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Report for CCDS1420.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1420.1 Public Homo sapiens 1 GPR37L1 24 110 108 CCDS HistoryNCBI Gene:9283Re-query CCDS DB by CCDS ID:1420.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1420.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367282.6 ENSP00000356251.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367282.6Link to Ensembl Protein Viewer:ENSP00000356251.4Re-query CCDS DB by Nucleotide ID:ENST00000367282Re-query CCDS DB by Protein ID:ENSP00000356251
Original member Current member NCBI NM_004767.5 NP_004758.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004767.5Link to Protein Sequence:NP_004758.3Re-query CCDS DB by Nucleotide ID:NM_004767Re-query CCDS DB by Protein ID:NP_004758Link to BLAST:NP_004758.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004758.3 481 O60883 481 100% 0 0

Chromosomal Locations for CCDS 1420.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 202122964 202123593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 202127741 202128556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1446 nt):
ATGCGGTGGCTGTGGCCCCTGGCTGTCTCTCTTGCTGTGATTTTGGCTGTGGGGCTAAGCAGGGTCTCTG
GGGGTGCCCCCCTGCACCTGGGCAGGCACAGAGCCGAGACCCAGGAGCAGCAGAGCCGATCCAAGAGGGG
CACCGAGGATGAGGAGGCCAAGGGCGTGCAGCAGTATGTGCCTGAGGAGTGGGCGGAGTACCCCCGGCCC
ATTCACCCTGCTGGCCTGCAGCCAACCAAGCCCTTGGTGGCCACCAGCCCTAACCCCGGCAAGGATGGGG
GCACCCCAGACAGTGGGCAGGAACTGAGGGGCAATCTGACAGGAGCACCAGGGCAGAGGCTACAGATCCA
GAACCCCCTGTATCCGGTGACCGAGAGCTCCTACAGTGCCTATGCCATCATGCTTCTGGCGCTGGTGGTG
TTTGCGGTGGGCATTGTGGGCAACCTGTCGGTCATGTGCATCGTGTGGCACAGCTACTACCTGAAGAGTG
CCTGGAACTCCATCCTTGCCAGCCTGGCCCTCTGGGATTTTCTGGTCCTCTTTTTCTGCCTCCCTATTGT
CATCTTCAACGAGATCACCAAGCAGAGGCTACTGGGTGACGTTTCTTGTCGTGCCGTGCCCTTCATGGAG
GTCTCCTCTCTGGGAGTCACGACTTTCAGCCTCTGTGCCCTGGGCATTGACCGCTTCCACGTGGCCACCA
GCACCCTGCCCAAGGTGAGGCCCATCGAGCGGTGCCAATCCATCCTGGCCAAGTTGGCTGTCATCTGGGT
GGGCTCCATGACGCTGGCTGTGCCTGAGCTCCTGCTGTGGCAGCTGGCACAGGAGCCTGCCCCCACCATG
GGCACCCTGGACTCATGCATCATGAAACCCTCAGCCAGCCTGCCCGAGTCCCTGTATTCACTGGTGATGA
CCTACCAGAACGCCCGCATGTGGTGGTACTTTGGCTGCTACTTCTGCCTGCCCATCCTCTTCACAGTCAC
CTGCCAGCTGGTGACATGGCGGGTGCGAGGCCCTCCAGGGAGGAAGTCAGAGTGCAGGGCCAGCAAGCAC
GAGCAGTGTGAGAGCCAGCTCAACAGCACCGTGGTGGGCCTGACCGTGGTCTACGCCTTCTGCACCCTCC
CAGAGAACGTCTGCAACATCGTGGTGGCCTACCTCTCCACCGAGCTGACCCGCCAGACCCTGGACCTCCT
GGGCCTCATCAACCAGTTCTCCACCTTCTTCAAGGGCGCCATCACCCCAGTGCTGCTCCTTTGCATCTGC
AGGCCGCTGGGCCAGGCCTTCCTGGACTGCTGCTGCTGCTGCTGCTGTGAGGAGTGCGGCGGGGCTTCGG
AGGCCTCTGCTGCCAATGGGTCGGACAACAAGCTCAAGACCGAGGTGTCCTCTTCCATCTACTTCCACAA
GCCCAGGGAGTCACCCCCACTCCTGCCCCTGGGCACACCTTGCTGA

Translation (481 aa):
MRWLWPLAVSLAVILAVGLSRVSGGAPLHLGRHRAETQEQQSRSKRGTEDEEAKGVQQYVPEEWAEYPRP
IHPAGLQPTKPLVATSPNPGKDGGTPDSGQELRGNLTGAPGQRLQIQNPLYPVTESSYSAYAIMLLALVV
FAVGIVGNLSVMCIVWHSYYLKSAWNSILASLALWDFLVLFFCLPIVIFNEITKQRLLGDVSCRAVPFME
VSSLGVTTFSLCALGIDRFHVATSTLPKVRPIERCQSILAKLAVIWVGSMTLAVPELLLWQLAQEPAPTM
GTLDSCIMKPSASLPESLYSLVMTYQNARMWWYFGCYFCLPILFTVTCQLVTWRVRGPPGRKSECRASKH
EQCESQLNSTVVGLTVVYAFCTLPENVCNIVVAYLSTELTRQTLDLLGLINQFSTFFKGAITPVLLLCIC
RPLGQAFLDCCCCCCCEECGGASEASAANGSDNKLKTEVSSSIYFHKPRESPPLLPLGTPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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