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Report for CCDS12866.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12866.1 Public Homo sapiens 19 MYADM 24 110 108 CCDS HistoryNCBI Gene:91663Re-query CCDS DB by CCDS ID:12866.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12866.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391768.2 ENSP00000375648.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391768.2Link to Ensembl Protein Viewer:ENSP00000375648.2Re-query CCDS DB by Nucleotide ID:ENST00000391768Re-query CCDS DB by Protein ID:ENSP00000375648
Original member Current member EBI ENST00000391769.2 ENSP00000375649.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391769.2Link to Ensembl Protein Viewer:ENSP00000375649.2Re-query CCDS DB by Nucleotide ID:ENST00000391769Re-query CCDS DB by Protein ID:ENSP00000375649
Original member Current member EBI ENST00000391770.9 ENSP00000375650.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000391770.9Link to Ensembl Protein Viewer:ENSP00000375650.4Re-query CCDS DB by Nucleotide ID:ENST00000391770Re-query CCDS DB by Protein ID:ENSP00000375650
Original member Current member EBI ENST00000391771.1 ENSP00000375651.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391771.1Link to Ensembl Protein Viewer:ENSP00000375651.1Re-query CCDS DB by Nucleotide ID:ENST00000391771Re-query CCDS DB by Protein ID:ENSP00000375651
Original member Current member EBI ENST00000421337.6 ENSP00000398269.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421337.6Link to Ensembl Protein Viewer:ENSP00000398269.2Re-query CCDS DB by Nucleotide ID:ENST00000421337Re-query CCDS DB by Protein ID:ENSP00000398269
Original member Current member NCBI NM_001020818.2 NP_001018654.1 Accepted alive Link to Nucleotide Sequence:NM_001020818.2Link to Protein Sequence:NP_001018654.1Re-query CCDS DB by Nucleotide ID:NM_001020818Re-query CCDS DB by Protein ID:NP_001018654Link to BLAST:NP_001018654.1
Original member Current member NCBI NM_001020819.3 NP_001018655.1 Accepted alive Link to Nucleotide Sequence:NM_001020819.3Link to Protein Sequence:NP_001018655.1Re-query CCDS DB by Nucleotide ID:NM_001020819Re-query CCDS DB by Protein ID:NP_001018655Link to BLAST:NP_001018655.1
Original member Current member NCBI NM_001020820.3 NP_001018656.1 Accepted alive Link to Nucleotide Sequence:NM_001020820.3Link to Protein Sequence:NP_001018656.1Re-query CCDS DB by Nucleotide ID:NM_001020820Re-query CCDS DB by Protein ID:NP_001018656Link to BLAST:NP_001018656.1
Original member Current member NCBI NM_001020821.2 NP_001018657.1 Accepted alive Link to Nucleotide Sequence:NM_001020821.2Link to Protein Sequence:NP_001018657.1Re-query CCDS DB by Nucleotide ID:NM_001020821Re-query CCDS DB by Protein ID:NP_001018657Link to BLAST:NP_001018657.1
Original member Current member NCBI NM_001290188.2 NP_001277117.1 Accepted alive Link to Nucleotide Sequence:NM_001290188.2Link to Protein Sequence:NP_001277117.1Re-query CCDS DB by Nucleotide ID:NM_001290188Re-query CCDS DB by Protein ID:NP_001277117Link to BLAST:NP_001277117.1
Original member Current member NCBI NM_001290189.1 NP_001277118.1 Accepted alive Link to Nucleotide Sequence:NM_001290189.1Link to Protein Sequence:NP_001277118.1Re-query CCDS DB by Nucleotide ID:NM_001290189Re-query CCDS DB by Protein ID:NP_001277118Link to BLAST:NP_001277118.1
Original member Current member NCBI NM_001290190.2 NP_001277119.1 Accepted alive Link to Nucleotide Sequence:NM_001290190.2Link to Protein Sequence:NP_001277119.1Re-query CCDS DB by Nucleotide ID:NM_001290190Re-query CCDS DB by Protein ID:NP_001277119Link to BLAST:NP_001277119.1
Original member Current member NCBI NM_001290191.2 NP_001277120.1 Accepted alive Link to Nucleotide Sequence:NM_001290191.2Link to Protein Sequence:NP_001277120.1Re-query CCDS DB by Nucleotide ID:NM_001290191Re-query CCDS DB by Protein ID:NP_001277120Link to BLAST:NP_001277120.1
Original member Current member NCBI NM_001290192.2 NP_001277121.1 Accepted alive Link to Nucleotide Sequence:NM_001290192.2Link to Protein Sequence:NP_001277121.1Re-query CCDS DB by Nucleotide ID:NM_001290192Re-query CCDS DB by Protein ID:NP_001277121Link to BLAST:NP_001277121.1
Original member Current member NCBI NM_001290193.2 NP_001277122.1 Accepted alive Link to Nucleotide Sequence:NM_001290193.2Link to Protein Sequence:NP_001277122.1Re-query CCDS DB by Nucleotide ID:NM_001290193Re-query CCDS DB by Protein ID:NP_001277122Link to BLAST:NP_001277122.1
Original member Current member NCBI NM_001290194.2 NP_001277123.1 Accepted alive Link to Nucleotide Sequence:NM_001290194.2Link to Protein Sequence:NP_001277123.1Re-query CCDS DB by Nucleotide ID:NM_001290194Re-query CCDS DB by Protein ID:NP_001277123Link to BLAST:NP_001277123.1
Original member Current member NCBI NM_138373.5 NP_612382.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138373.5Link to Protein Sequence:NP_612382.1Re-query CCDS DB by Nucleotide ID:NM_138373Re-query CCDS DB by Protein ID:NP_612382Link to BLAST:NP_612382.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018654.1 322 Q96S97 322 100% 0 0
NP_001018655.1 322 Q96S97 322 100% 0 0
NP_001018656.1 322 Q96S97 322 100% 0 0
NP_001018657.1 322 Q96S97 322 100% 0 0
NP_001277117.1 322 Q96S97 322 100% 0 0
NP_001277118.1 322 Q96S97 322 100% 0 0
NP_001277119.1 322 Q96S97 322 100% 0 0
NP_001277120.1 322 Q96S97 322 100% 0 0
NP_001277121.1 322 Q96S97 322 100% 0 0
NP_001277122.1 322 Q96S97 322 100% 0 0
NP_001277123.1 322 Q96S97 322 100% 0 0
NP_612382.1 322 Q96S97 322 100% 0 0

Chromosomal Locations for CCDS 12866.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53873530 53874498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGCCAGTGACGGTAACCCGCACCACCATCACAACCACCACGACGTCATCTTCGGGCCTGGGGTCCCCCA
TGATCGTGGGGTCCCCTCGGGCCCTGACACAGCCCCTGGGTCTCCTTCGCCTGCTGCAGCTGGTGTCTAC
CTGCGTGGCCTTCTCGCTGGTGGCTAGCGTGGGCGCCTGGACGGGGTCCATGGGCAACTGGTCCATGTTC
ACCTGGTGCTTCTGCTTCTCCGTGACCCTGATCATCCTCATCGTGGAGCTGTGCGGGCTCCAGGCCCGCT
TCCCCCTGTCTTGGCGCAACTTCCCCATCACCTTCGCCTGCTATGCGGCCCTCTTCTGCCTCTCGGCCTC
CATCATCTACCCCACCACCTATGTCCAGTTCCTGTCCCACGGCCGTTCGCGGGACCACGCCATCGCCGCC
ACCTTCTTCTCCTGCATCGCGTGTGTGGCTTACGCCACCGAAGTGGCCTGGACCCGGGCCCGGCCCGGCG
AGATCACTGGCTATATGGCCACCGTACCCGGGCTGCTGAAGGTGCTGGAGACCTTCGTTGCCTGCATCAT
CTTCGCGTTCATCAGCGACCCCAACCTGTACCAGCACCAGCCGGCCCTGGAGTGGTGCGTGGCGGTGTAC
GCCATCTGCTTCATCCTAGCGGCCATCGCCATCCTGCTGAACCTGGGGGAGTGCACCAACGTGCTACCCA
TCCCCTTCCCCAGCTTCCTGTCGGGGCTGGCCTTGCTGTCTGTCCTCCTCTATGCCACCGCCCTTGTTCT
CTGGCCCCTCTACCAGTTCGATGAGAAGTATGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGCTGCAGC
CGCAGCCATGCCTACTACGTGTGTGCCTGGGACCGCCGACTGGCTGTGGCCATCCTGACGGCCATCAACC
TACTGGCGTATGTGGCTGACCTGGTGCACTCTGCCCACCTGGTTTTTGTCAAGGTCTAA

Translation (322 aa):
MPVTVTRTTITTTTTSSSGLGSPMIVGSPRALTQPLGLLRLLQLVSTCVAFSLVASVGAWTGSMGNWSMF
TWCFCFSVTLIILIVELCGLQARFPLSWRNFPITFACYAALFCLSASIIYPTTYVQFLSHGRSRDHAIAA
TFFSCIACVAYATEVAWTRARPGEITGYMATVPGLLKVLETFVACIIFAFISDPNLYQHQPALEWCVAVY
AICFILAAIAILLNLGECTNVLPIPFPSFLSGLALLSVLLYATALVLWPLYQFDEKYGGQPRRSRDVSCS
RSHAYYVCAWDRRLAVAILTAINLLAYVADLVHSAHLVFVKV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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