSLNTRATHTFPETRSQRKAGLPQSGHKFLLLDLPHTVGPDSPQPKCD
EKKPTPQVPTALGMVFNNSSPQSSAHKRLSPVPSPLSPRCPSPQQHHRILLLPPLPSEGEVVFNEYPSRK
NDVSSGFPSADTLEPSSTTKVTETKGASPTSLRASQTWLVSEEASEKGLGPEKITAPPQHQLPPGIASEG
FPCDNFKEQTAKDLPNKDGGVWVPGYRAGPPCPFLLHEEKEKTSRSELYLDLNPDQSPTEQDDRTPGRLQ
AVWPPPKTKDTEEKVGLKYTEAEYQAAILHLKREHKEEIETLQAQFELKTFHIRGEHALVTARLEEAIEN
LKQQLGKRREGCEEMRDVCISTDDDCSPKAFRNVCIQTDRETFLKPCDAESKATRSSQIVPKKLTISLTQ
LSPSKDSKDIHAPFQTREGTSSSSQHKISPPAPPTPPPLPPPLIPPPPPLPPGLGPLPPAPPIPPVCPVS
PPPPPPPPPPTPVPPSDGPPPPPPPPPPLPNVLALPNSGGPPPPPPPPPPGLAPPPPPGLSFGLSSSSSQ
YPRKPAIEPSCPMKPLYWTRIQINDKSQDAAPTLWDSLEEPHIRDTSEFEYLFSKDTTQQKKKPLSEAYE
KKNKVKKIIKLLDGKRSQTVGILISSLHLEMKDIQQAIFTVDDSVVDLETLAALYENRAQEDELTKIRKY
YETSKEEDLKLLDKPEQFLHELAQIPNFAERAQCIIFRAVFSEGITSLHRKVEIVTRASKGLLHMKSVKD
ILALILAFGNYMNGGNRTRGQADGYSLEILPKLKDVKSRDNGMNLVDYVVKYYLRYYDQCKHHDQEASCR
GKDLFSLYFHIAVHPQRKSGLELKQEAGTDKSVFPLPEPQDFFLASQVKFEDLLKDLRKLKRQLEASEQQ
MKLVCKESPREYLQPFKDKLEEFFKKAKKEHKMEESHLENAQKSFETTVGYFGMKPKTGEKEVTPSYVFM
VWFEFCSDFKTIWKRESKNISKERLKMAQASVSKLTSEKKVETKKINPTASLKERLRQKEASVATN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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