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Report for CCDS30941.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30941.1 Public Homo sapiens 1 GPR52 24 110 108 CCDS HistoryNCBI Gene:9293Re-query CCDS DB by CCDS ID:30941.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30941.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367685.5 ENSP00000356658.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367685.5Link to Ensembl Protein Viewer:ENSP00000356658.2Re-query CCDS DB by Nucleotide ID:ENST00000367685Re-query CCDS DB by Protein ID:ENSP00000356658
Original member Current member NCBI NM_005684.5 NP_005675.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005684.5Link to Protein Sequence:NP_005675.3Re-query CCDS DB by Nucleotide ID:NM_005684Re-query CCDS DB by Protein ID:NP_005675Link to BLAST:NP_005675.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005675.3 361 Q9Y2T5 361 100% 0 0

Chromosomal Locations for CCDS 30941.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 174448112 174449197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1086 nt):
ATGAATGAATCCAGGTGGACTGAATGGAGGATCCTGAACATGAGCAGTGGCATTGTGAATGTGTCCGAGC
GTCACTCCTGCCCACTTGGATTTGGCCACTACAGTGTGGTGGATGTCTGCATCTTCGAGACAGTGGTTAT
TGTGTTGCTGACATTTCTGATCATTGCTGGGAATCTAACAGTTATCTTTGTCTTTCATTGTGCTCCACTG
TTACATCATTATACTACCAGCTATTTCATTCAGACGATGGCATATGCTGATCTTTTCGTTGGAGTTAGCT
GCTTGGTTCCTACTCTGTCACTTCTCCACTACTCCACAGGTGTCCACGAGTCATTGACTTGCCAGGTTTT
TGGATATATCATCTCAGTTCTAAAAAGTGTTTCTATGGCATGTCTTGCTTGCATCAGTGTGGATCGTTAT
CTTGCAATAACCAAGCCTCTTTCCTACAATCAACTGGTCACCCCTTGTCGCTTGAGAATTTGCATTATTT
TGATCTGGATCTACTCCTGCCTAATTTTCTTGCCTTCCTTTTTTGGCTGGGGGAAACCTGGTTACCATGG
TGACATTTTTGAATGGTGTGCCACGTCTTGGCTCACCAGTGCCTATTTTACTGGCTTTATTGTTTGTTTA
CTTTATGCTCCTGCTGCCTTTGTTGTCTGCTTCACTTACTTCCACATTTTCAAAATTTGCCGTCAGCACA
CCAAAGAGATAAATGACCGAAGAGCCCGATTCCCTAGTCATGAGGTAGATTCTTCCAGAGAGACTGGACA
CAGCCCTGACCGTCGCTACGCCATGGTTTTGTTTAGGATAACCAGTGTATTTTATATGCTGTGGCTCCCC
TATATAATTTACTTTCTTCTAGAAAGCTCCCGGGTCTTGGACAATCCAACTCTGTCCTTCTTAACAACCT
GGCTTGCAATAAGTAATAGTTTTTGTAACTGTGTAATATACAGCCTCTCCAACAGCGTTTTCCGGCTAGG
CCTCCGAAGACTGTCTGAGACAATGTGCACATCCTGTATGTGTGTGAAGGATCAGGAAGCACAAGAACCC
AAACCTAGGAAACGGGCTAATTCTTGCTCCATTTGA

Translation (361 aa):
MNESRWTEWRILNMSSGIVNVSERHSCPLGFGHYSVVDVCIFETVVIVLLTFLIIAGNLTVIFVFHCAPL
LHHYTTSYFIQTMAYADLFVGVSCLVPTLSLLHYSTGVHESLTCQVFGYIISVLKSVSMACLACISVDRY
LAITKPLSYNQLVTPCRLRICIILIWIYSCLIFLPSFFGWGKPGYHGDIFEWCATSWLTSAYFTGFIVCL
LYAPAAFVVCFTYFHIFKICRQHTKEINDRRARFPSHEVDSSRETGHSPDRRYAMVLFRITSVFYMLWLP
YIIYFLLESSRVLDNPTLSFLTTWLAISNSFCNCVIYSLSNSVFRLGLRRLSETMCTSCMCVKDQEAQEP
KPRKRANSCSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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