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Report for CCDS31663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31663.1 Public Homo sapiens 11 MSANTD4 24 110 108 CCDS HistoryNCBI Gene:84437Re-query CCDS DB by CCDS ID:31663.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31663.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301919.9 ENSP00000304713.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301919.9Link to Ensembl Protein Viewer:ENSP00000304713.4Re-query CCDS DB by Nucleotide ID:ENST00000301919Re-query CCDS DB by Protein ID:ENSP00000304713
Original member Current member NCBI NM_001318747.1 NP_001305676.1 Accepted alive Link to Nucleotide Sequence:NM_001318747.1Link to Protein Sequence:NP_001305676.1Re-query CCDS DB by Nucleotide ID:NM_001318747Re-query CCDS DB by Protein ID:NP_001305676Link to BLAST:NP_001305676.1
Original member Current member NCBI NM_001318748.1 NP_001305677.1 Accepted alive Link to Nucleotide Sequence:NM_001318748.1Link to Protein Sequence:NP_001305677.1Re-query CCDS DB by Nucleotide ID:NM_001318748Re-query CCDS DB by Protein ID:NP_001305677Link to BLAST:NP_001305677.1
Original member Current member NCBI NM_001318749.1 NP_001305678.1 Accepted alive Link to Nucleotide Sequence:NM_001318749.1Link to Protein Sequence:NP_001305678.1Re-query CCDS DB by Nucleotide ID:NM_001318749Re-query CCDS DB by Protein ID:NP_001305678Link to BLAST:NP_001305678.1
Original member Current member NCBI NM_001318750.1 NP_001305679.1 Accepted alive Link to Nucleotide Sequence:NM_001318750.1Link to Protein Sequence:NP_001305679.1Re-query CCDS DB by Nucleotide ID:NM_001318750Re-query CCDS DB by Protein ID:NP_001305679Link to BLAST:NP_001305679.1
Original member Current member NCBI NM_032424.3 NP_115800.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032424.3Link to Protein Sequence:NP_115800.1Re-query CCDS DB by Nucleotide ID:NM_032424Re-query CCDS DB by Protein ID:NP_115800Link to BLAST:NP_115800.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305676.1 345 Q8NCY6 345 100% 0 0
NP_001305677.1 345 Q8NCY6 345 100% 0 0
NP_001305678.1 345 Q8NCY6 345 100% 0 0
NP_001305679.1 345 Q8NCY6 345 100% 0 0
NP_115800.1 345 Q8NCY6 345 100% 0 0

Chromosomal Locations for CCDS 31663.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 106009535 106010110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 106010456 106010917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGAAGCAGTTGAAAAGAAAAAGGAAAAGCAATTTTAGTGTTCAAGAAACTCAGACCCTTTTGAAAGAAA
TT
ACGAAAAGGAAAGAAGTCATTTTTTCCAAGCAGCTCAATACAACAATTAATGTGATGAAGCGAATGGC
T
TGGGAAGAGATTGCACAGTGTGTGAATGCTGTAGGAGAAGGAGAACAGAGGACAGGGACAGAGGTGAAA
AGA
AGGTACCTTGACTGGCGAGCACTTATGAAGAGAAAGAGGATGAAGGCCAACATTAAGCTGGTTGGTT
CA
GGATTTCCCCTTCCCTCCTCTGATTTGGATGACTCTCTCACTGAAGAGATAGATGAAAAGATTGGATT
C
CGAAATGATGCAAATTTTGACTGGCAAAATGTGGCAGATTTCAGGGATGCAGGTGGATCCTTAACTGAG
GTC
AAGGTGGAAGAGGAAGAAAGGGATCCGCAGAGTCCTGAATTTGAAATTGAGGAGGAGGAAGAAATGT
TG
TCATCCGTCATACCAGATTCCAGGAGAGAAAATGAACTTCCCGATTTCCCCCACATTGATGAGTTTTT
T
ACCCTTAACTCAACACCATCTAGATCTGCATATGATGAGCCTCATTTGCTCGTAAATATTGAGAAACAG
AAA
CTAGAGTTGGAAAAACGACGACTGGATATCGAGGCCGAAAGGCTGCAGGTAGAAAAGGAACGCCTAC
AA
ATCGAGAAAGAGAGGCTGCGGCATTTAGACATGGAACATGAGCGGCTTCAGCTAGAGAAGGAGCGGCT
G
CAGATTGAAAGAGAAAAGTTGAGGTTACAGATAGTCAATTCAGAGAAACCGTCCTTGGAAAATGAACTT
GGT
CAAGGAGAAAAATCCATGCTTCAACCACAGGACATAGAAACAGAGAAGTTAAAACTTGAGCGAGAAC
GC
TTGCAACTGGAAAAGGATAGGCTGCAGTTTTTGAAGTTTGAATCTGAGAAGCTGCAGATTGAAAAGGA
A
CGCTTACAGGTAGAGAAAGACAGACTTCGAATTCAGAAAGAAGGACACTTGCAGTGA


Translation (345 aa):
MKQLKRKRKSNFSVQETQTLLKEITKRKEVIFSKQLNTTINVMKRMAWEEIAQCVNAVGEGEQRTGTEVK
R
RYLDWRALMKRKRMKANIKLVGSGFPLPSSDLDDSLTEEIDEKIGFRNDANFDWQNVADFRDAGGSLTE
V
KVEEEERDPQSPE
FEIEEEEEMLSSVIPDSRRENELPDFPHIDEFFTLNSTPSRSAYDEPHLLVNIEKQ
K
LELEKRRLDIEAERLQVEKERLQIEKERLRHLDMEHERLQLEKERLQIEREKLRLQIVNSEKPSLENEL
G
QGEKSMLQPQDIETEKLKLERERLQLEKDRLQFLKFESEKLQIEKERLQVEKDRLRIQKEGHLQ




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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